Comparison of KIAA cDNA sequences between mouse and human (KIAA0033)
<<Original sequence data>>
mouse mKIAA0033 (mid02071) length: 2338 bp, CDS: 141 - 1043
human KIAA0033 (ha02009) length: 3269 bp, CDS: 2 - 1009
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 30 - 142 79 29 26.9
CDS: 143 - 1045 784 119 13.2
3'UTR: 1046 - 3311 825 465 36.0
amino acid
CDS: 143 - 1045 267 34 11.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
V V S G E V V
mid02071 1 GAAGGCTCCGCCGAGTGTCAAGTTTTCGAGGTCGTCTCAGGTGAGGTGGT 50
||||||||| ||||||| |||
ha02009 1 .............................GGTCGTCTCGGGTGAGGAGGT 21
V V S G E E V
51 ----+----*----+----*----+----*----+----*----+----* 100
V P E V V - L A P G C * K K A A
mid02071 51 CGTGCCGGAAGTAGTTGT..GCCTCGCGCCTGGGTGTTGAAAGAAAGCTG 98
|| ||||||||| | | | | | |||| | || || | ||| | |||
ha02009 22 CGCGCCGGAAGTGGCTCTAGCCGTGGCGCTTCGGCGTAGTAAGGAGCCTG 71
A P E V A L A V A L R R S K E P A
101 ----+----*----+----*----+----*----+----*----+----* 150
G E L * S L G G A A P E L F
mid02071 99 CGGGAGGAGCTTTAGTCATTCAAGGGGGCGCGGCACCAGTAGGAGCTCTT 148
| | ||| ||| | || ||||||||||||||| | | | ||
ha02009 72 CAACA.GAGTTTTGTTGTTT..AGGGGGCGCGGCACC....GCACCGCTC 114
T E F C C L G G A A P H R S
151 ----+----*----+----*----+----*----+----*----+----* 200
A A P A A A M A K G R V A D R S P
mid02071 149 CGCGGCCCCCGCAGCAGCCATGGCGAAAGGCAGAGTGGCTGATCGATCGC 198
| || |||||||||||||||||||||||||| || || |||||||
ha02009 115 CCTTCACCTTGCAGCAGCCATGGCGAAAGGCAGAGTCGCCGAACGATCGC 164
L H L A A A M A K G R V A E R S Q
201 ----+----*----+----*----+----*----+----*----+----* 250
T E M L H S T P A G D R A V R T
mid02071 199 CCACCGAAATGTTGCACTCGACCCCAGCCGGGGACCGGGCAGTGAGGACC 248
| ||| ||||||| | |||||| |||||| | ||||
ha02009 165 AGTTGGGCGCTCACCACACGACCCCCGTGGGGGACGGGGCAGCGGGGACG 214
L G A H H T T P V G D G A A G T
251 ----+----*----+----*----+----*----+----*----+----* 300
Q G S A A P G S K D H L N E K P C
mid02071 249 CAGGGTTCCGCCGCGCCTGGCAGCAAAGATCATCTGAACGAAAAGCCTTG 298
| |||| ||| ||||||||||||| ||| || | ||| ||||| | ||
ha02009 215 CGGGGTCTCGCGGCGCCTGGCAGCAGAGACCACCAGAAGGAAAAATCCTG 264
R G L A A P G S R D H Q K E K S W
301 ----+----*----+----*----+----*----+----*----+----* 350
A E A G S A R T S L L I L V S I F
mid02071 299 TGCAGAAGCTGGATCAGCAAGAACATCACTCCTTATACTGGTGTCCATTT 348
| |||||||||||||||||||| |||||||||||| ||||||||||||
ha02009 265 GGTAGAAGCTGGATCAGCAAGAATGTCACTCCTTATATTGGTGTCCATTT 314
V E A G S A R M S L L I L V S I F
351 ----+----*----+----*----+----*----+----*----+----* 400
S C A A F V M F L V Y K N F P Q
mid02071 349 TTTCATGTGCAGCTTTTGTTATGTTTTTGGTATATAAAAATTTTCCTCAG 398
| | || |||||||||||||||||||||||||||||||||||||||||||
ha02009 315 TCTTATCTGCAGCTTTTGTTATGTTTTTGGTATATAAAAATTTTCCTCAG 364
L S A A F V M F L V Y K N F P Q
401 ----+----*----+----*----+----*----+----*----+----* 450
L S E E E R V N M K V P R D M D D
mid02071 399 CTTAGTGAGGAAGAGAGGGTGAATATGAAGGTTCCGAGAGATATGGATGA 448
|||||||| ||||| || ||||||||||||||||| ||||||||||||||
ha02009 365 CTTAGTGAAGAAGAAAGAGTGAATATGAAGGTTCCCAGAGATATGGATGA 414
L S E E E R V N M K V P R D M D D
451 ----+----*----+----*----+----*----+----*----+----* 500
A K A L G K V L S K Y K D T F Y V
mid02071 449 CGCCAAGGCTCTAGGAAAAGTTCTCTCCAAATATAAGGATACCTTTTATG 498
||||||||||||||||||||| | |||||||| ||||| ||||||||||
ha02009 415 TGCCAAGGCTCTAGGAAAAGTTTTATCCAAATACAAGGACACCTTTTATG 464
A K A L G K V L S K Y K D T F Y V
501 ----+----*----+----*----+----*----+----*----+----* 550
Q V L V A Y F A T Y I F L Q T F
mid02071 499 TACAAGTATTGGTTGCTTATTTTGCTACATATATTTTTTTGCAAACATTT 548
| |||||| | || ||||||||||||||||||||||| ||||||||||||
ha02009 465 TTCAAGTACTTGTAGCTTATTTTGCTACATATATTTTCTTGCAAACATTT 514
Q V L V A Y F A T Y I F L Q T F
551 ----+----*----+----*----+----*----+----*----+----* 600
A I P G S I F L S I L S G F L Y P
mid02071 549 GCTATCCCAGGTTCCATATTCCTCAGTATACTCTCCGGGTTCCTTTATCC 598
||||| ||||| || ||||| |||||||||||||| ||||| ||||||||
ha02009 515 GCTATTCCAGGCTCTATATTTCTCAGTATACTCTCAGGGTTTCTTTATCC 564
A I P G S I F L S I L S G F L Y P
601 ----+----*----+----*----+----*----+----*----+----* 650
F P L A L F L V C L C S G L G A S
mid02071 599 CTTCCCACTTGCCTTATTCCTTGTTTGTTTGTGCTCCGGACTTGGTGCCT 648
||| ||||| |||||||| |||||||||||||| || |||||||||||||
ha02009 565 CTTTCCACTAGCCTTATTTCTTGTTTGTTTGTGTTCTGGACTTGGTGCCT 614
F P L A L F L V C L C S G L G A S
651 ----+----*----+----*----+----*----+----*----+----* 700
F C Y M L S Y L V G R P V V Y K
mid02071 649 CATTCTGCTACATGCTCTCCTACTTAGTTGGAAGACCCGTTGTATACAAA 698
| ||||| || ||||| ||||| |||||||| ||||| ||||||||||||
ha02009 615 CTTTCTGTTATATGCTTTCCTATTTAGTTGGGAGACCAGTTGTATACAAA 664
F C Y M L S Y L V G R P V V Y K
701 ----+----*----+----*----+----*----+----*----+----* 750
Y L T E K A V K W S Q Q V E R H R
mid02071 699 TACCTAACAGAGAAGGCAGTGAAATGGTCACAGCAGGTAGAGCGTCACAG 748
|||||||||||||| ||||| ||||||||||||||||| || ||||| ||
ha02009 665 TACCTAACAGAGAAAGCAGTAAAATGGTCACAGCAGGTTGAACGTCATAG 714
Y L T E K A V K W S Q Q V E R H R
751 ----+----*----+----*----+----*----+----*----+----* 800
E H L I N Y I I F L R I T P F L P
mid02071 749 AGAACATCTTATTAACTACATTATATTTTTGAGGATCACACCGTTTCTTC 798
||||||||| ||||||||||||||||||||||| || ||||| ||||| |
ha02009 715 AGAACATCTCATTAACTACATTATATTTTTGAGAATAACACCATTTCTGC 764
E H L I N Y I I F L R I T P F L P
801 ----+----*----+----*----+----*----+----*----+----* 850
N W F I N I T S P V I N V P L K
mid02071 799 CTAATTGGTTTATTAATATTACATCTCCTGTGATAAATGTACCATTGAAA 848
||||||||||||||||||| ||||||||||||||||| || |||||||||
ha02009 765 CTAATTGGTTTATTAATATCACATCTCCTGTGATAAACGTGCCATTGAAA 814
N W F I N I T S P V I N V P L K
851 ----+----*----+----*----+----*----+----*----+----* 900
V F F I G T F L G V A P P S F V A
mid02071 849 GTGTTTTTTATTGGCACTTTTCTAGGTGTTGCACCTCCTTCTTTTGTAGC 898
|| ||||||||||| |||||||||||||||||||||||||||||||||||
ha02009 815 GTTTTTTTTATTGGTACTTTTCTAGGTGTTGCACCTCCTTCTTTTGTAGC 864
V F F I G T F L G V A P P S F V A
901 ----+----*----+----*----+----*----+----*----+----* 950
I K A G T T L H Q L T T A G E A V
mid02071 899 AATCAAGGCAGGAACAACTCTGCATCAGCTTACAACAGCAGGGGAAGCTG 948
|| |||||||||||||| ||| |||| |||||||||||||| |||||||
ha02009 865 CATTAAGGCAGGAACAACACTGTATCAACTTACAACAGCAGGAGAAGCTG 914
I K A G T T L Y Q L T T A G E A V
951 ----+----*----+----*----+----*----+----*----+----* 1000
S W S S V F I L M V L A L L S I
mid02071 949 TTTCCTGGAGCTCGGTATTTATTCTGATGGTTTTGGCCCTTCTTTCTATC 998
||||||||| ||| |||||||||||||| | ||||| ||||||||||
ha02009 915 TTTCCTGGAACTCAATATTTATTCTGATGATCTTGGCTGTTCTTTCTATT 964
S W N S I F I L M I L A V L S I
1001 ----+----*----+----*----+----*----+----*----+----* 1050
L P A I F Q K Q L K Q K F E *
mid02071 999 CTGCCAGCCATCTTCCAAAAACAACTAAAGCAGAAGTTTGAGTGAAAAGA 1048
||||||||||||||||||||| ||||||||||||| ||||||| |||| |
ha02009 965 CTGCCAGCCATCTTCCAAAAAAAACTAAAGCAGAAATTTGAGTAAAAATA 1014
L P A I F Q K K L K Q K F E *
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mid02071 1049 CATGGCTTTTCCTTTACCACCGCCATCACTCCTGCCACCACCACTGTCAT 1098
|| | || | | ||| || ||||| |
ha02009 1015 ATCATCTGATTTTT..........AGTTTTGCTGTCATCACCA......T 1048
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mid02071 1099 CTCAGGATTAGCAGGTGTATTCATGTTACGTTTGGACATCACCTCTTCAG 1148
|||||||||| ||| || || ||| ||| |||| | |||||||||||||
ha02009 1049 CTCAGGATTAACAGATGCATCCAT.TTATGTTTTAAAATCACCTCTTCAG 1097
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mid02071 1149 TCACTGAAAGAAGGACTTGTAAAGTAAAATAGCCCATGAGAGAG...... 1192
| | | || | | | ||||||| |||||| || || ||| ||
ha02009 1098 TAATTAAACAAGGAATTTGTAAAATAAAATTTCCTATCAGATAGTTAAAG 1147
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mid02071 1193 .AATGCACATATGGG...................AGAACAGAAGTTGGGG 1222
||| || || | | | || ||| ||||
ha02009 1148 TAATACATTTAAGTGACAAGGGGAGAAGAAAGTAAAAATGGAAATTGGTA 1197
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mid02071 1223 CCCTATGAGAAGTGCTGTC...ACCTGCACCTGACCTGTGAG........ 1261
|| ||| ||||||| || | | ||| | | ||
ha02009 1198 TACTGTGAAAAGTGCTATCAATAGTTAAGGTAGACATCTTAGACATCTTA 1247
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mid02071 1262 ..AGTCACTGTTCCAGGGTTAGCTCTGAGACATCACTCATTGTCTTGGTT 1309
| | | | | ||| || ||||| | || | | ||||
ha02009 1248 TAAATTATTATACCAAGGGTAGCTGTAGATAAT.....AGTAGTGTGGTA 1292
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mid02071 1310 TGGAATTCTTACTCTAAATGATTCATTTGAAGTGTTTTCCTCTTACATCT 1359
| |||| || || | | ||||||| | | || | || | |
ha02009 1293 GGAAATTGTTGATCCAGCTAATTCATTCAATTTAATTGAATATTTTTTAT 1342
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mid02071 1360 GACTAATGACTAAAATCGTGAACTCAGGTACAGTGGAACATACTTAAAAC 1409
|||| |||||||| | | | | | | | || || |||
ha02009 1343 CTTTAATAACTAAAATAGATATTT....TTAAATTCTAGATTTTTTAAAG 1388
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mid02071 1410 TCCAGCTGCCCGGGAGGCTAAGGCTAGCTGTGAAAGTCACAAGACACCCT 1459
| | ||| | | ||| | ||| | ||| | | | ||
ha02009 1389 TAGTGTTGCAGGTTTTGTTAATGTTAG..GCTTTTTTCAGAGCATAAACT 1436
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mid02071 1460 GTATTAAAGTAAAA.................................... 1473
| | | ||||
ha02009 1437 GGAAAACTTAAAAAGAGATTTACATTTTCTTCCTCTTTTTTTTTTTTTTT 1486
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mid02071 1474 .................................................. 1474
ha02009 1487 TTTTCTGTTTTGAGACGGAGTCTAGCTCTGCCGCCCAGGCTGGAGTGCAG 1536
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mid02071 1474 .................................................. 1474
ha02009 1537 TGGCGCGATCTCCGCTCATTGCAAGCTCCACCTCCTGGGTTCACGCCATT 1586
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mid02071 1474 .................TAAGGAACAGTGAAGATAAAATAAAATAAAAAT 1506
| || | | | || | | | ||
ha02009 1587 CTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACCAT 1636
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mid02071 1507 TCAGAGC.ACAAACCAAATACTTGAAGCAAAAATGAGTTTT......... 1546
| ||| | || || || | | | | | |||
ha02009 1637 GCCCAGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTT 1686
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mid02071 1547 .................................................. 1547
ha02009 1687 AGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTTGGCCT 1736
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mid02071 1547 ...........................................CATTTTC 1553
|||||||
ha02009 1737 CCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCCATTTTC 1786
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mid02071 1554 TTTCTCTTTTCAGACA..................GCACTTTCCATAGGCC 1585
|| ||||||| || | | | | ||| |
ha02009 1787 TTCCTCTTTTGAGGTAATGGATTTGTTTGGAGATGGCATGTTAGTAGACG 1836
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mid02071 1586 AGTGTATGTAGCAATGATGGC.....................TTATTTAA 1614
| || || | | || ||| | ||||||
ha02009 1837 ACTGAATATGGAAAGGATATCGAGTTATCTATTTTGTTAATTTTATTTTT 1886
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mid02071 1615 GTTTT...CCTTGGAAATTTGTATCATGGATTAGTCCAATAATTTGAATT 1661
||||| | | | |||| ||||||||||||||| | | || | ||
ha02009 1887 GTTTTTTATCATCTAGATTTTTATCATGGATTAGTCTGAAATTTAAAGTT 1936
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mid02071 1662 CTGGCCAGTCTGTTTTCATCCTTTTTTCTAGGTTTTGCAGTATTTCCACC 1711
|||||||||| |||||| | | | || ||| |||| ||||||||||||
ha02009 1937 CTGGCCAGTCGGTTTTCTTTC.ATCTTGTAGTTTTTACAGTATTTCCACT 1985
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mid02071 1712 ATACATATAGAAAAGGAGAATTATATATCTGTATCATAT........... 1750
| ||||| |||| | | |||| ||| |||||||||||
ha02009 1986 GTGCATATGCAAAATGGGTATTACATAACTGTATCATATTTGGTATTGAT 2035
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mid02071 1751 .................................................. 1751
ha02009 2036 AATTTTTTTTTTTTTTGAGACGGAGTCTTGCTGTTGCCCAGGCTGGAGTG 2085
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mid02071 1751 .................................................. 1751
ha02009 2086 GAGTGCGTGGTGTGATCTCGGCTCACTGCAAACTCCGCCTCCTGGGTTCA 2135
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mid02071 1751 .................................................. 1751
ha02009 2136 AGCGATTCTCCTGGCCCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTG 2185
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mid02071 1751 .................................................. 1751
ha02009 2186 CCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACC 2235
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mid02071 1751 .................................................. 1751
ha02009 2236 ATGTTGGCCGGGCTGGTCTTGAACTCCTGACCTCAGGCTATATGCCCACT 2285
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mid02071 1751 .................................................. 1751
ha02009 2286 TCCACCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCCAGCC 2335
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mid02071 1751 TGGTGTTGATAATGTATATTAAGATAATGATATTTTGTTACAGTGTCTTT 1800
|||| |||||||| |||||| |||||| ||||||| | |||||
ha02009 2336 TGGTATTGATAATTTATATTCAGATAA......TTTGTTA.TGGCTCTTT 2378
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mid02071 1801 ATTATCTCAAAGGGGGTTCT..AAAGTAAATACTCAA.AGCATATACTTT 1847
| |||| || | |||| ||| |||| ||| | |||| || || || |||
ha02009 2379 AATATCCCACAAGGGGCTCTAAAAAGCAAACATTCAAGAGTATGTAGTTT 2428
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mid02071 1848 TTAGACATTATTTTA..TACTGAAACAACTGACAGTAGGTAGGACATTAC 1895
|||||||||| ||| || | || | ||||| | | ||| |
ha02009 2429 TTAGACATTAAGTTAATTATTTTAAACAGTGACA....GCAAAACACAAG 2474
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mid02071 1896 TGATTAAATCTAGTTTATTTGTTCCAATGACTGTAAAATTTGCCTCATAG 1945
||||||||| ||||||||||||||||||||| |||| ||| ||||||
ha02009 2475 TGATTAAATATAGTTTATTTGTTCCAATGAC..TAAATTTTACCTCATTT 2522
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mid02071 1946 ATT.GTCTGGTCATTAAAGAATGTAT............TGTAATTA..CC 1980
||| |||||||||||| |||| ||| |||||||| |
ha02009 2523 ATTAATCTGGTCATTAAGGAATATATTTAATAATATTATGTAATTATTCT 2572
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mid02071 1981 TTTCATGCATGATACATCTGCGATTGCTCTGTTGCCTTTCCTCTGATGAC 2030
||| |||||||||||| || || | || |||| ||||| |
ha02009 2573 TTTTATGCATGATACACCT.AGAAAAATGCCTTTTGTTTCTATTGATGGC 2621
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mid02071 2031 ....CTCCTTGGGGCAGCACTTGA....TTGGTACACTTTGCCAACTGTA 2072
| |||| || | |||| || | || ||| |||| |
ha02009 2622 TTTGTTGTTTGGAGCTACTTTTGATTACTTATTGCAGTTTCCCAA...TT 2668
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mid02071 2073 AAGCTTCTACTTTCTC.....................ACCTTGACATGGT 2101
|| | |||||| || | ||||||
ha02009 2669 TAGTCTTTACTTTATCTAACTCACAAAGTAAAATTAACTGATCACATGGC 2718
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mid02071 2102 GACTGGTGTCTCCCATTTCTT.........GGAGCCTCCCTTTGGCTGCT 2142
||| ||| | | | || || | | ||| ||||||
ha02009 2719 AACTACTGTATTTAAATAGTTCTGGAAAAATGAAAGTGCTTTTTGCTGCT 2768
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mid02071 2143 ...................TTTGTTCCCTGCC...AGGACAGA.CCCATG 2169
|| |||| || | |||||| | | ||
ha02009 2769 TGGTAAATGGGTAATGCCCTTGATTCCTTGACTGTAGGACATAGCTGATC 2818
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mid02071 2170 TAAAGCACT.........................AAGATCTCCGTTGGTA 2194
||||| ||| | | |||| |
ha02009 2819 TAAAGTACTCTGTCAGTTTTACCTTCACCCATGACTGTCATTAGTTGTCA 2868
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mid02071 2195 TGTTGAACACTTGCTTTAGTGGAGTGGGAGTCCTTGTGTCTT........ 2236
| | | | |||||| | | | | ||||||| | ||
ha02009 2869 AAGTTGAAAAGTACTTTAGCTGTG.AGAAATCCTTGTATGTTTTTATTAT 2917
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mid02071 2237 .CAAAGTCTGATCAT.CTCAAAGCCTGTTTCTCCTGCAAAGTGTGGACTA 2284
| || | ||||| |||||||||||||| | | || ||||||||
ha02009 2918 AAGAGGTATAATCATCCTCAAAGCCTGTTTTTATTACATGATGTGGACTG 2967
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mid02071 2285 ATCCTTCTCTGT...................................... 2296
|| || | | |
ha02009 2968 ATTATTTTTTCTATCACAGTGTTAACAGATGGATTTTATTGTAAATACAA 3017
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mid02071 2297 .................................................. 2297
ha02009 3018 AGAAAACATATTGATTATTGTAGTATTCTTATGTCACCTGGCCTTTTGCG 3067
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mid02071 2297 .................................................. 2297
ha02009 3068 TGAGGATTATTTATTATTTCTAGCAAGGCTTTCTTCCTTTCTTATTGCCC 3117
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mid02071 2297 .................................................. 2297
ha02009 3118 AGAGACTGACTGATACATCTTTTGTTATTTTTACACATAAATTAAACATA 3167
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mid02071 2297 ...................CGCAGTATTAATGTTACAAATACAAGGAAGA 2327
| | ||||||||| |||| || ||
ha02009 3168 GCCTTTTTGGACAAATTCACTAAATATTAATGTATAAAATGTAATTGAGT 3217
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mid02071 2328 TAATACTGATC....................................... 2338
||| | |||
ha02009 3218 AAATTTTTATCAGAATTTTAAAAATAAAAGAGCTTAGACTCAGTAGGAAC 3267
3351 -- 3352
mid02071 2339 .. 2339
ha02009 3268 TC 3269