# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mid02071.fasta.nr -Q ../query/mKIAA0033.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0033, 291 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919930 sequences Expectation_n fit: rho(ln(x))= 4.6291+/-0.00018; mu= 11.9856+/- 0.010 mean_var=70.2198+/-13.873, 0's: 36 Z-trim: 47 B-trim: 0 in 0/69 Lambda= 0.153054 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26354929|dbj|BAC41091.1| unnamed protein produc ( 291) 1891 426.3 3.1e-117 gi|148688958|gb|EDL20905.1| mCG1032781 [Mus muscul ( 291) 1882 424.3 1.2e-116 gi|74151271|dbj|BAE38770.1| unnamed protein produc ( 291) 1874 422.6 4.2e-116 gi|81882828|sp|Q5FVN2.1|TM41B_RAT RecName: Full=Tr ( 291) 1840 415.0 7.7e-114 gi|149719436|ref|XP_001504961.1| PREDICTED: simila ( 291) 1739 392.7 4e-107 gi|73988453|ref|XP_851421.1| PREDICTED: similar to ( 291) 1728 390.3 2.1e-106 gi|148753336|gb|AAI42214.1| TMEM41B protein [Bos t ( 291) 1728 390.3 2.1e-106 gi|74741383|sp|Q5BJD5.1|TM41B_HUMAN RecName: Full= ( 291) 1704 385.0 8.4e-105 gi|75042105|sp|Q5RBZ8.1|TM41B_PONAB RecName: Full= ( 291) 1701 384.4 1.3e-104 gi|194382464|dbj|BAG64402.1| unnamed protein produ ( 291) 1695 383.0 3.3e-104 gi|224050776|ref|XP_002197459.1| PREDICTED: transm ( 280) 1527 345.9 4.8e-93 gi|82081204|sp|Q5ZIL6.1|TM41B_CHICK RecName: Full= ( 269) 1515 343.3 2.9e-92 gi|62858679|ref|NP_001016955.1| hypothetical prote ( 278) 1474 334.2 1.6e-89 gi|82180006|sp|Q5U4K5.1|TM41B_XENLA RecName: Full= ( 278) 1473 334.0 1.8e-89 gi|26330556|dbj|BAC29008.1| unnamed protein produc ( 224) 1466 332.4 4.6e-89 gi|150416162|sp|A4II98.1|TM41B_XENTR RecName: Full ( 278) 1460 331.1 1.3e-88 gi|149068329|gb|EDM17881.1| rCG40056, isoform CRA_ ( 224) 1448 328.4 7.3e-88 gi|150416161|sp|A1A5V7.1|TM41B_DANRE RecName: Full ( 282) 1355 307.9 1.3e-81 gi|74184887|dbj|BAE39064.1| unnamed protein produc ( 206) 1348 306.3 3e-81 gi|26330636|dbj|BAC29048.1| unnamed protein produc ( 199) 1291 293.7 1.8e-77 gi|119589004|gb|EAW68598.1| transmembrane protein ( 203) 1163 265.4 6e-69 gi|198434194|ref|XP_002130177.1| PREDICTED: simila ( 433) 1089 249.4 8.4e-64 gi|210114320|gb|EEA62080.1| hypothetical protein B ( 236) 1032 236.5 3.4e-60 gi|210116162|gb|EEA63908.1| hypothetical protein B ( 236) 1031 236.3 3.9e-60 gi|156549222|ref|XP_001604069.1| PREDICTED: simila ( 308) 1014 232.7 6.4e-59 gi|108874161|gb|EAT38386.1| conserved hypothetical ( 312) 1010 231.8 1.2e-58 gi|215490607|gb|EEC00250.1| transmembrane protein ( 214) 998 229.0 5.7e-58 gi|108868942|gb|EAT33167.1| conserved hypothetical ( 255) 991 227.5 1.9e-57 gi|157018606|gb|EAA06878.3| AGAP000769-PA [Anophel ( 314) 987 226.7 4.1e-57 gi|167878980|gb|EDS42363.1| conserved hypothetical ( 287) 976 224.3 2e-56 gi|212507057|gb|EEB11103.1| conserved hypothetical ( 277) 973 223.6 3.2e-56 gi|221114642|ref|XP_002165863.1| PREDICTED: simila ( 271) 971 223.1 4.2e-56 gi|156215912|gb|EDO36860.1| predicted protein [Nem ( 224) 962 221.1 1.5e-55 gi|48104218|ref|XP_392926.1| PREDICTED: similar to ( 259) 961 220.9 1.9e-55 gi|91081017|ref|XP_975236.1| PREDICTED: similar to ( 259) 957 220.0 3.5e-55 gi|190619543|gb|EDV35067.1| GF22553 [Drosophila an ( 320) 942 216.8 4e-54 gi|193901501|gb|EDW00368.1| GH11899 [Drosophila gr ( 332) 936 215.5 1e-53 gi|74871457|sp|Q9VX39.2|TM41_DROME RecName: Full=T ( 320) 929 213.9 2.9e-53 gi|194189038|gb|EDX02622.1| GE15585 [Drosophila ya ( 316) 926 213.3 4.6e-53 gi|194204647|gb|EDX18223.1| GD17353 [Drosophila si ( 314) 924 212.8 6.2e-53 gi|193908978|gb|EDW07845.1| GI14632 [Drosophila mo ( 251) 921 212.1 8.4e-53 gi|190649226|gb|EDV46504.1| GG18175 [Drosophila er ( 320) 922 212.4 8.6e-53 gi|194149797|gb|EDW65488.1| GJ19283 [Drosophila vi ( 359) 921 212.2 1.1e-52 gi|198146538|gb|EAL31855.2| GA21055 [Drosophila ps ( 341) 917 211.3 1.9e-52 gi|194167808|gb|EDW82709.1| GK24991 [Drosophila wi ( 332) 900 207.5 2.6e-51 gi|74960174|sp|O62126.1|TM41_CAEEL RecName: Full=T ( 246) 869 200.6 2.4e-49 gi|193698859|ref|XP_001949278.1| PREDICTED: simila ( 274) 868 200.4 3e-49 gi|190589349|gb|EDV29371.1| hypothetical protein T ( 247) 850 196.4 4.4e-48 gi|187023570|emb|CAP37294.1| C. briggsae CBR-TAG-1 ( 234) 848 195.9 5.7e-48 gi|90084047|dbj|BAE90974.1| unnamed protein produc ( 127) 795 184.0 1.2e-44 >>gi|26354929|dbj|BAC41091.1| unnamed protein product [M (291 aa) initn: 1891 init1: 1891 opt: 1891 Z-score: 2261.0 bits: 426.3 E(): 3.1e-117 Smith-Waterman score: 1891; 99.313% identity (99.656% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|263 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSQYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE ::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|263 SFVAIKAGTTLHQLTTAGEAVPWSSVFILMVLALLSILPAIFQKQLKQKFE 250 260 270 280 290 >>gi|148688958|gb|EDL20905.1| mCG1032781 [Mus musculus] (291 aa) initn: 1882 init1: 1882 opt: 1882 Z-score: 2250.3 bits: 424.3 E(): 1.2e-116 Smith-Waterman score: 1882; 98.625% identity (100.000% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|148 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQILVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE :::::::::::.::::::::::::::::::::.:::::::::::.:::::: gi|148 SFVAIKAGTTLYQLTTAGEAVSWSSVFILMVLTLLSILPAIFQKKLKQKFE 250 260 270 280 290 >>gi|74151271|dbj|BAE38770.1| unnamed protein product [M (291 aa) initn: 1874 init1: 1874 opt: 1874 Z-score: 2240.7 bits: 422.6 E(): 4.2e-116 Smith-Waterman score: 1874; 98.282% identity (99.656% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|741 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPDSKDHLNEKPCAEAGSARTSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE :::::::::::.:::::::::::.::::::.:::::::::::::.:::::: gi|741 SFVAIKAGTTLYQLTTAGEAVSWNSVFILMILALLSILPAIFQKKLKQKFE 250 260 270 280 290 >>gi|81882828|sp|Q5FVN2.1|TM41B_RAT RecName: Full=Transm (291 aa) initn: 1840 init1: 1840 opt: 1840 Z-score: 2200.1 bits: 415.0 E(): 7.7e-114 Smith-Waterman score: 1840; 96.564% identity (99.313% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :::::::.:: :::::::::::::: ::::::::.::::.::::.::::::::::::::: gi|818 MAKGRVAERSQTEMLHSTPAGDRAVGTQGSAAPGNKDHLKEKPCVEAGSARTSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE :::::::::::.:::::::::::.::::::.:::::::::::::.:::::: gi|818 SFVAIKAGTTLYQLTTAGEAVSWNSVFILMILALLSILPAIFQKKLKQKFE 250 260 270 280 290 >>gi|149719436|ref|XP_001504961.1| PREDICTED: similar to (291 aa) initn: 1739 init1: 1739 opt: 1739 Z-score: 2079.6 bits: 392.7 E(): 4e-107 Smith-Waterman score: 1739; 91.409% identity (96.220% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :::::::.:: : ::.::::..:. :.: .::: :::.:: :::::::: :::::::: gi|149 MAKGRVAERSQTGALHTTPAGEKAAGTRGPTAPGRGDHLKEKACAEAGSARMSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT : :::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FLSAAFVMFLVYQNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE :::::::::::.:::::::::::.:::.::.:::::::::::::.:::::: gi|149 SFVAIKAGTTLYQLTTAGEAVSWNSVFVLMILALLSILPAIFQKKLKQKFE 250 260 270 280 290 >>gi|73988453|ref|XP_851421.1| PREDICTED: similar to tra (291 aa) initn: 1728 init1: 1728 opt: 1728 Z-score: 2066.5 bits: 390.3 E(): 2.1e-106 Smith-Waterman score: 1728; 91.409% identity (95.876% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :::::::.:: : ::.: .::::. : : ..::. :::.:: :::::::: :::::::: gi|739 MAKGRVAERSQTGALHTTAVGDRAAATPGLTTPGNGDHLKEKACAEAGSARMSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE :::::::::::.:::::::::::.:::.:::::.::::::::::.:::::: gi|739 SFVAIKAGTTLYQLTTAGEAVSWNSVFVLMVLAFLSILPAIFQKKLKQKFE 250 260 270 280 290 >>gi|148753336|gb|AAI42214.1| TMEM41B protein [Bos tauru (291 aa) initn: 1728 init1: 1728 opt: 1728 Z-score: 2066.5 bits: 390.3 E(): 2.1e-106 Smith-Waterman score: 1728; 90.378% identity (96.564% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :.:::...:: : ::::: ::.:. :.: ..:.:.:::.:: :::::::: :::::::: gi|148 MTKGRAVERSQTAALHSTPPGDKATGTRGPSTPSSRDHLKEKACAEAGSARMSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT : ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|148 FLSAAFVMFLVYKNFPQLSEEERMNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE :::::::::::.:::::::::::.:::.::.:::::::::::::.:::::: gi|148 SFVAIKAGTTLYQLTTAGEAVSWNSVFVLMILALLSILPAIFQKKLKQKFE 250 260 270 280 290 >>gi|74741383|sp|Q5BJD5.1|TM41B_HUMAN RecName: Full=Tran (291 aa) initn: 1704 init1: 1704 opt: 1704 Z-score: 2037.8 bits: 385.0 E(): 8.4e-105 Smith-Waterman score: 1704; 90.378% identity (95.189% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :::::::.:: :.::.:: :. :.: :::::.:: .:: .:::::: :::::::: gi|747 MAKGRVAERSQLGAHHTTPVGDGAAGTRGLAAPGSRDHQKEKSWVEAGSARMSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE :::::::::::.:::::::::::.:.::::.::.::::::::::.:::::: gi|747 SFVAIKAGTTLYQLTTAGEAVSWNSIFILMILAVLSILPAIFQKKLKQKFE 250 260 270 280 290 >>gi|75042105|sp|Q5RBZ8.1|TM41B_PONAB RecName: Full=Tran (291 aa) initn: 1701 init1: 1701 opt: 1701 Z-score: 2034.3 bits: 384.4 E(): 1.3e-104 Smith-Waterman score: 1701; 90.378% identity (94.845% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :::::::.:: :.::.:: :. :.: :::::.:. .:: ::::::: :::::::: gi|750 MAKGRVAERSQMGADHTTPVGDGAAGTRGPAAPGSRDYQKEKSWAEAGSARMSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE ::::::::::::: :::::::::.:.::::.::.::::::::::.:::::: gi|750 SFVAIKAGTTLHQPTTAGEAVSWNSIFILMILAVLSILPAIFQKKLKQKFE 250 260 270 280 290 >>gi|194382464|dbj|BAG64402.1| unnamed protein product [ (291 aa) initn: 1695 init1: 1695 opt: 1695 Z-score: 2027.1 bits: 383.0 E(): 3.3e-104 Smith-Waterman score: 1695; 90.034% identity (94.845% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 mKIAA0 MAKGRVADRSPTEMLHSTPAGDRAVRTQGSAAPGSKDHLNEKPCAEAGSARTSLLILVSI :::::::.:: :.::.:: :. :.: :::::.:: .:: .:::::: :::::::: gi|194 MAKGRVAERSQLGAHHTTPVGDGAAGTRGLAAPGSRDHQKEKSWVEAGSARMSLLILVSI 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 FSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFAT 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|194 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGDAPP 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 SFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQLKQKFE :::::::::::.:::::::::::.:.::::.::.::::::::::.:::::: gi|194 SFVAIKAGTTLYQLTTAGEAVSWNSIFILMILAVLSILPAIFQKKLKQKFE 250 260 270 280 290 291 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 14:05:13 2009 done: Thu Mar 12 14:10:52 2009 Total Scan time: 785.360 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]