FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00261.ptfa, 183 aa vs ./tmplib.26680 library 1768834 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.9873+/-0.00427; mu= 14.7034+/- 0.286 mean_var=83.9425+/-19.105, 0's: 0 Z-trim: 12 B-trim: 2 in 1/35 Lambda= 0.1400 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0915 ( 438 res) mid15017 ( 438) 167 43 2e-05 mFLJ00204 ( 618 res) msp00191 ( 618) 165 43 3.2e-05 mKIAA0142 ( 809 res) mbg20462 ( 809) 142 38 0.00093 mKIAA1959 ( 461 res) mtk01075 ( 461) 133 36 0.0024 mKIAA1494 ( 914 res) mpm09319 ( 914) 132 36 0.004 >>mKIAA0915 ( 438 res) mid15017 (438 aa) initn: 117 init1: 88 opt: 167 Z-score: 189.8 bits: 43.0 E(): 2e-05 Smith-Waterman score: 167; 25.157% identity (27.397% ungapped) in 159 aa overlap (20-174:276-425) 10 20 30 40 mFLJ00 GWVKFQNSRLRLKRLLSCRGSRFLVFDHAPFSSIRGEKCEMKLHGPHKN :.:. :.:.: : ..... :: mKIAA0 GGVLFTSRPRFTPLCLLLFSDLLLITQPKSGQRLQVLDYAHRSLVQAQQVPDP-SGPPT- 250 260 270 280 290 300 50 60 70 80 90 100 mFLJ00 LFRLFLLHNAQGTQVEFLFRTETQSEKLRWISAL----AMPREELDLLECYDSPQVQCLR ::: :: : :: .. :... . :. ::..:. .: . : . : : . mKIAA0 -FRLSLLSNHQGRPTHRLLQAASLSDMQRWLGAFPTPGPLPCSPDTIYEDCECSQELCSE 310 320 330 340 350 360 110 120 130 140 150 160 mFLJ00 AYKPRENDELALEKADVVMVTQQSSDGWLEGVRLSDGEQGWFPVQQVEFISNPEVRAQNL : ... .::. ... .:::.:. : ::.: : ... . : ..: mKIAA0 PSTPSKTEGQSLESKAPRKHLHKNPEGWLKGL------PGAFPAQLVCEVTGEHERRKHL 370 380 390 400 410 170 180 mFLJ00 KEAHRVKTAKLQLVEQQV .. ... : mKIAA0 RQHQKLLEAVGPSSGTPDTPQP 420 430 >>mFLJ00204 ( 618 res) msp00191 (618 aa) initn: 172 init1: 150 opt: 165 Z-score: 186.1 bits: 42.8 E(): 3.2e-05 Smith-Waterman score: 165; 38.750% identity (42.466% ungapped) in 80 aa overlap (84-156:179-258) 60 70 80 90 100 mFLJ00 FLLHNAQGTQVEFLFRTETQSEKLRWISALAMPREELDLLECYDSPQVQ-------CLRA :.:: : ::.:: : : mFLJ00 PRAAARIGELAHLSCTVPTQDSSSAGPVPTALPRAAAVAGEQGMSPKVQLPLNVYLALYA 150 160 170 180 190 200 110 120 130 140 150 160 mFLJ00 YKPRENDELALEKADVVMVTQQSSDGWLEGVRLSDGEQGWFPVQQVEFISNPEVRAQNLK :::..:::: :.:... : .. .:::..:. :. : .: :: . : .: mFLJ00 YKPQKNDELELRKGEMYRVLEKCQDGWFKGASLKTGVSGVFPGNYVTPVSRVPGGGAGLP 210 220 230 240 250 260 170 180 mFLJ00 EAHRVKTAKLQLVEQQV mFLJ00 WNNVLGGSPLAKGMATIMHPGGGSLSSPATAARSALPLTTLQDHMQHPATSLPTGSCLRH 270 280 290 300 310 320 >>mKIAA0142 ( 809 res) mbg20462 (809 aa) initn: 120 init1: 86 opt: 142 Z-score: 159.8 bits: 38.3 E(): 0.00093 Smith-Waterman score: 142; 32.967% identity (35.714% ungapped) in 91 aa overlap (72-159:165-251) 50 60 70 80 90 100 mFLJ00 KLHGPHKNLFRLFLLHNAQGTQVEFLFRTETQSEKLRWISALAMPREELDLLECYDSPQV .:: . : . : . ::. . .: : mKIAA0 NKVTADIGLGSDSVCARPSSHRIKSFDSLGSQSSHSRTSKLLQSQYRSLDMTDNTNSQLV 140 150 160 170 180 190 110 120 130 140 150 mFLJ00 QCLRA---YKPRENDELALEKADVVMVTQQSSDGWLEGVRLSDGEQGWFPVQQVEFISNP .:: .. ..:::.. :.::. ::. :: ::.. .:. :::: . :. :. mKIAA0 --VRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTH--NGRTGWFPSNYVREIKPS 200 210 220 230 240 250 160 170 180 mFLJ00 EVRAQNLKEAHRVKTAKLQLVEQQV : mKIAA0 EKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETEHEYSKELQSVLSTYLRPLQTS 260 270 280 290 300 310 >>mKIAA1959 ( 461 res) mtk01075 (461 aa) initn: 92 init1: 66 opt: 133 Z-score: 152.4 bits: 36.1 E(): 0.0024 Smith-Waterman score: 133; 23.622% identity (26.316% ungapped) in 127 aa overlap (29-148:2-122) 10 20 30 40 50 60 mFLJ00 GWVKFQNSRLRLKRLLSCRGSRFLVFDHAPFSSIRGEKCEMKLHGPHKNLFRLFLLHNAQ : :.. . : :.... :::. ... : .. : mKIAA1 AADFAAEAASKTEVHVE-PHKKQLHVTLAYHFQ 10 20 30 70 80 90 100 110 mFLJ00 GTQVEFLFR-TETQSEKL--RWISALAMPREELDLLECYDSPQVQCLRAYKPRENDELAL .... : . ... . :: :.... . :. .. . .: . :.:...::: : mKIAA1 ASHLPTLEKLAQNIDVKLGCDWVATI-FSRD----IRFANHETLQVIYPYSPQNDDELEL 40 50 60 70 80 120 130 140 150 160 170 mFLJ00 EKADVVMVTQQ----SSDGWLEGVRLSDGEQGWFPVQQVEFISNPEVRAQNLKEAHRVKT .: .... . .:.::. :. :. : .: .: mKIAA1 VPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADECSTWIFHGSYSILNTV 90 100 110 120 130 140 180 mFLJ00 AKLQLVEQQV mKIAA1 SSSSLAFGDGALERRQYEDQGLGETTPLTIICQPMQPLRVNSQPGPQKRCLFVCRHGERM 150 160 170 180 190 200 >>mKIAA1494 ( 914 res) mpm09319 (914 aa) initn: 250 init1: 124 opt: 132 Z-score: 148.4 bits: 36.4 E(): 0.004 Smith-Waterman score: 132; 28.750% identity (29.114% ungapped) in 80 aa overlap (88-166:465-544) 60 70 80 90 100 110 mFLJ00 NAQGTQVEFLFRTETQSEKLRWISALAMPREELDLLECYDSPQVQC-LRAYKPRENDELA :.. :. :.: . : ::..::: mKIAA1 TPSGATAAVAAAAAAAAAAGMGPRPVMGSSEQIAHLRPQTRPSVYVAIYPYTPRKEDELE 440 450 460 470 480 490 120 130 140 150 160 170 mFLJ00 LEKADVVMVTQQSSDGWLEGVRLSDGEQGWFPVQQVEFISNPEVRAQNLKEAHRVKTAKL :.:... .: .. .::: .:. . .. : :: . : .. . :.. : mKIAA1 LRKGEMFLVFERCQDGWYKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVSMSTAGQAS 500 510 520 530 540 550 180 mFLJ00 QLVEQQV mKIAA1 RGVTMVSPSTAGGPTQKPQGNGVAGNPSVVPTAVVSAAHIQTSPQAKVLLHMSGQMTVNQ 560 570 580 590 600 610 183 residues in 1 query sequences 1768834 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:08:43 2006 done: Mon Mar 27 10:08:44 2006 Scan time: 0.390 Display time: 0.030 Function used was FASTA [version 3.4t11 Apr 17, 2002]