Comparison of KIAA cDNA sequences between mouse and human (FLJ00288)
<<Original sequence data>>
mouse mFLJ00288 (mic33003) length: 4356 bp, CDS: 1120 - 2109
human (sh02579) length: 5561 bp, CDS: 3954 - 4607
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 14 - 4120 1453 1447 49.9
CDS: 4121 - 2912 0 0 0.0
3'UTR: 2913 - 5754 1065 1184 52.6
amino acid
CDS: 4121 - 2912 0 0 0.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mic33003 1 GTCGGCGGAGGCCGGGCGGCTCAGGCGGCTGAGGTGGCCGCTGGCGCTCT 50
|| | ||| | ||
sh02579 1 .............CGGGGTTTCACCATGTTG................... 18
51 ----+----*----+----*----+----*----+----*----+----* 100
mic33003 51 GGTGGCGGGCGCGGCCGATATGGCGAAAAGCAGCAGAGAGAATGGGCCGC 100
| | ||| | | | | | || ||| ||
sh02579 19 ...GCCAGGCTGGTCTCAAACTCCTGAACTCAGGTGA............. 52
101 ----+----*----+----*----+----*----+----*----+----* 150
mic33003 101 GCGAGCCCGCAGCAGGCGGGAGCCTGTCTGGGACCCGGGAAAGCCTGGCC 150
| | || |||| | | | |||| | |
sh02579 53 ........TCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGT 94
151 ----+----*----+----*----+----*----+----*----+----* 200
mic33003 151 CAGGGCCCCGACGCCGCCACCGCCGACGAGCTGAGCTCGCTCGGCTCCGA 200
|| || | | || | | | | || || ||||
sh02579 95 GAGCCACCTTGCCCGGCGAAAGTCCTCTTTTCTCCCTGTTTCTGCTC... 141
201 ----+----*----+----*----+----*----+----*----+----* 250
mic33003 201 CTCGGAGGCCAACGGCTTCGCCGAGCGCCGCATCGACAAGTTCGGATTCA 250
||
sh02579 142 ..............................................TTGC 145
251 ----+----*----+----*----+----*----+----*----+----* 300
mic33003 251 TCGTGGGTTCGCAGGGCGCCGAGGGCGCACTGGAGGAAGTTCCCCTGGAG 300
| || || | | | | ||| | |||| ||| || | ||
sh02579 146 TGCTGTGTGCACTGAGGGCCCACCACGCATTGGCAGAGG.......GGCT 188
301 ----+----*----+----*----+----*----+----*----+----* 350
mic33003 301 GTGCTGAGGCAGAGGGAGTCCAAGTGGCTGGACATGCTCAACAACTGGGA 350
| ||| || || | | ||||||| | ||||| | |
sh02579 189 GGGCTAGGGGAG...CTGCCTGGGTGGCTGCATGGGCTCAGC.....TGT 230
351 ----+----*----+----*----+----*----+----*----+----* 400
mic33003 351 CAAATGGATGGCCAAGAAGCACAAAAAGATTCGTCTTCGATGCCAGAAGG 400
| | ||| || ||||||||| || ||||| ||||
sh02579 231 CCTTTTGATTTTCA.............GATTCGTCTGCGGTGCCAAAAGG 267
401 ----+----*----+----*----+----*----+----*----+----* 450
mic33003 401 GCATCCCACCTTCTCTGCGCGGACGGGCTTGGCAGTACCTGTCGGGAGGC 450
||||||| ||||||||||| || || ||||||||||||||||| ||||||
sh02579 268 GCATCCCGCCTTCTCTGCGGGGCCGTGCTTGGCAGTACCTGTCAGGAGGC 317
451 ----+----*----+----*----+----*----+----*----+----* 500
mic33003 451 AAGGTGAAACTTCAGCAGAACCCTGGGAAGTTTGATGAGCTGGACATGTC 500
|||||||| | |||||||||||||| |||||||| | | ||
sh02579 318 AAGGTGAAGTTACAGCAGAACCCTGGAAAGTTTGACGTAAGTTTCCCTTC 367
501 ----+----*----+----*----+----*----+----*----+----* 550
mic33003 501 TCCTGGGGACCCCAAGTGGCTAGATGTGATTGAGCGTGACCTGCACCGGC 550
|| ||| | || | | | | || ||||
sh02579 368 CTTTGCCCTGCCCTCCCTTCCGCATCTCTTGGCGTCCTCCCCATGGCGGC 417
551 ----+----*----+----*----+----*----+----*----+----* 600
mic33003 551 AGTTC...............................CCATTCCATGAGAT 569
| | | || ||||||| |
sh02579 418 AATCCTCCATGTGCTCACCTGAACCTCACAGGATGAGCAGTCCATGAAAC 467
601 ----+----*----+----*----+----*----+----*----+----* 650
mic33003 570 GT....TCGTGTCCCGAGGAGGCCATGGGTAAGCAGGC............ 603
| || ||| || | | ||| | |||||||
sh02579 468 CTCCAGTCATGTGCCCAACTGCCCAGGCCCCAGCAGGCCAGACCGGCCCA 517
651 ----+----*----+----*----+----*----+----*----+----* 700
mic33003 604 ........TAAGTATGTGGGCTAGAAGGTGGCGCTA.............. 631
|| | ||| || || ||| |
sh02579 518 GTCCTGGGTACCTGTGTCTCCTGGAGGGTCTGTACAACTGAGGCTCCAGC 567
701 ----+----*----+----*----+----*----+----*----+----* 750
mic33003 632 ...............................................AGC 634
|||
sh02579 568 CCTGAGCAGCCCTCAGTGGAATGGCCAGATTTGGTACCCCCTATTCCAGC 617
751 ----+----*----+----*----+----*----+----*----+----* 800
mic33003 635 TGTCTCTTCGACTGTCAGGAAAGGTACAGTGAGCTTGGCCGCATGGGTGT 684
| | ||| || | |||| | | ||| | || | |
sh02579 618 TCTTTCTCTTGATGACCACTCAGGTTTTGCTTTCCTGGGCTCAGTAGGCT 667
801 ----+----*----+----*----+----*----+----*----+----* 850
mic33003 685 GAAACTCTACTGTTG................................... 699
| || || |||
sh02579 668 ACCTCCCTGCTCTTGGTCATCAGGAGGGGACACTCAGACCATTTCCCTGA 717
851 ----+----*----+----*----+----*----+----*----+----* 900
mic33003 700 ................CCCTTTACCTTCTGTGGGCTGGCAGTGTACTGAC 733
|| | | | || ||||| | | | |
sh02579 718 CTGCCTTGGGCCCTGTGCCCTGGGCCTATGGGGGCTTGACTAGCAGGACC 767
901 ----+----*----+----*----+----*----+----*----+----* 950
mic33003 734 CCA....CTTTTGACTCTTGCGGCTGCTTGCGTGATTTACTCTCCGGGCT 779
|| ||| | ||| |||| | | ||||| | ||
sh02579 768 ACAGGTCCTTCAGTGTCTCCCGGCCTCCCATCCTCTACTTTCTCCTGCCT 817
951 ----+----*----+----*----+----*----+----*----+----* 1000
mic33003 780 GTTAGAA..CTTTCCTGGTCAGGCCCTCTTGATGT....AGGGGAAGGGA 823
| || || || | ||| || || ||| |||| |
sh02579 818 TGTCCAAGCCTGGCCAGCACAGCCCACCTGTGTGTCTTGTGGGGTCATCA 867
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mic33003 824 TAAGTGAGGTTGGTGGACAGAGTCAGGAGGGGGGTGA..TGTATTGGGCA 871
| | | | || | | |||||| ||| | | || ||
sh02579 868 GCCCTAGGAGTAGCAGAGCCAAACCCAAGGGGGCTGAAGGGAACTGCCCA 917
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mic33003 872 AGGA...................CAGAAGTATCCAGCAGGGTGGCCCTCT 902
|| | ||| |||| || |||||||
sh02579 918 AGTAGCTCAAGGGGTCAGACGCCAGTCAGTGGCCAGAGAGGGTGCCCTCT 967
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mic33003 903 CTAGCCCTTCCTCAGTCTGTCTCTA......................... 927
| | | |||| ||||| | |
sh02579 968 GTTGTTATCCCTCCTCCTGTCCCGATATCCCTCCTGCTGCTCCCTGCCCC 1017
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mic33003 928 ................................................TC 929
||
sh02579 1018 ATGGCTGGCCAGAGTAAAATACCTCTCCATTCAGAGCTGGGCAGCTCCTC 1067
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mic33003 930 CGGCATCCAGCCCTAGTCCAATCCTTGCTTTCTGTTTGAAT.CCTGTCAT 978
| || | | ||| || | | | | ||| || | |||| |
sh02579 1068 CAGCCTGCTCCCCCAGGGAACTATGGGGAAGCAGTTGGATTCCCTGGGGT 1117
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mic33003 979 TGGGTCGGTCACAGGTCGGAGGGTGACTACAAGCACATCCTTTTCCGGGA 1028
|| ||| | || | || ||| |||| | |
sh02579 1118 TGCCCCGGCTTACCTGCCAGATCTGGCCGCAGGCATCGGGGTTTCTCGCA 1167
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mic33003 1029 AGGGC.AGGGCAGGTTCTGAGGCAAGCCTGTAGACATGGAGTACAGGGAG 1077
| | ||| | | ||||| | ||||| | | |
sh02579 1168 GGCCCTTGGGACTGGTGACAGGCAGACAGTGAGACAGAGCAGAGCTGCCT 1217
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mic33003 1078 GTGATGGGCAGTAGTCAGCTCTTGCCTTCCTATCCTGCTTGACCTCTTCA 1127
| || | | | | || | |||| | || ||
sh02579 1218 ACCACCAGCTCTTTGTTGACATATCTCATGCTTCTTCATTGAACACTCCA 1267
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mic33003 1128 TAGCCAGCAGGACCTGTTCCGTGTGCTGAAGGCCTACACGCTG....... 1170
| || ||||||||| || | ||| | | || |
sh02579 1268 .GTCTTGCCAAACCTGTTCCTTGAGATGACTGGGCAGGAGCAGGGCAAGG 1316
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mic33003 1171 .................TACCGCCCTGAGGAGGGCTACTGCCAGGCGCAG 1203
| | |||| |||||| | ||| || |
sh02579 1317 TAGCCTAGAGTTTCTGCTGTTGACCTGGAGAGGGCGAGAGCCTTTTGCTG 1366
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mic33003 1204 GCACCCATTGCTGCTG.................................. 1219
||| | || ||
sh02579 1367 GCAACACGTGGACTTGCAGGGGCAGGGAAGCTGGTAGAGTGTCTGGCTGG 1416
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mic33003 1220 .................................................. 1220
sh02579 1417 GGTAGGTCTGAATCTGGCTGATTGGATTATTCCCCAGAGCACCAATACCA 1466
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mic33003 1220 ......TGCTCCTCATGCACATGCCTGCTGAGCAAGCCTTCTGGTGTCTG 1263
|| | | || || | ||| ||| || ||| ||
sh02579 1467 GGCCACACTGGAGCAGCCTCTTGACTCCAGAGTCTTCCTCCTAGTGGCTA 1516
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mic33003 1264 GTACAAGTCTGTGAGAAGTACCTGCCTGGCTACTACAGTGAGAAACTGGA 1313
| || | || | || | | |||| || ||
sh02579 1517 CATCTCTTCCATTTCGAGGGGCCGCATCCTGGGCAAAGTGGGAGGCTCAG 1566
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mic33003 1314 GGCAATCCAGCTGGACGGCGAGATCCTCTTCTCACTGCTACAGAAGGTGT 1363
| | ||| | ||| || | | |||
sh02579 1567 G........GGTGGGAACCTCAGTCCAAGTCCATAGTTAAAATCAGGCTG 1608
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mic33003 1364 CCCCTGTGGCTCACAAGCACCTCAGCCGCCAGAAGATTGATCCCCTGCTG 1413
|| | || || || || | || || || | ||
sh02579 1609 CCAGAGCCAGGCATGAGAGCCAAGAGCGTGGGCAGCCTGGTCAGCCTCT. 1657
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mic33003 1414 TACATGACAGAGTGGTT...CATGTGTGCTTTTGCCCGCACGCTGCCCTG 1460
|| | | |||||| || | || | || ||| |
sh02579 1658 ....TGGCTGTGTGGTTCAGCAAGCATGAGTGTGTGTGCAGCAGAACACA 1703
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mic33003 1461 GAGCTCTGTGCTGCGAGTTTGGGACATGTTCTTTTGTGAAGGAGTCAAGA 1510
||||| ||||| | || ||| ||| | || || |
sh02579 1704 GAGCTGTGTGCATGTGTGTGTAGAGCTGTGCTTCCAGAGAAGAATC...A 1750
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mic33003 1511 TCATCTTCCGCGTGGGGCTGGTA..CTACTGAAGCATGCACTGGGCTCCC 1558
| | || | ||| |||| | | || | | | || |
sh02579 1751 GCCACCCCCCAGGGGGTCTGGAAAGTTGCTTGTGTGAGGAGGTGGATTTG 1800
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mic33003 1559 CAGAGAAG..................................CTCAAAGC 1574
|||||||| | |
sh02579 1801 CAGAGAAGGCCTTCTTGATGCACCGAAGCTGAGTGACGGGTTCCTGCATG 1850
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mic33003 1575 CTGCCAGGGCCAGTATGAAACCATCGAG....CAGCTGCGGAGCCTCAGC 1620
| | ||| | | | ||| | | | || ||| || || ||
sh02579 1851 GTTCTGGGGGCTGGAAGAATGGTTTGTGAGCACACCTGGAAAGACTTTGC 1900
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mic33003 1621 CCCAAGATCATGC..AGGAAGCCT.TCCTGGTTCAGGAGGTGATAGAGCT 1667
| | | | | ||||||| | | ||| ||| | |
sh02579 1901 CTGTGGGTGACCCAGAGGAAGCATGAGGAGCTTCCCCTGGTTGCTGCGGG 1950
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mic33003 1668 GCCTGTGACGGAGCGCCAGATTGAGCGGG..................... 1696
|||||| || || | | | |||
sh02579 1951 TCCTGTGCCGAGGCAGGGCACAGTGGGGGTCTGGTGATGGCAGCATGCAC 2000
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mic33003 1697 .................................................. 1697
sh02579 2001 CTGTTTCTGTGCTCTCTCCCCACAGGGCCCTCCATTCAATACCCAGTCCA 2050
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mic33003 1697 ..............AGCACCTCATCCAGCTGCGGCGCT............ 1720
| | | ||| ||| ||| ||
sh02579 2051 GGTGGCCCATCCCAACCTCAGCATTCAGGGCAGGCTCTGCAGGTGCTGGT 2100
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mic33003 1721 .........................................GGCAAGAGA 1729
|||| |
sh02579 2101 GGCTCCTTCTCCTGCACGTGCTATTTCTTCCTCCTTCCTTGGGCAGGCAG 2150
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mic33003 1730 CGCGTGGTGAGCTGGAGTGCC..GCTCTCTGCCCAGGATGCATGGTGCCA 1777
| | || || | || ||| ||| | | || | || | |
sh02579 2151 GACCTCCTGTCCTTTTTTACCTGGCTTTCTTCTCTGGCTTCACCTTATGA 2200
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mic33003 1778 AAGC............CATCCTGGATGCAGAGCCTGGTCCCAGGCCTGCC 1815
|| || |||| | | | || |||| | |
sh02579 2201 TGGCACCAGTACCCCTCAGGCTGGTGGAGGCTACAGGCCCCATGACCATG 2250
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mic33003 1816 CTGCAACCTTCACCTTCCATCCGCCTACCGCCAGATGCAGCCCTCCTCAG 1865
| | ||| | | | | | | | | | || ||||| |
sh02579 2251 GTACCTGCTTGTCTGCCGGTGCCCTTTCGATCTGCAGCTACCCTCTTTTC 2300
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mic33003 1866 CTCCAAGGCTAAGCCGCACAAGC..AGGCCCAGAAGGAGCAGAAG...CG 1910
|| | || | || || || | | || |||| |
sh02579 2301 CTTTCTCACCAACCATGTGTGGCCAAGTGCCTTAGGCTGCTGAAGTGCCA 2350
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mic33003 1911 GACAAAGACCAGTGCGCAACTG............................ 1932
|| || || | |||||
sh02579 2351 GATGAACACATCCTAGGAACTGACTTCCGGGGTTTTCGGGTTCCTACCTC 2400
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mic33003 1933 .................................................. 1933
sh02579 2401 ATGGGAACTGCTAGGAGAATTTGTGGGGCCCTCTTCCCCATTCTGACAAA 2450
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mic33003 1933 ..............................GACAAGTCCCCAGGCCTCAG 1952
| | || | ||| | |||
sh02579 2451 AGCAAACCTGCACTGCGCTCAGACAGTACTTAGAGGTGCACAGTACACAG 2500
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mic33003 1953 TCAAGC..CACAGTGGTGACTGCTGCAGGAGATGCATG............ 1988
| | |||| |||| || || ||| ||| |
sh02579 2501 ACCCCCATCACAAGGGTGTGTGGGGCCCCAGAGGCACGCATCCACCGCTC 2550
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mic33003 1989 ........TCCTCCTCAGGGTGTGTCCCCAAAGGACCCGGTCC..CCCAG 2028
||| ||| || | | ||| ||| | || ||| |
sh02579 2551 CGCTATGTGCCTGCTCTAGGGCTCTGTGTGGAGGCCCCAGCCCCTCCCTG 2600
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mic33003 2029 GACCCTACTCCTCAGAACTTAGCCTGCCACCATTCCCAGGAGAGCCTGAC 2078
|||| | | | |||| | ||| || | || ||| ||
sh02579 2601 TCCCCTCCAGCCCTGAAC..ACTCTGTCAGCCGCTCCTCTCAGTCCTTAC 2648
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mic33003 2079 CTCCCAGGAGAG...................................... 2090
| | || ||
sh02579 2649 CCTCTAGTCAAGTTCCTGGCACCCTAGGTTCTTGAGCTTAATGCTAGGAC 2698
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mic33003 2091 .....................................TGAGGACACCTAC 2103
||| | ||||| |
sh02579 2699 ACTCCCACTGAGGGCCAGAGAGGGAAAGGGGCTTGTATGAAGTCACCTGC 2748
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mic33003 2104 TTGT......AACCCCGGGAGCTCAGGCCTCCGCGGGGGTCTTCTCACGT 2147
| || | || | || | || | | | || | || | |
sh02579 2749 TCGTCAGGGCAGGGCCTGTGTCTGCGCCCACTGGGTATGTTTGCTGAGGA 2798
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mic33003 2148 CTTACACGGTTCAAAGACTGACAACACTCCAGGTCCTCTGCGCCTGAGG. 2196
| | | || | | | || | | | | |||| |
sh02579 2799 CCTGGCCTCCCTCCTGAGGGCCTTCCCTGATGCTGCCCCTGCCCTGCAGG 2848
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mic33003 2197 ..........................AGCCAACTGCTTGGCCCGTGGGCT 2220
| | ||| ||| || |
sh02579 2849 CAACTTGTACTTAAACCAACACTCCCATGAAGGTGCCTGGGCCACACCTT 2898
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mic33003 2221 GGGATAGGATCTGGCTGGTCCAGTACAGAGTCTGC............... 2255
| ||||| | || || | | |||||
sh02579 2899 TCAGCACATTCTGGTTCCTCTGGTGAATACTCTGCTTCCCTGCTCAGCCC 2948
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mic33003 2256 .CTGGG...CCTCCTTATTTATTTTCTC...............TTGAGTT 2286
||||| |||||||||||||||| || ||||| |
sh02579 2949 TCTGGGCTTCCTCCTTATTTATTTTTTCTTTCTTTTTTAAAAATTGAGGT 2998
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mic33003 2287 GAGCTGGTCCAGCCAGCACAGGCAGAAGCTGTGGCCAAAGGGGTTGGGTC 2336
| | || ||| | | || | | | || | | ||
sh02579 2999 ATGAATTTACATACAGTAAAATGCATAGATCTTG..AATGTGCATGCAGT 3046
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mic33003 2337 TCAG..................CCCCATCCTTCTGGGGAGATGTTACCCA 2368
|||| | ||||| | | | |
sh02579 3047 TCAGTGAGTTTTGATAAATAATACACATCCATGTAACCAACATGCAGATC 3096
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mic33003 2369 GGGGTAGGGTGCTGGCATGCGGGGAGGCGGTGGGGTACTCTTTGTGTAAA 2418
||||| | | | | | |||| ||||
sh02579 3097 AAGGTAGAGAACATTTCAAATGACCAAGAAAAGATTTTCCTTTTTGTA.. 3144
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mic33003 2419 ATAGATATATGGTTTTGTACGGAAATAAACAGGCTTGTGTATAGAGCTGT 2468
|| | | | | |||||||| | | | | | || | || ||
sh02579 3145 ATGGCTTTGTTGTTTTGTAAAGGTGCACATACTGAAGCGTTCACAGAAGT 3194
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mic33003 2469 GTATAGTTAGGACCCAAAGGGCTATCGCCCTTCATCCCGGGAGCCCCCCT 2518
| || | || ||| | || | || | |||
sh02579 3195 TCAAAGAAAAGAGTAAAA.......CTTTGTTGAAACCTCGGCACCCAGA 3237
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mic33003 2519 GAAACATACAGGAGCACGGAGTCCAGAG.............CCAATTACT 2555
||| || | | | | | || ||| |
sh02579 3238 GAAGTATCTGAGGTTAATGGTTTGACAGATGTCATGTCCTTCCAGAAAGA 3287
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mic33003 2556 GTTCTTGGCTCTTCTCTCTCGACCCATCTTTCTTCCATGTT......CAC 2599
| ||| || |||| | | || ||| | || | |||
sh02579 3288 GCTCTGTGCAGATCTCACACACACCTGGCTTCCTGGATAGTTGACGCCAC 3337
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mic33003 2600 CTCTACACAGAAGAGT.................................. 2615
|| ||| || | |
sh02579 3338 CTGCACAGGGAGGCATGTAGCTGAGGAGCTGGGATGGACGGCTTTGAGTC 3387
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mic33003 2616 ............CAGTCCAGGCTAAAGCCCACCACTGGGCAGAACAGGAA 2653
|||||| ||| | | || | |||| | |
sh02579 3388 AGACCTGGCTTCCAGTCCCAGCTCCACCATTTTTCTAGCCAGAGTAAAAT 3437
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mic33003 2654 ATAGT.CCCCAAGGCCTTGCTCT........................... 2675
| | | |||||||| |
sh02579 3438 ACCTTGACATGAGGCCTTGACATTCAGTTTTCTCATCTGCGAACAGGATG 3487
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mic33003 2676 ........GTGCTTCTTTATTGGGGATTGGGGGTAAGATCCTGAAGAGGT 2717
| | | | | | | || | ||| | | |||| | | |
sh02579 3488 TAATGATAGGTCCTATCTCTGGAGGTTGGGGAGCAGGATC...AGTAAGG 3534
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mic33003 2718 AGCTAAAGGCTCCAAGGCCAGACCTAGATGCTGAC.CATAGCAGGGAGTA 2766
| | | || ||| | ||| ||| | || || || | | |
sh02579 3535 CCCACAGGTACCCTGTGCCCAGCTTAGCGCCTGGCTCAGAGAAGTGGGAA 3584
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mic33003 2767 ..................GGGAGAAACAGACT.................. 2780
||||| ||| ||
sh02579 3585 CAGCTGGTAGCTATTGCTCAGAGAAGCAGCCTTCTGTCTTAAGGATGTGA 3634
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mic33003 2781 ...............................TGGAGGAGCTTCCAGGCG. 2798
| |||| ||||||| ||
sh02579 3635 CATAATGTATCTGACTCCCGAATGAAATGTCTAGAGGTCCTTCCAGCCGC 3684
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mic33003 2799 ......................................TTGCCTGGGCCT 2810
||| ||
sh02579 3685 AGCTGGAGTGGACACTCTTGCCCTCATCGGTCTTCCTAGAGCCAGGTTTA 3734
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mic33003 2811 AGGCTGCATTGTCCTGGTACAGCTGGGAATACTGAGTCTGGAGAGGCGAA 2860
||| | | | || | || | || ||| |||| |
sh02579 3735 AGGTTTCCAGGGCCCTTCCCTCCTTGCCCCTTTGCCCCTGCCCAGGC.AT 3783
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mic33003 2861 TGGTTACCTGAGGTT.......................CAGGGCAGCTTC 2887
| ||||||||| || ||| |
sh02579 3784 TCCTTACCTGAGCTTCTCTTCCTGTCCTTGGGAAGGCCCAGTCTGTGATG 3833
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mic33003 2888 ACATTCTCTGCCTCCTGCTTCTCAGCCCTGTGGCTCTCCACTCTGTCCAC 2937
|| || |||| || | | |||| || ||
sh02579 3834 GGCTTGGGTGGGCACTGCCCCTGGTGGAGGGCCCCCTCCCCTAATCCCTG 3883
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mic33003 2938 ACTTGCCGTG....GTGAGATGAGGAGCTCACTTAAGACCCCAG...TTA 2980
|||||| || || || | | |||||| ||
sh02579 3884 GGCAGCCGTGTCCTGTCAGCAAAGCCCACCTCCATCCTCCCCAGCCCCTA 3933
4101 ----+----*----+----*----+----*----+----*----+----* 4150
Y Q G L P P G K
mic33003 2981 ACTTGTGAGCACTCACACAGTATCAGGGGCTGCCGCCAGGG.....CAAG 3025
| ||||| | | || | | || || | || ||| ||||
sh02579 3934 ATTTGTGCCCTTGCTTCTAGGAGCTGGACATGTCCCCTGGGGACCCCAAG 3983
E L D M S P G D P K
4151 ----+----*----+----*----+----*----+----*----+----* 4200
V L Q A P D T S L H Q R K T G E G
mic33003 3026 GTACTGCAGGCGCCTGACACAAGCCTCCACCAAAGAAAGACAGGTGAGGG 3075
||| | | | ||| ||| |||| || | |
sh02579 3984 TGGCTGGACGTGATTGAGCGTGACCTGCACCGGCAGTTCCCATTCCATGA 4033
W L D V I E R D L H R Q F P F H E
4201 ----+----*----+----*----+----*----+----*----+----* 4250
- E V G L L D K A L - L
mic33003 3076 GA...........GAAGTGGGCCTCCTTGATAAAGCGCTACT.....TTC 3109
|| | ||||| | | | | ||| | | |
sh02579 4034 GATGTTTGTGTCCCGGGGGGGCCACGGCCAGCAGGACCTATTCCGTGTGC 4083
M F V S R G G H G Q Q D L F R V L
4251 ----+----*----+----*----+----*----+----*----+----* 4300
L A D T V H M P - L G L C L T *
mic33003 3110 TGTTGGCTGACACGGTCCACATGCCAG.GCTGGGCTTGTGTCTGACATAA 3158
|| ||| ||||| | || ||| | | ||||| || | | | |
sh02579 4084 TGAAGGCCTACACGCTGTACCGGCCCGAGGAGGGCTACTGCCAGGCCCAG 4133
K A Y T L Y R P E E G Y C Q A Q
4301 ----+----*----+----*----+----*----+----*----+----* 4350
E E - N V L L L Q V P H L H -
mic33003 3159 GAGGAGTT...CAATGTCCTCCTCCTCCAAGTGCCACATTTGCACCC... 3202
| | | | |||| | ||| | || |||| | ||| |
sh02579 4134 GCGCCCATTGCCGCTGTCTTGCTCATGCATATGCCTGCTGAGCAAGCCTT 4183
A P I A A V L L M H M P A E Q A F
4351 ----+----*----+----*----+----*----+----*----+----* 4400
K P L T Q V S R G
mic33003 3203 .........................AAGCCCCTCACCCAAGTGAGCAGAG 3227
||| ||| || ||| |
sh02579 4184 CTGGTGCCTGGTACAGATCTGTGAGAAGTACCTGCCCGGCTACTACAGCG 4233
W C L V Q I C E K Y L P G Y Y S E
4401 ----+----*----+----*----+----*----+----*----+----* 4450
R W R V R Q V L S Y N - * * L A
mic33003 3228 GGCGGTGGAGGGTCAGGCAGGTGCTCAGCTACAACC..TGATAGTTGGCG 3275
| | || | ||| || | | | | || | | | || |
sh02579 4234 AGAAACTGGAGGCGATCCAGCTGGACGGGGAGATCCTTTTCTCGCTGTTG 4283
K L E A I Q L D G E I L F S L L
4451 ----+----*----+----*----+----*----+----*----+----* 4500
V E N R V S L G E A P L L L R K
mic33003 3276 GTG.AGGAGAACAGGGTGTCCCTGGGAGAGGCCCCCCTTCTGCTGAGGAA 3324
| ||| | |||| ||| | | || || | || |
sh02579 4284 CAGAAGGTGTCGCCGGTGGCCCACAAGCACCTCAGCCGTCAGAAGATCGA 4333
Q K V S P V A H K H L S R Q K I D
4501 ----+----*----+----*----+----*----+----*----+----* 4550
Q L F - V K Q * W L F G L R P S
mic33003 3325 GCAGCTTTTCTA.GTCAAACAATAGTGGTTGTTCCTGGCCTGAGACCAAG 3373
| ||| |||| | | | ||| || ||| | | | | | ||
sh02579 4334 CCCGCTCCTCTATATGACAGAATGGTTCATGTGC..GCCTTCTCCCGAAC 4381
P L L Y M T E W F M C A F S R T
4551 ----+----*----+----*----+----*----+----*----+----* 4600
W A S S R G Q G G R D - D S Q
mic33003 3374 CTGGGCCAGACCATAGCAGGGGACAGGGAGGGAGGGACA..GACTCACAG 3421
|| | || | ||| | | | | | |||||| ||
sh02579 4382 CTTGCCCTG....GAGCTCTGTGCTGCGTGTCTGGGACATGTTCTTCTGT 4427
L P W S S V L R V W D M F F C
4601 ----+----*----+----*----+----*----+----*----+----* 4650
G A F R H C L G L A R V V L V Q L
mic33003 3422 GGAGCTTTTAGGCATTGCCTGGGCCTAGCACGTGTTGTCCTGGTACAACT 3471
| || | | ||| || |||| ||||| | || | | |
sh02579 4428 GAAGGTACTGGGCTGGGCTTGGGGGGAGCACCCCTGTCCCCAGCAGCCCA 4477
E G T G L G L G G A P L S P A A H
4651 ----+----*----+----*----+----*----+----*----+----* 4700
G R L R L E R Q T V T R D S G Q L
mic33003 3472 GGGGAGACTGAGGCTAGAAAGGCAAACGGTTACCAGAGACTCTGGGCAGC 3521
| | || || |||| | || | || |
sh02579 4478 CAGTGGGGCCTCTCTTTGCAGAGAAACCCCAAAAAGCTTCCTTGTACTTA 4527
S G A S L C R E T P K S F L V L T
4701 ----+----*----+----*----+----*----+----*----+----* 4750
A H S P
mic33003 3522 TTGCACACTCTCCA.................................... 3535
||| || | |||
sh02579 4528 CTGCCCATCCCCCATGCAGGGGTCAAGATCATCTTCCGGGTGGGGCTGGT 4577
A H P P C R G Q D H L P G G A G
4751 ----+----*----+----*----+----*----+----*----+----* 4800
P P A S H P V V S Y
mic33003 3536 CCTCCTGCCTCTCACTCCTGTGGTTTCCTACTCTGTTCACACTTGCTGTG 3585
|| ||| | | | ||| | | ||| | ||| | ||| |
sh02579 4578 GCTGCTGAAGCACGC.GCTGGGCTCCCCTGAGAAGGTCAAGCCTGCCAGG 4626
A A E A R A G L P *
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mic33003 3586 GTGAAATGGGCTCAGCCTTTGAAAAGCACCCCCCAACCCCCTTAGTTCTC 3635
| | | | | | || || | |||| | |
sh02579 4627 GCCAGTACGAGACCATCGAGCGACTGCGGAGCCTCAGCCCCAAGATCATG 4676
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mic33003 3636 CAGGGGACAGGCCAGGATGTGACGGCTGCACACTGTTCCATGAGAATTAT 3685
|||| | | | || | || | | | || ||| |
sh02579 4677 CAGGAGGCCTTTCTGGTCCAGGAGGTGGTGGAGTTGCCCGTGACAGAGCG 4726
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mic33003 3686 CTGGAGCTAGC....................................... 3696
| || |||
sh02579 4727 CCAGATTGAGCGCGAACACCTCATTCAGCTGCGGCGCTGGCAGGAGACCC 4776
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mic33003 3697 ......AAAGCCAGGAACAGGACTGAGCCCAGCTTCCTTCTGCCTGTGAT 3740
| ||| | | || ||| | | |||| | |
sh02579 4777 GGGGTGAGCTGCAGTGCCGCTCCCCGCCCAGGCTGCATGGTGCCAAGGCT 4826
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mic33003 3741 GCAGGGTCTGGAGCATCAAGTCCTGCGTGGGCCTGTTGGGTCTTGATCAC 3790
| || || | | |||| | ||| | | | |
sh02579 4827 ATCTTGGATGCAGAACCTGGTCCCCGGCCTGCC..CTACAACCTTCACCA 4874
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mic33003 3791 ACCCAAGGCCTGCTTTAAACTACCTTGTTTAAAGCCTCCAACCTGAAGCC 3840
|| ||||| | | || | | |||||| |||||
sh02579 4875 TCCATCCACCTGCCCCTAGATGCCCCCCTCCCTGGCTCCAAAGCCAAGCC 4924
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mic33003 3841 GAGTGTCTGGGCCAAACAAG.............................. 3860
| |||| ||||
sh02579 4925 CA.......AGCCACCCAAGCAGGCCCAGAAGGAGCAGCGGAAACAGATG 4967
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mic33003 3861 .........GGCCCTTTGGAGCATGCCCCATCCTGCCGTGAAATCAACCT 3901
|| | ||||| | ||||| || ||||||| |
sh02579 4968 AAGGGGAGAGGGCAGCTGGAGAAGCCCCCAGCC.....CCAAATCAAGCC 5012
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mic33003 3902 GTGCT..TGCTCGTTTCTGCTCAGCCTTG.............GGGTTTTC 3936
|| | || || | | | | | || | | |
sh02579 5013 ATGGTGGTGGCCGCTGCAGGAGATGCATGTCCCCCACAGCATGTGCCCCC 5062
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mic33003 3937 TTAAACCTTGATCACTGGGGTGTCTGCCAGTGCTTAGGGGCCTTCTTGGA 3986
| || | | || || ||| | | | || | |
sh02579 5063 GAAGGACTCAGCCCCCAAGGACTCAGCCCCTCAGGATTTGGCTCCCCAGG 5112
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mic33003 3987 TCTGTAGCTAATTTAGATGTGTTCAGGCCAGTTGAGTTCTGCAAATGATG 4036
||| | | | | || | |||| || | | ||
sh02579 5113 TCTCAGCCCACCACCGCTCCCAGGAGAGC..TTGACGTCCCAAGAGAGTG 5160
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mic33003 4037 AG..............ACGCTTTAAGAAAACTTCAACAGGGAGGTCTCTG 4072
|| || || || || | ||||| || |||
sh02579 5161 AGGACACCTACTTGTAACCCTGGCAGCTAAGGCCTCCAGGGCGGGGTCTC 5210
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mic33003 4073 GTTTGATACCCAGGGAACCTCAAATACTATGGCCTGTCC........... 4111
| | || || | | || | || | |||
sh02579 5211 CATATAACTACACGGTTCATGAACTGACATTCCACATCCTGCCCACCCTC 5260
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mic33003 4112 ......CCTCAGTGTCTGAGCCCTGGGC...................... 4133
|| || ||| | ||||||
sh02579 5261 TGAGGGCCAAGCTGCCTGGCCACTGGGCTGGGCTGGAGTCTGGCTGGTCC 5310
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mic33003 4134 ............................ATTCTCACTTCAGGTACTTA.G 4154
||||| || | ||||
sh02579 5311 AACACAGATTCTGCCTGGTCCAACACAGATTCTGCCTGAGCCTCCTTATT 5360
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mic33003 4155 GGTTGTCCCTGGAATAAGATTCAGAATCTAGGGGTAAGGGCTGGAGAGAT 4204
|| || | | | | |||| | | ||||| ||
sh02579 5361 TATTTTCTTTACAGTGGCACTCAGGCTGGCCCAGCCAGGGCAGG...... 5404
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mic33003 4205 GGCTCAGCAGTTAAGAGC..ACTGACTGCTCTTCCGAAGGTCCCGAGTTC 4252
||| || || | | | | | ||| | ||| ||
sh02579 5405 ....CAGAAGCTAGGGCCTGGGGGGTGGGGCCTCCTTCAGCCCCCTCCTC 5450
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mic33003 4253 AAATCCCAGCAACCACGTGGTTCACAACCATCCGAAATGAGATCTGATAC 4302
| || | |||| | | | | || | |
sh02579 5451 CTGGGGGATGCTCCCCAGGGTTAGGGTGCTGGTGTGAGGGGAAAGGGTGG 5500
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mic33003 4303 CCTCTTCTGGTGTGCCTGAAGACACAGTATACTTACATATAATAAATAAA 4352
| |||| ||| ||| | | |||||| |
sh02579 5501 GGTGTTCTTTGTGTAAAATAGAAACATGGTTTTGTACAGAAATAAACAGC 5550
5751 ----+----*- 5761
mic33003 4353 ATTT....... 4356
||
sh02579 5551 CTTGTATAGAG 5561