FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1594.ptfa, 907 aa vs ./tmplib.26680 library 1768110 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.6727+/-0.00587; mu= 15.2879+/- 0.391 mean_var=158.3283+/-37.061, 0's: 0 Z-trim: 11 B-trim: 151 in 1/35 Lambda= 0.1019 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0891 ( 1362 res) mfj56010 (1362) 231 47 2.2e-05 mKIAA4155 ( 747 res) mfj33105 ( 747) 218 44 5.9e-05 mKIAA0529 ( 955 res) mbh01226 ( 955) 210 43 0.00015 mKIAA4085 ( 512 res) mbh02992 ( 512) 205 42 0.00018 mKIAA1891 ( 1086 res) mbh02730 (1086) 183 40 0.0026 >>mKIAA0891 ( 1362 res) mfj56010 (1362 aa) initn: 309 init1: 127 opt: 231 Z-score: 188.9 bits: 46.8 E(): 2.2e-05 Smith-Waterman score: 231; 29.688% identity (33.333% ungapped) in 192 aa overlap (292-467:579-765) 270 280 290 300 310 mKIAA1 LSVKKLRCNQDYAGWNRPRVPLSSHQQQLQGFSNLGNTCYMNAILQSLFS---LQSFAND :. ::::::.::...::: . :..: .: mKIAA0 VPPMPHSPVSGDSVEEDEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHD 550 560 570 580 590 600 320 330 340 350 360 370 mKIAA1 L-LKQSIPWKKIPFNA---LIRRFANLLIKKDICNSETKKELLKKVKNAISATAERFSGY .. : ... :... : :: :: . . .. . .:.: ... : .:.:: mKIAA0 RSFEAEINYNN-PLGTGGRLAIGFAVLL--RALWKGTHQAFQPSKLKAIVASKASQFTGY 610 620 630 640 650 660 380 390 400 410 420 mKIAA1 VQNDAHEFLSQCLDQLKEDMEKLNKTWKTEPVLGEENLPDTSAT-------KVFTCPVIT .:.::.::.. :: :.::...... :: : .. :: .. :. . :. mKIAA0 AQHDAQEFMAFLLDGLHEDLNRIQNKPYTETV-DSDGRPDEVVAEEAWQRHKMRNDSFIV 670 680 690 700 710 720 430 440 450 460 470 480 mKIAA1 NLEFEVQHS--IICKACGETIPKREQFNDLSIDLPRRKKPLPPRSIQDSLDLFFRAEELE .: :. :.. ..: .:... . : : . ::...: :: mKIAA0 DL-FQGQYKSKLVCPVCAKVSITFDPFLYLPVPLPQKQKVLPIFYFAREPHSKPIKFLVS 730 740 750 760 770 780 490 500 510 520 530 540 mKIAA1 YSCEKCGGKCALVRHKFNRLPRVLILHLKRYSFNVALSLNNKLGQQVIIPRFLTLASHCT mKIAA0 VSKENSSASEVLDSLSQSVHVKPENLRLAEVIKNRFHRVFLPSHSLDAVSPTDVLLCFEL 790 800 810 820 830 840 >>mKIAA4155 ( 747 res) mfj33105 (747 aa) initn: 225 init1: 111 opt: 218 Z-score: 181.3 bits: 44.5 E(): 5.9e-05 Smith-Waterman score: 233; 22.551% identity (26.407% ungapped) in 541 aa overlap (169-659:187-698) 140 150 160 170 180 190 mKIAA1 TLTSTPLRSGLLENRTEKRKRMLSGSELTEDYPKENDSSSNNKAMTDPSR---KYLTSCR . : : .. :: :.. . : .. . mKIAA4 ENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQ 160 170 180 190 200 210 200 210 220 230 240 250 mKIAA1 EKQLSLKQA---EENRTSGLLPLQSSSFYGSRAGSKDY--SSGVTNLDRCNVSSQTPSAK . : :. : . .: : :: . .: : :... :: . :.::.. . mKIAA4 DAGLYQGQVLVIEPQNEDGTWPRQSLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANG 220 230 240 250 260 270 260 270 280 290 300 mKIAA1 RSLGFLPQPTPLSVKKLRCNQDYAGWNRPRVPLSSH-QQQLQGFSNLGNTCYMNAILQSL : . . . .:. : .. ... . : : : : : :..::::::.::. :: : mKIAA4 DSTNSSGMHSS-GVS--RGGSGFSASYNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCL 280 290 300 310 320 330 310 320 330 340 350 360 mKIAA1 FSLQSFANDLLKQSIPWKKIPFNALIRRFANLLIKKDICNSETKKELLKKV--------- . ... .::. ..: : : : .: .: .:. ::.:.. mKIAA4 SNTAPLTEYFLKDE-------YEAEINRDNPLGMKGEI--AEAYAELIKQMWSGRDTHVA 340 350 360 370 380 370 380 390 400 410 mKIAA1 ----KNAISATAERFSGYVQNDAHEFLSQCLDQLKEDMEKLNKTWKTEPVLGEENLPDTS :. .. : .:::: :.:..:.:. :: :.::.....: :: .. ::. mKIAA4 PRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPK-DANGRPDAV 390 400 410 420 430 440 420 430 440 450 460 mKIAA1 ATKVF--------TCPVITNLEFEVQHSIICKACGETIPKREQFNDLSIDLPRRKK---- ..: .. ... . ...: :... . : :.. :: .: mKIAA4 VAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRIME 450 460 470 480 490 500 470 480 490 500 510 mKIAA1 ----PLPP--RSIQDSLDLFFRAEELEYSCEKCGGKCALVRHKFNRLPRVLILHLKRYSF : : : :: . . . . . :: :: . . ... . . : mKIAA4 VFLVPADPQCRPIQYRVTVPLMGA-ISDLCE------ALSKLSGIAAENMVVTDVYNHRF 510 520 530 540 550 520 530 540 550 560 570 mKIAA1 NVALSLNNKLGQQVIIPR---FLTLASHCTESTKPPVTLGWSAPVAMKFTFKSKSSVTSC . ..... :.. : :: :. . . . . . .:: :: .. . ::..: mKIAA4 HKIFQMDEGLSH--ITPRDDIFVYEVCNTSMDGSECITL----PVYFREKKSRPSSASSG 560 570 580 590 600 610 580 590 600 610 620 mKIAA1 LDSDSEDEL----KRSVVLS---QRLCDLPGNEQYQEDVEKDLKLCRLEPGKAELENSGF .. : :....: : .:: .. .. . .. :::: . :.. mKIAA4 AVLYGQPLLVSVPKHKLTLESLYQAVCDRI-SRYIKQPLPDEFLSSPLEPGACNGSRSSY 620 630 640 650 660 630 640 650 660 670 680 mKIAA1 DRMSEEEVLAAVLEISRREASPVLSPEDDDKPTSSPDTGFAEDDIPEMPENPDAMEIEKS . :::. : .... : : . .::. mKIAA4 EGDEEEEMDHQ--EEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFTFSLVNSC 670 680 690 700 710 720 690 700 710 720 730 740 mKIAA1 KTITEPGPASFTEITKDCDENKENKTPEGSQGEVDWLQQYDVDREREEQELQQALAQSLQ mKIAA4 GTADINSLATDGKLLKLNCL 730 740 >>mKIAA0529 ( 955 res) mbh01226 (955 aa) initn: 284 init1: 102 opt: 210 Z-score: 173.8 bits: 43.5 E(): 0.00015 Smith-Waterman score: 248; 20.278% identity (24.374% ungapped) in 720 aa overlap (246-882:229-910) 220 230 240 250 260 270 mKIAA1 QSSSFYGSRAGSKDYSSGVTNLDRCNVSSQTPSAKRSLGFLPQPTPLSVKKLRCNQDYAG ::..: : ::. : . : ::. mKIAA0 STIQDAGLYQGQVLVIEQKNEDGTWPRGPSTPNVKNSNYCLPSYTAYK------NYDYSE 200 210 220 230 240 250 280 290 300 310 320 330 mKIAA1 WNRPRVPLSSHQQQLQGFSNLGNTCYMNAILQSLFSL----QSFANDLLKQSIPWKKIPF .: ...: : :.:::::::.::. .: : . . : :: .. . . . :. mKIAA0 PGR-----NNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDN-PL 260 270 280 290 300 340 350 360 370 380 mKIAA1 N---ALIRRFANLLIKKDICNSETKKELLKKVKNAISATAERFSGYVQNDAHEFLSQCLD . . . .:.:. :.. ... . . :. .. : .:::: :.: .:.:. :: mKIAA0 GMRGEIAKSYAELI--KQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 310 320 330 340 350 360 390 400 410 420 430 mKIAA1 QLKEDMEKLNKT---------WKTEPVLGEENLPDTSATKVFTCPVITNLEFEVQHSIIC :.::.... : . . :..:: . : .. .. . ...: mKIAA0 GLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENH--LKRNDSIIVDIFHGLFKSTLVC 370 380 390 400 410 420 440 450 460 470 480 490 mKIAA1 KACGETIPKREQFNDLSIDLPRRKKPLPPRSIQDSL---DLFFRAEELEYSCEKCGGKCA :.. . : :.. :: .:. ::.. : : . . . . : :. mKIAA0 PECAKISVTFDPFCYLTLPLPMKKE----RSLEVYLVRMDPLAKPMQYKVIVPKIGNILD 430 440 450 460 470 500 510 520 530 540 mKIAA1 LVR--HKFNRLP--RVLILHLKRYSFNVALSLNNKLGQQVIIPR----FLTLASHCTEST : .. .: .... . . :. ......:.. :. : . . . .:.: mKIAA0 LCTALSALSGVPADKMIVTDIYNHRFHRIFAVDENLSS--IMERDDIYVFEININRAEDT 480 490 500 510 520 530 550 560 570 580 590 mKIAA1 KPPVTLGWSAPVAMKFTFKSKSSVTSCLDS-------------DSEDELKRSVVLSQRLC . : :: .. :. .: . .: ..::.: ..: :.: mKIAA0 EHVVI-----PVCLREKFRHSSYTHHTGSSLFGQPFLMAIPRNNTEDKLYNLLLL--RMC 540 550 560 570 580 600 610 620 630 640 650 mKIAA1 DLPGNEQYQEDVEKDLKLCRLEP----GKAELENSGFDRMSEEEVLAAVLEISRREASPV :... :. :. . : :.. : :: :. : :. . : mKIAA0 RYVKMSTETEETDGHLRCCEDQNINGNGPNGLHEEGSP--SEMETDEPDDESSQDQELPS 590 600 610 620 630 640 660 670 680 690 700 mKIAA1 LSPEDDDKPTSSPDTGFAEDDIPEMPENPDAMEIEKSKTITEP----GPASFTEITKDCD . ..... . . :. .:. . . .:.. .: : ... : : . mKIAA0 ENENSQSEDSVGGDND-SENGLCTEETCKGQLTGHKKRLFTFQFNNLGNNDINYIKDDTS 650 660 670 680 690 700 710 720 730 740 mKIAA1 ----ENKENKTPEGSQGEVDW---LQQ--YDV----DREREEQ-----------ELQQAL .... . : : .:: :.. .: : :..:. .:.. . mKIAA0 HIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEYKPPKRPFVKLKDCI 710 720 730 740 750 760 750 760 770 780 790 mKIAA1 -----AQSLQEQEAW---EQKEDDDLKRATEL-SLQEFNNSFLDSLGSDEDSGN--EDVF ..: .. : . :: .. . .: :: : .. .. . . . mKIAA0 ELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLV 770 780 790 800 810 820 800 810 820 830 840 850 mKIAA1 DMEYTEAEAEELKRNAETGALPHSYRLISVVSHIGSTSSSGHYISDVYDIKKQAWFTYND :. .. . :. : ..: : : ::.: .: :. .. ::: . . . :. ..: mKIAA0 DFPISDLDMSEFLINPNAG--PCRYNLIAVSNHYGGMGG-GHYTAFAKNKDDGKWYYFDD 830 840 850 860 870 880 860 870 880 890 900 mKIAA1 LEVSKIQEAAVQSDRDRSGYIFFYMHKEIFDELLETEKTSQALSMEVGRAARQAS :: .: . : ...:..::.... :. mKIAA0 SSVSTASEDQIVS---KAAYVLFYQRQDTFSGTGFFPLDRETKGASAATGIPLESDEDSN 890 900 910 920 930 940 >>mKIAA4085 ( 512 res) mbh02992 (512 aa) initn: 222 init1: 107 opt: 205 Z-score: 172.6 bits: 42.4 E(): 0.00018 Smith-Waterman score: 206; 24.650% identity (29.333% ungapped) in 357 aa overlap (148-469:44-378) 120 130 140 150 160 170 mKIAA1 RGPIKTVTGGGMAVTRTIPSLTLTSTPLRSGLLENRT--EKRKRMLSGSELTEDYPKE-- ::.... :.. : : . .: :: : mKIAA4 ISWHLRERLLEGDDYVLLPAPAWNYMVSWYGLMDGQPPIERKVIELPGIRKVEVYPLELL 20 30 40 50 60 70 180 190 200 210 220 230 mKIAA1 -NDSSSNNKAMTDPSRKYLTSCREKQLSLKQAEENRTSGLLPLQSSSFYGSRA-GSKDY- . :. . :.: . .: : .: :. :.:. . : ... .. . . :: : mKIAA4 LVQHSDMETALT-IQFSYTDSV---ELVLQTAREQFL--VEPQEDTRLWTKNSEGSLDRL 80 90 100 110 120 240 250 260 270 280 mKIAA1 -SSGVTNLDRCNVSSQTP--SAKRSLGFLPQPTPLSVKKL-RCNQDYAGWNRPRVPLSSH .. .: :: : ..: .. . : :. ..... ..:. : mKIAA4 CNTQITLLDACLETGQLVIMETRNKDGTWPSAQLCGMNNIPDEDEDFQG----------- 130 140 150 160 170 290 300 310 320 330 mKIAA1 QQQLQGFSNLGNTCYMNAILQSLFSL----QSFANDLLKQSIPWKKIPFN---ALIRRFA : . :..::::::.::. :: : .. . : :. . . ... :.. : . .: mKIAA4 QPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRN-PLGMKGELAEAYA 180 190 200 210 220 230 340 350 360 370 380 390 mKIAA1 NLLIKKDICNSETKKELLKKV-KNAISATAERFSGYVQNDAHEFLSQCLDQLKEDMEKLN .: .:. : .. .. .: :: .. : .: :: :.:..:.:: :: :.::..... mKIAA4 DL-VKQTW--SGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVK 240 250 260 270 280 290 400 410 420 430 440 450 mKIAA1 KTWKTEPVLGEENLPDTS-ATKVFTCP-------VITNLEFEVQHSIICKACGETIPKRE : .: : . :: : ... .. ... . ...: ::.. . mKIAA4 KKEYVELCNGA-GRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFD 300 310 320 330 340 350 460 470 480 490 500 mKIAA1 QFNDLSIDLP---RRK-----KPLPPRSIQDSLDLFFRAEELEYSCEKCGGKCALVRHKF : ::. :: :: :. :: mKIAA4 PFCYLSVPLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK 360 370 380 390 400 410 >>mKIAA1891 ( 1086 res) mbh02730 (1086 aa) initn: 241 init1: 110 opt: 183 Z-score: 151.8 bits: 39.6 E(): 0.0026 Smith-Waterman score: 183; 28.049% identity (33.014% ungapped) in 246 aa overlap (256-477:449-681) 230 240 250 260 270 280 mKIAA1 GSKDYSSGVTNLDRCNVSSQTPSAKRSLGFLPQPTPLSVKKLRCNQDYAGWNRPRVPLSS .:.:. ..: : :: ..:. :.: mKIAA1 VQLTELVHCMMYHYSGFPDLYEPILEAVKDFPKPSEEKIK-LILNQ--SAWTSQSNALAS 420 430 440 450 460 470 290 300 310 320 330 mKIAA1 HQQQLQGFS--------NLGNTCYMNAILQSLFSLQSFANDLLKQSIPWKKIPFNALIRR ..:.: : :::::::::..::.:: .:... .: . . :.:... mKIAA1 CLSRLSGKSETGKTGLINLGNTCYMNSVLQALF----MATEFRRQVLSLNLNGCNSLMKK 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA1 FANLLIKKDICNSETKKELLKKVKNAISATAERFSGYVQNDAHEFLSQCLDQLKEDMEKL . .:. ..:..: .. :. :.: :.: ::.:.:. . : mKIAA1 LQHLFA----FLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKIL 540 550 560 570 580 400 410 420 430 440 mKIAA1 NKTWKTEPVLG----EENLPD-TSATKVFT-CPVITNLE-------F--EVQHSIICKAC . .: : : : . :: . : : : . : : ... : : : mKIAA1 RVQSSHKPSEGLDCAETCLQEVTSKVAVPTESPGTGDSEKTLIEKMFGGKLRTHICCLNC 590 600 610 620 630 640 450 460 470 480 490 500 mKIAA1 GETIPKREQFNDLSIDL-PRRKKPLPPRSIQDSLDLFFRAEELEYSCEKCGGKCALVRHK : : : : :.:::. . : . . :.::. .: mKIAA1 GSTSHKVEAFTDLSLAFCP--SPSVEDLSFQDTASLPSAQDDGLMQTSVADPEEEPVVYN 650 660 670 680 690 700 510 520 530 540 550 560 mKIAA1 FNRLPRVLILHLKRYSFNVALSLNNKLGQQVIIPRFLTLASHCTESTKPPVTLGWSAPVA mKIAA1 PATAAFVCDSVVNQRVLGSPPVEFHCAESSSVPEESARILISKDVPQNPGGESTTSVTDL 710 720 730 740 750 760 907 residues in 1 query sequences 1768110 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:49:04 2006 done: Mon Mar 27 10:49:06 2006 Scan time: 1.020 Display time: 0.200 Function used was FASTA [version 3.4t11 Apr 17, 2002]