Comparison of KIAA cDNA sequences between mouse and human (KIAA0048)

<< Original sequence data >>

mouse  mKIAA0048 (mid07066)     length:   3004 bp
human   KIAA0048  (ha01311)     length:   3288 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      282       253       29      10.28
  CDS2 :     1546      1374      172      11.13
  Total:     1828      1627      201      11.00

  3'UTR:     1099       898      201      18.29

amino acid

  CDS1 :       94        90        4       4.26
  CDS2 :      516       482       34       6.59
  Total:      610       572       38       6.23
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse    42 -   323      3 -   323     14 -   107
         human   320 -   601    272 -  2155     17 -   110
  CDS2 : mouse   327 -  1874    327 -  1874      1 -   516
         human   605 -  2155    272 -  2155    112 -   628
  3'UTR: mouse  1875 -  3004
         human  2156 -  3288
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
            14 D  P  Q  M  S  M  A  A  T  A  A  V  S  P  S  D  Y  30
mid07066    42 GATCCACAGATGAGCATGGCCGCCACTGCTGCTGTCAGTCCCAGTGACTA 91
               ||||||||||  |||||||| |||||||||||||| ||||||||||||||
ha01311    320 GATCCACAGACCAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACTA 369
            17 D  P  Q  T  S  M  A  A  T  A  A  V  S  P  S  D  Y  33

            51 ----+----*----+----*----+----*----+----*----+----* 100
            31  L  Q  P  A  A  A  T  T  Q  D  S  Q  P  S  P  L  A 47
mid07066    92 CCTGCAGCCTGCTGCTGCTACTACCCAGGACTCCCAGCCATCTCCCTTGG 141
               |||||||||||| ||  | || |||||||||||||||||||||||||| |
ha01311    370 CCTGCAGCCTGCCGCCTCCACCACCCAGGACTCCCAGCCATCTCCCTTAG 419
            34  L  Q  P  A  A  S  T  T  Q  D  S  Q  P  S  P  L  A 50

           101 ----+----*----+----*----+----*----+----*----+----* 150
            48   L  L  A  A  T  C  S  K  I  G  P  P  A  V  E  A   63
mid07066   142 CCCTGCTTGCTGCGACATGTAGCAAAATTGGCCCCCCAGCTGTTGAAGCT 191
               ||||||||||||| |||||||||||||||||||| ||||| |||||||||
ha01311    420 CCCTGCTTGCTGCAACATGTAGCAAAATTGGCCCTCCAGCAGTTGAAGCT 469
            51   L  L  A  A  T  C  S  K  I  G  P  P  A  V  E  A   66

           151 ----+----*----+----*----+----*----+----*----+----* 200
            64 A  V  T  P  P  A  P  P  Q  P  T  P  R  K  L  V  P  80
mid07066   192 GCAGTGACACCTCCTGCTCCCCCCCAGCCTACCCCAAGGAAACTGGTCCC 241
               || |||||||||||||||||||| ||||| || ||  ||||||| |||||
ha01311    470 GCTGTGACACCTCCTGCTCCCCCACAGCCCACACCGCGGAAACTTGTCCC 519
            67 A  V  T  P  P  A  P  P  Q  P  T  P  R  K  L  V  P  83

           201 ----+----*----+----*----+----*----+----*----+----* 250
            81  I  K  P  A  P  L  P  L  S  P  C  K  N  S  F  S  I 97
mid07066   242 TATCAAACCCGCTCCTCTCCCTCTCAGTCCCTGCAAGAATAGCTTTAGCA 291
               ||||||||| || |||||||||||||| ||| |||||||||||||| | |
ha01311    520 TATCAAACCTGCCCCTCTCCCTCTCAGCCCCGGCAAGAATAGCTTTGGAA 569
            84  I  K  P  A  P  L  P  L  S  P  G  K  N  S  F  G  I 100

           251 ----+----*----+----*----+----*-- 282
            98   L  S  S  K  G  N  I  L  Q  I   107
mid07066   292 TCTTATCATCTAAAGGAAATATACTTCAGATT 323
               |||| || || |||||||||||||||||||||
ha01311    570 TCTTGTCCTCCAAAGGAAATATACTTCAGATT 601
           101   L  S  S  K  G  N  I  L  Q  I   110



*--[ CDS2 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 G  S  Q  L  S  T  S  Y  P  G  G  Q  F  V  F  A  I  17
mid07066   327 GGCTCCCAGCTGAGTACCTCCTACCCTGGAGGGCAGTTTGTGTTTGCAAT 376
               || || || |||||  ||||||| |||||||||||| | ||||| || ||
ha01311    605 GGGTCACAACTGAGCGCCTCCTATCCTGGAGGGCAGCTGGTGTTCGCTAT 654
           112 G  S  Q  L  S  A  S  Y  P  G  G  Q  L  V  F  A  I  128

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  Q  N  P  T  L  I  N  K  G  S  R  S  N  A  S  I  Q 34
mid07066   377 CCAGAACCCCACCCTGATCAACAAAGGGAGCCGATCAAATGCAAGTATCC 426
               |||||| |||||| ||||||||||||||| |||||||||||| | |||||
ha01311    655 CCAGAATCCCACCATGATCAACAAAGGGACCCGATCAAATGCCAATATCC 704
           129  Q  N  P  T  M  I  N  K  G  T  R  S  N  A  N  I  Q 145

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   Y  Q  .  V  P  Q  I  Q  G  N  S  S  Q  T  I  Q   49
mid07066   427 AGTACCAA...GTCCCTCAGATCCAAGGGAACAGTTCCCAGACCATCCAG 473
               |||||||    ||||||||||| || |  | || |||||| |||||||| 
ha01311    705 AGTACCAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAA 754
           146   Y  Q  A  V  P  Q  I  Q  A  S  N  S  Q  T  I  Q   161

           151 ----+----*----+----*----+----*----+----*----+----* 200
            50 V  Q  P  S  L  T  N  Q  I  Q  V  I  P  G  T  N  Q  66
mid07066   474 GTGCAGCCCAGTCTCACCAACCAGATCCAGGTCATCCCAGGCACCAACCA 523
               || ||||||| ||||||||||||||||||| ||||||| |||||||||||
ha01311    755 GTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCA 804
           162 V  Q  P  N  L  T  N  Q  I  Q  I  I  P  G  T  N  Q  178

           201 ----+----*----+----*----+----*----+----*----+----* 250
            67  A  I  T  T  P  S  T  S  G  H  K  P  V  P  I  K  P 83
mid07066   524 AGCCATCACCACCCCGTCAACATCTGGTCATAAGCCTGTCCCCATCAAGC 573
               |||||||| |||||| ||| | ||  |||| |||||||||||||||||||
ha01311    805 AGCCATCATCACCCCCTCACCGTCCAGTCACAAGCCTGTCCCCATCAAGC 854
           179  A  I  I  T  P  S  P  S  S  H  K  P  V  P  I  K  P 195

           251 ----+----*----+----*----+----*----+----*----+----* 300
            84   A  P  V  Q  K  S  S  T  T  T  T  P  V  Q  S  G   99
mid07066   574 CAGCTCCTGTCCAGAAGTCAAGTACGACTACCACCCCTGTGCAGAGCGGG 623
               |||| ||  |||||||||| |||||||| |||||||| ||||||||||||
ha01311    855 CAGCCCCCATCCAGAAGTCGAGTACGACCACCACCCCCGTGCAGAGCGGG 904
           196   A  P  I  Q  K  S  S  T  T  T  T  P  V  Q  S  G   211

           301 ----+----*----+----*----+----*----+----*----+----* 350
           100 A  N  V  V  K  L  T  G  G  G  S  N  M  T  L  T  L  116
mid07066   624 GCCAACGTGGTGAAGCTGACAGGCGGGGGTAGCAACATGACGCTCACCCT 673
               ||||| ||||||||| ||||||| |||||  ||||  |||||||||| ||
ha01311    905 GCCAATGTGGTGAAGTTGACAGGTGGGGGCGGCAATGTGACGCTCACTCT 954
           212 A  N  V  V  K  L  T  G  G  G  G  N  V  T  L  T  L  228

           351 ----+----*----+----*----+----*----+----*----+----* 400
           117  P  L  N  N  L  V  N  T  S  D  I  G  G  P  A  Q  L 133
mid07066   674 GCCGCTCAACAACCTGGTGAACACCAGCGATATTGGGGGCCCTGCTCAGC 723
               |||  |||||||||| |||||| |||| || |  |||| |||| ||||||
ha01311    955 GCCCGTCAACAACCTCGTGAACGCCAGTGACACCGGGGCCCCTACTCAGC 1004
           229  P  V  N  N  L  V  N  A  S  D  T  G  A  P  T  Q  L 245

           401 ----+----*----+----*----+----*----+----*----+----* 450
           134   L  T  E  S  P  P  T  P  L  S  K  T  N  K  K  A   149
mid07066   724 TCCTCACTGAGAGCCCCCCCACCCCACTGTCTAAGACTAACAAGAAAGCT 773
               |||||||||| |||||||| ||||||||||||||||||||||||||||| 
ha01311   1005 TCCTCACTGAAAGCCCCCCAACCCCACTGTCTAAGACTAACAAGAAAGCA 1054
           246   L  T  E  S  P  P  T  P  L  S  K  T  N  K  K  A   261

           451 ----+----*----+----*----+----*----+----*----+----* 500
           150 R  K  K  S  L  P  V  S  Q  P  S  V  A  V  A  E  Q  166
mid07066   774 AGGAAGAAGAGCCTCCCTGTGTCACAGCCATCCGTAGCTGTGGCTGAGCA 823
               |||||||||||||| ||||  || |||||  | || ||||||||||||||
ha01311   1055 AGGAAGAAGAGCCTTCCTGCCTCCCAGCCCCCTGTGGCTGTGGCTGAGCA 1104
           262 R  K  K  S  L  P  A  S  Q  P  P  V  A  V  A  E  Q  278

           501 ----+----*----+----*----+----*----+----*----+----* 550
           167  V  E  T  V  L  I  E  T  T  A  D  N  I  I  Q  A  G 183
mid07066   824 GGTGGAGACGGTGCTGATAGAGACCACGGCAGACAACATCATCCAGGCAG 873
               |||||||||||||||||| |||||||| || |||||||||||||||||||
ha01311   1105 GGTGGAGACGGTGCTGATCGAGACCACCGCGGACAACATCATCCAGGCAG 1154
           279  V  E  T  V  L  I  E  T  T  A  D  N  I  I  Q  A  G 295

           551 ----+----*----+----*----+----*----+----*----+----* 600
           184   N  N  L  L  I  V  Q  S  P  G  G  G  Q  P  A  V   199
mid07066   874 GAAACAACCTGCTGATCGTCCAGAGCCCTGGCGGGGGCCAGCCAGCTGTG 923
               |||| |||||||| || || ||||||||||| ||||||||||||||||||
ha01311   1155 GAAATAACCTGCTCATTGTTCAGAGCCCTGGTGGGGGCCAGCCAGCTGTG 1204
           296   N  N  L  L  I  V  Q  S  P  G  G  G  Q  P  A  V   311

           601 ----+----*----+----*----+----*----+----*----+----* 650
           200 V  Q  Q  V  Q  V  V  P  P  K  A  E  Q  Q  Q  V  V  216
mid07066   924 GTCCAGCAAGTCCAGGTGGTGCCACCCAAGGCTGAGCAGCAGCAGGTGGT 973
               |||||||| |||||||||||||| |||||||| |||||||||||||||||
ha01311   1205 GTCCAGCAGGTCCAGGTGGTGCCCCCCAAGGCCGAGCAGCAGCAGGTGGT 1254
           312 V  Q  Q  V  Q  V  V  P  P  K  A  E  Q  Q  Q  V  V  328

           651 ----+----*----+----*----+----*----+----*----+----* 700
           217  Q  I  P  Q  Q  A  L  R  V  V  Q  A  A  S  A  T  L 233
mid07066   974 CCAGATCCCCCAGCAGGCACTGCGGGTGGTGCAAGCTGCCTCTGCCACCC 1023
                ||||||||||||||||| |||||||||||||| || || ||||||||||
ha01311   1255 ACAGATCCCCCAGCAGGCTCTGCGGGTGGTGCAGGCGGCATCTGCCACCC 1304
           329  Q  I  P  Q  Q  A  L  R  V  V  Q  A  A  S  A  T  L 345

           701 ----+----*----+----*----+----*----+----*----+----* 750
           234   P  T  V  P  Q  K  P  S  Q  N  F  Q  I  Q  T  T   249
mid07066  1024 TCCCCACCGTCCCCCAGAAGCCCTCTCAGAACTTTCAGATCCAGACAACT 1073
               ||||||| || |||||||||||||| |||||||||||||||||| || ||
ha01311   1305 TCCCCACTGTACCCCAGAAGCCCTCCCAGAACTTTCAGATCCAGGCAGCT 1354
           346   P  T  V  P  Q  K  P  S  Q  N  F  Q  I  Q  A  A   361

           751 ----+----*----+----*----+----*----+----*----+----* 800
           250 E  P  T  P  T  Q  V  Y  I  R  T  P  S  G  E  V  Q  266
mid07066  1074 GAACCAACACCAACCCAGGTTTATATCCGTACACCTTCTGGTGAGGTACA 1123
               || || ||||| || ||||| || ||||| || ||||| |||||||| ||
ha01311   1355 GAGCCGACACCTACTCAGGTCTACATCCGCACGCCTTCCGGTGAGGTGCA 1404
           362 E  P  T  P  T  Q  V  Y  I  R  T  P  S  G  E  V  Q  378

           801 ----+----*----+----*----+----*----+----*----+----* 850
           267  T  V  L  V  Q  D  S  P  P  A  T  A  A  T  T  S  T 283
mid07066  1124 GACAGTCCTTGTCCAGGACAGCCCCCCAGCAACAGCTGCAACCACATCAA 1173
               |||||||||||||||||||||||||||||||||||||||| |||| || |
ha01311   1405 GACAGTCCTTGTCCAGGACAGCCCCCCAGCAACAGCTGCAGCCACCTCTA 1454
           379  T  V  L  V  Q  D  S  P  P  A  T  A  A  A  T  S  N 395

           851 ----+----*----+----*----+----*----+----*----+----* 900
           284   V  T  C  N  S  P  A  L  R  A  P  H  L  S  G  T   299
mid07066  1174 CCGTCACCTGTAACAGCCCTGCACTCCGAGCTCCCCATCTGAGTGGCACC 1223
                |  |||||||| ||||||||||  ||| ||||||||||||||||| |||
ha01311   1455 ACACCACCTGTAGCAGCCCTGCATCCCGTGCTCCCCATCTGAGTGGGACC 1504
           396   T  T  C  S  S  P  A  S  R  A  P  H  L  S  G  T   411

           901 ----+----*----+----*----+----*----+----*----+----* 950
           300 S  K  K  H  S  A  A  I  L  R  K  E  R  P  L  P  K  316
mid07066  1224 AGCAAAAAACATTCAGCTGCCATTCTCCGAAAAGAGCGGCCCCTGCCAAA 1273
               |||||||| || |||||||| ||||||||||||||||| |||||||||||
ha01311   1505 AGCAAAAAGCACTCAGCTGCAATTCTCCGAAAAGAGCGTCCCCTGCCAAA 1554
           412 S  K  K  H  S  A  A  I  L  R  K  E  R  P  L  P  K  428

           951 ----+----*----+----*----+----*----+----*----+----* 1000
           317  I  A  P  A  G  S  I  I  S  L  N  A  A  Q  L  A  A 333
mid07066  1274 GATTGCACCTGCTGGGAGCATCATCAGCCTGAACGCCGCACAGCTGGCAG 1323
               |||||| || || |||||||||||||||||||| || || ||| |||| |
ha01311   1555 GATTGCCCCAGCCGGGAGCATCATCAGCCTGAATGCAGCCCAGTTGGCGG 1604
           429  I  A  P  A  G  S  I  I  S  L  N  A  A  Q  L  A  A 445

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
           334   A  A  Q  A  M  Q  T  I  N  I  N  G  V  Q  V  Q   349
mid07066  1324 CAGCTGCTCAGGCCATGCAGACCATCAACATCAATGGTGTCCAAGTCCAG 1373
               ||||||| ||||| ||||||||||||||||||||||||||||| ||||||
ha01311   1605 CAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAG 1654
           446   A  A  Q  A  M  Q  T  I  N  I  N  G  V  Q  V  Q   461

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
           350 G  V  P  V  T  I  T  N  T  G  G  Q  Q  Q  L  T  V  366
mid07066  1374 GGTGTGCCTGTCACCATCACCAACACTGGCGGGCAGCAGCAGCTGACCGT 1423
               || ||||||||||||||||||||||| |||||||||||||||||||| ||
ha01311   1655 GGCGTGCCTGTCACCATCACCAACACAGGCGGGCAGCAGCAGCTGACAGT 1704
           462 G  V  P  V  T  I  T  N  T  G  G  Q  Q  Q  L  T  V  478

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
           367  Q  N  V  S  G  N  N  L  T  I  S  G  L  S  P  T  Q 383
mid07066  1424 GCAGAACGTTTCTGGAAACAACCTGACTATCAGTGGGCTGAGCCCCACCC 1473
               |||||| |||||||| ||||||||||| ||||||||||||||||||||||
ha01311   1705 GCAGAATGTTTCTGGGAACAACCTGACCATCAGTGGGCTGAGCCCCACCC 1754
           479  Q  N  V  S  G  N  N  L  T  I  S  G  L  S  P  T  Q 495

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
           384   I  Q  L  Q  M  E  Q  A  L  A  G  E  A  Q  P  G   399
mid07066  1474 AGATCCAGCTGCAGATGGAGCAGGCTCTAGCCGGAGAGGCCCAGCCTGGG 1523
               ||||||||||||| ||||| || || || ||||||||| ||||||| |||
ha01311   1755 AGATCCAGCTGCAAATGGAACAAGCCCTGGCCGGAGAGACCCAGCCCGGG 1804
           496   I  Q  L  Q  M  E  Q  A  L  A  G  E  T  Q  P  G   511

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
           400 E  K  R  R  R  M  A  C  T  C  P  N  C  K  D  G  E  416
mid07066  1524 GAGAAACGGCGGCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGA 1573
               ||||| ||||| ||||||||||||||||||||||||||||||||||||||
ha01311   1805 GAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGA 1854
           512 E  K  R  R  R  M  A  C  T  C  P  N  C  K  D  G  E  528

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
           417  K  R  S  G  E  Q  G  K  K  K  H  V  C  H  I  P  D 433
mid07066  1574 GAAGAGGTCTGGGGAGCAGGGCAAGAAGAAGCACGTGTGCCACATCCCGG 1623
               |||||||||||| ||||||||||||||||||||||| ||||||||||| |
ha01311   1855 GAAGAGGTCTGGAGAGCAGGGCAAGAAGAAGCACGTTTGCCACATCCCCG 1904
           529  K  R  S  G  E  Q  G  K  K  K  H  V  C  H  I  P  D 545

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
           434   C  G  K  T  F  R  K  T  S  L  L  R  A  H  V  R   449
mid07066  1624 ACTGCGGGAAGACTTTCCGGAAGACATCCTTGCTCCGGGCCCACGTCCGC 1673
               |||| || ||||| ||||| ||||| |||||||| || ||||| || |||
ha01311   1905 ACTGTGGCAAGACGTTCCGTAAGACGTCCTTGCTGCGTGCCCATGTGCGC 1954
           546   C  G  K  T  F  R  K  T  S  L  L  R  A  H  V  R   561

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
           450 L  H  T  G  E  R  P  F  V  C  N  W  F  F  C  G  K  466
mid07066  1674 CTGCACACTGGCGAGCGGCCCTTTGTCTGCAACTGGTTCTTCTGTGGAAA 1723
               ||||||||||||||||||||||||||||||||||||||||||||||| ||
ha01311   1955 CTGCACACTGGCGAGCGGCCCTTTGTCTGCAACTGGTTCTTCTGTGGGAA 2004
           562 L  H  T  G  E  R  P  F  V  C  N  W  F  F  C  G  K  578

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
           467  R  F  T  R  S  D  E  L  Q  R  H  A  R  T  H  T  G 483
mid07066  1724 GAGATTCACTCGGAGCGATGAACTCCAGCGACATGCTCGAACCCACACAG 1773
               ||| ||||| ||||| || || ||||| || |||||||| ||||||||||
ha01311   2005 GAGGTTCACACGGAGTGACGAGCTCCAACGGCATGCTCGCACCCACACAG 2054
           579  R  F  T  R  S  D  E  L  Q  R  H  A  R  T  H  T  G 595

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
           484   D  K  R  F  E  C  A  Q  C  Q  K  R  F  M  R  S   499
mid07066  1774 GGGACAAGCGCTTTGAGTGTGCCCAATGTCAGAAGCGCTTCATGAGGAGT 1823
               ||||||| ||||| ||||| ||||| ||||||||||||||||||||||||
ha01311   2055 GGGACAAACGCTTCGAGTGCGCCCAGTGTCAGAAGCGCTTCATGAGGAGT 2104
           596   D  K  R  F  E  C  A  Q  C  Q  K  R  F  M  R  S   611

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
           500 D  H  L  T  K  H  Y  K  T  H  L  G  T  K  G  L  *  516
mid07066  1824 GACCACCTCACCAAGCATTACAAGACCCACCTAGGCACGAAGGGCTTGTA 1873
               |||||||||||||||||||||||||||||||| | |||||||  ||||||
ha01311   2105 GACCACCTCACCAAGCATTACAAGACCCACCTGGTCACGAAGAACTTGTA 2154
           612 D  H  L  T  K  H  Y  K  T  H  L  V  T  K  N  L  *  628

          1551 - 1551
           516   516
mid07066  1874 A 1874
               |
ha01311   2155 A 2155
           628   628


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
mid07066  1875 GGCCAACTGAGGCAGGAGGCCCTGAAGATGGAACACCTCCCATCTGATTG 1924
               ||||||||| ||| |||||||||||||||| |   || | | | || |  
ha01311   2156 GGCCAACTGCGGCGGGAGGCCCTGAAGATGCAGTCCCCCACCTGTG.TCC 2204

            51 ----+----*----+----*----+----*----+----*----+----* 100
mid07066  1925 GCCCTGGGTCCATGATGGACAGGTGCCC.ACGACTGCCCTGGG.CAGCCC 1972
                ||||||| || || |||| ||| ||||   | ||||| |||| | ||||
ha01311   2205 TCCCTGGGCCCCTGGTGGAAAGGAGCCCTGTGGCTGCCTTGGGCCTGCCC 2254

           101 ----+----*----+----*----+----*----+----*----+----* 150
mid07066  1973 TCA.CCCCACTCCTGTTCTGTGGCTGTGTCCCTGCAGAGAGGGACTCTGT 2021
               ||| ||||||||||||||||   |  ||||||  |||  |||| ||||||
ha01311   2255 TCAGCCCCACTCCTGTTCTGCAAC..TGTCCCCACAGGAAGGGGCTCTGT 2302

           151 ----+----*----+----*----+----*----+----*----+----* 200
mid07066  2022 T.CCTGTGTTCTCCTCCTTCCAAA.......GGCTCTGCC.........C 2054
               | ||||| || |||||||||  ||       |||||||||         |
ha01311   2303 TCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCTGCCTTGGCCCTTC 2352

           201 ----+----*----+----*----+----*----+----*----+----* 250
mid07066  2055 CTCTCACCGTGAGCTCCTGGCCTGCCCAGGCCATGGACACTGGCCATGCC 2104
               | ||||||  ||||||| ||||||||||| |  |||||||||||| ||||
ha01311   2353 CCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCC 2402

           251 ----+----*----+----*----+----*----+----*----+----* 300
mid07066  2105 CAATGAGACGTTCTAACCCAGGACGCGTGGGGACCCTTATTTCCAAAGGA 2154
               |||||||||||||||| |||||||||||||| ||||||||||||||||||
ha01311   2403 CAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGA 2452

           301 ----+----*----+----*----+----*----+----*----+----* 350
mid07066  2155 AAAACATACATTTCACTCCGTCGAGGAGCAAAGTGAGCCCCCATCCCC.. 2202
               ||||||| ||||||||||||||||||||||||||||||||| | ||||  
ha01311   2453 AAAACATGCATTTCACTCCGTCGAGGAGCAAAGTGAGCCCCTACCCCCCA 2502

           351 ----+----*----+----*----+----*----+----*----+----* 400
mid07066  2203 ACCCCATCCCCTTCCTCAACACTGCCGGAGTCCCATTGTGCCATGCCCCC 2252
                ||| ||||||   | |||||||||||||||| | |  ||||||||||||
ha01311   2503 CCCCGATCCCCGCTCCCAACACTGCCGGAGTCGCGTCATGCCATGCCCCC 2552

           401 ----+----*----+----*----+----*----+----*----+----* 450
mid07066  2253 TCCCCCACCGTGCCTCCTTGTCCCCCTCAATTAAGTCCTCCTGGGCCGCT 2302
               || |   | |  ||||| || |||   |               |||| ||
ha01311   2553 TCTC...CTGCACCTCCCTGGCCCTGCC...............GGCCACT 2584

           451 ----+----*----+----*----+----*----+----*----+----* 500
mid07066  2303 AGGGACACCCAGGGGCCCTGTACCCAGCCTCCCACTGACACCCCCCACCG 2352
                 |||| ||| |||||                   || ||||| || | |
ha01311   2585 GTGGACGCCCTGGGGC..................TTGGCACCCACCTCTG 2616

           501 ----+----*----+----*----+----*----+----*----+----* 550
mid07066  2353 GGGAGGTGGGAGGCTGCCTCCACTCCA.CTGCCCAGCCCTGCCAC.GGCT 2400
               | ||     | |||  |||||||||||  |||||||||| |||||   ||
ha01311   2617 GAGAAACTCGGGGCCACCTCCACTCCATGTGCCCAGCCCCGCCACAACCT 2666

           551 ----+----*----+----*----+----*----+----*----+----* 600
mid07066  2401 CTCCTCCA.AACATTCCAACTTCCTATGAAAGGT.....CAGACGCCGAG 2444
               ||||||||  |||||||| ||   | | ||| ||     ||  | |||| 
ha01311   2667 CTCCTCCAGCACATTCCAGCTCTATTTAAAAAGTAAAGACACCCACCGAC 2716

           601 ----+----*----+----*----+----*----+----*----+----* 650
mid07066  2445 GACCTGCCCTCCCTCTTTTCTACGGAGAACGTTGCCTTATACTC...ACT 2491
                 |    || ||   ||||||| |||||||||||||||||||||   |||
ha01311   2717 TCCTGATCCCCCTCTTTTTCTATGGAGAACGTTGCCTTATACTCTCTACT 2766

           651 ----+----*----+----*----+----*----+----*----+----* 700
mid07066  2492 TCAGATGATG.ACACTGTGGAC.GTGTGTGCTTTAACCACATTTTATTTA 2539
               |||||||||| |||||||| || |||||||||||||  |  |||||||||
ha01311   2767 TCAGATGATGAACACTGTGTACTGTGTGTGCTTTAAAGAAGTTTTATTTA 2816

           701 ----+----*----+----*----+----*----+----*----+----* 750
mid07066  2540 ATTGCTCC...CTTCCTCTCTTTGCTAGACGCCTCCCCCTTGCTTGCATT 2586
               ||||||||   |||||| || ||| ||  | ||||||   ||| ||| ||
ha01311   2817 ATTGCTCCCTTCTTCCTTTCCTTGTTATTCACCTCCCTGATGCCTGCTTT 2866

           751 ----+----*----+----*----+----*----+----*----+----* 800
mid07066  2587 CAGTTTAGGGTTTTGGGGGCAATGCTGAGCATAGGAGGGTCTTTTTTTTT 2636
               ||||| ||||  |||||||||||| |||||||| ||              
ha01311   2867 CAGTTGAGGG..TTGGGGGCAATGATGAGCATATGA.............. 2900

           801 ----+----*----+----*----+----*----+----*----+----* 850
mid07066  2637 TTGCTATTTTTTTTCTCACTTTAACAATT..CTTTTCTAAATGACA...C 2681
                       |||||||||||| || |||||  |||||||||||||||   |
ha01311   2901 .......ATTTTTTCTCACTCTAGCAATTCCCTTTTCTAAATGACACAGC 2943

           851 ----+----*----+----*----+----*----+----*----+----* 900
mid07066  2682 ATTTCAACTCAAATCTGGACTCACCTGAGAACACCTTC.CATCCTG.ACC 2729
               |||| |||||||||||||| |||  | | | ||||| | ||||||| |||
ha01311   2944 ATTTAAACTCAAATCTGGATTCAGATAACAGCACCTGCACATCCTGCACC 2993

           901 ----+----*----+----*----+----*----+----*----+----* 950
mid07066  2730 CCGCCACGCCCTCATCTCC.........CCCTGCCCAAGCTCCAC.TGTG 2769
                |  | | | | | || ||         ||| |||||||||| || ||||
ha01311   2994 TCCTCCCTCTCCCTTCACCTCACCCCTGCCCGGCCCAAGCTCTACTTGTG 3043

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mid07066  2770 TACAGTGTATATTGTATAATAGACTATTGTGTCTAAGACATGTTTTAAAA 2819
               |||||||||||||||||||||||| ||||||||||  ||||| |||||||
ha01311   3044 TACAGTGTATATTGTATAATAGACAATTGTGTCTACTACATG.TTTAAAA 3092

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mid07066  2820 ACATATTGCTTGTTATTTTTGAGGCTTTTAAATTAAACAGAAATCCAACT 2869
               ||| ||||||||||||||||||||||||||||||||||| ||||||||||
ha01311   3093 ACACATTGCTTGTTATTTTTGAGGCTTTTAAATTAAACAAAAATCCAACT 3142

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mid07066  2870 TTA.TTTTCGTTGTAACTGCTTGAGG.ATGTTTTATTAATTAAGTGA.AG 2916
               ||| |||| ||||||||||||||||| ||||||||| |||||||||| ||
ha01311   3143 TTATTTTTAGTTGTAACTGCTTGAGGTATGTTTTATGAATTAAGTGACAG 3192

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mid07066  2917 ATTTGTTATCCTTTATTAACGATGTATTTTGTTGGTCAGTACTGGGCTGA 2966
               ||||||||||||||||||||   ||| |||||||||||| ||||||||||
ha01311   3193 ATTTGTTATCCTTTATTAAC...GTACTTTGTTGGTCAGCACTGGGCTGA 3239

          1151 ----+----*----+----*----+----*----+----*----+---- 1199
mid07066  2967 CAAAAA..GTTTCTTGCTAATAAATTTAGTTGCCCAAGGC......... 3004
               ||||||   |||||||||||||||||||||||||  ||||         
ha01311   3240 CAAAAATTTTTTCTTGCTAATAAATTTAGTTGCCTGAGGCAAAATCTTC 3288