FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4179.ptfa, 500 aa vs ./tmplib.26680 library 1768517 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.9341+/-0.00686; mu= 11.9197+/- 0.456 mean_var=235.4106+/-56.352, 0's: 0 Z-trim: 8 B-trim: 25 in 1/35 Lambda= 0.0836 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00123 ( 490 res) msj07117 ( 490) 822 112 1e-25 mKIAA1098 ( 193 res) mpk01986 ( 193) 334 52 3.4e-08 mKIAA0898 ( 1006 res) mbg05750 (1006) 240 42 0.0002 mKIAA0129 ( 453 res) msh25292 ( 453) 199 37 0.0041 >>mFLJ00123 ( 490 res) msj07117 (490 aa) initn: 956 init1: 440 opt: 822 Z-score: 554.0 bits: 112.0 E(): 1e-25 Smith-Waterman score: 940; 36.203% identity (39.423% ungapped) in 453 aa overlap (74-490:39-490) 50 60 70 80 90 100 mKIAA4 CLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIA : : :: :::. ::.::: ::..::.. mFLJ00 DEDEEEEVLEEDEEEELDPITQLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVI 10 20 30 40 50 60 110 120 130 140 150 160 mKIAA4 KQLQ-TVKR--KIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRPHTVVPMDDATQ .:.. : : .. ....: .:.: :.::: :.::.:..: :..:. :.:::.....: mFLJ00 RQMHPTPGRGSRVNEQGICPRHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQ 70 80 90 100 110 120 170 180 190 200 210 220 mKIAA4 EYKEKLQKCLEPLEQKLQEITCCKASEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQ ::: ::: .:::...:. . ::.::.. ::: ..:. . .:: .: : : ::: mFLJ00 EYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQ 130 140 150 160 170 180 230 240 250 260 270 280 mKIAA4 QTLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEK : ::.: .. : : : .: .. .:..: ::.. . :.:...:.:.: :... mFLJ00 AGLERRLREMHEAQLGRAGAAANRLEEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNR 190 200 210 220 230 240 290 300 310 320 330 mKIAA4 CEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLI----ADVTLDPETAHPNLVLSE ::... . : . . :. .::. ... .:.::::.:::: :.:: mFLJ00 CEEIQLQPPEIWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSP 250 260 270 280 290 300 340 350 360 370 380 390 mKIAA4 DRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSV ::..:...: : ...:. .::. :::...:: ::::::::::: . ::::. :.:. mFLJ00 DRRGVRLAERR-QEVPEHSKRFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAAREST 310 320 330 340 350 360 400 410 420 mKIAA4 SRK------------GELTP-----------LPETGYWRVRLW----NGDKY-AATTTPF .: :. . ::. . ..: .: .: : ..: mFLJ00 HHKEKVGSGGSSVSSGDASSSRHHHRRRRLHLPQQLLLQREVWCVGTHGKRYQAQSSTEQ 370 380 390 400 410 420 430 440 450 460 470 480 mKIAA4 TPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFT-EKLWPLFYPGIRAGRKN : : ::.: :..:::::: :.:::. .:..::. .: :...:.: .. : . mFLJ00 TLLSPCEKPRRFGVYLDYEAGRLGFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIK 430 440 450 460 470 480 490 500 mKIAA4 AAPLTIRPPTDWE : mFLJ00 LCP 490 >>mKIAA1098 ( 193 res) mpk01986 (193 aa) initn: 263 init1: 133 opt: 334 Z-score: 239.6 bits: 52.5 E(): 3.4e-08 Smith-Waterman score: 334; 31.410% identity (32.667% ungapped) in 156 aa overlap (11-163:4-156) 10 20 30 40 50 60 mKIAA4 ARHSGTRSREVIMAETSLLEAGTSAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNF :. : . .: : :.. . .... : :.:: . ... : ..::::: mKIAA1 TPVVVTAAAPAMEPGPSVSPGPS--RSFKEELLCAVCYDPFRDAVTLRCGHNF 10 20 30 40 50 70 80 90 100 110 mKIAA4 CKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVE-IAKQLQTVKRKI--RDES :. :.. :: .. ::::.. . :: :. :...:: . .. : :. mKIAA1 CRRCVSGCWE-VQTTPSCPVCKERAVPGELRTNHTLNNLVETLLREEAEGARWTGRRSPR 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA4 LCSQHHEPLSLFCYEDQEAVCLICAISHTHRPHTVVPMDDATQEYKEKLQKCLEPLEQKL : :. ::.::: ::.: .: : . :. : : :. :..:... mKIAA1 PCRAHRAPLTLFCLEDKELLCCACQADARHQEHRVQPIKDTAQDFRVSTAPARPGDPRPA 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA4 QEITCCKASEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDILQR mKIAA1 PPPPPGLATILPPVQANLNNDGE 180 190 >>mKIAA0898 ( 1006 res) mbg05750 (1006 aa) initn: 125 init1: 87 opt: 240 Z-score: 171.9 bits: 42.3 E(): 0.0002 Smith-Waterman score: 242; 24.561% identity (27.317% ungapped) in 228 aa overlap (56-266:82-303) 30 40 50 60 70 80 mKIAA4 ASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTS :.. : .:: :: :. :: :: mKIAA0 QWMSRVWRALLRFSDVSFVWRNCGMLDCPHCSKLCCFSCIRRWLT--EQRAQCPHCRAPL 60 70 80 90 100 90 100 110 120 130 mKIAA4 RYRSLRPNRQLGSMVEIAKQLQTV------KRKIRDESLCSQHHEPLSLFCYEDQEAVCL . : : : :...::.:. :.. ... : .::: ::.::. .. .: mKIAA0 QLRELVNCRW---AEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICH 110 120 130 140 150 160 140 150 160 170 180 190 mKIAA4 ICAI-SHTHRPHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEEKKPGELKRLV ::. . : :: :. . ... :... . :...:.:. :.. .. mKIAA0 QCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAK 170 180 190 200 210 220 200 210 220 230 240 mKIAA4 ESRRQQILKEFEELHRRLDEE----------QQTLLSRLEEEEQDILQRLRENAAHLGDR . : ..: . : . ::: . :.: :.. : ...::.. :. ..: .. mKIAA0 DERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEV-ESKSELISK 230 240 250 260 270 280 250 260 270 280 290 300 mKIAA4 RRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYF .. . .:. : . : mKIAA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 290 300 310 320 330 340 >>mKIAA0129 ( 453 res) msh25292 (453 aa) initn: 359 init1: 166 opt: 199 Z-score: 148.3 bits: 36.8 E(): 0.0041 Smith-Waterman score: 422; 28.747% identity (33.051% ungapped) in 407 aa overlap (119-475:35-438) 90 100 110 120 130 140 mKIAA4 SLRPNRQLGSMVEIAKQLQTVKRKIRDESLCSQHHE-PLSLFCYEDQEAVCLICAISHTH : .: : : ::: . . :: .: . .: mKIAA0 HREQRLPLRMASETTEARAPFQPDGAYGWRCPEHSERPAELFCRRCGRCVCALCPVLGAH 10 20 30 40 50 60 150 160 170 180 190 200 mKIAA4 RPHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEEKKPGELKRLVESRRQQILK : : : .. . . .. .: ::: : : .. . : : .:: ..: . . . mKIAA0 RGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSSKAWLTQ 70 80 90 100 110 120 210 220 230 240 250 260 mKIAA4 EFEELHRRLDEEQQTLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEG------ .: ::. ::::. . ... : :: ::.: : . . . ....: : mKIAA0 KFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWGIGQEPN 130 140 150 160 170 180 270 280 290 mKIAA4 --KCLQS--------GFEM------------LKDVKSTL-EKCEKVKTMEVTSVSIELEK . ::. : .: .. ::. . : : . . : .. .:.. mKIAA0 PVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPMDTRLKE 190 200 210 220 230 240 300 310 320 330 340 mKIAA4 NF--------SNFPRQYFAL-----RKILKQLIADVTLDPETAHPNLVLSEDRKSVKF-V :. :. : . : .. . ::::.: : : :: : .:. . mKIAA0 NINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGLTVRCSL 250 260 270 280 290 300 350 360 370 380 390 400 mKIAA4 ETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDK-THWAVGVCRDSVSRKGELT :: : .: :: ::. .::..:::::::.: . . : ::. :. :.: . mKIAA0 LGRLGPRP-AP-RFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRRGA-S 310 320 330 340 350 360 410 420 430 440 450 mKIAA4 PLPETG----YWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTD- . : : :. .. . .: . :. . :.:.:.::::::: :.::.:. mKIAA0 AAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDVAGG 370 380 390 400 410 420 460 470 480 490 500 mKIAA4 RSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLTIRPPTDWE ::..:: .: : :.: mKIAA0 MSHLHTFHAAFQEPLYPALRLWEGPISIPRLP 430 440 450 500 residues in 1 query sequences 1768517 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:04:15 2006 done: Mon Mar 27 11:04:16 2006 Scan time: 0.700 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]