FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0772.ptfa, 324 aa vs ./tmplib.26680 library 1768693 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.4166+/-0.00449; mu= 9.7884+/- 0.300 mean_var=103.4948+/-23.977, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.1261 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4220 ( 516 res) mia04077 ( 516) 394 82 8e-17 mKIAA0704 ( 824 res) mbg11653 ( 824) 271 60 6e-10 mKIAA4128 ( 1002 res) mbf00283 (1002) 267 59 1.1e-09 mKIAA1451 ( 429 res) mth01486 ( 429) 258 57 2e-09 mKIAA1534 ( 493 res) mph00515 ( 493) 210 48 9.2e-07 >>mKIAA4220 ( 516 res) mia04077 (516 aa) initn: 577 init1: 244 opt: 394 Z-score: 394.4 bits: 81.9 E(): 8e-17 Smith-Waterman score: 632; 36.765% identity (43.403% ungapped) in 340 aa overlap (1-324:213-516) 10 20 mKIAA0 ELIR-EDLGFRFISEQVSHHPPISAFYSEG :: : :. :.: : :::::::: .: ..:. mKIAA4 CYVAAFTVSSYSTTVFRTSKPFNPLLGETFELDRLEENGYRSICEQVSHHPPAAAHHAES 190 200 210 220 230 240 30 40 50 60 70 80 mKIAA0 LNQDFRFHGSIYPKLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVILGQLWI : . .. : :: :: . : ::: . . .. ::: . : :::.:.:.::: mKIAA4 KN-GWTLRQEIKITSKFRGKYLSIMPLGTIHCIFHSTGHHYTWKKVTTTVHNIIVGKLWI 250 260 270 280 290 300 90 100 110 120 130 140 mKIAA0 EQYGIVEIVNHRTGDKCILHFKPCGLFGKELHR-VEGYIQDKNRKKLFIMYGKWTECLWG .: : ..::::.::::: :.: : . :.... : : : . : . : : . : : : . mKIAA4 DQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTDPSGKVHFALLGTWDEKM-- 310 320 330 340 350 150 160 170 180 190 200 mKIAA0 IDPASYESFKKQEKRGDQARKAKMDDGPEKANSDVPGDVADDVPVAQETVQVIPGSKLLW . :: : :... :.. : : .: : .:: mKIAA4 ------DCFKVQAASGENGGDARQR-GHEAEDSRV----------------------MLW 360 370 380 390 210 220 230 240 250 260 mKIAA0 RINSRPPNSAQMYNFTSFTVSLNELESGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKE . : : :. .:: :. ....:: :.: ::: ::::: : :::: : :. ::. mKIAA4 KRNPLPKNAENMYYFSELALTLNAWEGGTA----PTDSRLRPDQRLMENGRWDEANAEKQ 400 410 420 430 440 270 280 290 300 310 mKIAA0 RLEEKQREARKERAKEDAE----------WRTRWFSPGNNPYTGAPDWLYAGHYFE---- ::::::: .::.: : :. ... :: ..: : .:.:.:.: mKIAA4 RLEEKQRLSRKKREAEAAKATEDGTPHDPYKALWFERKKDPVTRELTHIYSGEYWECKEK 450 460 470 480 490 500 320 mKIAA0 RNFSDCPDIY .....::::. mKIAA4 QDWGSCPDIF 510 >>mKIAA0704 ( 824 res) mbg11653 (824 aa) initn: 451 init1: 190 opt: 271 Z-score: 271.0 bits: 59.8 E(): 6e-10 Smith-Waterman score: 317; 28.270% identity (36.612% ungapped) in 237 aa overlap (21-253:638-824) 10 20 30 40 mKIAA0 ELIREDLGFRFISEQVSHHPPISAFYSEGLNQD--FRFHG-SIYPKLKFW :. . : . :: :.: . .. : ::: mKIAA0 SPLERMVYVAAFAISAYASSYFRAGSKPFNPVLGETYECIRQDKGFQFFAEQMRWKNKFW 610 620 630 640 650 660 50 60 70 80 90 100 mKIAA0 GKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVILGQLWIEQYGIVEIVNHRTGD-KC :::.: : :: . : .. . :.. : :.::.. :: :::.:: ..: : . .: mKIAA0 GKSMEIVPIGTTHVTLPAFGDHFEWNKVTSCIHNILSGQRWIEHYGEIDIKNLNDDSCHC 670 680 690 700 710 720 110 120 130 140 150 160 mKIAA0 ILHFKPCGLFGKELHRVEGYIQDKNRKKLFIMYGKWTECLWGIDPASYESFKKQEKRGDQ ..: .. . :..:: . :.. : . ..::: : .. .: mKIAA0 KVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCGGASS------------- 730 740 750 760 770 170 180 190 200 210 220 mKIAA0 ARKAKMDDGPEKANSDVPGDVADDVPVAQETVQVIPGSKLLWRINSRPPNSAQMYNFTSF : .:: : : . :.:.::.: mKIAA0 -------------------------------------STCVWRANPMPKGYEQYYGFTQF 780 790 230 240 250 260 270 280 mKIAA0 TVSLNELESGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREARKERAKEDA .. :::.. .. ::::: :.::: : mKIAA0 ALELNEMDPLSRSLLPPTDTRFRPDQR 800 810 820 >>mKIAA4128 ( 1002 res) mbf00283 (1002 aa) initn: 586 init1: 240 opt: 267 Z-score: 266.0 bits: 59.1 E(): 1.1e-09 Smith-Waterman score: 566; 35.714% identity (43.568% ungapped) in 294 aa overlap (1-293:725-966) 10 20 30 mKIAA0 ELIREDLGFRFISEQVSHHPPISAFYSEGL : :::: ::::.:::::::::::: . : mKIAA4 LVAAFAVSGYCSTYFRAGSKPFNPVLGETYECIREDKGFRFFSEQVSHHPPISACHCE-- 700 710 720 730 740 750 40 50 60 70 80 90 mKIAA0 NQDFRFHGSIYPKLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVILGQLWIE ...: : .: : ::::::.: : ::... : :... :.:.. : :.::.. :. ::: mKIAA4 SKNFVFWQDIRWKNKFWGKSMEILPVGTLNVTLPKYGDYYVWNKVTTCIHNILSGRRWIE 760 770 780 790 800 810 100 110 120 130 140 mKIAA0 QYGIVEIVNHRTGDK-CILHFKPCGLFGKELHRVEGYIQDKNRKKLFIMYGKWTECLWGI .:: : . : ... : : : . .......:.: . :.. : . ..::: : :. mKIAA4 HYGEVTLRNTKSSVCICKLTFVKVNYWNSNVNEVQGVVIDQEGKVVHRLFGKWHEGLY-- 820 830 840 850 860 870 150 160 170 180 190 200 mKIAA0 DPASYESFKKQEKRGDQARKAKMDDGPEKANSDVPGDVADDVPVAQETVQVIPGSKLLWR : :..: .:: mKIAA4 ------------------------------------------------CGVAPSAKCIWR 880 210 220 230 240 250 260 mKIAA0 INSRPPNSAQMYNFTSFTVSLNELESGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKER .: : : .:.:: :.: ::::. .. ::::: :.::: : .:.::.. :. ::.: mKIAA4 PGSLPTNYELYYGFTRFAVELNELDPVLKDLLPPTDARFRPDQRFLEEGNLEAAAAEKQR 890 900 910 920 930 940 270 280 290 300 310 320 mKIAA0 LEEKQREARKERAKEDAEWRTRWFSPGNNPYTGAPDWLYAGHYFERNFSDCPDIY .:: :: :. ... : ..:. mKIAA4 VEELQRSRRRYMEENNLEHIPKFFKKVIDANQREAWVSNDTYWELRKDPGFSKVDSPVLW 950 960 970 980 990 1000 >>mKIAA1451 ( 429 res) mth01486 (429 aa) initn: 315 init1: 245 opt: 258 Z-score: 261.7 bits: 57.1 E(): 2e-09 Smith-Waterman score: 261; 26.667% identity (34.043% ungapped) in 300 aa overlap (11-308:47-283) 10 20 30 40 mKIAA0 ELIREDLGFRFISEQVSHHPPISAFYSEGLNQDFRFHGSI .:.::::::::::::: . .. : . ::: mKIAA1 PKGLKKPYNPILGETFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCLSGSI 20 30 40 50 60 70 50 60 70 80 90 100 mKIAA0 YPKLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVILGQLWIEQYGIVEIVNH : ::.:.:. : .: : .:...: :. : : .... : . .: : :.:. . mKIAA1 LAKSKFYGNSLSAILEGEARLTFLNRGEDYVMTMPYAHCKGILYGTMTLELGGTVNITCQ 80 90 100 110 120 130 110 120 130 140 150 mKIAA0 RTGDKCILHFKPCGLFGKE--LHRVEGYIQDKNRKKLFIMYGKWTECLWGIDPASYESFK .:: . ::.:: ..:. .... : .. ... : . :.: : : mKIAA1 KTGYSAILEFKLKPFLGSSDYVNQISGKLK-LGKEVLATLEGHWDS----------EVFI 140 150 160 170 180 160 170 180 190 200 210 mKIAA0 KQEKRGDQARKAKMDDGPEKANSDVPGDVADDVPVAQETVQVIPGSKLLWRINSRPPNSA . .:. : ::.. . . :. ::. . . mKIAA1 N-DKKTD--------------NSEIFWNPTPDIK--------------QWRLIRHTVKFE 190 200 210 220 230 240 250 260 270 mKIAA0 QMYNFTSFTVSLNELESGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREAR .. .: : ..: . . :.. : . :.::: ::: ::.: mKIAA1 EQDDFES-----EKLWQRVTKAINAKD--------------QTEATQEKYVLEEAQRQAA 220 230 240 250 280 290 300 310 320 mKIAA0 KERAKEDAEWRTRWFSPGNNPYTGAPDWLYAGHYFERNFSDCPDIY ..: . :: . : .: :: .: : mKIAA1 RDRKTKTQEWVCKLFEL--DPLTG--EWHYKFSDTRPWDPLNDMIQFEKDGVIQTKVKHR 260 270 280 290 300 310 >>mKIAA1534 ( 493 res) mph00515 (493 aa) initn: 215 init1: 176 opt: 210 Z-score: 213.8 bits: 48.4 E(): 9.2e-07 Smith-Waterman score: 210; 40.230% identity (40.230% ungapped) in 87 aa overlap (11-97:139-225) 10 20 30 40 mKIAA0 ELIREDLGFRFISEQVSHHPPISAFYSEGLNQDFRFHGSI .:.::::::::.:::: . .. : . ::: mKIAA1 PKGIKKPYNPILGETFRCRWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMSGSI 110 120 130 140 150 160 50 60 70 80 90 100 mKIAA0 YPKLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVILGQLWIEQYGIVEIVNH : ::.:.:. : : : .:...: :: : : .... : . .: : :.. mKIAA1 TAKSKFYGNSLSALLDGKAKLTFLNRKEEYTLTMPYAHCRGILYGTMTMELGGKVDVFIK 170 180 190 200 210 220 110 120 130 140 150 160 mKIAA0 RTGDKCILHFKPCGLFGKELHRVEGYIQDKNRKKLFIMYGKWTECLWGIDPASYESFKKQ mKIAA1 EESSGGTELFWTPSEEVRRQRLKRHTVLLEEQSELESERLWQHVTRAIREGDQHKATQEK 230 240 250 260 270 280 324 residues in 1 query sequences 1768693 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:28:20 2006 done: Mon Mar 27 10:28:21 2006 Scan time: 0.540 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]