FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4019.ptfa, 686 aa vs ./tmplib.26680 library 1768331 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.9200+/-0.0069; mu= 2.6513+/- 0.459 mean_var=230.2066+/-54.739, 0's: 0 Z-trim: 10 B-trim: 18 in 1/35 Lambda= 0.0845 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0148 ( 722 res) mbj00784 ( 722) 1705 221 3.2e-58 mKIAA1099 ( 981 res) mfj15083 ( 981) 215 39 0.002 mKIAA0167 ( 1029 res) mfj34112 (1029) 203 38 0.0056 >>mKIAA0148 ( 722 res) mbj00784 (722 aa) initn: 2333 init1: 970 opt: 1705 Z-score: 1137.6 bits: 221.0 E(): 3.2e-58 Smith-Waterman score: 2284; 58.655% identity (71.304% ungapped) in 699 aa overlap (2-683:128-719) 10 20 30 mKIAA4 QVQSGRRKANPQDKVHPIKSEFIRAKYQMLA ..:::::::::::::: :.::::::::::: mKIAA0 WPPTLLQMVETLYNNGANSIWEHSLLDPASIMSGRRKANPQDKVHPNKAEFIRAKYQMLA 100 110 120 130 140 150 40 50 60 70 80 90 mKIAA4 FVHKLPCRDDDGVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGTTPLHVAA :::.::::.::.::::::::::::::::::::::::::::::::::::::::.::::::. mKIAA0 FVHRLPCREDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGSTPLHVAS 160 170 180 190 200 210 100 110 120 130 140 150 mKIAA4 KAGQTLQAELLVVYGADPGSPDVNGRTPIDYARQAGHHELAERLVECQYELTDRLAFYLC :::: ::::::.:::::::. : .:.::.:::::.:::::::::.: ::::::::::::: mKIAA0 KAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLIEIQYELTDRLAFYLC 220 230 240 250 260 270 160 170 180 190 200 210 mKIAA4 GRKPDHKNG-HYIIPQMADRSRQKCMSQSLDLSELAKAAKKKLQALSNRLFEELAMDVYD :::::::.: :..::: ::: . :::::::::::::::.:::.::::::::::: mKIAA0 GRKPDHKSGQHFLIPQRADR-------RLLDLSELAKAAKKKLQSLSNHLFEELAMDVYD 280 290 300 310 320 330 220 230 240 250 260 270 mKIAA4 EVDRRENDAVWLATQNHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLII ::::::.:::::::::::::::: ..:::::::::::.::::::::::::::.:::::.: mKIAA0 EVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVI 340 350 360 370 380 390 280 290 300 310 320 mKIAA4 DILSEAKRRQQGKSLSSPTDNLELSARS-------QSELDDQHDYDSVASDEDTDQEPLP ::::.:::::::. :: ::.:: :. .:. .:: :::::::::::: : mKIAA0 DILSDAKRRQQGSPLSRSKDNVELILRTVSTQHSTESQDNDQPDYDSVASDEDTDVE--- 400 410 420 430 440 330 340 350 360 370 380 mKIAA4 SAGATRNNRARSMDSSDLSDGAVTLQ-EYLELKKALATSEAKVQQLMKVNSSLSDELRRL . :.. :: . . ::: : :.. ..: .:: . :: mKIAA0 -TRASKANRQKLQ----------TLQSENSSLRRQATASACQVQ-------TGSD----- 450 460 470 480 390 400 410 420 430 440 mKIAA4 QREIHKLQAENLQLRQPPGPVPPPSLPSERAEHTLMGPGGSTHRRDRQAFSMYEPGSALK :: : . .:.. : : : :: . .:::: ::. : mKIAA0 ----HKDTASHSSLKRRP---------SAR---------GS------RPMSMYETGSGQK 490 500 510 450 460 470 480 490 mKIAA4 PF---G-GTPGDELATRLQPFHSTELEDDAIYSVHVPAGLYRIRKGVSASSVPFTPSSPL :. : .. .: :::::: :. mKIAA0 PYLPMGEASHPEESRTRLQPF----------------------------------PT--- 520 530 500 510 520 530 540 550 mKIAA4 LSCSQEGSRHASKLSRHGSGADSDYENT----QSGDPLLGLEGKRFLELSKEDELHPELE :::.: ...: .:::.:: . : .:.. : . : : :. mKIAA0 ---------HASRLEKQNSTPESDYDNTACDPEPDDTGSTRKGRQRSMLWQGDGLLPDTA 540 550 560 570 580 590 560 570 580 590 600 610 mKIAA4 SLDGDLDPGLPSTEDVILKTEQVTKNIQELLRAAQEFKHDSFVPCSEKIHLAVTEMASLF . .: :::::::: ::::.::::::::::::: ::::..::::.::.::::::.:: mKIAA0 EPHSVPSPTLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERIHVAVTEMAALF 600 610 620 630 640 650 620 630 640 650 660 670 mKIAA4 PKRPALEPVRSSLRLLNASAYRLQSECRKTVPPEPGAPVDFQLLTQQVIQCAYDIAKAAK ::.: . ::.:::::..:::::::::::..: . . :.: ::.:::::::::::::::: mKIAA0 PKKPKSDTVRTSLRLLTSSAYRLQSECRKALPGDSSLPTDVQLVTQQVIQCAYDIAKAAK 660 670 680 690 700 710 680 mKIAA4 QLVTITTREKKQ :::::::.:. mKIAA0 QLVTITTKENSS 720 >>mKIAA1099 ( 981 res) mfj15083 (981 aa) initn: 204 init1: 125 opt: 215 Z-score: 154.0 bits: 39.4 E(): 0.002 Smith-Waterman score: 215; 33.125% identity (35.811% ungapped) in 160 aa overlap (5-159:819-971) 10 20 30 mKIAA4 QVQSGRRKANPQDKVHPIKSEFIRAKYQMLAFVH :: : . :... : ..:::::.. :. mKIAA1 DLDDWPMELIKVMSSIGNELANSVWEEGSQGRTKPS-LDSTREEKERWIRAKYEQKLFLA 790 800 810 820 830 840 40 50 60 70 80 90 mKIAA4 KLPCRDDDGVTAKDLSKQLHSSVRTGNLETCLRLLSLGA--QANFFHPE-KGTTPLHVAA ::: : .:..:: .. .:.: . ::. :. ..: : : : ::.: mKIAA1 PLPC------TEFSLGQQLLRATAEEDLRTVILLLAHGSRDEVNETCGEGDGRTALHLAC 850 860 870 880 890 900 100 110 120 130 140 mKIAA4 KAGQTLQAELLVVYGADPGSPDVNGRTPIDYARQAGHHELAERLVE--CQYELTDRLAFY . :... :.::. ::.: . :..: : . :::::. .: . :.. : : .: mKIAA1 RKGNVVLAQLLIWYGVDVMARDAHGNTALAYARQASSQECIDVLLQYGCPDERFVLMATP 910 920 930 940 950 960 150 160 170 180 190 200 mKIAA4 LCGRKPDHKNGHYIIPQMADRSRQKCMSQSLDLSELAKAAKKKLQALSNRLFEELAMDVY .:: . .:. mKIAA1 NLSRKSNSRNNSSGRAPSVI 970 980 >>mKIAA0167 ( 1029 res) mfj34112 (1029 aa) initn: 134 init1: 134 opt: 203 Z-score: 145.8 bits: 38.0 E(): 0.0056 Smith-Waterman score: 203; 33.099% identity (36.154% ungapped) in 142 aa overlap (6-141:853-988) 10 20 30 mKIAA4 QVQSGRRKANP-QDKVHPIKSEFIRAKYQMLAFVH : .:.: .:. . . .:::::..: :. mKIAA0 LDLDDWPRELTLVLTAIGNDTANRVWESDTRGRAKPTRDSSREERESWIRAKYEQLLFLA 830 840 850 860 870 880 40 50 60 70 80 90 mKIAA4 KLPCRDDDGVTAKDLSKQLHSSVRTGNLETCLRLLS---LGAQANFFHPEKGTTPLHVAA : :.: . :..:: ..:.. .. . : ::. : . . . .:::.:: mKIAA0 PL------GTTEEPLGRQLWAAVEAQDVAAVLLLLAHARHGPLDTSVEDPQLRSPLHLAA 890 900 910 920 930 100 110 120 130 140 mKIAA4 KAGQTLQAELLVVYGADPGSPDVNGRTPIDYARQAGHHELAERLVE--CQYELTDRLAFY . .... ..::. :::: .. :..::: . :::::: . :. :.. : : mKIAA0 ELAHVVITQLLLWYGADVAARDAQGRTALFYARQAGSQLCADILLQHGCPGEGGSTATTP 940 950 960 970 980 990 150 160 170 180 190 200 mKIAA4 LCGRKPDHKNGHYIIPQMADRSRQKCMSQSLDLSELAKAAKKKLQALSNRLFEELAMDVY mKIAA0 SAATTPSITATPSPRRRSSAASLGRVDTTIALV 1000 1010 1020 686 residues in 1 query sequences 1768331 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:59:23 2006 done: Mon Mar 27 10:59:24 2006 Scan time: 0.870 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]