FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0969.ptfa, 1106 aa vs ./tmplib.26680 library 1767911 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 11.0064+/-0.00578; mu= -10.9212+/- 0.379 mean_var=345.4102+/-83.135, 0's: 0 Z-trim: 6 B-trim: 8 in 1/35 Lambda= 0.0690 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1686 ( 1205 res) mbg21605 (1205) 533 68 1.3e-11 >>mKIAA1686 ( 1205 res) mbg21605 (1205 aa) initn: 1296 init1: 389 opt: 533 Z-score: 300.7 bits: 67.6 E(): 1.3e-11 Smith-Waterman score: 1382; 29.786% identity (37.425% ungapped) in 1259 aa overlap (7-1086:14-1194) 10 20 30 40 50 mKIAA0 GSALSCHNERRNTFRHPVTGQIPEENKKFDLKTSAL-DMSNKTGGKRSATINS ::::. : .:::::: ..: : .. ... :... .: .. . mKIAA1 EAYTFEGARYYINHNERKVTCKHPVTGQPSQDNCIFVVNDQTVATMTSEDKKERPISMIN 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 DIANHNMVSE--VPPERPNIRATRTSRKAIAFGKRAHSMKRNPNAPVTKAGWLYKQASSG . .:.::.:. : : : :..:.:.:. ::::..:.::::::::.. :::::: :.: mKIAA1 EASNYNMASDYAVHPMSPVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTG 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 VKQWNKRWFVLVDRCLFYYKDEKQESILGSIPLLSFRVAAVQPSDNISRKHTFKVTVHWV .: :.:::::: : :::::.:::.:.::::: : ::..: . :.:.::..:: mKIAA1 MKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTAEDHINRKYAFK------ 130 140 150 160 170 180 190 200 210 220 mKIAA0 DEAGASSTHCLSPQAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQIPPAQK-----SV : : ..:::.: ... .:.: :..:: .:: :: :... : mKIAA1 --------------AAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRV 180 190 200 210 220 230 240 250 260 270 280 mKIAA0 PQPVRHSLEKPDSENIPPSKHHQQPPHNNLTKLEPEAKTRGEGDGRGCEKAERRPERPEV . . : ...::: . .: .: : . .: . . :. : ::: . . mKIAA1 DKITTDSASTKETNNIPNHRVLIRPEVQNHQKNKEISKIE---EKRALE-AERYGFQKDG 230 240 250 260 270 290 300 310 320 330 340 mKIAA0 KKETLVKANGLPSGPETASEPGSPYPDGPRVPGGGEH--PAQPNGWQYSSPSRPGSTAFP . . :.: :.. . : : .:: : . : : . : :: .. .... mKIAA1 QDRPLTKINSVKLNSLL-----SEYESGPDCPPQNVHYRPINVN----SSDGKAVNVSLA 280 290 300 310 320 350 360 370 380 390 400 mKIAA0 PHDGDSGGQRRSFPPRTDPDKIAQRKSSMNQLQQWVNLRRGVPPPEDLRSPSRFYPMPRR : .:.. . : :. :.. :: .::.::.::.....: :. :. . .:: mKIAA1 --DVRGGSHPNAGPLATEADRVIQRTNSMQQLEQWIKVQKGRGLEEEPRGVISYQTLPRN 330 340 350 360 370 380 410 420 430 440 450 mKIAA0 VPDYYNPYSSQYPDDYQYYPPG--VRPDSICSMPA--YDRISPPWALEDKRHSFRNGGGP .:.. .. :. :. : . .::.::::. . ... .: . :.::.:.:. mKIAA1 MPSHRAQILARCPEGYRTLPRNSKTRPESICSVTSSGHEKTGP--GAEEKRRSMRDD--T 390 400 410 420 430 440 460 470 480 490 500 510 mKIAA0 TYQLHEWKESTSYGRQDGTVWIPSPSRQPVFYDELDAASGSLRRLSLQPRSHSVPRSPSQ .::.::.. : .:. .: :. . .. .. ..: : ::.: :::. mKIAA1 MWQLYEWQQRQFYHKQST---LP---RHGCL-----SSPKAMVQVSDQTM-HSIPTSPSH 450 460 470 480 520 530 540 550 mKIAA0 GS------YSRARIY-----SPVRSPSARFDR--LPPRSEDIY-AD----PAAYVM---- :: .: : : ::.. .. .:: : . . .: :: ::. .. mKIAA1 GSAAAYQGFSPQRTYRSEVTSPIQRGDVTIDRRHRPHHPKHVYVADRRSMPAGLTLQAVS 490 500 510 520 530 540 560 mKIAA0 -------------------RRSIS---------------------SPKV----------- ::. . ::: mKIAA1 PQSLQGRTPEELTLLLIKLRRQQAELSSVREHTLAQLMQLKLEAHSPKNEILSHHLQRNT 550 560 570 580 590 600 570 580 mKIAA0 -----------PAY-------------PEVF--------------------RDGLHTFKL : :... : :. .. mKIAA1 IYLDHQMKENEPIITMVHTMIENSALRPQLYQQFLRQKNKISLYCLSQDECRGTLYKYRP 610 620 630 640 650 660 590 600 610 620 630 640 mKIAA0 NEQDTDKLLGKLCEQNKVVREQERLVQQLRAEKESLESALMGTHQELEMFGSQPAYPEKL .: : :..::::.:::: :. .:::. :: .::.::... ::.:: ...:: . . mKIAA1 EEAGIDAKLSRLCEQDKVVRALEEKLQQLHKEKYTLEQALLSASQEIEMNADNPAAIQTV 670 680 690 700 710 720 650 660 670 680 690 mKIAA0 LHKKESLQNQLINIRVELSQATTALTNSTVVYENLESEVSALHDELWEQLNL--DIQNE- . ....::: :.. :::.::. : . :..:: .:.. .:.. ::. ..:.: mKIAA1 VLQRDDLQNGLLSTCRELSRATAELERAWREYDKLEYDVTVTRDQMQGQLDRLGEVQSES 730 740 750 760 770 780 700 710 720 730 740 750 mKIAA0 --VLNRQIQKEIWRIQDVMEGLRKNNPSRGTDTAKHRGGLG-PSATYSSNS-----PASP . :::::.:::::::::: :.. .::.. . :. :. :.:. : : mKIAA1 AGIQRAQIQKELWRIQDVMEGLSKHKQQRGSSETGLAGSKPFSSVKYKSEEEEVVPPRPP 790 800 810 820 830 840 760 770 780 mKIAA0 LS-SASLT--SPLSP------FSMVSGSQGSPTKPGSSE-------PKTG------YETS : : ..: :. : :.. :.: : ... :..: :. mKIAA1 LPRSYDFTEQPPIIPPLPSDSSSLLCYSRGPVHLPEDKKIHQVQGYPRNGSHCGPDYRLY 850 860 870 880 890 900 790 800 810 820 830 840 mKIAA0 KKDPSQTSPLGTPRDINLVPTRQEVEAEKQAALNK-----VGIVPPRTKSPAEEELT-PS :..: :. . : . ..: .: .: . : :: :: :::::. : : : mKIAA1 KSEPELTTV--AEVDESNGEEKSEPVSETEAPVVKGSHFPVG-VPLRTKSPTPESSTIAS 910 920 930 940 950 960 850 860 870 880 890 mKIAA0 AVVRRTTNGLTNGLSSRQERPKSAV----FSGEGKVKMSVEEQMDRMRRHQSGSMKEKRR :. : :. ... : :::.::: .. .. .:.::::..:.::::.. ..::.. mKIAA1 YVTLRKTKKMVE---LRTERPRSAVEQLCLAESARPRMTVEEQLERIRRHQQACLREKKK 970 980 990 1000 1010 1020 900 910 920 930 940 950 mKIAA0 SLQ-LPASPAPEPSTRPAY--KVVRRHRSIHEVDISNLEAALRAEEPGGQAYETPREEIA .:. : :: . : ...:: ...:.: . : .. . :::: . : mKIAA1 GLSVLGASDPSDVRDSPLRLTQTLRRDDNVKELDTVHRENDVKPD------YETPAAQCA 1030 1040 1050 1060 1070 960 970 980 990 1000 1010 mKIAA0 RLRKMELEPQHYDVDISKELSTPDKVLIPERYIDLEPDTPLSPEELKEKQKKVERIKTLI .:. . ::: ..::...:. . . :: :. .. ::. ::... :.... mKIAA1 HLE--DAEPQ--NADIGRKLKRSEMLYTPE------PNG-MASEEVTEKERQKEQVHAD- 1080 1090 1100 1110 1120 1020 1030 1040 1050 1060 1070 mKIAA0 AKSSMQNVVPIGEGDSVDVPQDSESQLQEQEKRIEISCALATEASRRGRMLSVQCATPSP .. : :. . . : . :...:: :.:.:. . :: : : :... .:. .::: mKIAA1 GSCSPQEETAMTEHQMEGPPEEAES-LHEEEETLA-SCEPAPEIPRENQT-TVRSLSPSP 1130 1140 1150 1160 1170 1180 1080 1090 1100 mKIAA0 PTSPAS--PTPPVNPLSSDRPRGADSSHTMRV .: :. :::: mKIAA1 DSSTAADPPTPPQLREGSHFMCV 1190 1200 1106 residues in 1 query sequences 1767911 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:32:56 2006 done: Mon Mar 27 10:32:57 2006 Scan time: 1.060 Display time: 0.130 Function used was FASTA [version 3.4t11 Apr 17, 2002]