# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mic35030.fasta.nr -Q ../query/mKIAA4043.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4043, 522 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7914042 sequences Expectation_n fit: rho(ln(x))= 5.9718+/-0.000205; mu= 9.3091+/- 0.011 mean_var=122.5458+/-23.560, 0's: 40 Z-trim: 52 B-trim: 620 in 2/65 Lambda= 0.115858 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26341972|dbj|BAC34648.1| unnamed protein produc ( 490) 3495 595.2 1.3e-167 gi|148679835|gb|EDL11782.1| mCG9234 [Mus musculus] ( 598) 2515 431.5 3.1e-118 gi|149259384|ref|XP_001480366.1| PREDICTED: simila ( 758) 2395 411.6 4e-112 gi|149259386|ref|XP_001480368.1| PREDICTED: simila ( 758) 2395 411.6 4e-112 gi|81908907|sp|Q505D9.1|TRI67_MOUSE RecName: Full= ( 768) 2395 411.6 4e-112 gi|149259117|ref|XP_001480481.1| PREDICTED: tripar ( 770) 2395 411.6 4e-112 gi|208973282|ref|NP_001129187.1| tripartite motif- ( 770) 2295 394.9 4.3e-107 gi|149043208|gb|EDL96740.1| similar to TRIM9-like ( 580) 2291 394.1 5.7e-107 gi|114573217|ref|XP_525091.2| PREDICTED: similar t (1378) 2100 362.5 4.2e-97 gi|109020005|ref|XP_001106233.1| PREDICTED: simila ( 758) 2081 359.1 2.5e-96 gi|56203584|emb|CAI19160.1| tripartite motif-conta ( 746) 2079 358.7 3.1e-96 gi|118575127|sp|Q6ZTA4.2|TRI67_HUMAN RecName: Full ( 756) 2079 358.8 3.2e-96 gi|162318756|gb|AAI57056.1| Tripartite motif-conta ( 783) 2079 358.8 3.2e-96 gi|34533403|dbj|BAC86689.1| unnamed protein produc ( 756) 2062 355.9 2.3e-95 gi|194679287|ref|XP_610370.4| PREDICTED: similar t ( 377) 2051 353.8 5e-95 gi|73952602|ref|XP_849994.1| PREDICTED: similar to ( 783) 2031 350.7 8.4e-94 gi|194206135|ref|XP_001915299.1| PREDICTED: tripar ( 783) 2027 350.1 1.3e-93 gi|119590352|gb|EAW69946.1| tripartite motif-conta ( 731) 1646 286.4 1.9e-74 gi|126307043|ref|XP_001369507.1| PREDICTED: simila ( 712) 1511 263.8 1.2e-67 gi|149259121|ref|XP_001480490.1| PREDICTED: tripar ( 698) 1187 209.6 2.3e-51 gi|149259119|ref|XP_001480486.1| PREDICTED: tripar ( 716) 1187 209.6 2.3e-51 gi|109020007|ref|XP_001106170.1| PREDICTED: simila ( 721) 1144 202.4 3.4e-49 gi|33414044|gb|AAP69949.1| TRIM9-like protein TNL ( 721) 1135 200.9 9.7e-49 gi|126307045|ref|XP_001369534.1| PREDICTED: simila ( 660) 1084 192.4 3.3e-46 gi|194174345|gb|EDW87956.1| GE18471 [Drosophila ya ( 309) 441 84.6 4.5e-14 gi|194130423|gb|EDW52466.1| GM18571 [Drosophila se ( 374) 436 83.8 9.1e-14 gi|187038228|emb|CAP22392.1| Hypothetical protein ( 760) 430 83.1 3e-13 gi|198139133|gb|EAL33107.2| GA19383 [Drosophila ps ( 735) 425 82.3 5.2e-13 gi|169404790|gb|ACA53530.1| Hypothetical protein C ( 751) 424 82.1 5.9e-13 gi|14573927|gb|AAC69216.2| Hypothetical protein C3 ( 765) 424 82.1 6e-13 gi|194161653|gb|EDW76554.1| GK14604 [Drosophila wi ( 324) 417 80.6 7.4e-13 gi|194103432|gb|EDW25475.1| GL26615 [Drosophila pe ( 313) 416 80.4 8.2e-13 gi|190616850|gb|EDV32374.1| GF15805 [Drosophila an ( 305) 399 77.5 5.7e-12 gi|28317023|gb|AAO39531.1| RE22018p [Drosophila me ( 729) 395 77.3 1.7e-11 gi|194190995|gb|EDX04571.1| GD23716 [Drosophila si ( 342) 386 75.4 2.8e-11 gi|190661824|gb|EDV59016.1| GG23652 [Drosophila er ( 351) 381 74.6 5.1e-11 gi|193906065|gb|EDW04932.1| GH22533 [Drosophila gr ( 338) 365 71.9 3.2e-10 gi|158595753|gb|EDP34272.1| B-box zinc finger fami ( 296) 354 70.0 1e-09 gi|193904740|gb|EDW03607.1| GH10415 [Drosophila gr ( 319) 349 69.2 1.9e-09 gi|189539094|ref|XP_696374.3| PREDICTED: similar t ( 617) 339 67.8 9.8e-09 gi|156219394|gb|EDO40277.1| predicted protein [Nem ( 655) 326 65.7 4.6e-08 gi|47222455|emb|CAG12975.1| unnamed protein produc ( 650) 316 64.0 1.5e-07 gi|149450003|ref|XP_001520365.1| PREDICTED: simila ( 221) 302 61.2 3.5e-07 gi|148704633|gb|EDL36580.1| tripartite motif prote ( 434) 306 62.2 3.5e-07 gi|149051374|gb|EDM03547.1| tripartite motif prote ( 460) 306 62.2 3.6e-07 gi|148704630|gb|EDL36577.1| tripartite motif prote ( 460) 306 62.2 3.6e-07 gi|148704632|gb|EDL36579.1| tripartite motif prote ( 503) 306 62.2 3.9e-07 gi|30354130|gb|AAH52034.1| Trim9 protein [Mus musc ( 536) 306 62.2 4.1e-07 gi|158937271|ref|NP_001103673.1| tripartite motif ( 547) 306 62.3 4.1e-07 gi|109083567|ref|XP_001102438.1| PREDICTED: tripar ( 550) 306 62.3 4.1e-07 >>gi|26341972|dbj|BAC34648.1| unnamed protein product [M (490 aa) initn: 3495 init1: 3495 opt: 3495 Z-score: 3165.3 bits: 595.2 E(): 1.3e-167 Smith-Waterman score: 3495; 100.000% identity (100.000% similar) in 490 aa overlap (33-522:1-490) 10 20 30 40 50 60 mKIAA4 SADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCLPC :::::::::::::::::::::::::::::: gi|263 MEEELKCPVCGSLFREPIILPCSHNVCLPC 10 20 30 70 80 90 100 110 120 mKIAA4 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 WKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHTHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 WKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHTHT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA4 HTHTHPSFHLPTCSSFHRSMYACIHLSIHWAWVSTHASIQSFVHSFTYVCIHLSIMDLYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HTHTHPSFHLPTCSSFHRSMYACIHLSIHWAWVSTHASIQSFVHSFTYVCIHLSIMDLYE 400 410 420 430 440 450 490 500 510 520 mKIAA4 CMHACIHPYIHTSIQGSQQSLSDQDSVDHVLCTGYQIGRL :::::::::::::::::::::::::::::::::::::::: gi|263 CMHACIHPYIHTSIQGSQQSLSDQDSVDHVLCTGYQIGRL 460 470 480 490 >>gi|148679835|gb|EDL11782.1| mCG9234 [Mus musculus] (598 aa) initn: 2637 init1: 2509 opt: 2515 Z-score: 2279.0 bits: 431.5 E(): 3.1e-118 Smith-Waterman score: 2515; 98.889% identity (99.167% similar) in 360 aa overlap (13-372:1-360) 10 20 30 40 50 60 mKIAA4 LKSADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCL :::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCL 10 20 30 40 70 80 90 100 110 120 mKIAA4 PCARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PCARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGAT 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 GGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 SSSITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSSITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDR 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 TPPEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TPPEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTAS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 SAGGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SAGGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLG 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 ATWKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHT :::::::. : gi|148 ATWKQHKLEKCCTRNNSVTLAWRTPPFTHSPAEGYILELDDGDGGQFREVYVGKETLCTI 350 360 370 380 390 400 >>gi|149259384|ref|XP_001480366.1| PREDICTED: similar to (758 aa) initn: 2515 init1: 2387 opt: 2395 Z-score: 2169.3 bits: 411.6 E(): 4e-112 Smith-Waterman score: 2395; 94.460% identity (97.230% similar) in 361 aa overlap (33-393:1-360) 10 20 30 40 50 60 mKIAA4 SADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCLPC :::::::::::::::::::::::::::::: gi|149 MEEELKCPVCGSLFREPIILPCSHNVCLPC 10 20 30 70 80 90 100 110 120 mKIAA4 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 WKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHTHT :::::.... : . : ... . ::: :. gi|149 WKQHKAQLSQALNGVSDKAKEA-KEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALT 340 350 360 370 380 430 440 450 460 470 480 mKIAA4 HTHTHPSFHLPTCSSFHRSMYACIHLSIHWAWVSTHASIQSFVHSFTYVCIHLSIMDLYE gi|149 RQKAKLLTKVTKEREHKLKFIWCFGHAKLSTSPTELHPHLRKHYLRVSHFKEKRSYVGKE 390 400 410 420 430 440 >>gi|149259386|ref|XP_001480368.1| PREDICTED: similar to (758 aa) initn: 2515 init1: 2387 opt: 2395 Z-score: 2169.3 bits: 411.6 E(): 4e-112 Smith-Waterman score: 2395; 94.460% identity (97.230% similar) in 361 aa overlap (33-393:1-360) 10 20 30 40 50 60 mKIAA4 SADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCLPC :::::::::::::::::::::::::::::: gi|149 MEEELKCPVCGSLFREPIILPCSHNVCLPC 10 20 30 70 80 90 100 110 120 mKIAA4 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 WKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHTHT :::::.... : . : ... . ::: :. gi|149 WKQHKAQLSQALNGVSDKAKEA-KEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALT 340 350 360 370 380 430 440 450 460 470 480 mKIAA4 HTHTHPSFHLPTCSSFHRSMYACIHLSIHWAWVSTHASIQSFVHSFTYVCIHLSIMDLYE gi|149 RQKAKLLTKVTKEREHKLKFIWCFGHAKLSTSPTELHPHLRKHYLRVSHFKEKRSYVGKE 390 400 410 420 430 440 >>gi|81908907|sp|Q505D9.1|TRI67_MOUSE RecName: Full=Trip (768 aa) initn: 2387 init1: 2387 opt: 2395 Z-score: 2169.2 bits: 411.6 E(): 4e-112 Smith-Waterman score: 2395; 94.460% identity (97.230% similar) in 361 aa overlap (33-393:1-360) 10 20 30 40 50 60 mKIAA4 SADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCLPC :::::::::::::::::::::::::::::: gi|819 MEEELKCPVCGSLFREPIILPCSHNVCLPC 10 20 30 70 80 90 100 110 120 mKIAA4 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 WKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHTHT :::::.... : . : ... . ::: :. gi|819 WKQHKAQLSQALNGVSDKAKEA-KEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALT 340 350 360 370 380 430 440 450 460 470 480 mKIAA4 HTHTHPSFHLPTCSSFHRSMYACIHLSIHWAWVSTHASIQSFVHSFTYVCIHLSIMDLYE gi|819 RQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKEDDPSGFLQISDA 390 400 410 420 430 440 >>gi|149259117|ref|XP_001480481.1| PREDICTED: tripartite (770 aa) initn: 2387 init1: 2387 opt: 2395 Z-score: 2169.2 bits: 411.6 E(): 4e-112 Smith-Waterman score: 2395; 94.460% identity (97.230% similar) in 361 aa overlap (33-393:1-360) 10 20 30 40 50 60 mKIAA4 SADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCLPC :::::::::::::::::::::::::::::: gi|149 MEEELKCPVCGSLFREPIILPCSHNVCLPC 10 20 30 70 80 90 100 110 120 mKIAA4 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQDAAAGATSGGAGANTAGGLGGGATGG 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGAT 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 WKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHTHT :::::.... : . : ... . ::: :. gi|149 WKQHKAQLSQALNGVSDKAKEA-KEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALT 340 350 360 370 380 430 440 450 460 470 480 mKIAA4 HTHTHPSFHLPTCSSFHRSMYACIHLSIHWAWVSTHASIQSFVHSFTYVCIHLSIMDLYE gi|149 RQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKEDDPSGFLQISDA 390 400 410 420 430 440 >>gi|208973282|ref|NP_001129187.1| tripartite motif-cont (770 aa) initn: 1905 init1: 1905 opt: 2295 Z-score: 2078.9 bits: 394.9 E(): 4.3e-107 Smith-Waterman score: 2295; 90.083% identity (95.317% similar) in 363 aa overlap (33-393:1-362) 10 20 30 40 50 60 mKIAA4 SADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCLPC :::::::::::::::::::::::::::::: gi|208 MEEELKCPVCGSLFREPIILPCSHNVCLPC 10 20 30 70 80 90 100 110 120 mKIAA4 ARTIAVQTPDGEQHLPPPLLLSRGAAAAAT--PPDQDAAAGATSGGAGANTAGGLGGGAT :::::::::::::::::::::::::::::. ::::::::::: :::::.:::::::::. gi|208 ARTIAVQTPDGEQHLPPPLLLSRGAAAAAAAPPPDQDAAAGATCGGAGASTAGGLGGGAA 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 GGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 GGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 SSSITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDR ::::::::::::::::::::::::::::::::::::::::::. ::.::::::::::::: gi|208 SSSITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVAAGASAAPAVAICQLCDR 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TPPEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTAS ::::::::::::::::::::::::::::::::::::::::::::.::::: : .:::::: gi|208 TPPEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPAPPEATSASVGTSTAS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 SAGGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLG ::::::::::::: .::::::::::::::::::::::::::::::::::::.:::::::: gi|208 SAGGCRSPGGAGAPVPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHGKHEVKPLG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 ATWKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHT :::::::.... : . : ... . ::: :. gi|208 ATWKQHKAQLSQALNGVSDKAKEA-KEFLVQLKNILQQIQENGLDYEACLVAQCDALVDA 340 350 360 370 380 430 440 450 460 470 480 mKIAA4 HTHTHTHPSFHLPTCSSFHRSMYACIHLSIHWAWVSTHASIQSFVHSFTYVCIHLSIMDL gi|208 LTRQKAKLLTKVTKEREQKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKEDDPSGFLQIS 390 400 410 420 430 440 >>gi|149043208|gb|EDL96740.1| similar to TRIM9-like prot (580 aa) initn: 2414 init1: 1903 opt: 2291 Z-score: 2076.8 bits: 394.1 E(): 5.7e-107 Smith-Waterman score: 2291; 94.152% identity (97.076% similar) in 342 aa overlap (33-372:1-342) 10 20 30 40 50 60 mKIAA4 SADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCLPC :::::::::::::::::::::::::::::: gi|149 MEEELKCPVCGSLFREPIILPCSHNVCLPC 10 20 30 70 80 90 100 110 120 mKIAA4 ARTIAVQTPDGEQHLPPPLLLSRGAAAAAT--PPDQDAAAGATSGGAGANTAGGLGGGAT :::::::::::::::::::::::::::::. ::::::::::: :::::.:::::::::. gi|149 ARTIAVQTPDGEQHLPPPLLLSRGAAAAAAAPPPDQDAAAGATCGGAGASTAGGLGGGAA 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 GGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 SSSITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDR ::::::::::::::::::::::::::::::::::::::::::. ::.::::::::::::: gi|149 SSSITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVAAGASAAPAVAICQLCDR 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TPPEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTAS ::::::::::::::::::::::::::::::::::::::::::::.::::: : .:::::: gi|149 TPPEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPAPPEATSASVGTSTAS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 SAGGCRSPGGAGASAPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLG ::::::::::::: .::::::::::::::::::::::::::::::::::::.:::::::: gi|149 SAGGCRSPGGAGAPVPRKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHGKHEVKPLG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA4 ATWKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHT :::::::. : gi|149 ATWKQHKLEKCCTRNNSATLAWRTPPFTHSPADGYILELDDGDGGQFREVYVGKETLCTI 340 350 360 370 380 390 >>gi|114573217|ref|XP_525091.2| PREDICTED: similar to Tr (1378 aa) initn: 2070 init1: 1239 opt: 2100 Z-score: 1899.6 bits: 362.5 E(): 4.2e-97 Smith-Waterman score: 2100; 76.847% identity (87.192% similar) in 406 aa overlap (1-393:564-968) 10 20 30 mKIAA4 LKSADIASPAALVFGALTILGWSRAALAAG : .: :.: : : .: :: ::: gi|114 WPQGGGYRTERGACPSAVKWACPCDAPARRLTGAHRAGPPPPVSRAPAIHPQHRAERAAG 540 550 560 570 580 590 40 50 60 70 80 mKIAA4 AAMEEELKCPVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQHLPPPLLLSRGA--- :::::::::::::::::::::::::::::::::::::::::::::::: :::::::. gi|114 AAMEEELKCPVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQHLPQPLLLSRGSGLQ 600 610 620 630 640 650 90 100 110 120 130 140 mKIAA4 --AAAATPPDQDAAAGATSGGAGANTAGGLGGGATGGGDHADKLSLYSETDSGYGSYTPS ::::. ..::::: . .:::...:::.:::: ::::::::::::::::::::::::: gi|114 AGAAAAASLEHDAAAGPACSGAGGSAAGGIGGGAGGGGDHADKLSLYSETDSGYGSYTPS 660 670 680 690 700 710 150 160 170 180 190 200 mKIAA4 LKSPNGVRVLPMVPAPPGSSAAAARGAACSSLCSSSSSITCPQCHRSASLDHRGLRGFQR :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|114 LKSPNGVRVLPMVPAPPGSSAAAARGAACSSLSSSSSSITCPQCHRSASLDHRGLRGFQR 720 730 740 750 760 770 210 220 230 240 250 260 mKIAA4 NRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTPPEPAATLCEQCDVLYCATCQLKC :::::.::::::::::.:::..:: ::::::::::::::::::::::::::::..::::: gi|114 NRLLEAIVQRYQQGRGAVPGTSAAAAVAICQLCDRTPPEPAATLCEQCDVLYCSACQLKC 780 790 800 810 820 830 270 280 290 300 310 mKIAA4 HPSRGPFAKHRLVQPPPPP-TPPEATPAVTGTSTA--SSAGGCRSPGGAGASAP-----R ::::::::::::::::::: .: ::. . ::.. . :..:::.:::::::.: : gi|114 HPSRGPFAKHRLVQPPPPPPAPAEAASGPTGAAQGAPSGGGGCKSPGGAGAGATGGSTAR 840 850 860 870 880 890 320 330 340 350 360 370 mKIAA4 KFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGRHSKHEVKPLGATWKQHKVSVGCAERQP :::::::::::::::::::::.::::.:::::::.::::::::: :::::.... : gi|114 KFPTCPEHEMENYSMYCVSCRTPVCYLCLEEGRHAKHEVKPLGAMWKQHKAQLSQALNGV 900 910 920 930 940 950 380 390 400 410 420 430 mKIAA4 GWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPIHSSVRPSTHTHTHTHTHPSFHLPTCSS . : ... . ::: :. gi|114 SDKAKEA-KEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKERE 960 970 980 990 1000 1010 >>gi|109020005|ref|XP_001106233.1| PREDICTED: similar to (758 aa) initn: 1294 init1: 1294 opt: 2081 Z-score: 1885.7 bits: 359.1 E(): 2.5e-96 Smith-Waterman score: 2081; 80.965% identity (90.349% similar) in 373 aa overlap (33-393:1-372) 10 20 30 40 50 60 mKIAA4 SADIASPAALVFGALTILGWSRAALAAGAAMEEELKCPVCGSLFREPIILPCSHNVCLPC :::::::::::::::::::::::::::::: gi|109 MEEELKCPVCGSLFREPIILPCSHNVCLPC 10 20 30 70 80 90 100 110 mKIAA4 ARTIAVQTPDGEQHLPPPLLLSRG----AAAAATPP-DQDAAAGATSGGAGANTAGGLGG :::::::::::::::: ::::::: :.::::: ..::::: . .:::...:::::: gi|109 ARTIAVQTPDGEQHLPQPLLLSRGSGLQAGAAATPTLEHDAAAGPACSGAGGSAAGGLGG 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA4 GATGGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSL :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GAGGGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSL 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA4 CSSSSSITCPQCHRSASLDHRGLRGFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQL ::::::::::::::::::::::::::::::::.::::::::::.::::.:: ::::::: gi|109 SSSSSSITCPQCHRSASLDHRGLRGFQRNRLLEAIVQRYQQGRGAVPGASAAAAVAICQL 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA4 CDRTPPEPAATLCEQCDVLYCATCQLKCHPSRGPFAKHRLVQPPPPPTPPEATPAVTGTS ::::::::::::::::::::::.::::::::::::::::::::::::.: ::. . ::.. gi|109 CDRTPPEPAATLCEQCDVLYCAACQLKCHPSRGPFAKHRLVQPPPPPAPAEAASGPTGAA 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA4 TASSAGG--CRSPGGAGASAP-----RKFPTCPEHEMENYSMYCVSCRSPVCYMCLEEGR .. .:: :.:::::::.: ::::::::::::::::::::::.::::.:::::: gi|109 QGAPSGGSGCKSPGGAGAGATGGSTARKFPTCPEHEMENYSMYCVSCRTPVCYLCLEEGR 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA4 HSKHEVKPLGATWKQHKVSVGCAERQPGWKKRDSLNPFLVGLRAKQESLHPSIHPSIHPI :.::::::::: :::::.... : . : ... . ::: :. gi|109 HAKHEVKPLGAMWKQHKAQLSQALNGVSDKAKEA-KEFLVQLKNILQQIQENGLDYEACL 340 350 360 370 380 420 430 440 450 460 470 mKIAA4 HSSVRPSTHTHTHTHTHPSFHLPTCSSFHRSMYACIHLSIHWAWVSTHASIQSFVHSFTY gi|109 VAQCDALVDALTRQKAKLLTKVTKEREHKLKVVWDQINHCTLKLRQSTGLMEYCLEVIKE 390 400 410 420 430 440 522 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 05:26:42 2009 done: Tue Mar 17 05:33:56 2009 Total Scan time: 970.200 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]