FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1758.ptfa, 1565 aa vs ./tmplib.26680 library 1767452 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 11.7758+/-0.00995; mu= -10.8436+/- 0.659 mean_var=606.2457+/-141.796, 0's: 0 Z-trim: 21 B-trim: 2 in 1/35 Lambda= 0.0521 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1433 ( 655 res) mpm11208 ( 655) 782 75 7.5e-14 mKIAA1334 ( 992 res) mpm09174 ( 992) 325 41 0.0021 mKIAA1139 ( 1224 res) mpg00286 (1224) 323 40 0.0027 mKIAA1981 ( 296 res) mic06024 ( 296) 283 37 0.009 >>mKIAA1433 ( 655 res) mpm11208 (655 aa) initn: 734 init1: 441 opt: 782 Z-score: 341.0 bits: 74.6 E(): 7.5e-14 Smith-Waterman score: 1277; 38.788% identity (44.599% ungapped) in 660 aa overlap (14-595:4-655) 10 20 30 40 50 60 mKIAA1 TDSASCEPDLSRTPGDTEGATAEAAKKEFDVDTLSKSELRMLLSVMEGELEARDLVIEAL : : .:: . . .... ::: :: :.:..:::::::::::::: mKIAA1 DFVPEDQSAATNYQTFR-MNLEKLSKPELLTLFSILEGELEARDLVIEAL 10 20 30 40 70 80 90 100 110 mKIAA1 RARRKEVFIQERYGRFNLNDPFLALQRDYEA--GPGDKEK-PVCTNPLSILEAVMAHCRK .:.....::.::::..:..::..:::::.:. .:.:: ::::::::.:.::: .:.. mKIAA1 KAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDSEKQPVCTNPLSVLKAVMKQCKN 50 60 70 80 90 100 120 130 140 mKIAA1 MQERMSAQLVAAESRQKK------------------------------------LEMEKL ::::: .::.:::::..: ::.:: mKIAA1 MQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKS 110 120 130 140 150 160 150 160 170 180 190 200 mKIAA1 QLQALEQEHKKLAAHLEEERGKNKHVVLMLVKECKQLSGKVVEEAQKLEEVMAQLEEEKK :.. .:.:.:::...::::: ..:.. ::: ::.. ..:..::.:: :. .:..::. mKIAA1 QVKKFEKEQKKLSSQLEEERTRHKQLSSMLVLECRKATSKAAEEGQKAGELSLKLDKEKS 170 180 190 200 210 220 210 220 230 240 250 260 mKIAA1 KTSELEEQLSAEKQRSSGMEAQLEKQLSEFDTEREQLRAKLSREEAHTTDLKEEIDKMKK ..:.:::.:.::..:. :::.:::::::: :::::::::.::: .: ::::....:: mKIAA1 RASKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTRALKEEVESLKK 230 240 250 260 270 280 270 280 290 300 310 mKIAA1 MMEQMKKGSDGKPGLSLPRKTKDKRLASISVATEGPVTRSVACQTDVV-TESTDP--VKK ...... ... . : .. .. : ..::: :. :. :::. : :: . . : mKIAA1 LVKDLEAAQQHR---STSEQGREPVTMSRGTATEPPMRVSAFCQTESVQTERSHGSVITK 290 300 310 320 330 340 320 330 340 350 360 370 mKIAA1 LPLTVPIKPSTGSPLVPTNTKGNVGPSALLIRPGIDRQSSHSDLGPSPPTALPSSANRIE : : :.:.. ....:. : : . .:.... : .:. .. . .: mKIAA1 LTDTGLPGPTTAA-YSYAKANGHCDPEIQTTRELTSDSSTENQGPPREKSAVAAQEKPVE 350 360 370 380 390 400 380 390 400 410 420 430 mKIAA1 ENG-PSTGNAP-DLSNSTPSTPSSTAPAAAQTPGTAPQNHSQAPTVHSLHSPCANT---- ..: : ..: . . ::. :: .:... . . . . :. .. : . :.. mKIAA1 NGGCPVGTETPVTMPSHLPSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSAASSPGYQ 410 420 430 440 450 460 440 450 460 470 480 mKIAA1 ---HPGLNPRIQAARFRFQGNANDPDQNGNNTQSPPSRDVSPTSRDNLVAKQLARNTVTQ . :.: :..::: .::..: : ::.... :::::::.::: :: .::::::::::: mKIAA1 SSYQVGINQRFHAARHKFQSQA-DQDQQASGLQSPPSRDLSPTLLDNSAAKQLARNTVTQ 470 480 490 500 510 520 490 500 510 520 mKIAA1 ALSRFTS-----PQAGASSRLGV---------SPGGDAGTCPPVGRT---------GLKT .:::::. : . :: .:. :: ::.. : :.. :.:. mKIAA1 VLSRFTNQGPIKPVSPNSSPFGTDYRNLASTASPRGDTSHSPTPGKVSSPLSPLSPGIKS 530 540 550 560 570 580 530 540 550 560 570 580 mKIAA1 PGAARVDRGNPPPIPPKKPGLSQTPSPPHP----QLRASNAGAKVDNKIVASPPSTLPQG : :..::::::::::::::. . : : . .::. .: : :: ... .: mKIAA1 PTIPRAERGNPPPIPPKKPGLTPSQSATTPVTKTHSQASSLAATEDLASSCSPSAVVANG 590 600 610 620 630 640 590 600 610 620 630 640 mKIAA1 TKVVNEENVPKSSSPQLPPKPSIDLTVAPAGCPVSALATSQVGAWPAGTPGLNQPACSDS : : .: :: mKIAA1 KDV--EILLPTSS 650 >>mKIAA1334 ( 992 res) mpm09174 (992 aa) initn: 478 init1: 280 opt: 325 Z-score: 153.4 bits: 40.5 E(): 0.0021 Smith-Waterman score: 325; 33.690% identity (35.000% ungapped) in 187 aa overlap (670-851:34-218) 640 650 660 670 680 690 mKIAA1 SDSSLVIPATVAFCSSINPVSASSRSPGASDSLLVAA-SGWSPSLTPLLMSGGPAPLA-- : :: :. .: . ... :: . : . mKIAA1 QDFGRLNGLNMKSLKAKFRKSDTNEWNKNDDRLLQAVENGDAEKVASLLGKKGASATKHD 10 20 30 40 50 60 700 710 720 730 740 750 mKIAA1 --GRPTLLQQAAAQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNA :. : .. :::.:.: :...... :.:.. . .:::::. :::::: .:.: ::. mKIAA1 SEGK-TAFHLAAAKGHVECLKVMVTH-GVDVTAQDSSGHSALHVAAKNGHPECIRKLLQY 70 80 90 100 110 120 760 770 780 790 800 810 mKIAA1 EARVDAADKNGFTPLCVAAAQGHFECIELLTAYNANINHSAAGGQTPLYLACKNGNKECI .. .. :..: : : ::::: .. ..:: ... :: . :. :: .: .::..: mKIAA1 KSPAENIDNSGKTALHYAAAQGCLQAVQLLCEHKSPINLKDLDGNIPLLVAVQNGHSEAC 130 140 150 160 170 180 820 830 840 850 860 870 mKIAA1 KLLLEAGTDRSIKTRDGWTPIHAAVDTGNVDSLKLLMYHRVRAHGNSLSSEEPKSGLFSL ..::. :.: . . ..: : . : .::. ... :. mKIAA1 HFLLDHGADVNSRDKNGRTALMLACETGSSNTVDALIKKGADLSLVDSLGHNALHYSKLS 190 200 210 220 230 240 880 890 900 910 920 930 mKIAA1 NGGESPTGPSKPVVPADLINHADKEGWTAAHIAASKGFKNCLEVLCRHGGLEPERRDKCN mKIAA1 ENAGIQNLLLSKISQDADLKTPTKPKQHDQVSKISSERSGTPKKRKAPPPPISPTQLSDV 250 260 270 280 290 300 >>mKIAA1139 ( 1224 res) mpg00286 (1224 aa) initn: 275 init1: 275 opt: 323 Z-score: 151.6 bits: 40.5 E(): 0.0027 Smith-Waterman score: 323; 29.293% identity (30.420% ungapped) in 297 aa overlap (697-988:37-327) 670 680 690 700 710 720 mKIAA1 GASDSLLVAASGWSPSLTPLLMSGGPAPLAGRPTLLQQAAAQGNVTLLSMLLNEEGLDIN : : .:. .:. ... ..: . . :.:: mKIAA1 PCFFLDLEVPEPDPVIRMGREQDLILAVKNGDVTCVQKLVAKVKAAKTKLLGSTKRLNIN 10 20 30 40 50 60 730 740 750 760 770 780 mKIAA1 YSCEDGHSALYSAAKNGHTDCVRLLLNAEARVDAADKNGFTPLCVAAAQGHFECIELLTA :. :: :::. :: .: . . :::.:.: :: :.::. :: :: ::..: ..:: mKIAA1 YQDADGFSALHHAALGGSLELIALLLEAQATVDIKDSNGMRPLHYAAWQGRLEPVRLLLR 70 80 90 100 110 120 790 800 810 820 830 840 mKIAA1 YNANINHSAAGGQTPLYLACKNGNKECIKLLLEAGTDRSIKTRDGWTPIHAAVDTGNVDS .: .: .. :: ::.:: . :. : ..::. .. . .. ::. : . : . mKIAA1 ASAAVNAASLDGQIPLHLAAQYGHYEVSEMLLQHQSNPCLVNKLKKTPLDLACEFGRLKV 130 140 150 160 170 180 850 860 870 880 890 900 mKIAA1 LKLLMY-HRVRA--HGNSLSSEEPK-SGLFSLNGGESPTGPSKPVVPADL-INHADKEGW .::. : : .:.. . .:. . . : . .. . .. : . ::. : : mKIAA1 AQLLLNSHLCVALLEGEAKDPCDPNYTTPLHLAAKNGHREVIRQLLKAGIEINRQTKTG- 190 200 210 220 230 240 910 920 930 940 950 960 mKIAA1 TAAHIAASKGFKNCLEVLCRHGGLEPERRDKCNRTVHDVATDDCKHLLENLNALKIPLRI :: : :: : . ...: . ::.. . :. :.:. :.... . .: :: mKIAA1 TALHEAALYGKTEVVRLLLE-GGVDVNIRNTYNQTALDIVNQFTTS--QASREIKQLLRE 250 260 270 280 290 300 970 980 990 1000 1010 1020 mKIAA1 SVGEIQPSNDVSDDFECEHTICTLNIRKQTSWEDFSKAVSQALTNHFQAISSDGWWSLED . : .. . :: : .::.: mKIAA1 ASGILKVR--ALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRVGYF 310 320 330 340 350 360 >>mKIAA1981 ( 296 res) mic06024 (296 aa) initn: 384 init1: 239 opt: 283 Z-score: 142.1 bits: 36.7 E(): 0.009 Smith-Waterman score: 283; 28.622% identity (30.000% ungapped) in 283 aa overlap (606-880:19-296) 580 590 600 610 620 630 mKIAA1 PSTLPQGTKVVNEENVPKSSSPQLPPKPSIDLT-VAPAG-CPV---SALATSQVGAWPAG ::. : : ::. .: . : : . mKIAA1 KQLCLCAAASFALRLSPTDLSSCPPCGRCPIPKPAARGRRQGQDWGKS 10 20 30 40 640 650 660 670 680 690 mKIAA1 TPGLNQPACSDSSLVIPATVAFCSSINPVSASSRSPGASDSLLVAASGWSPSLTPLLMSG : : . ... . . .: ... :.. . . : : :.: : . : .: .: mKIAA1 DQRLLQAVENNDVARVASLIAH-KGLVPTKLDPE--GKSAFHLAAMRGAAGCLEVMLAQG 50 60 70 80 90 100 700 710 720 730 740 mKIAA1 GPA---PLAGRPTLLQQAAAQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDC . . :: .: . :: :. :..:: : . .. .: .::. :: .: .: mKIAA1 ADVMSTDGAGYNAL-HLAAKYGHPECLKQLL-EASCVVDIEDSSGWTALHHAAAGGCLSC 110 120 130 140 150 160 750 760 770 780 790 800 mKIAA1 VRLLLNAEARVDAADKNGFTPLCVAAAQGHFECIELLTAYNANINHSAAGGQTPLYLACK .:: . .:... :..: ::: .:: . : . .:: .: : . :.: :.:::. mKIAA1 SKLLCSFKAHMNPRDRSGATPLIIAAQMCHTDLCRLLLQQGAATNDQDLQGRTALMLACE 170 180 190 200 210 220 810 820 830 840 850 860 mKIAA1 NGNKECIKLLLEAGTDRSIKTRDGWTPIHAAVDTGNVDSLKLLMYHRVRAHGNSLSSEEP .:. : ...::..:.. :: : : .. ::. :.:: :. : : :: mKIAA1 GGSPETVEVLLQGGAQLSITDALGQDATHYGALTGDKLILQLLHESARRSSPPSASLEED 230 240 250 260 270 280 870 880 890 900 910 920 mKIAA1 KSGLFSLNGGESPTGPSKPVVPADLINHADKEGWTAAHIAASKGFKNCLEVLCRHGGLEP .. : : ..: mKIAA1 SGEASSQVGIRNP 290 1565 residues in 1 query sequences 1767452 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:52:34 2006 done: Mon Mar 27 10:52:36 2006 Scan time: 1.320 Display time: 0.190 Function used was FASTA [version 3.4t11 Apr 17, 2002]