Comparison of KIAA cDNA sequences between mouse and human (FLJ00257)
<<Original sequence data>>
mouse mFLJ00257 (mid03069) length: 3621 bp, CDS: 392 - 2941
human (sj09683) length: 4862 bp, CDS: 355 - 2817
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 3 - 466 235 120 33.8
CDS: 467 - 2956 1753 667 27.6
3'UTR: 2957 - 4641 356 383 51.8
amino acid
CDS: 467 - 2956 494 327 39.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mid03069 1 ..GGAGCGCAAAGGACTTGGACTTCCCGGCTCTGATTCTTCACGAGTTGT 48
| || | | | ||||| || || || || ||| |
sj09683 1 GTGCAGTGGCACGATCTTGGTTCACCACAATC....TCGTCTCGAAGGCT 46
51 ----+----*----+----*----+----*----+----*----+----* 100
mid03069 49 TTAGAGACCCTCGGATCCCCTCCACCTTCACCGAGGTCTAGCCCACTAAA 98
| || ||| | | | ||
sj09683 47 CAGGTGATTCTCTCACCTCAGCC........................... 69
101 ----+----*----+----*----+----*----+----*----+----* 150
mid03069 99 TCTAGGACCGGGTAGCCTGAGCAGCCCAGAAGCCAAGGTGACATCCGTGT 148
||||||| ||| || ||| || || | |||
sj09683 70 ..............GCCTGAGTAGCTGGGA..CCACAGTTTCAGCTGTGA 103
151 ----+----*----+----*----+----*----+----*----+----* 200
mid03069 149 GTCTCTCCTGCCTGAAAGCTGGGATATTTTATCAGACTCAGCGCCTCGTT 198
||
sj09683 104 GTTC.............................................. 107
201 ----+----*----+----*----+----*----+----*----+----* 250
mid03069 199 CCTTTAAAAGATGAGCATGGAGACACATC...CCTCTTTAGAAGTGAAAG 245
| ||||||| || ||| | | | | ||| ||
sj09683 108 .............AACATGGAGGCAAATCAGTGCCCCCTGGTTGTGGAAC 144
251 ----+----*----+----*----+----*----+----*----+----* 300
mid03069 246 GGTCGTGCCCAGACTTGATCATCTACGCAGGAGAAGTGACTCTGGGAGAA 295
|| | ||||||| || ||||| | | ||||||||||||||| ||||||
sj09683 145 CATCTTACCCAGACCTGGTCATCAATGTAGGAGAAGTGACTCTTGGAGAA 194
301 ----+----*----+----*----+----*----+----*----+----* 350
mid03069 296 AAAGTTCGAAGTAAAATGGACTCAAAGGAAAGAAAGCTGGAGAAGAAAAG 345
|| ||| || || | || | ||| | | |||||| | ||
sj09683 195 GAAAACAGAAAAAAGCTGCAGAAAATTCAGAGAGACCAAGAGAAGGAGAG 244
351 ----+----*----+----*----+----*----+----*----+----* 400
mid03069 346 AATTACTGAGGCTGCTTGTGCTCTGTTAAACTCTGGAGGAGGATGAATTG 395
| ||| |||||| |||||| | |||||||| ||||||||| |
sj09683 245 AGTTATGCGGGCTGCATGTGCTTTATTAAACTCAGGAGGAGGA......G 288
401 ----+----*----+----*----+----*----+----*----+----* 450
mid03069 396 CTATGCAAACGACTAACAAGAGTGAGCATCCTGTGGAGATGGGACAGGAT 445
|| | || | | || ||| ||||||||| ||||||||||||| ||||
sj09683 289 TGATTCGAATGGCCAAGAAGGTTGAGCATCCCGTGGAGATGGGACTGGAT 338
451 ----+----*----+----*----+----*----+----*----+----* 500
E S L L C P L I C R V S
mid03069 446 TTGGAAAAGTCTTTGAGAGAGCTTATTATGTCCTCTAATATGCAGGGTTT 495
|| ||| |||||||||||||||||||| ||| || || |||||| |||
sj09683 339 TTAGAACAGTCTTTGAGAGAGCTTATTCAGTCTTCAGATCTGCAGGCTTT 388
E S L F S L Q I C R L S
501 ----+----*----+----*----+----*----+----*----+----* 550
L R P S N K R T S S T F L L N L
mid03069 496 CTTTGAGACCAAGCAACAAGAGGACCAGTTCTACATTTTTGTTAAATCTT 545
|||||||||||||||||||| || |||||||||||||||||||
sj09683 389 CTTTGAGACCAAGCAACAAGGAAGGTGTTTTTACATTTTTGTTAAATCTT 438
L R P S N K E G V F T F L L N L
551 ----+----*----+----*----+----*----+----*----+----* 600
G A A - L K M L P L S L E F A
mid03069 546 GGAGCTGCAG......CCCTGAAGATGCTTCCACTAAGCCTCGAATTTGC 589
||||| | | |||||||||| || ||||| || |||||
sj09683 439 GGAGCAGTGGCCCTTTCCCTGAAGATCGCTCTTTCAAGCCCCGCCTTTGC 488
G A V A L S L K I A L S S P A F A
601 ----+----*----+----*----+----*----+----*----+----* 650
A W A L P C - C R S L T S N V A M
mid03069 590 AGCCTGGGCTCTTCCCTGTA.CTGTAGATCTTTAACTTCTAACGTTGCCA 638
||||| | ||||| | || |||||||||| || ||| | |||
sj09683 489 AGCCTCAGTTCTTCATTATACCTGTAGATCTGAGACCTCTGTGCGTTCCA 538
A S V L H Y T C R S E T S V R S M
651 ----+----*----+----*----+----*----+----*----+----* 700
D S R E A F D F L K G K K D
mid03069 639 TGGATTCAAGGGAAGCATTTGACTTTCTGAAGGGCAAGAAG.....AGAT 683
|||| ||||| || ||||| || |||||| ||| | | | |
sj09683 539 TGGACTCAAGAGAGGCATTCTGTTTCCTGAAGACCAAAAGGAAGCCAAAA 588
D S R E A F C F L K T K R K P K
701 ----+----*----+----*----+----*----+----*----+----* 750
V L S A V P D D R A N - F Q
mid03069 684 GTGTTAAGTGCAGTCCTACTGATGACAGAGCCAATAA.....AATTCCAG 728
| || | || | || | ||| | | || || |||
sj09683 589 ATCTTGGAAGAAGGAC..CTTTTCACAAAATTCACAAGGGTGTATACCAA 636
I L E E G P F H K I H K G V Y Q
751 ----+----*----+----*----+----*----+----*----+----* 800
E - M Y Q N S L E T N P A F E
mid03069 729 GAGC.......CATGTATCAGAACAGCCTTGAAACAAATCCAGCTTTTGA 771
|||| | | ||| || | | |||| |||
sj09683 637 GAGCTCCCTAACTCGGATCCTGCTGACCCAAACTCGGATCCTGCTGACCT 686
E L P N S D P A D P N S D P A D L
801 ----+----*----+----*----+----*----+----*----+----* 850
I F Q S K K L E Y G Q H L L F S E
mid03069 772 AATTTTCCAAAGTAAGAAACTTGAATATGGCCAACACTTGCTTTTTTCTG 821
||||||||||| | | ||||||||||| || | ||| |||| |||
sj09683 687 AATTTTCCAAAAAGACTATCTTGAATATGGTGAAATCCTGCCTTTTCCTG 736
I F Q K D Y L E Y G E I L P F P E
851 ----+----*----+----*----+----*----+----*----+----* 900
S T F I Q F K Q F S T K H V Q E
mid03069 822 AATCCACATTTATACAGTTTAAACAATTCTCTACCAAACATGTCCAAGAA 871
| || || || |||||||||| |||||||| ||||| ||||||||
sj09683 737 AGTCTCAGTTAGTAGAGTTTAAACAGTTCTCTACAAAACACTTCCAAGAA 786
S Q L V E F K Q F S T K H F Q E
901 ----+----*----+----*----+----*----+----*----+----* 950
Y I K N K I P E Y I S A F A N T Q
mid03069 872 TATATAAAAAACAAAATTCCAGAGTACATCTCCGCATTTGCAAACACCCA 921
||| |||||| | ||||||||| ||| || | ||||||||||||||
sj09683 787 TATGTAAAAAGGACAATTCCAGAATACGTCCCTGCATTTGCAAACACTGG 836
Y V K R T I P E Y V P A F A N T G
951 ----+----*----+----*----+----*----+----*----+----* 1000
G G Y L F I G V D D K S - I L G
mid03069 922 GGGAGGCTATCTTTTCATTGGAGTGGATGATAAGAGTA...CCATCCTGG 968
|||||||||||||| |||||||||||||||||||||| ||||||
sj09683 837 AGGAGGCTATCTTTTTATTGGAGTGGATGATAAGAGTAGGGAAGTCCTGG 886
G G Y L F I G V D D K S R E V L G
1001 ----+----*----+----*----+----*----+----*----+----* 1050
C P K D N V D R D S L K T V A N
mid03069 969 GATGCCCAAAAGACAACGTTGACCGTGACTCTTTGAAAACTGTGGCAAAT 1018
|||| ||||||| || ||||||| ||||||||||| || | |
sj09683 887 GATGTGCAAAAGAAAATGTTGACCCTGACTCTTTGAGAAGGAAAATAGAA 936
C A K E N V D P D S L R R K I E
1051 ----+----*----+----*----+----*----+----*----+----* 1100
E A I S K L P V F H F C K D K
mid03069 1019 GAAGCAATCTCCAAGTTGCCAGTTTTCCATTTTTGTTCATCTAAAGACAA 1068
|||| || | ||| | || | | |||||||| || | |
sj09683 937 CAAGCCATATACAAACTACCTTGTGTTCATTTTTG......CCAACCCCA 980
Q A I Y K L P C V H F C Q P Q
1101 ----+----*----+----*----+----*----+----*----+----* 1150
D K V S Y E T R V I D V F Q E G N
mid03069 1069 GGACAAGGTGTCTTATGAGACCAGAGTCATAGATGTGTTTCAAGAGGGAA 1118
| | | | | || | | | |||||||| || ||||
sj09683 981 ACGCCCGATAACCTTCACACTCAAAATTGTGGATGTGTTAAAAAGGGGAG 1030
R P I T F T L K I V D V L K R G E
1151 ----+----*----+----*----+----*----+----*----+----* 1200
L Y G Y L C V I K V E P F C C A
mid03069 1119 ATTTGTATGGTTATCTCTGTGTGATCAAAGTAGAGCCTTTCTGCTGTGCA 1168
| | ||||| ||| || |||||| |||| | || ||||||||||||
sj09683 1031 AGCTCTATGGCTATGCTTGCATGATCAGAGTAAATCCCTTCTGCTGTGCA 1080
L Y G Y A C M I R V N P F C C A
1201 ----+----*----+----*----+----*----+----*----+----* 1250
V F S E A P I S W M V E E K G V
mid03069 1169 GTGTTCTCAGAGGCTCCCATTTCATGGATGGTAGACAAGGAGAAAGGTGT 1218
||||||||||| ||||||| ||||||||| || | |||| || ||
sj09683 1081 GTGTTCTCAGAAGCTCCCAATTCATGGATAGTGG...AGGACAAGTACGT 1127
V F S E A P N S W I V E D K Y V
1251 ----+----*----+----*----+----*----+----*----+----* 1300
Y R L N T E E W V R M M V D P
mid03069 1219 CTACAGACTGAACACCGAGGAATGGGTACGCATGATGGTGGATGTTGGCC 1268
|| ||| |||| |||||| |||||||| |||||||| || |
sj09683 1128 CTGCAGCCTGACAACCGAGAAATGGGTAGGCATGATGACAGA......CA 1171
C S L T T E K W V G M M T D T
1301 ----+----*----+----*----+----*----+----*----+----* 1350
E A A S K D L S K D F E C Q L S
mid03069 1269 CAGAGGCAGCTTCCAAAGATCTATCTAAAGATTTTGAATGTCAGCTGAGT 1318
|||| ||| | | | | ||| |||||||||||||||||||||||
sj09683 1172 CAGATCCAGATCTTCTACAGTTGTCTGAAGATTTTGAATGTCAGCTGAGT 1221
D P D L L Q L S E D F E C Q L S
1351 ----+----*----+----*----+----*----+----*----+----* 1400
L S N S P P R C R P V Y S K K G L
mid03069 1319 CTATCCAACAGCCCCCCACGCTGCAGACCAGTGTATTCTAAAAAGGGACT 1368
||||| | | || || | ||||||||||||| || || || || ||
sj09683 1222 CTATCTAGTGGGCCTCCCCTTAGCAGACCAGTGTACTCCAAGAAAGGCCT 1271
L S S G P P L S R P V Y S K K G L
1401 ----+----*----+----*----+----*----+----*----+----* 1450
E Y K V D L Q Q H L F Q V S P D H
mid03069 1369 GGAATATAAAGTCGACCTGCAGCAGCATTTATTTCAAGTGTCACCAGACC 1418
|||| ||||| || || ||||| | ||||||| ||| ||||||
sj09683 1272 GGAACATAAAAAGGAACTCCAGCAACTTTTATTTTCAGTCCCACCAGGAT 1321
E H K K E L Q Q L L F S V P P G Y
1451 ----+----*----+----*----+----*----+----*----+----* 1500
L K Y T P E S L W S E L C F E H
mid03069 1419 ATTTAAAGTATACTCCTGAATCTCTCTGGAGTGAGCTGTGTTTCGAGCAT 1468
|||| |||||||| || || |||||||| || ||| | |||||
sj09683 1322 ATTTGCGATATACTCCAGAGTCACTCTGGAGGGACCTGATCTCAGAGCAC 1371
L R Y T P E S L W R D L I S E H
1501 ----+----*----+----*----+----*----+----*----+----* 1550
E R L E D L V K Q Q I R S F S C G
mid03069 1469 GAGAGACTAGAGGATTTAGTAAAGCAGCAAATACGTTCTTTCTCCTGTGG 1518
|||||||||| ||| |||| ||||||| | |||||| | ||
sj09683 1372 AGAGGACTAGAGGAGTTAATAAATAAGCAAATGCAACCTTTCTTTCGGGG 1421
R G L E E L I N K Q M Q P F F R G
1551 ----+----*----+----*----+----*----+----*----+----* 1600
L L I L S R S W A V D L N L E E K
mid03069 1519 TTTGCTGATCCTCTCTAGAAGCTGGGCTGTGGACCTGAACCTGGAAGAGA 1568
| ||||| |||||||||| |||||||||||||||||| || | ||||
sj09683 1422 AATTTTGATCTTCTCTAGAAGTTGGGCTGTGGACCTGAACTTGCAGGAGA 1471
I L I F S R S W A V D L N L Q E K
1601 ----+----*----+----*----+----*----+----*----+----* 1650
Q E V I C D A L L I A E N S P P
mid03069 1569 AGCAGGAAGTCATCTGTGATGCTCTGCTGATTGCAGAGAATAGCCCCCCC 1618
||| | |||||||||||||||||||||||| ||| |||| ||| |||||
sj09683 1472 AGCCAGGAGTCATCTGTGATGCTCTGCTGATAGCACAGAACAGCACCCCC 1521
P G V I C D A L L I A Q N S T P
1651 ----+----*----+----*----+----*----+----*----+----* 1700
I L Y T I L G E Q D E Q G Q D Y C
mid03069 1619 ATCCTCTACACCATCCTTGGGGAGCAGGATGAGCAGGGTCAGGACTACTG 1668
|| ||||||||||| || |||||||||||| |||| |||||||||||
sj09683 1522 ATTCTCTACACCATTCTCAGGGAGCAGGATGCAGAGGGCCAGGACTACTG 1571
I L Y T I L R E Q D A E G Q D Y C
1701 ----+----*----+----*----+----*----+----*----+----* 1750
T S T A F T L K Q K L V N T G G Y
mid03069 1669 CACCAGCACTGCCTTTACTCTGAAGCAGAAGCTGGTGAACACTGGTGGCT 1718
||| |||||||||||||| ||||||||||||| ||||||| || ||||
sj09683 1572 CACTCGCACTGCCTTTACTTTGAAGCAGAAGCTAGTGAACATGGGGGGCT 1621
T R T A F T L K Q K L V N M G G Y
1751 ----+----*----+----*----+----*----+----*----+----* 1800
T G R V C V M T K V L C L S S Q
mid03069 1719 ACACTGGGAGAGTGTGTGTCATGACCAAAGTTCTCTGCCTGAGTTCTCAG 1768
|||| |||| |||||||||| | |||| || |||||||||||| || ||
sj09683 1622 ACACCGGGAAGGTGTGTGTCAGGGCCAAGGTCCTCTGCCTGAGTCCTGAG 1671
T G K V C V R A K V L C L S P E
1801 ----+----*----+----*----+----*----+----*----+----* 1850
N S I E T N G G S V S P I D Y P H
mid03069 1769 AACAGTATTGAGACTAATGGGGGCTCAGTCTCTCCTATTGATTACCCACA 1818
| ||| ||| | | || |||| ||||| || ||||||||
sj09683 1672 AGCAGCGCAGAGGCCTTGGAGGCTGCAGTGTCTCCGATGGATTACCCTGC 1721
S S A E A L E A A V S P M D Y P A
1851 ----+----*----+----*----+----*----+----*----+----* 1900
S Y N L A N I Q E M Q D L L Q A L
mid03069 1819 CTCCTATAACCTTGCAAACATCCAGGAAATGCAGGACTTGCTGCAGGCCC 1868
||||||| ||||||| || |||| | ||| | | | |||||||| |||
sj09683 1722 GTCCTATAGCCTTGCAGGCACCCAGCACATGGAAGCCCTGCTGCAGTCCC 1771
S Y S L A G T Q H M E A L L Q S L
1901 ----+----*----+----*----+----*----+----*----+----* 1950
V I V L L N F R S F L S D Q L G
mid03069 1869 TTGTGATTGTCTTGCTCAACTTCAGATCTTTCTTGAGCGACCAGCTTGGC 1918
| ||||||||||| ||| |||||| ||| ||||||| |||||||| |||
sj09683 1772 TCGTGATTGTCTTACTCGGCTTCAGGTCTCTCTTGAGTGACCAGCTCGGC 1821
V I V L L G F R S L L S D Q L G
1951 ----+----*----+----*----+----*----+----*----+----* 2000
C E I L N L L T A Q Q Y E I L S K
mid03069 1919 TGTGAAATTTTGAATCTTCTCACAGCCCAACAGTATGAGATACTCTCAAA 1968
||||| |||| ||||| ||||||||||| |||||||||||| |||| |
sj09683 1822 TGTGAGGTTTTAAATCTGCTCACAGCCCAGCAGTATGAGATATTCTCCAG 1871
C E V L N L L T A Q Q Y E I F S R
2001 ----+----*----+----*----+----*----+----*----+----* 2050
S L R K T R E L F V H G L P G S G
mid03069 1969 AAGTCTCCGCAAAACCAGAGAACTATTTGTGCATGGCTTGCCGGGCTCAG 2018
||| |||||||| | |||||| | ||||| || ||||| || |||||||
sj09683 1872 AAGCCTCCGCAAGAACAGAGAGTTGTTTGTCCACGGCTTACCTGGCTCAG 1921
S L R K N R E L F V H G L P G S G
2051 ----+----*----+----*----+----*----+----*----+----* 2100
K T I I A M K I M E K I R N T F
mid03069 2019 GGAAGACAATCATAGCCATGAAAATCATGGAAAAGATCAGAAACACATTC 2068
||||||| ||||| |||||||| |||||||| |||||||| || ||
sj09683 1922 GGAAGACCATCATGGCCATGAAGATCATGGAGAAGATCAGGAATGTGTTT 1971
K T I M A M K I M E K I R N V F
2101 ----+----*----+----*----+----*----+----*----+----* 2150
H C E T D R I L Y I C E N Q P L R
mid03069 2069 CACTGTGAAACAGATAGAATCCTCTACATCTGTGAAAATCAGCCATTGAG 2118
|||||||| || | ||||| |||||| | |||||||| ||||| ||||
sj09683 1972 CACTGTGAGGCACACAGAATTCTCTACGTTTGTGAAAACCAGCCTCTGAG 2021
H C E A H R I L Y V C E N Q P L R
2151 ----+----*----+----*----+----*----+----*----+----* 2200
D F I Q A K N I C Q A V T R E T F
mid03069 2119 GGACTTCATCCAGGCAAAAAATATCTGCCAGGCAGTGACCCGGGAAACCT 2168
| |||| ||| | | ||||||||||| |||| ||||||| |||| |
sj09683 2022 GAACTTTATCAGTGATAGAAATATCTGCCGAGCAGAGACCCGGAAAACTT 2071
N F I S D R N I C R A E T R K T F
2201 ----+----*----+----*----+----*----+----*----+----* 2250
M K D Y F D R I Q H I I V D
mid03069 2169 TCATGAAAGATTACTTTGAGACAAACAGGATCCAACATATCATTGTTGAT 2218
|| | | ||| |||||| | || ||||| ||| | ||||
sj09683 2072 TCCTAAGAGAAAACTTTG......AACACATTCAACACATCGTCATTGAC 2115
L R E N F E H I Q H I V I D
2251 ----+----*----+----*----+----*----+----*----+----* 2300
E A Q N F C T E D G N W Y E K A K
mid03069 2219 GAAGCCCAGAATTTCTGCACTGAAGATGGGAACTGGTATGAGAAGGCAAA 2268
||||| ||||||||| | |||||||||||| ||||||||| |||||||||
sj09683 2116 GAAGCTCAGAATTTCCGTACTGAAGATGGGGACTGGTATGGGAAGGCAAA 2165
E A Q N F R T E D G D W Y G K A K
2301 ----+----*----+----*----+----*----+----*----+----* 2350
G I T R R M K C C P G I L W I F L
mid03069 2269 AGGAATCACTCGAAGAATGAAATGTTGTCCTGGAATTCTCTGGATCTTTC 2318
| | |||||||| ||| || || | || |||||||||||||||||||
sj09683 2166 AAGCATCACTCGGAGAGCAAAGGGTGGCCCAGGAATTCTCTGGATCTTTC 2215
S I T R R A K G G P G I L W I F L
2351 ----+----*----+----*----+----*----+----*----+----* 2400
D Y F Q T S H L K K S G L P N F
mid03069 2319 TGGACTATTTTCAGACCAGTCACTTGAAGAAGAGTGGCCTCCCAAATTTC 2368
|||| || ||||||||||| |||||| | ||||||||||| | ||
sj09683 2216 TGGATTACTTTCAGACCAGCCACTTGGATTGCAGTGGCCTCCCTCCTCTC 2265
D Y F Q T S H L D C S G L P P L
2401 ----+----*----+----*----+----*----+----*----+----* 2450
L C Q F P T E K L T Q M V R N A D
mid03069 2369 TTATGCCAGTTTCCGACGGAAAAGCTCACACAAATGGTACGCAATGCAGA 2418
| | ||| | ||| | ||| ||||||| ||| || |||||||||||
sj09683 2266 TCAGACCAATATCCAAGAGAAGAGCTCACCAGAATAGTTCGCAATGCAGA 2315
S D Q Y P R E E L T R I V R N A D
2451 ----+----*----+----*----+----*----+----*----+----* 2500
K I A E F L Q Q E L R K I R A N P
mid03069 2419 TAAAATAGCTGAGTTCCTACAACAAGAGTTGCGAAAAATCAGAGCTAACC 2468
| |||||| ||| | ||||| |||| ||| | ||| ||| ||| |
sj09683 2316 TCCAATAGCCAAGTACTTACAAAAAGAAATGCAAGTAATTAGAAGTAATC 2365
P I A K Y L Q K E M Q V I R S N P
2501 ----+----*----+----*----+----*----+----*----+----* 2550
P F S I P Q G S L S M F H G F Y
mid03069 2469 CTCCATTCAGCATCCCTCAAGGGTCCCTAAGCATGTTCCATGGATTTTAC 2518
|| |||| | |||||| |||| ||| | || | || | |
sj09683 2366 CTTCATTTAACATCCCCACTGGGTGCCTCGAGGTATTTCCTGAAGCCGAA 2415
S F N I P T G C L E V F P E A E
2551 ----+----*----+----*----+----*----+----*----+----* 2600
W A Q G V Q A P M R - T Y L T L
mid03069 2519 TGGGCTCAGGGTGTATCAGGCACCCATGAGATT....ACATACTTGACTT 2564
||| | |||||||| ||||| | || | || | | ||||||||||
sj09683 2416 TGGTCCCAGGGTGT.TCAGGGAACCTTACGAATTAAGAAATACTTGACTG 2464
W S Q G V Q G T L R I K K Y L T V
2601 ----+----*----+----*----+----*----+----*----+----* 2650
E K M V S Y V A D K C D V F L S
mid03069 2565 TGGAAAAGATGGTAAGCTATGTAGCAGATAAGTGTGATGTTTTCTTGAGT 2614
|||| | || | | || ||| ||||| | ||| ||||| |
sj09683 2465 TGGAGCAAATAATGACCTGTGTGGCAGACACGTGCAGGCGCTTCTTTGAT 2514
E Q I M T C V A D T C R R F F D
2651 ----+----*----+----*----+----*----+----*----+----* 2700
K G Y S P Q D I A V L F S T D R E
mid03069 2615 AAAGGCTATTCTCCCCAAGATATTGCAGTGCTTTTCAGCACAGACAGGGA 2664
| ||||||||||| | ||| |||| |||||| ||||||| | | ||
sj09683 2515 AGGGGCTATTCTCCAAAGGATGTTGCTGTGCTTGTCAGCACCGCAAAAGA 2564
R G Y S P K D V A V L V S T A K E
2701 ----+----*----+----*----+----*----+----*----+----* 2750
K K A Y E H M F L R E I R K K R
mid03069 2665 AAAGAAAGCCTATGAGCATATGTTCCTGAGAGAAATAAGGAAGAGGAAGA 2714
| | | |||| || || | || ||| || ||| ||||| ||| |
sj09683 2565 AGTGGAGCACTATAAGTATGAGCTCTTGAAAGCAATGAGGAA...GAAAA 2611
V E H Y K Y E L L K A M R K K R
2751 ----+----*----+----*----+----*----+----*----+----* 2800
A S Q M N D A S - C H S N M
mid03069 2715 GAGCATCTCAGATGAATGACGCGTCTG......TCTGTCATTCTAACATG 2758
| | ||| | | ||| || | || | || || | ||
sj09683 2612 GGGTGGTGCAGCTCAGTGATGCATGTGATATGTTGGGTGATCACATTGTG 2661
V V Q L S D A C D M L G D H I V
2801 ----+----*----+----*----+----*----+----*----+----* 2850
F D S I R R F S G L E K S I V F G
mid03069 2759 TTTGACAGCATCCGTCGATTCTCAGGACTGGAAAAAAGCATTGTGTTTGG 2808
|| ||||| | || ||||||||||| ||||||| ||||| ||||||||
sj09683 2662 TTGGACAGTGTTCGGCGATTCTCAGGCCTGGAAAGGAGCATAGTGTTTGG 2711
L D S V R R F S G L E R S I V F G
2851 ----+----*----+----*----+----*----+----*----+----* 2900
I N P N A T E Q P I S H N L L L C
mid03069 2809 TATCAATCCCAATGCAACTGAGCAGCCCATTTCCCACAACCTATTGCTCT 2858
||| |||| | || |||| | | || | | ||| | || |||
sj09683 2712 GATCCATCCAAGGACAGCTGACCCAGCTATCTTACCCAATGTTCTGATCT 2761
I H P R T A D P A I L P N V L I C
2901 ----+----*----+----*----+----*----+----*----+----* 2950
L A S R A T E H L Y -
mid03069 2859 GCCTGGCTTCCAGAGCAACGGAACATCTGTATAT................ 2892
| ||||||||||| |||| |||| ||||||||
sj09683 2762 GTCTGGCTTCCAGGGCAAAACAACACCTGTATATTTTTCCGTGGGGTGGC 2811
L A S R A K Q H L Y I F P W G G
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mid03069 2893 .................................................. 2893
sj09683 2812 CATTAGGAAGAACTCCAAATCAAAATGCTATGTAAATGTCTATGGGTGAC 2861
H *
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mid03069 2893 .................................................. 2893
sj09683 2862 AGTCTGCTGATGGTAGAAACCTTTCTTTTTAGTTCACAAGTCAGAGATTT 2911
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mid03069 2893 .................................................. 2893
sj09683 2912 GGACGGAGCTGACACAAAGAGTTTGGAGCTCCCCCATTTCTGGCTCTCCT 2961
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mid03069 2893 .................................................. 2893
sj09683 2962 TTCAGGGGTTCCTTCCCCAACCCTTTTCAGCAGCGGTGGCTGCCCCCCAT 3011
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mid03069 2893 .......CCTGTATCTTTCAACTCCTGAGGGG.................. 2917
|||| |||| || | || |
sj09683 3012 TCTGACCCCTGACTCTTCCAGCCAGAAAGATGGTGGTTTTCTAAAGGAAC 3061
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mid03069 2918 TATAGCTCAACAGTGGCATGCTGAATGGGATGTATGAGGTCCTAGGTACA 2967
| ||||| | | |||| || | ||| | | | |||| |
sj09683 3062 TTTAGCTGTCCTGCACAATGCCGATCTG..TGTCTTGCATTTTGGGTAAA 3109
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mid03069 2968 ATCACTGATGACGAGAAAGTAAACTCAAAGAGGTCCT............. 3004
| | | | | ||||| | | | | | ||
sj09683 3110 AGCCATAAAAATAAGAAACTCAGCCTGTGGCCTTTCTTTCTTCCAAGGCT 3159
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mid03069 3005 .................................................. 3005
sj09683 3160 GGGCTTCTTTTTTTAAGTGACTTCATGCAGTTTGTTGCTTTTAAAAATTT 3209
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mid03069 3005 .................................................. 3005
sj09683 3210 GTCCAGAATCGTTTTCTGCAGAAGCATGGTCTGTTAGGAGCTTACTGGCC 3259
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mid03069 3005 .................................................. 3005
sj09683 3260 GTAGCAGAAGCAATTGTTTCCTGAATTCTTGACATTTATCTTTGCTGTAT 3309
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mid03069 3005 ...........TAGGACAAGAAGAAAGATAGAACCTTGTTCTGTAGTTTT 3043
| || || |||||| | | || ||
sj09683 3310 TCATTTAGGGCTTGGGAGAGTCCGAAGATAATTCAGTCACTGTCAGATTA 3359
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mid03069 3044 GGAAAATGTAGGGGAAAAAAATTACCAATGTGAATATTGTAAC..GAACT 3091
|| ||| ||| | |||| | ||| |||| | | |
sj09683 3360 ATAATTCTGTCAGGACAAAGAATACCGTTATGATTATTTAATCCTTTAAA 3409
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mid03069 3092 GAGGCTGAAAACAAAGCTGGAGAGAAGGCTGG..CAAGGCAATGTACACA 3139
| | || |||| | || ||| || ||| |
sj09683 3410 ATTGTGGTCTCCAGAGCTTGTTCTCAGAATGGCCCAGACCAAGCCTTAAT 3459
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mid03069 3140 TGACATAGGCTATGGGAACGTTGAGACCATAAGG....ACTGAAACCAGA 3185
|| |||| || || | | || ||||| | | | | |
sj09683 3460 TGTGATAGTGAATATTAA..TGGTCACTTTAAGGAGAAATTATAGGCCAA 3507
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mid03069 3186 GATGAAGACAACTCAATACAGTAAGTCAT..................... 3214
|||||| ||| || | || | | |
sj09683 3508 GATGAAATGAACATAAACCTGTTTGCCCTGGCTTTCAGTGGAAGATGATA 3557
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mid03069 3215 ...............................................ATC 3217
| |
sj09683 3558 TTAGAGACCAAAATCTGGTTCTGAAGGTGTGTATCAGCCCTAAGGTGAAC 3607
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mid03069 3218 CAATCTTAAAACAAACTTCCATTTTAAATTGGTAAATACATTTATGAAAA 3267
|| ||| | | | | | || |||| | | | || | | ||
sj09683 3608 CAGACTTGGGAAAGATTGTCTTTAAAAATCAATGAGTTTATGTTTTAACT 3657
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mid03069 3268 TATTGTATAAGGATAAAGAAAAAGACTA.AAAACACAATATTAAGTAGTA 3316
| | | || | | | ||| || |||| |||||| ||
sj09683 3658 TCTCAGCTTAGTTCTATGCATTGCTCTATAACACACCTAGTTAAGTTTTA 3707
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mid03069 3317 .................................................. 3317
sj09683 3708 TGTTATTCTTGAACTGTGATTTTTTTTCTATTTACTTTCATGGTTTGGTG 3757
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mid03069 3317 .................................................. 3317
sj09683 3758 GGCCATTGTTATGGACTGAATGTTTGTGTCCCACCCTTCACCCCCAAATT 3807
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mid03069 3317 .................................................. 3317
sj09683 3808 CCCGTGTTGAAGCCCCAACCTGCACTGTGGAGCTGGGGCTGCTAAGGAAG 3857
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mid03069 3317 .............CTGGGGTCTGTGCCTGGAGCTGATCCTGTGCCACAGT 3353
|| ||| | || |||||| | |
sj09683 3858 TAATTAAGGTTACATGAAGTCATGGTGGGGCTCTGATCTGCTAAGGTTGG 3907
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mid03069 3354 GCTCCATACCCAAACACTGCTGGGAAAGAACTGGGCTCCCACAAGTGTGG 3403
||| || | | | || || | || ||||
sj09683 3908 TGTCCTTATAGGGAGAGACCCCAGAGAGCTTGTTCCCTCCCTCCCTGTGC 3957
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mid03069 3404 ACAAACCTGTGAGCGCAGGTAAG........................... 3426
| | ||| ||| | ||
sj09683 3958 ATGCAAACAAGAGGGCATGGGAGCACACAGAGAGATGGCAGCCACCTACA 4007
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mid03069 3427 .................................................. 3427
sj09683 4008 AGCCAAGAGGAGAAGCCTCACAATCAAACTCTCGCTGCTGGCGAGAGTCT 4057
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mid03069 3427 .................................................. 3427
sj09683 4058 TGGACTCTGTCTTGGACTTCCAGCCTCCAGACTGTGAGAAACAAATTTCT 4107
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mid03069 3427 ......TCCACCACTCCTGCTCAGAGATATGCACCTGGAACCCTCAGGAC 3470
|| | ||| ||| | | | | | | ||| || ||
sj09683 4108 GTTGTTTCAGCTTCTCAGTCTCTGGTGTTTTGTTATTGCAGCCTGAGAAC 4157
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mid03069 3471 ACAGGAACCAGATGATGAGAGACAACGGCAAGA................. 3503
|||| ||| || | | | | || |
sj09683 4158 ACAGCTGTACGATTATTTGTCAAACAGAAAACACTGATACTTAACAATGC 4207
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mid03069 3504 .................................................. 3504
sj09683 4208 TAATGCAATTATTTATTTGCTTTTCAGTCTCTACAAAACGTTCTAAAACA 4257
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mid03069 3504 .............................ACATAAGCAACAGACACCAAG 3524
||||| || || || |||
sj09683 4258 CTAATCTAAATATTAACAGTAAAATATTTGCATAACTAATGGAAACTAAG 4307
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mid03069 3525 GCCACTTGGCATCA.......................TCAGAACCGAGTT 3551
| | | || | || || ||
sj09683 4308 AAATCATATGACCAATATTTCACTTATTGGTAATCTTACTCTACTGATTT 4357
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mid03069 3552 CTCCAACCACAGTGAGCCATG............................. 3572
| || || |||| ||
sj09683 4358 CCCCCCAGACTGTGATTTTTGAACTTCCTTGCCTTTCTCCTGTCTTTCTG 4407
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mid03069 3573 ..........................................GGGACCCC 3580
|| | ||
sj09683 4408 TGTTTATTCATGGAATTCCAGTTATCTGGGCTTGAAATTGCAGGCTCTCC 4457
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mid03069 3581 ACACACCAGAAAAGCAAGACTCTGGTTTAAAATCAGATCTC......... 3621
|| || ||| ||| ||||| ||||
sj09683 4458 TAACTTAAGCAAAATCTGACAGATCAGCAAAATGAGATAAATGTTTCTTT 4507
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mid03069 3622 .................................................. 3622
sj09683 4508 TTTCTTTCTGACTGCATTAAATCAGATACAACTCAGCATTAAAAAGCTAT 4557
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mid03069 3622 .................................................. 3622
sj09683 4558 CTTTGTAAATGTTGTTACTAATAAATTAGTCTTATAAGATCCCTGGACTT 4607
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mid03069 3622 .................................................. 3622
sj09683 4608 TGGAGTTGTTGCAATGTCTTTGAGAGTAATTCTTTAAAAGTCTAATTTCG 4657
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mid03069 3622 .................................................. 3622
sj09683 4658 ACTGGTTGTATCTCTTTATGATTTATTGCCCCACTAACAACATTTGAAAC 4707
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mid03069 3622 .................................................. 3622
sj09683 4708 AATATAATATTTTAAAATGTATAAATAATTATGAATTTTTGTTTAGAACA 4757
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mid03069 3622 .................................................. 3622
sj09683 4758 AAGAGGATTACTGATATTTGTTTCCCTATGAATGGCAAAAGGTTTAGCTT 4807
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mid03069 3622 .................................................. 3622
sj09683 4808 ACTACTGCATTTCTGTTTTAAATAAAAAGTTGAGAGTTTGTGTCTCATTA 4857
5001 ----+ 5005
mid03069 3622 ..... 3622
sj09683 4858 AACTG 4862