FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0936.ptfa, 503 aa vs ./tmplib.26680 library 1768514 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.1132+/-0.00728; mu= 2.2473+/- 0.485 mean_var=286.4826+/-67.972, 0's: 0 Z-trim: 10 B-trim: 0 in 0/36 Lambda= 0.0758 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0904 ( 1051 res) mpg00351 (1051) 333 50 1.1e-06 mKIAA0834 ( 453 res) mpg00938 ( 453) 325 48 1.3e-06 mKIAA1791 ( 1452 res) mpm08259 (1452) 325 49 2.6e-06 mKIAA4107 ( 1176 res) mfj68342 (1176) 263 42 0.00025 mKIAA1028 ( 546 res) mbg03568 ( 546) 238 39 0.001 >>mKIAA0904 ( 1051 res) mpg00351 (1051 aa) initn: 353 init1: 273 opt: 333 Z-score: 212.1 bits: 49.8 E(): 1.1e-06 Smith-Waterman score: 347; 26.582% identity (30.523% ungapped) in 395 aa overlap (1-352:433-819) 10 20 mKIAA0 KPENLLCMGPELVKIADFGLAREIRSRP-- : :.: . .:.::::::: :. mKIAA0 FSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESR 410 420 430 440 450 460 30 40 50 60 70 80 mKIAA0 PYTDYVSTRWYRAPEVLLRSTNYSSPIDIWAVGCIMAEVYTLRPLFPGASEIDTIFKICQ :::. : : ::: ::.:: :. ::.:. :::..:..: .:.: . :. . : . mKIAA0 PYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISR 470 480 490 500 510 520 90 100 110 120 130 140 mKIAA0 VLGTPKKTDWPEGYQLSSAMNFLWPQC-IPNNLKTLIPNASSEAIQLLRDLLQWDPKKRP . :.: . ::. .: .: . :. :. . : :..:: .: ::.:: mKIAA0 LCGSPCPAVWPDVIKLPY-FNTMKPKKQYRRRLREEFSFIPSAALDLLDHMLTLDPSKRC 530 540 550 560 570 580 150 160 170 180 190 mKIAA0 TASQALRYPYFQ------IGHPLGIISKDSGK---PQREVQDKTGPPPYIKPAPPAQAPA :: :.:. ... .. : .: . .:. : ..: :. ::..: mKIAA0 TAEQTLQSDFLKDVELSKMAPPDLPHWQDCHELWSKKRRRQRQSGI--VIEDPPPSKASR 590 600 610 620 630 200 210 220 230 mKIAA0 KAYTL-ISSRPSQASQP--PQHS---VHPYKGDV----SRTEQLSHVQ----------EG : : ...: . ..: :: . ..: ::. . :.::.. . . mKIAA0 KETTSGTTAEPVKNNSPAPPQPAPVKAEPGPGDAVGLGDITQQLNQSELAVLLNLLQSQT 640 650 660 670 680 690 240 250 260 270 280 290 mKIAA0 KPSPPFFPSLHNKNLQPKILASLEQKNGEIKPKSRRRWGLISRSTKGSDDWADLDDLDFS : : . .: : . .:.. .:: : :. .. : . . :.. : ..: mKIAA0 DLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTE-----ASSQQQDSESIAPEESLKEV 700 710 720 730 740 750 300 310 320 330 340 mKIAA0 PSLTRI--DVKNKKRQSDDTLCRFESVLD------LKPSESVGT---GTTVSTQASSQRR ::. . ... ....: ...:: .: .: .:. .:. .... . : mKIAA0 PSVPVVLPPAEQTTPEASNTPADMQNVLAVLLSQLMKTQEPAGNLEENTNDKNSGPQGPR 760 770 780 790 800 810 350 360 370 380 390 400 mKIAA0 DTPTLQSSAKQHYLKHSRYLPGINIRNGVLPNPGKDFLPSNSWSSSGLSGKSSGTVSVVS :::. mKIAA0 RTPTMPQEEAAEKRPPEPPGPPPPPPPPPLVEGDLSSAPQELNPAVTAALLQLLSQPEAE 820 830 840 850 860 870 >>mKIAA0834 ( 453 res) mpg00938 (453 aa) initn: 328 init1: 159 opt: 325 Z-score: 211.4 bits: 48.5 E(): 1.3e-06 Smith-Waterman score: 325; 39.877% identity (41.401% ungapped) in 163 aa overlap (1-158:242-403) 10 20 mKIAA0 KPENLLCMGPELVKIADFGLAREIRSRPP- ::.::: .:.::::::: .: : mKIAA0 LHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARA-KSVPSH 220 230 240 250 260 270 30 40 50 60 70 80 mKIAA0 -YTDYVSTRWYRAPEVLLRSTNYSSPIDIWAVGCIMAEVYTLRPLFPGASEI-DTIFKIC :.. : : ::: :.::: ::.::. .:.:.::::..:. ::: ..: : . .: mKIAA0 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIF 280 290 300 310 320 330 90 100 110 120 130 140 mKIAA0 QVLGTPKKTDWPEGYQLSSAMNFLWPQCIPNNLKTLIPNAS--SEAIQLLRDLLQWDPKK :::::.. :: ..: . ..:. . : ..: .: ::: .::. mKIAA0 LVLGTPNEDTWPGVHSLPHFKPERFTVYSSKSLRQAWNKLSYVNHAEDLASKLLQCSPKN 340 350 360 370 380 390 150 160 170 180 190 200 mKIAA0 RPTASQALRYPYFQIGHPLGIISKDSGKPQREVQDKTGPPPYIKPAPPAQAPAKAYTLIS : .:. :: . ::. mKIAA0 RLSAQAALSHEYFSDLPPRLWELTDMSSIFTVPNVRLQPEAGESMRAFGKNNSYGKSLSN 400 410 420 430 440 450 >>mKIAA1791 ( 1452 res) mpm08259 (1452 aa) initn: 315 init1: 271 opt: 325 Z-score: 205.8 bits: 49.1 E(): 2.6e-06 Smith-Waterman score: 331; 29.268% identity (33.071% ungapped) in 287 aa overlap (1-271:840-1109) 10 20 mKIAA0 KPENLLCMGPELVKIADFGLAREIRSRP-- : :.: . .:.::::::: :. mKIAA1 FNENHIKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESR 810 820 830 840 850 860 30 40 50 60 70 80 mKIAA0 PYTDYVSTRWYRAPEVLLRSTNYSSPIDIWAVGCIMAEVYTLRPLFPGASEIDTIFKICQ :::. : : ::: ::.:: :. ::.:. :::..:..: .:.: . .:. . : . mKIAA1 PYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 870 880 890 900 910 920 90 100 110 120 130 140 mKIAA0 VLGTPKKTDWPEGYQLSSAMNFLWPQC-IPNNLK---TLIPNASSEAIQLLRDLLQWDPK . :.: . ::. .: .: . :. .:. ..:: : :..:. .: ::. mKIAA1 ICGSPCPAVWPDVIKLPY-FNTMKPKKQYRRKLREEFVFIPAA---ALDLFDYMLALDPS 930 940 950 960 970 980 150 160 170 180 190 mKIAA0 KRPTASQALRYPYFQ---------IGHPLGIISKDSGKPQREVQDKTGPPPYIKPAPPAQ :: :: :::. ... . :: .. . .:. : . : .. . mKIAA1 KRCTAEQALQCEFLRDVEPSKMPPLDLPLWQDCHELWSKKRRRQKQMGMTDDLSTI---K 990 1000 1010 1020 1030 1040 200 210 220 230 240 250 mKIAA0 APAKAYTLISSRPSQASQPPQHSVHPYKGDVSRTEQLSHVQEG-KPSPPFFPSLHNKNLQ :: : .: . .. .. :: . : . .... :.: : : . : :. ... mKIAA1 APRKDLSL--GLDDSRTNTPQGVLPPAQ---LKSQSNSNVAPGEKQTDPSTPQQESS--- 1050 1060 1070 1080 1090 260 270 280 290 300 310 mKIAA0 PKILASLEQKNGEIKPKSRRRWGLISRSTKGSDDWADLDDLDFSPSLTRIDVKNKKRQSD : :... : . :.:: mKIAA1 -KSLGGV-QPSQTIQPKVETDAAQAAVQSAFAVLLTQLIKAQQSKQKDAMLEERENGSGH 1100 1110 1120 1130 1140 1150 >>mKIAA4107 ( 1176 res) mfj68342 (1176 aa) initn: 248 init1: 131 opt: 263 Z-score: 170.2 bits: 42.2 E(): 0.00025 Smith-Waterman score: 263; 32.667% identity (35.766% ungapped) in 150 aa overlap (1-139:333-480) 10 20 mKIAA0 KPENLLCMGPEL----VKIADFGLAREIRS ::::.. . : ::. ::: : .. : mKIAA4 LPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHV-S 310 320 330 340 350 360 30 40 50 60 70 80 mKIAA0 RPPYTDYVSTRWYRAPEVLLRSTNYSSPIDIWAVGCIMAEVYTLRPLFPGASEIDTIFKI . . :...:.:::::..: . . ::.:..::..::.. ::.::::: : : : mKIAA4 KAVCSTYLQSRYYRAPEIIL-GLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYI 370 380 390 400 410 420 90 100 110 120 130 mKIAA0 CQVLGTPKKTDWPEGYQLSSAMNF-------LWPQCIPNNLKTLIPNASSEAIQLLRDLL :. : : . : . . .: :: :.. .. :.:: . . . : mKIAA4 SQTQGLPAEYLLSAGTKTTRFFNRDTDSPYPLWRLKTPDDHEAETGIKSKEARKYIFNCL 430 440 450 460 470 480 140 150 160 170 180 190 mKIAA0 QWDPKKRPTASQALRYPYFQIGHPLGIISKDSGKPQREVQDKTGPPPYIKPAPPAQAPAK . mKIAA4 DDMAQVNMTTDLEGSDMLVEKADRREFIDLLKKMLTIDADKRVTPIETLNHPFVTMTHLL 490 500 510 520 530 540 >>mKIAA1028 ( 546 res) mbg03568 (546 aa) initn: 390 init1: 170 opt: 238 Z-score: 159.1 bits: 39.1 E(): 0.001 Smith-Waterman score: 369; 33.025% identity (42.972% ungapped) in 324 aa overlap (1-270:198-500) 10 20 mKIAA0 KPENLLCMG--PE--LVKIADFGLAREIRS :: :.: :: :: :::::.:.:: . : mKIAA1 LPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 170 180 190 200 210 220 30 40 50 60 70 80 mKIAA0 R-PPYTDY---VSTRWYRAPEVLLRSTNYSSPIDIWAVGCIMAEVYTLRPLFPGASEI-- : .: : : ::::::.:: . .:.. :::::.:::.::. : .:.: .: mKIAA1 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 230 240 250 260 270 280 90 100 110 120 mKIAA0 -------DTIFKICQVLGTPKKTDWPEGYQLSSAMNFLWPQCIPNNLKTLIPNAS----- : . .: .:.: : :: . .. .: . .: :.: mKIAA1 TSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPE-----YPTLQKDFRRTTYANSSLIKYM 290 300 310 320 330 340 130 140 150 160 170 mKIAA0 --------SEAIQLLRDLLQWDPKKRPTASQALRYPYFQIGHPLGIISKDSG----KPQR :... ::. :: :: :: :. :::. :::: :: .. .: :.: mKIAA1 EKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFQ-EDPLPTLDVFAGCQIPYPKR 350 360 370 380 390 400 180 190 200 210 220 mKIAA0 EVQ---------DKTGPP---PYIKPAPPAQAPAKAYTLISSRPSQASQPPQHSVHPYKG : ::. : :. .:: ::: : : :: :::.: .: mKIAA1 EFLNEDEPEEKGDKNQPQQQNPHQQPAAPAQQTAA--------PPQAP-PPQQSSAQTNG 410 420 430 440 450 230 240 250 260 270 mKIAA0 DVSRTEQ--------LSHVQEGKPSPPFFPSLHNKNLQPKILASLEQKNGEIKPKSRRRW .. . :.: :. :. : : .:.: : ...: . :. mKIAA1 TAGGATAGGGGAGAGLQHSQD--PGLNQVPP----NKKPRIGPSGANSGGPVMPSDYQHS 460 470 480 490 500 280 290 300 310 320 330 mKIAA0 GLISRSTKGSDDWADLDDLDFSPSLTRIDVKNKKRQSDDTLCRFESVLDLKPSESVGTGT mKIAA1 SSRLNYQSSVQGSSQSQSTLGYSSSQQSTQYHSSHQTHRY 510 520 530 540 503 residues in 1 query sequences 1768514 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:32:19 2006 done: Mon Mar 27 10:32:20 2006 Scan time: 0.720 Display time: 0.090 Function used was FASTA [version 3.4t11 Apr 17, 2002]