# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mic03043.fasta.nr -Q ../query/mKIAA1428.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1428, 223 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920628 sequences Expectation_n fit: rho(ln(x))= 5.2522+/-0.000186; mu= 7.4498+/- 0.010 mean_var=81.1950+/-15.409, 0's: 39 Z-trim: 44 B-trim: 0 in 0/66 Lambda= 0.142334 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|18043974|gb|AAH19708.1| Appl1 protein [Mus musc ( 498) 1424 301.8 1.3e-79 gi|148692774|gb|EDL24721.1| RIKEN cDNA 2900057D21, ( 690) 1424 301.9 1.6e-79 gi|61212993|sp|Q8K3H0.1|DP13A_MOUSE RecName: Full= ( 707) 1424 301.9 1.6e-79 gi|148692775|gb|EDL24722.1| RIKEN cDNA 2900057D21, ( 742) 1424 301.9 1.7e-79 gi|149015719|gb|EDL75067.1| rCG39172 [Rattus norve ( 626) 1393 295.5 1.2e-77 gi|119585739|gb|EAW65335.1| adaptor protein contai ( 615) 1379 292.6 8.9e-77 gi|119585740|gb|EAW65336.1| adaptor protein contai ( 616) 1379 292.6 8.9e-77 gi|114587493|ref|XP_516550.2| PREDICTED: adaptor p ( 692) 1379 292.7 9.7e-77 gi|73985226|ref|XP_541832.2| PREDICTED: similar to ( 665) 1377 292.2 1.3e-76 gi|73985222|ref|XP_849075.1| PREDICTED: similar to ( 708) 1377 292.3 1.3e-76 gi|194221195|ref|XP_001491598.2| PREDICTED: simila ( 705) 1372 291.2 2.7e-76 gi|148743836|gb|AAI42496.1| APPL1 protein [Bos tau ( 708) 1366 290.0 6.3e-76 gi|197130945|gb|ACH47027.1| adaptor protein phosph ( 708) 1363 289.4 9.7e-76 gi|126336085|ref|XP_001362213.1| PREDICTED: simila ( 710) 1285 273.4 6.4e-71 gi|224066068|ref|XP_002193501.1| PREDICTED: simila ( 731) 1265 269.3 1.1e-69 gi|118096874|ref|XP_414344.2| PREDICTED: similar t ( 789) 1248 265.8 1.3e-68 gi|38173759|gb|AAH60752.1| MGC68986 protein [Xenop ( 708) 1229 261.9 1.9e-67 gi|149572747|ref|XP_001518632.1| PREDICTED: simila ( 501) 1215 258.9 1.1e-66 gi|158187594|gb|ABW23077.1| Appl1 [Danio rerio] ( 707) 1144 244.4 3.3e-62 gi|118596564|dbj|BAF37940.1| Similar to DCC-intera ( 713) 1069 229.0 1.4e-57 gi|194386560|dbj|BAG61090.1| unnamed protein produ ( 633) 1066 228.4 2e-57 gi|74197939|dbj|BAC33672.2| unnamed protein produc ( 644) 1042 223.4 6.3e-56 gi|47220756|emb|CAG11825.1| unnamed protein produc ( 741) 1008 216.5 8.8e-54 gi|149241630|pdb|2ELA|A Chain A, Crystal Structure ( 175) 997 213.7 1.4e-53 gi|170292158|pdb|2EJ8|A Chain A, Crystal Structure ( 160) 996 213.5 1.5e-53 gi|28302390|gb|AAH46747.1| LOC398493 protein [Xeno ( 647) 858 185.6 1.5e-44 gi|66911749|gb|AAH97563.1| Unknown (protein for MG ( 642) 844 182.8 1.1e-43 gi|189541474|ref|XP_001920119.1| PREDICTED: simila ( 145) 700 152.7 2.8e-35 gi|115530782|emb|CAL49371.1| adaptor protein conta ( 590) 611 134.9 2.6e-29 gi|12805511|gb|AAH02232.1| Appl2 protein [Mus musc ( 293) 554 122.9 5.1e-26 gi|119618169|gb|EAW97763.1| DIP13 beta, isoform CR ( 418) 555 123.3 5.8e-26 gi|224095405|ref|XP_002199735.1| PREDICTED: hypoth ( 658) 556 123.6 7e-26 gi|114646680|ref|XP_001160596.1| PREDICTED: DIP13 ( 622) 555 123.4 7.8e-26 gi|114646678|ref|XP_001160454.1| PREDICTED: DIP13 ( 632) 555 123.4 7.9e-26 gi|114646682|ref|XP_001160702.1| PREDICTED: DIP13 ( 644) 555 123.4 8e-26 gi|119618168|gb|EAW97762.1| DIP13 beta, isoform CR ( 646) 555 123.4 8e-26 gi|21707123|gb|AAH33731.1| Adaptor protein, phosph ( 664) 555 123.4 8.1e-26 gi|158254556|dbj|BAF83251.1| unnamed protein produ ( 664) 555 123.4 8.1e-26 gi|160419148|sp|Q8NEU8.3|DP13B_HUMAN RecName: Full ( 664) 555 123.4 8.1e-26 gi|193786080|dbj|BAG50931.1| unnamed protein produ ( 664) 555 123.4 8.1e-26 gi|114646672|ref|XP_001160746.1| PREDICTED: DIP13 ( 665) 555 123.4 8.2e-26 gi|114646676|ref|XP_509331.2| PREDICTED: DIP13 bet ( 671) 555 123.4 8.2e-26 gi|74220018|dbj|BAE40588.1| unnamed protein produc ( 662) 554 123.2 9.4e-26 gi|74142939|dbj|BAE42499.1| unnamed protein produc ( 662) 554 123.2 9.4e-26 gi|61212991|sp|Q8K3G9.1|DP13B_MOUSE RecName: Full= ( 662) 554 123.2 9.4e-26 gi|208431900|gb|ACI28285.1| APPL2 [Sus scrofa] ( 662) 552 122.8 1.2e-25 gi|50728844|ref|XP_416311.1| PREDICTED: similar to ( 666) 552 122.8 1.3e-25 gi|92096678|gb|AAI14673.1| Adaptor protein, phosph ( 662) 551 122.6 1.4e-25 gi|149637921|ref|XP_001508102.1| PREDICTED: simila ( 695) 551 122.6 1.5e-25 gi|119924655|ref|XP_001255457.1| PREDICTED: simila ( 712) 551 122.6 1.5e-25 >>gi|18043974|gb|AAH19708.1| Appl1 protein [Mus musculus (498 aa) initn: 1424 init1: 1424 opt: 1424 Z-score: 1585.9 bits: 301.8 E(): 1.3e-79 Smith-Waterman score: 1424; 100.000% identity (100.000% similar) in 223 aa overlap (1-223:276-498) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD :::::::::::::::::::::::::::::: gi|180 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGSMEVKSD 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA 310 320 330 340 350 360 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 370 380 390 400 410 420 160 170 180 190 200 210 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES 430 440 450 460 470 480 220 mKIAA1 DLGEEGKKRESEA ::::::::::::: gi|180 DLGEEGKKRESEA 490 >>gi|148692774|gb|EDL24721.1| RIKEN cDNA 2900057D21, iso (690 aa) initn: 1424 init1: 1424 opt: 1424 Z-score: 1584.0 bits: 301.9 E(): 1.6e-79 Smith-Waterman score: 1424; 100.000% identity (100.000% similar) in 223 aa overlap (1-223:468-690) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD :::::::::::::::::::::::::::::: gi|148 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGSMEVKSD 440 450 460 470 480 490 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA 500 510 520 530 540 550 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 560 570 580 590 600 610 160 170 180 190 200 210 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES 620 630 640 650 660 670 220 mKIAA1 DLGEEGKKRESEA ::::::::::::: gi|148 DLGEEGKKRESEA 680 690 >>gi|61212993|sp|Q8K3H0.1|DP13A_MOUSE RecName: Full=DCC- (707 aa) initn: 1424 init1: 1424 opt: 1424 Z-score: 1583.8 bits: 301.9 E(): 1.6e-79 Smith-Waterman score: 1424; 100.000% identity (100.000% similar) in 223 aa overlap (1-223:485-707) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD :::::::::::::::::::::::::::::: gi|612 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGSMEVKSD 460 470 480 490 500 510 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA 520 530 540 550 560 570 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 580 590 600 610 620 630 160 170 180 190 200 210 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES 640 650 660 670 680 690 220 mKIAA1 DLGEEGKKRESEA ::::::::::::: gi|612 DLGEEGKKRESEA 700 >>gi|148692775|gb|EDL24722.1| RIKEN cDNA 2900057D21, iso (742 aa) initn: 1424 init1: 1424 opt: 1424 Z-score: 1583.5 bits: 301.9 E(): 1.7e-79 Smith-Waterman score: 1424; 100.000% identity (100.000% similar) in 223 aa overlap (1-223:520-742) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD :::::::::::::::::::::::::::::: gi|148 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGSMEVKSD 490 500 510 520 530 540 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA 550 560 570 580 590 600 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 610 620 630 640 650 660 160 170 180 190 200 210 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES 670 680 690 700 710 720 220 mKIAA1 DLGEEGKKRESEA ::::::::::::: gi|148 DLGEEGKKRESEA 730 740 >>gi|149015719|gb|EDL75067.1| rCG39172 [Rattus norvegicu (626 aa) initn: 1393 init1: 1393 opt: 1393 Z-score: 1550.1 bits: 295.5 E(): 1.2e-77 Smith-Waterman score: 1393; 98.206% identity (99.552% similar) in 223 aa overlap (1-223:404-626) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD :::::::::::::::::::::::::::::: gi|149 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGSMEVKSD 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|149 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPYVVLYA 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 500 510 520 530 540 550 160 170 180 190 200 210 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLVLSSSQSEES ::::::::::::::::::::::.::::::::::::::::::.:.:::::::::::::::: gi|149 SEKQKEIERVKEKQQKELSKQKEIEKDLEEQSRLIAASSRPSQSGSEGQLVLSSSQSEES 560 570 580 590 600 610 220 mKIAA1 DLGEEGKKRESEA ::::::::::::: gi|149 DLGEEGKKRESEA 620 >>gi|119585739|gb|EAW65335.1| adaptor protein containing (615 aa) initn: 1321 init1: 1291 opt: 1379 Z-score: 1534.7 bits: 292.6 E(): 8.9e-77 Smith-Waterman score: 1379; 97.321% identity (99.107% similar) in 224 aa overlap (1-223:392-615) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD :::::::::::::::::::::::::::::: gi|119 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGSMEVKSD 370 380 390 400 410 420 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA 430 440 450 460 470 480 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|119 THQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 490 500 510 520 530 540 160 170 180 190 200 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLV-LSSSQSEE ::::::::::::::::::.:::::::::::::::::::::::::.::::.: :::::::: gi|119 SEKQKEIERVKEKQQKELNKQKQIEKDLEEQSRLIAASSRPNQASSEGQFVVLSSSQSEE 550 560 570 580 590 600 210 220 mKIAA1 SDLGEEGKKRESEA ::::: :::::::: gi|119 SDLGEGGKKRESEA 610 >>gi|119585740|gb|EAW65336.1| adaptor protein containing (616 aa) initn: 1321 init1: 1291 opt: 1379 Z-score: 1534.7 bits: 292.6 E(): 8.9e-77 Smith-Waterman score: 1379; 97.321% identity (99.107% similar) in 224 aa overlap (1-223:393-616) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD :::::::::::::::::::::::::::::: gi|119 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGSMEVKSD 370 380 390 400 410 420 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA 430 440 450 460 470 480 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|119 THQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 490 500 510 520 530 540 160 170 180 190 200 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLV-LSSSQSEE ::::::::::::::::::.:::::::::::::::::::::::::.::::.: :::::::: gi|119 SEKQKEIERVKEKQQKELNKQKQIEKDLEEQSRLIAASSRPNQASSEGQFVVLSSSQSEE 550 560 570 580 590 600 210 220 mKIAA1 SDLGEEGKKRESEA ::::: :::::::: gi|119 SDLGEGGKKRESEA 610 >>gi|114587493|ref|XP_516550.2| PREDICTED: adaptor prote (692 aa) initn: 1321 init1: 1291 opt: 1379 Z-score: 1534.0 bits: 292.7 E(): 9.7e-77 Smith-Waterman score: 1379; 97.321% identity (99.107% similar) in 224 aa overlap (1-223:469-692) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD :::::::::::::::::::::::::::::: gi|114 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGSMEVKSD 440 450 460 470 480 490 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA 500 510 520 530 540 550 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|114 THQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 560 570 580 590 600 610 160 170 180 190 200 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLV-LSSSQSEE ::::::::::::::::::.:::::::::::::::::::::::::.::::.: :::::::: gi|114 SEKQKEIERVKEKQQKELNKQKQIEKDLEEQSRLIAASSRPNQASSEGQFVVLSSSQSEE 620 630 640 650 660 670 210 220 mKIAA1 SDLGEEGKKRESEA ::::: :::::::: gi|114 SDLGEGGKKRESEA 680 690 >>gi|73985226|ref|XP_541832.2| PREDICTED: similar to DCC (665 aa) initn: 1300 init1: 1271 opt: 1377 Z-score: 1532.0 bits: 292.2 E(): 1.3e-76 Smith-Waterman score: 1377; 96.875% identity (99.107% similar) in 224 aa overlap (1-223:442-665) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD ::.::::::::::::::::::::::::::: gi|739 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGGTKSETEDSILHQLFIVRFLGSMEVKSD 420 430 440 450 460 470 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA : :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|739 DSPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQLTRLTFPLPCVVLYA 480 490 500 510 520 530 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 540 550 560 570 580 590 160 170 180 190 200 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLV-LSSSQSEE ::::::.:::::::::::::::::::::::::::::::::::::.::::.: :::::::: gi|739 SEKQKEMERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQASSEGQFVVLSSSQSEE 600 610 620 630 640 650 210 220 mKIAA1 SDLGEEGKKRESEA :::::::::::::: gi|739 SDLGEEGKKRESEA 660 >>gi|73985222|ref|XP_849075.1| PREDICTED: similar to DCC (708 aa) initn: 1300 init1: 1271 opt: 1377 Z-score: 1531.6 bits: 292.3 E(): 1.3e-76 Smith-Waterman score: 1377; 96.875% identity (99.107% similar) in 224 aa overlap (1-223:485-708) 10 20 30 mKIAA1 GGSTKSETEDSILHQLFIVRFLGSMEVKSD ::.::::::::::::::::::::::::::: gi|739 DIISPVCEDQPGQAKAFGQGGRRTNPFGESGGGTKSETEDSILHQLFIVRFLGSMEVKSD 460 470 480 490 500 510 40 50 60 70 80 90 mKIAA1 DHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYA : :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|739 DSPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQLTRLTFPLPCVVLYA 520 530 540 550 560 570 100 110 120 130 140 150 mKIAA1 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 THQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRRA 580 590 600 610 620 630 160 170 180 190 200 mKIAA1 SEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQLV-LSSSQSEE ::::::.:::::::::::::::::::::::::::::::::::::.::::.: :::::::: gi|739 SEKQKEMERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQASSEGQFVVLSSSQSEE 640 650 660 670 680 690 210 220 mKIAA1 SDLGEEGKKRESEA :::::::::::::: gi|739 SDLGEEGKKRESEA 700 223 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 06:01:52 2009 done: Sat Mar 14 06:06:48 2009 Total Scan time: 701.640 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]