# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mib38091.fasta.nr -Q ../query/mKIAA1609.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1609, 274 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920565 sequences Expectation_n fit: rho(ln(x))= 4.6883+/-0.000182; mu= 11.6388+/- 0.010 mean_var=64.0919+/-12.360, 0's: 45 Z-trim: 58 B-trim: 0 in 0/67 Lambda= 0.160204 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|109508213|ref|XP_226525.4| PREDICTED: similar t ( 423) 1127 268.9 1e-69 gi|109129397|ref|XP_001110946.1| PREDICTED: simila ( 501) 986 236.4 7.7e-60 gi|194390318|dbj|BAG61921.1| unnamed protein produ ( 429) 983 235.6 1.1e-59 gi|158255910|dbj|BAF83926.1| unnamed protein produ ( 456) 983 235.6 1.2e-59 gi|205360930|ref|NP_065998.3| hypothetical protein ( 456) 972 233.1 6.7e-59 gi|73957188|ref|XP_546801.2| PREDICTED: similar to ( 511) 971 232.9 8.6e-59 gi|224063717|ref|XP_002196486.1| PREDICTED: hypoth ( 472) 907 218.1 2.3e-54 gi|149640238|ref|XP_001509591.1| PREDICTED: hypoth ( 593) 900 216.5 8.4e-54 gi|47221901|emb|CAF98913.1| unnamed protein produc ( 355) 820 197.9 2.1e-48 gi|116487580|gb|AAI25881.1| Si:ch211-260p9.6 [Dani ( 450) 798 192.9 8.5e-47 gi|126304924|ref|XP_001374960.1| PREDICTED: hypoth ( 493) 774 187.4 4.3e-45 gi|115712087|ref|XP_794130.2| PREDICTED: hypotheti ( 468) 711 172.8 9.9e-41 gi|91087271|ref|XP_975540.1| PREDICTED: similar to ( 461) 683 166.3 8.7e-39 gi|198423339|ref|XP_002125911.1| PREDICTED: simila ( 460) 663 161.7 2.1e-37 gi|190662015|gb|EDV59207.1| GG23536 [Drosophila er ( 447) 633 154.7 2.6e-35 gi|194174153|gb|EDW87764.1| GE18362 [Drosophila ya ( 448) 631 154.3 3.5e-35 gi|194190507|gb|EDX04083.1| GD22498 [Drosophila si ( 448) 628 153.6 5.7e-35 gi|194129940|gb|EDW51983.1| GM13572 [Drosophila se ( 448) 628 153.6 5.7e-35 gi|7297242|gb|AAF52506.1| CG5149, isoform A [Droso ( 448) 628 153.6 5.7e-35 gi|193900350|gb|EDV99216.1| GH13150 [Drosophila gr ( 448) 626 153.1 7.9e-35 gi|54644716|gb|EAL33456.1| GA18692 [Drosophila pse ( 450) 625 152.9 9.2e-35 gi|190616961|gb|EDV32485.1| GF14028 [Drosophila an ( 450) 622 152.2 1.5e-34 gi|193913788|gb|EDW12655.1| GI17790 [Drosophila mo ( 449) 609 149.2 1.2e-33 gi|194149027|gb|EDW64725.1| GJ17615 [Drosophila vi ( 448) 605 148.3 2.3e-33 gi|194162994|gb|EDW77895.1| GK24727 [Drosophila wi ( 450) 605 148.3 2.3e-33 gi|167876258|gb|EDS39641.1| conserved hypothetical ( 472) 596 146.2 1e-32 gi|157015239|gb|EAA12178.3| AGAP007765-PA [Anophel ( 459) 586 143.9 4.9e-32 gi|212513427|gb|EEB16004.1| conserved hypothetical ( 406) 576 141.5 2.2e-31 gi|220901978|gb|ACL83011.1| CG5149, isoform B [Dro ( 384) 573 140.8 3.4e-31 gi|193617825|ref|XP_001947070.1| PREDICTED: simila ( 406) 571 140.4 4.9e-31 gi|108874658|gb|EAT38883.1| conserved hypothetical ( 470) 567 139.5 1e-30 gi|163772284|gb|EDQ85937.1| predicted protein [Mon ( 311) 548 135.0 1.6e-29 gi|194386314|dbj|BAG59721.1| unnamed protein produ ( 124) 496 122.6 3.3e-26 gi|6807804|emb|CAB70693.1| hypothetical protein [H ( 114) 445 110.8 1.1e-22 gi|3878412|emb|CAB01226.1| C. elegans protein K08E ( 399) 431 108.0 2.7e-21 gi|125578565|gb|EAZ19711.1| hypothetical protein O ( 408) 429 107.6 3.7e-21 gi|77553709|gb|ABA96505.1| TLD family protein, exp ( 425) 429 107.6 3.8e-21 gi|219888037|gb|ACL54393.1| unknown [Zea mays] ( 425) 423 106.2 1e-20 gi|158601254|gb|EDP38213.1| TLD family protein [Br ( 394) 418 105.0 2.1e-20 gi|162667524|gb|EDQ54152.1| predicted protein [Phy ( 426) 411 103.4 6.9e-20 gi|9758406|dbj|BAB08948.1| unnamed protein product ( 424) 406 102.3 1.5e-19 gi|223530329|gb|EEF32223.1| conserved hypothetical ( 418) 402 101.3 2.9e-19 gi|187028540|emb|CAP32295.1| Hypothetical protein ( 397) 400 100.8 3.8e-19 gi|147835454|emb|CAN65384.1| hypothetical protein ( 431) 400 100.9 4e-19 gi|157346145|emb|CAO15842.1| unnamed protein produ ( 440) 400 100.9 4.1e-19 gi|222854423|gb|EEE91970.1| predicted protein [Pop ( 422) 397 100.2 6.4e-19 gi|190585427|gb|EDV25495.1| hypothetical protein T ( 123) 350 88.9 4.7e-16 gi|158280049|gb|EDP05808.1| predicted protein [Chl ( 180) 297 76.7 3.1e-12 gi|51535088|dbj|BAD37677.1| nucleolar protein-like ( 368) 294 76.3 8.5e-12 gi|125554587|gb|EAZ00193.1| hypothetical protein O ( 368) 294 76.3 8.5e-12 >>gi|109508213|ref|XP_226525.4| PREDICTED: similar to CG (423 aa) initn: 1148 init1: 1125 opt: 1127 Z-score: 1407.8 bits: 268.9 E(): 1e-69 Smith-Waterman score: 1127; 91.011% identity (94.382% similar) in 178 aa overlap (26-203:237-414) 10 20 30 40 50 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAPEHRQRWRL : .:::::::::::::::: :::: ::: gi|109 FLSVVIHRGLCLLASSFDLSTLVPECHVDGGRPSESILDVLSVIYLSSHLAVEHRQCWRL 210 220 230 240 250 260 60 70 80 90 100 110 mKIAA1 LFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQGDNRCFLFS :::::::::::::::: ::::::::.::::::::::::::::::::::::::::.::::: gi|109 LFSTQLHGQSFSQLCSLITSQGPSLIVLEDRDGYVFGGFASCSWEVKPQFQGDNKCFLFS 270 280 290 300 310 320 120 130 140 150 160 170 mKIAA1 IAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGHSKAKPACT :::::::. :::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IAPRMATYTPTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGHSKAKPACT 330 340 350 360 370 380 180 190 200 210 220 230 mKIAA1 TYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSADGLGTARD ::.:::::::::: :.:::::::::: : gi|109 TYSSPQLSAQEDFQFEKMEVWGLGNLSEKDQVSPTCR 390 400 410 420 >>gi|109129397|ref|XP_001110946.1| PREDICTED: similar to (501 aa) initn: 972 init1: 972 opt: 986 Z-score: 1230.7 bits: 236.4 E(): 7.7e-60 Smith-Waterman score: 986; 67.327% identity (86.139% similar) in 202 aa overlap (21-222:279-480) 10 20 30 40 50 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAPEHR :. :: .::::.:::.:...:: :.: gi|109 PHVAIFLSVVIHKGFLVLCSSLDLTTLVPERQVDQGRGFESILDILSVMYINAHLPREQR 250 260 270 280 290 300 60 70 80 90 100 110 mKIAA1 QRWRLLFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQGDNR . ::::::..:::.::::::.::: .:: . :::::: .:::::::::::::::::::.: gi|109 HCWRLLFSSELHGHSFSQLCGHITHRGPCVAVLEDRDKHVFGGFASCSWEVKPQFQGDDR 310 320 330 340 350 360 120 130 140 150 160 170 mKIAA1 CFLFSIAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGHSKA :::::: : ::.. :::::.:.::::.::::.::::::::::.:::::: .:::::::.: gi|109 CFLFSICPSMAVYTHTGYNDHYMYLNHGQQTIPNGLGMGGQHNYFGLWVDVDFGKGHSRA 370 380 390 400 410 420 180 190 200 210 220 230 mKIAA1 KPACTTYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSADGL ::.:::::::::::::.: :::::::..:. :.. :.. .. :. : gi|109 KPTCTTYNSPQLSAQENFQFDKMEVWAVGDPSEEQLAKSNKSILDADPEAQALLEISGRS 430 440 450 460 470 480 240 250 260 270 mKIAA1 GTARDCGKSPGMRTEIRQPLRALLDGEHPGAGAGLPQGCRAESV gi|109 RHSEGLREIPDDE 490 500 >>gi|194390318|dbj|BAG61921.1| unnamed protein product [ (429 aa) initn: 973 init1: 973 opt: 983 Z-score: 1227.8 bits: 235.6 E(): 1.1e-59 Smith-Waterman score: 983; 67.822% identity (86.139% similar) in 202 aa overlap (21-222:207-408) 10 20 30 40 50 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAPEHR :. :: .::::::::.:....: :.: gi|194 PHVAIFLSVVICKGFLVLCSSLDLTTLVPERQVDQGRGFESILDVLSVMYINAQLPREQR 180 190 200 210 220 230 60 70 80 90 100 110 mKIAA1 QRWRLLFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQGDNR .:::::::..:::.::::::.::: .:: . ::::.: .::::::::::::::::::::: gi|194 HRWRLLFSSELHGHSFSQLCGHITHRGPCVAVLEDHDKHVFGGFASCSWEVKPQFQGDNR 240 250 260 270 280 290 120 130 140 150 160 170 mKIAA1 CFLFSIAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGHSKA :::::: : ::.. :::::.:.::::.::::.::::::::::.:::::: .:::::::.: gi|194 CFLFSICPSMAVYTHTGYNDHYMYLNHGQQTIPNGLGMGGQHNYFGLWVDVDFGKGHSRA 300 310 320 330 340 350 180 190 200 210 220 230 mKIAA1 KPACTTYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSADGL ::.:::::::::::::.: :::::::..:. :.. :. .. :. : gi|194 KPTCTTYNSPQLSAQENFQFDKMEVWAVGDPSEEQLAKGNKSILDADPEAQALLEISGHS 360 370 380 390 400 410 240 250 260 270 mKIAA1 GTARDCGKSPGMRTEIRQPLRALLDGEHPGAGAGLPQGCRAESV gi|194 RHSEGLREVPDDE 420 >>gi|158255910|dbj|BAF83926.1| unnamed protein product [ (456 aa) initn: 973 init1: 973 opt: 983 Z-score: 1227.5 bits: 235.6 E(): 1.2e-59 Smith-Waterman score: 983; 67.822% identity (86.139% similar) in 202 aa overlap (21-222:234-435) 10 20 30 40 50 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAPEHR :. :: .::::::::.:....: :.: gi|158 PHVAIFLSVVICKGFLVLCSSLDLTTLVPERQVDQGRGFESILDVLSVMYINAQLPREQR 210 220 230 240 250 260 60 70 80 90 100 110 mKIAA1 QRWRLLFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQGDNR .:::::::..:::.::::::.::: .:: . ::::.: .::::::::::::::::::::: gi|158 HRWRLLFSSELHGHSFSQLCGHITHRGPCVAVLEDHDKHVFGGFASCSWEVKPQFQGDNR 270 280 290 300 310 320 120 130 140 150 160 170 mKIAA1 CFLFSIAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGHSKA :::::: : ::.. :::::.:.::::.::::.::::::::::.:::::: .:::::::.: gi|158 CFLFSICPSMAVYTHTGYNDHYMYLNHGQQTIPNGLGMGGQHNYFGLWVDVDFGKGHSRA 330 340 350 360 370 380 180 190 200 210 220 230 mKIAA1 KPACTTYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSADGL ::.:::::::::::::.: :::::::..:. :.. :. .. :. : gi|158 KPTCTTYNSPQLSAQENFQFDKMEVWAVGDPSEEQLAKGNKSILDADPEAQALLEISGHS 390 400 410 420 430 440 240 250 260 270 mKIAA1 GTARDCGKSPGMRTEIRQPLRALLDGEHPGAGAGLPQGCRAESV gi|158 RHSEGLREVPDDE 450 >>gi|205360930|ref|NP_065998.3| hypothetical protein LOC (456 aa) initn: 962 init1: 962 opt: 972 Z-score: 1213.7 bits: 233.1 E(): 6.7e-59 Smith-Waterman score: 972; 67.327% identity (85.644% similar) in 202 aa overlap (21-222:234-435) 10 20 30 40 50 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAPEHR :. :: .::::::::.:....: :.: gi|205 PHVAIFLSVVICKGFLILCSSLDLTTLVPERQVDQGRGFESILDVLSVMYINAQLPREQR 210 220 230 240 250 260 60 70 80 90 100 110 mKIAA1 QRWRLLFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQGDNR .:: ::::..:::.::::::.::: .:: . ::::.: .::::::::::::::::::::: gi|205 HRWCLLFSSELHGHSFSQLCGHITHRGPCVAVLEDHDKHVFGGFASCSWEVKPQFQGDNR 270 280 290 300 310 320 120 130 140 150 160 170 mKIAA1 CFLFSIAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGHSKA :::::: : ::.. :::::.:.::::.::::.::::::::::.:::::: .:::::::.: gi|205 CFLFSICPSMAVYTHTGYNDHYMYLNHGQQTIPNGLGMGGQHNYFGLWVDVDFGKGHSRA 330 340 350 360 370 380 180 190 200 210 220 230 mKIAA1 KPACTTYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSADGL ::.:::::::::::::.: :::::::..:. :.. :. .. :. : gi|205 KPTCTTYNSPQLSAQENFQFDKMEVWAVGDPSEEQLAKGNKSILDADPEAQALLEISGHS 390 400 410 420 430 440 240 250 260 270 mKIAA1 GTARDCGKSPGMRTEIRQPLRALLDGEHPGAGAGLPQGCRAESV gi|205 RHSEGLREVPDDE 450 >>gi|73957188|ref|XP_546801.2| PREDICTED: similar to CG5 (511 aa) initn: 978 init1: 951 opt: 971 Z-score: 1211.8 bits: 232.9 E(): 8.6e-59 Smith-Waterman score: 971; 65.829% identity (87.437% similar) in 199 aa overlap (21-219:289-487) 10 20 30 40 50 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAPEHR :. : .:.::.:::::..::: :.: gi|739 VPHVATFLSVVIHRGFLLRLPLDLATLVPERHVDQERVFESVLDILSVIYINSHLPREQR 260 270 280 290 300 310 60 70 80 90 100 110 mKIAA1 QRWRLLFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQGDNR .:::::::..:::.::.:::.:::.::: ....::.::.:::::::::::::::::::. gi|739 HRWRLLFSSKLHGHSFTQLCGHITQQGPCVVLVEDHDGHVFGGFASCSWEVKPQFQGDDT 320 330 340 350 360 370 120 130 140 150 160 170 mKIAA1 CFLFSIAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGHSKA ::::::.::::.. ::::.:.::::. :::.::::::::::.:::::. .::::::::: gi|739 CFLFSISPRMAVYTSTGYNDHYMYLNHRQQTIPNGLGMGGQHNYFGLWIDVDFGKGHSKA 380 390 400 410 420 430 180 190 200 210 220 230 mKIAA1 KPACTTYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSADGL :: ::::.::::::::.: :.::::::.:. ..:.. :. . :. gi|739 KPKCTTYSSPQLSAQENFRFEKMEVWGVGDAPVLQQAKSSRSVLDKNPEAQILLEASGRS 440 450 460 470 480 490 240 250 260 270 mKIAA1 GTARDCGKSPGMRTEIRQPLRALLDGEHPGAGAGLPQGCRAESV gi|739 RHSEGLRDVPDGE 500 510 >>gi|224063717|ref|XP_002196486.1| PREDICTED: hypothetic (472 aa) initn: 874 init1: 874 opt: 907 Z-score: 1132.3 bits: 218.1 E(): 2.3e-54 Smith-Waterman score: 907; 56.422% identity (81.193% similar) in 218 aa overlap (31-248:253-464) 10 20 30 40 50 60 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAPEHRQRWRLLFSTQ :..:. ..::..::: : ...:.::::.. gi|224 LHVLHSLPDQTNDILNLVPHCKGIKGRGVVSLFDIPAIIYINSHLPAEMQHKWQLLFSSR 230 240 250 260 270 280 70 80 90 100 110 120 mKIAA1 LHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQGDNRCFLFSIAPRM :::.::::::.::...:: :....: ::..:::::: ::::::::::::::::::. : . gi|224 LHGESFSQLCAHIVNKGPCLVIIRDLDGFLFGGFASHSWEVKPQFQGDNRCFLFSVFPTL 290 300 310 320 330 340 130 140 150 160 170 180 mKIAA1 ATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGHSKAKPACTTYNSP :.. .::::.:.::::.::::::::::::::: :::::. .:.::::::::: ::::::: gi|224 AVYTYTGYNEHYMYLNHGQQTMPNGLGMGGQHGYFGLWIDSDYGKGHSKAKPRCTTYNSP 350 360 370 380 390 400 190 200 210 220 230 240 mKIAA1 QLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSADGLGTARDCGKSP ::::.::: .: .:::..:. :. . ... :. : . : : .: .: gi|224 QLSAKEDFTLDALEVWAVGDTPESAGRKGKKSILDVDPQAQALLEMA---GKSR---QSE 410 420 430 440 450 250 260 270 mKIAA1 GMRTEIRQPLRALLDGEHPGAGAGLPQGCRAESV :.: ... gi|224 GLREPMEEEEGDDDEN 460 470 >>gi|149640238|ref|XP_001509591.1| PREDICTED: hypothetic (593 aa) initn: 895 init1: 895 opt: 900 Z-score: 1122.3 bits: 216.5 E(): 8.4e-54 Smith-Waterman score: 900; 56.087% identity (77.826% similar) in 230 aa overlap (14-243:365-584) 10 20 30 40 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSS .:. :.. ::. :.::. :. :..: gi|149 FRVPQIGLFLSVVIRHGFHILHPHPEVVNLIPK-CKG---GQGKGFVSVLDLPSITYVNS 340 350 360 370 380 390 50 60 70 80 90 100 mKIAA1 HLAPEHRQRWRLLFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKP :: : ...:.::::.:.::.::::::.::: .:: ..::.: ::.:::::: :::::: gi|149 HLPTEVQHKWKLLFSSQVHGESFSQLCGHITHRGPCVMVLKDSGGYIFGGFASVSWEVKP 400 410 420 430 440 450 110 120 130 140 150 160 mKIAA1 QFQGDNRCFLFSIAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADF :::::..:::::: ::. .. ::::.::::::.::::::::::::::: :::::. .:: gi|149 QFQGDSKCFLFSIYPRIEVYPCTGYNEHFMYLNHGQQTMPNGLGMGGQHDYFGLWIDSDF 460 470 480 490 500 510 170 180 190 200 210 220 mKIAA1 GKGHSKAKPACTTYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVAC :::::.::: :::::::::::.:.: .: .:::..:.: :. . ... :. : gi|149 GKGHSRAKPRCTTYNSPQLSANENFKIDALEVWAVGDLPESEVNKGKKSILDADPEAQAL 520 530 540 550 560 570 230 240 250 260 270 mKIAA1 WRSADGLGTARDCGKSPGMRTEIRQPLRALLDGEHPGAGAGLPQGCRAESV . : .: .: :.: gi|149 L---EMTGKSR---QSEGLREVAEDDDEK 580 590 >>gi|47221901|emb|CAF98913.1| unnamed protein product [T (355 aa) initn: 800 init1: 774 opt: 820 Z-score: 1025.3 bits: 197.9 E(): 2.1e-48 Smith-Waterman score: 820; 49.583% identity (72.917% similar) in 240 aa overlap (18-251:109-343) 10 20 30 40 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAP :: : : .::. .:..:. .: gi|472 SQVSLYLEILVTEGLNVSLSGRPAPDLLPPCRETPWDGLRC---LLDIPTVMFLAPQLPD 80 90 100 110 120 130 50 60 70 80 90 100 mKIAA1 EHRQRWRLLFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQG :::.:::.:::.::... . .. .::.::...: :.::::::: .::.:::::: gi|472 GLAAPWRLVFSTRLHGESFTRMVAGLSRHGPTLLLIKDTKGHVFGGFASHAWELKPQFQG 140 150 160 170 180 190 110 120 130 140 150 160 mKIAA1 DNRCFLFSIAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGH :.:::::...:.. . ::::.:::::: :::::::::::::: :::::. .:::.:: gi|472 DSRCFLFTVSPKLRVFSTTGYNDHFMYLNQHQQTMPNGLGMGGQHDYFGLWLDSDFGRGH 200 210 220 230 240 250 170 180 190 200 210 220 mKIAA1 SKAKPACTTYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSA :.:.:.::::.::::::.::: .:.::::..:. : .: : .:: : .: :. gi|472 SRARPTCTTYGSPQLSAEEDFSLDSMEVWAVGKPPEPEDVRGR-GSW-QKERPGHGSGSS 260 270 280 290 300 310 230 240 250 260 270 mKIAA1 DGLGTARDCGKSPGM-RT-----EIRQPLRALLDGEHPGAGAGLPQGCRAESV : . . .:: :: ..:.: . gi|472 GHYGDDGEVSAQPGTPRTGGGPGRVRKPWKIRKLVCRHRFVS 320 330 340 350 >>gi|116487580|gb|AAI25881.1| Si:ch211-260p9.6 [Danio re (450 aa) initn: 776 init1: 776 opt: 798 Z-score: 996.5 bits: 192.9 E(): 8.5e-47 Smith-Waterman score: 798; 55.612% identity (77.551% similar) in 196 aa overlap (18-213:226-418) 10 20 30 40 mKIAA1 TKAESSREQARWGMPRACRARRWPQGSCPRSILDVLSVIYLSSHLAP :. : . : .:.. ...:: : gi|116 PMMAMFLELLIGEGLGVVLPSRPPPTLLPPCQFAPWTDLRC---VLSLPLLMFLSPLLPE 200 210 220 230 240 250 50 60 70 80 90 100 mKIAA1 EHRQRWRLLFSTQLHGQSFSQLCSHITSQGPSLLVLEDRDGYVFGGFASCSWEVKPQFQG : ::.::::..::.::..: . :.::..:...: :..:::::: :::::::::: gi|116 GHSAPWRMLFSTKMHGESFTRLLGSCKSRGPTVLLVKDTKGHIFGGFASQSWEVKPQFQG 260 270 280 290 300 310 110 120 130 140 150 160 mKIAA1 DNRCFLFSIAPRMATHLHTGYNNHFMYLNYGQQTMPNGLGMGGQHHYFGLWVAADFGKGH :.::::::. : : . ::::.:.:::: ::::::::::::::: :::::. :::.:: gi|116 DSRCFLFSVFPYMRVFTCTGYNDHYMYLNQGQQTMPNGLGMGGQHGYFGLWLDYDFGHGH 320 330 340 350 360 370 170 180 190 200 210 220 mKIAA1 SKAKPACTTYNSPQLSAQEDFLFDKMEVWGLGNLLENMRARTRRASWTQIPKPVACWRSA :.:.: ::::.::::::.::: .: .::::.:.: :... .. : gi|116 SRARPRCTTYGSPQLSADEDFKLDTLEVWGVGKLPEEQEEDEKKKSILDADLEVQAMMEM 380 390 400 410 420 430 230 240 250 260 270 mKIAA1 DGLGTARDCGKSPGMRTEIRQPLRALLDGEHPGAGAGLPQGCRAESV gi|116 TGKTLHSQGLREPEEGED 440 450 274 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 03:09:44 2009 done: Sun Mar 15 03:15:08 2009 Total Scan time: 755.740 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]