FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00271.ptfa, 494 aa vs ./tmplib.26680 library 1768523 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.9021+/-0.00473; mu= 9.5851+/- 0.316 mean_var=111.3293+/-25.755, 0's: 0 Z-trim: 2 B-trim: 0 in 0/36 Lambda= 0.1216 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1436 ( 812 res) mbg18759 ( 812) 495 98 3.5e-21 mKIAA0466 ( 1214 res) mpm03293 (1214) 431 87 1.1e-17 >>mKIAA1436 ( 812 res) mbg18759 (812 aa) initn: 730 init1: 292 opt: 495 Z-score: 472.6 bits: 97.6 E(): 3.5e-21 Smith-Waterman score: 606; 28.788% identity (31.742% ungapped) in 462 aa overlap (2-452:46-475) 10 20 30 mFLJ00 QDSGFYECYTPSTDTQYLGNYSAKVELRVLP :.: :.: :::::. ::: :...:: mKIAA1 YRERLQRGDILLRRTANDAVELHIKNVQPSDQGHYKCSTPSTDATVQGNYEDTVQVKVLA 20 30 40 50 60 70 40 50 60 70 80 90 mFLJ00 DELQVSAAPPGPRGRQAATSPSRLTVHEGQELALGCLAQTKTKKHTHLSVSFGRAIPEAP : : : :: .: : :...::. . : :.:.: . ::::.. . . ..: mKIAA1 DALVV-----GPSSRP----PPGLSLREGEPFELRCIASTTSPLHTHLALRW--ELHRGP 80 90 100 110 120 100 110 120 130 140 150 mFLJ00 VGRATLQEVVGLHSDMAVEAGAPYAERLASGELRLSKEGTDRYRMVVGGAQAGDSGTYHC : :. ...: . . : : .: ::..::. :.: ::. :. : ..:.:.:.: mKIAA1 VHRS----ILALSHEGRFHPGPGYEQRYHSGDVRLDTVGSDAYRLSVARALSADQGSYRC 130 140 150 160 170 180 160 170 180 190 200 210 mFLJ00 TAAEWIQDPDGSWVQVAEKRAVLAHVDVQTLSSQLAVTVGPGERRIGPGEPLELLCNVSG ...::: . .::: .. :: . .: : .: . :::: : . :. :.: ::.. mKIAA1 VVSEWITE-QGSWQEIQEKAVEVATVVIQPTALQLAV---PRTVSVTEGKDLDLSCNITT 190 200 210 220 230 220 230 240 250 260 mFLJ00 ALPPPGRHAAYSVGW--EMAPAGAPGPGRLVAQLDTEGIGSLGPGYEDRHIAMEKVASRT : : : . .: . ....:.:: ... .: :.:. .: .:. mKIAA1 DRVDDVRPE---VTWYFKKTPDTSLLASHMLARLDRDSLVHSSP-----HVALSHVDTRS 240 250 260 270 280 270 280 290 300 310 320 mFLJ00 YRLRLEAARPADAGTYRCLAKAYVRGSGTRLREAASARSRPLPVHVR----EEGVVLEAV :.: .. . ..: : ::. .. : . ...: : : : : : : : :.: mKIAA1 YHLLVRDVSKENSGYYLCLVALWAPGHNRSWHKVAEAMSAPSGVSVTWLEPEYQVYLNA- 290 300 310 320 330 340 330 340 350 360 370 380 mFLJ00 AWLAGGTVYRGETASLLCN-ISVRGGPPGLRLAASWWVERPEEGELSTGPAQLVGGVGQD . . : . . . : : :... :.::..::. . .... .. ..:.. . : mKIAA1 SKVPG---FSDDPTELQCRVIDTKRLEAGVRLTVSWYYRMTRRND-DVVASELLAVMDGD 350 360 370 380 390 400 390 400 410 420 430 440 mFLJ00 GVAELGVRPGGGPVSVELVGPRSHR----LRLHGLGPEDEGIYHCAPSAWVQHADYSWYQ . . : : . :.. . : .:.. ::.: :.:. :::... . :: . mKIAA1 WTLRYGERSKQRAQDGEFIFSKEHTDTFNFRIQRTTEEDRGNYYCVVSAWTRQRNNSWVK 410 420 430 440 450 460 450 460 470 480 490 mFLJ00 AGSARSGPVTVYPYTHAVDTLFVPLLVGTGVALVTGASVLATITCCFMKRMRKR . .. : ::... mKIAA1 SKDVFSKPVNIFWASEDSVLVVKARQPKPFFAAGNTFEMTCKVSSKNIKSPRYSVLITAE 470 480 490 500 510 520 >>mKIAA0466 ( 1214 res) mpm03293 (1214 aa) initn: 559 init1: 292 opt: 431 Z-score: 409.7 bits: 86.6 E(): 1.1e-17 Smith-Waterman score: 646; 30.921% identity (34.390% ungapped) in 456 aa overlap (1-446:133-552) 10 20 30 mFLJ00 QDSGFYECYTPSTDTQYLGNYSAKVELRVL .:.: :::.::.:: .:.:.::::..: :. mKIAA0 IYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYECHTPNTDERYFGSYSAKMNLVVI 110 120 130 140 150 160 40 50 60 70 80 mFLJ00 PDELQVSAAPPGPRGRQAATSPSRLTVH--EGQELALGCLAQTKTKKHTHLSVSFGRAIP :: ::..:.: :.: : . : :.: . :.: .:::::::. : mKIAA0 PDSLQTTAVPQ--------------TLHKVEQDPLELSCEVATETVQHTHLSVSWLRQKG 170 180 190 200 90 100 110 120 130 140 mFLJ00 -EAPVGRATLQEVVGLHSDMAVEAGAPYAERLASGELRLSKEGTDRYRMVVGGAQAGDSG : :: ::..: :. ..... ::.: . ::.::.: : . .:... : .:.: mKIAA0 GENPV------EVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSDQG 210 220 230 240 250 260 150 160 170 180 190 200 mFLJ00 TYHCTAAEWIQDPDGSWVQVAEKRAVLAHVDVQTLSSQLAVTVGPGERRIGPGEPLELLC ..: :::::::::::: ...::. : :.:: .....: . .: :::.:. : mKIAA0 EFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEFRC 270 280 290 300 310 320 210 220 230 240 250 260 mFLJ00 NVSGALPPPGRHAAYSVGWEMAPAGAPGPGRLVAQLDTEGIGSLGPGYEDRHIAME-KVA . : : :. ..:.: . . :.: . ... :. . :. . ::: mKIAA0 -ILEAQNIPDRY--FAVSWAFNSS-------LIATMGPNAVPVLNSDFAHREAKGQLKVA 330 340 350 360 370 270 280 290 300 310 320 mFLJ00 SRT---YRLRLEAARPADAGTYRCLAKAYVRGSGTRLREAASARSRPLPVHV--REEGVV ... . :.. : :.: : : . . .. . : : . .:. : . .. mKIAA0 KESDGVFVLKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLKSSIS 380 390 400 410 420 430 330 340 350 360 370 380 mFLJ00 LEAVAWLAGGTVYRGETASLLCNISVRGGPPGLRLAASWW-VERPEEGELSTGPAQLVGG .:... ...: .:: . :.. . : . :... : :.: ... :. : mKIAA0 VEVAS--NASVVLEGEDLHFSCTVRTVGRLQA-RFSVIWQLVDR--QNRRSNVMWLDRDG 440 450 460 470 480 390 400 410 420 430 440 mFLJ00 VGQDGVAELGVRPGGGPVSVELVGPRSHRLRLHGLGPEDEGIYHCAPSAWVQHADYSWYQ . : : : : . : ...: : : : : . . :::: :.: . ::. .: : mKIAA0 TLQPGSAYWE-RSSYGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQI 490 500 510 520 530 540 450 460 470 480 490 mFLJ00 AGSARSGPVTVYPYTHAVDTLFVPLLVGTGVALVTGASVLATITCCFMKRMRKR .: :.. mKIAA0 VGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQP 550 560 570 580 590 600 494 residues in 1 query sequences 1768523 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:08:52 2006 done: Mon Mar 27 10:08:53 2006 Scan time: 0.680 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]