# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mia37082.fasta.nr -Q ../query/mKIAA4017.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4017, 340 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916048 sequences Expectation_n fit: rho(ln(x))= 5.5296+/-0.000196; mu= 9.3956+/- 0.011 mean_var=100.0953+/-19.341, 0's: 42 Z-trim: 45 B-trim: 453 in 2/66 Lambda= 0.128194 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148705474|gb|EDL37421.1| RIKEN cDNA 2410018C17, ( 421) 2266 429.1 7.5e-118 gi|148705473|gb|EDL37420.1| RIKEN cDNA 2410018C17, ( 503) 2239 424.2 2.7e-116 gi|20306526|gb|AAH28656.1| RIKEN cDNA 2410018C17 g ( 402) 2118 401.7 1.3e-109 gi|16741584|gb|AAH16596.1| RIKEN cDNA 2410018C17 g ( 402) 2118 401.7 1.3e-109 gi|18623507|gb|AAL76114.1|AF396665_1 dosal neuron- ( 402) 2107 399.7 5.2e-109 gi|149047455|gb|EDM00125.1| similar to RIKEN cDNA ( 402) 1988 377.7 2.2e-102 gi|26382880|dbj|BAC25511.1| unnamed protein produc ( 347) 1586 303.3 4.7e-80 gi|74196261|dbj|BAE33031.1| unnamed protein produc ( 312) 1495 286.4 5.1e-75 gi|60099187|emb|CAH65424.1| hypothetical protein [ ( 416) 1138 220.5 4.7e-55 gi|108994982|ref|XP_001118686.1| PREDICTED: simila ( 341) 1033 201.0 2.9e-49 gi|67968959|dbj|BAE00836.1| unnamed protein produc ( 324) 1023 199.1 9.9e-49 gi|53130758|emb|CAG31708.1| hypothetical protein [ ( 418) 985 192.2 1.6e-46 gi|118572309|sp|Q5ZKN5.2|FA53A_CHICK RecName: Full ( 418) 985 192.2 1.6e-46 gi|18623510|gb|AAL76115.1|AF396666_1 dorsal neural ( 418) 981 191.5 2.6e-46 gi|224050233|ref|XP_002198473.1| PREDICTED: family ( 419) 980 191.3 2.9e-46 gi|126332252|ref|XP_001375661.1| PREDICTED: simila ( 497) 978 191.0 4.3e-46 gi|119602988|gb|EAW82582.1| family with sequence s ( 360) 971 189.6 8.4e-46 gi|114592837|ref|XP_001144025.1| PREDICTED: dorsal ( 398) 960 187.6 3.7e-45 gi|149640606|ref|XP_001509798.1| PREDICTED: simila ( 323) 957 186.9 4.7e-45 gi|34531703|dbj|BAC86205.1| unnamed protein produc ( 398) 958 187.2 4.8e-45 gi|74736712|sp|Q6NSI3.1|FA53A_HUMAN RecName: Full= ( 398) 958 187.2 4.8e-45 gi|51703775|gb|AAH81349.1| Family with sequence si ( 413) 908 178.0 3e-42 gi|80476935|gb|AAI08857.1| LOC443593 protein [Xeno ( 413) 891 174.8 2.6e-41 gi|49118785|gb|AAH72942.1| LOC443593 protein [Xeno ( 414) 877 172.2 1.6e-40 gi|76779973|gb|AAI06448.1| MGC131154 protein [Xeno ( 373) 572 115.8 1.4e-23 gi|21594862|gb|AAH31654.1| FAM53B protein [Homo sa ( 305) 552 112.0 1.6e-22 gi|119917890|ref|XP_872493.2| PREDICTED: similar t ( 392) 553 112.3 1.7e-22 gi|193785719|dbj|BAG51154.1| unnamed protein produ ( 312) 547 111.1 3.1e-22 gi|109090876|ref|XP_001083541.1| PREDICTED: hypoth ( 422) 548 111.4 3.3e-22 gi|149061309|gb|EDM11732.1| similar to RIKEN cDNA ( 309) 542 110.2 5.8e-22 gi|74140112|dbj|BAE33783.1| unnamed protein produc ( 309) 542 110.2 5.8e-22 gi|215273981|sp|Q14153.2|FA53B_HUMAN RecName: Full ( 422) 540 109.9 9.3e-22 gi|168274398|dbj|BAG09619.1| FAM53B protein [synth ( 422) 540 109.9 9.3e-22 gi|73998982|ref|XP_854058.1| PREDICTED: hypothetic ( 461) 540 110.0 9.9e-22 gi|46396409|sp|Q8BGR5.1|FA53B_MOUSE RecName: Full= ( 422) 537 109.4 1.4e-21 gi|149061305|gb|EDM11728.1| similar to RIKEN cDNA ( 426) 537 109.4 1.4e-21 gi|194205561|ref|XP_001490743.2| PREDICTED: hypoth ( 390) 532 108.4 2.5e-21 gi|73951801|ref|XP_853358.1| PREDICTED: similar to ( 334) 526 107.2 4.7e-21 gi|148685797|gb|EDL17744.1| RIKEN cDNA A930008G19, ( 392) 521 106.4 1e-20 gi|26327431|dbj|BAC27459.1| unnamed protein produc ( 392) 519 106.0 1.3e-20 gi|194041619|ref|XP_001927063.1| PREDICTED: simila ( 438) 517 105.7 1.8e-20 gi|149061304|gb|EDM11727.1| similar to RIKEN cDNA ( 396) 516 105.4 1.9e-20 gi|194041631|ref|XP_001927179.1| PREDICTED: simila ( 415) 508 104.0 5.6e-20 gi|126290358|ref|XP_001368184.1| PREDICTED: simila ( 392) 504 103.2 8.9e-20 gi|109078780|ref|XP_001112778.1| PREDICTED: family ( 392) 498 102.1 1.9e-19 gi|149726308|ref|XP_001504325.1| PREDICTED: simila ( 392) 497 101.9 2.2e-19 gi|110278946|sp|Q29RM2.1|FA53C_BOVIN RecName: Full ( 392) 495 101.6 2.8e-19 gi|73970866|ref|XP_851197.1| PREDICTED: similar to ( 392) 495 101.6 2.8e-19 gi|66774131|sp|Q5R815.1|FA53C_PONAB RecName: Full= ( 392) 494 101.4 3.2e-19 gi|114601949|ref|XP_001171129.1| PREDICTED: hypoth ( 392) 494 101.4 3.2e-19 >>gi|148705474|gb|EDL37421.1| RIKEN cDNA 2410018C17, iso (421 aa) initn: 2262 init1: 2262 opt: 2266 Z-score: 2272.1 bits: 429.1 E(): 7.5e-118 Smith-Waterman score: 2266; 97.866% identity (98.476% similar) in 328 aa overlap (1-325:1-328) 10 20 30 40 50 60 mKIAA4 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA4 EISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA4 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA4 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA4 SSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR 250 260 270 280 290 300 310 320 330 340 mKIAA4 EEDARWTRPSLDFLKMTRVRPH---LCSWVLRKPVFCLILVLE ::::::::::::::::::. . ::: gi|148 EEDARWTRPSLDFLKMTRTLKNSKSLCSLDYEDDEDDTQEKTLVSSPCNSQGLVGIITPS 310 320 330 340 350 360 >>gi|148705473|gb|EDL37420.1| RIKEN cDNA 2410018C17, iso (503 aa) initn: 2235 init1: 2235 opt: 2239 Z-score: 2244.2 bits: 424.2 E(): 2.7e-116 Smith-Waterman score: 2239; 97.546% identity (98.466% similar) in 326 aa overlap (3-325:85-410) 10 20 30 mKIAA4 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQS .::::::::::::::::::::::::::::: gi|148 GIPRADPPQRPVEGDLEVYSEATFLRRLRVLFWKSSAHRCGLRKSPAMVTLITEKLQNQS 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA4 LDDLTRRACEAGPYSAEKLNKSGHLFPLEISVDKSPWKALRGGWPTGSQAASGPFSVGPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LDDLTRRACEAGPYSAEKLNKSGHLFPLEISVDKSPWKALRGGWPTGSQAASGPFSVGPH 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA4 GVSHTEGLKWQLESPGPMDVGHFLDLHDSTGPPAAPPTKRHCRSLSEPEELARCRSPWRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GVSHTEGLKWQLESPGPMDVGHFLDLHDSTGPPAAPPTKRHCRSLSEPEELARCRSPWRP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA4 GSSKVWTPISKRRCNSGGSATLQCCSGVGNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GSSKVWTPISKRRCNSGGSATLQCCSGVGNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPA 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA4 SASSGFVDGSEGSTSSGPPWLSTGPCPFSSRRRLSLSQEHLVDTGACLPSASSTPTSTPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SASSGFVDGSEGSTSSGPPWLSTGPCPFSSRRRLSLSQEHLVDTGACLPSASSTPTSTPE 300 310 320 330 340 350 280 290 300 310 320 mKIAA4 LGRHHGLLRCRSQPCVLDGRRVRRKRRREEDARWTRPSLDFLKMTRVRPH---LCSWVLR ::::::::::::::::::::::::::::::::::::::::::::::. . ::: gi|148 LGRHHGLLRCRSQPCVLDGRRVRRKRRREEDARWTRPSLDFLKMTRTLKNSKSLCSLDYE 360 370 380 390 400 410 330 340 mKIAA4 KPVFCLILVLE gi|148 DDEDDTQEKTLVSSPCNSQGLVGIITPSSSPRIPRPGPDSPSVWASGEPEASPGEGGSSG 420 430 440 450 460 470 >>gi|20306526|gb|AAH28656.1| RIKEN cDNA 2410018C17 gene (402 aa) initn: 2114 init1: 2114 opt: 2118 Z-score: 2124.5 bits: 401.7 E(): 1.3e-109 Smith-Waterman score: 2118; 97.735% identity (98.382% similar) in 309 aa overlap (20-325:1-309) 10 20 30 40 50 60 mKIAA4 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL ::::::::::::::::::::::::::::::::::::::::: gi|203 MVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL 10 20 30 40 70 80 90 100 110 120 mKIAA4 EISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 EISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 SSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR 230 240 250 260 270 280 310 320 330 340 mKIAA4 EEDARWTRPSLDFLKMTRVRPH---LCSWVLRKPVFCLILVLE ::::::::::::::::::. . ::: gi|203 EEDARWTRPSLDFLKMTRALKNSKSLCSLDYEDDEDDTQEKTLVSSPCNSQGLVGIITPS 290 300 310 320 330 340 >>gi|16741584|gb|AAH16596.1| RIKEN cDNA 2410018C17 gene (402 aa) initn: 2114 init1: 2114 opt: 2118 Z-score: 2124.5 bits: 401.7 E(): 1.3e-109 Smith-Waterman score: 2118; 97.735% identity (98.382% similar) in 309 aa overlap (20-325:1-309) 10 20 30 40 50 60 mKIAA4 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL ::::::::::::::::::::::::::::::::::::::::: gi|167 MVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL 10 20 30 40 70 80 90 100 110 120 mKIAA4 EISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 EISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 SSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR 230 240 250 260 270 280 310 320 330 340 mKIAA4 EEDARWTRPSLDFLKMTRVRPH---LCSWVLRKPVFCLILVLE ::::::::::::::::::. . ::: gi|167 EEDARWTRPSLDFLKMTRTLKNSKSLCSLDYEDDEDDTQEKTLVSSPCNSQGLVGIITPS 290 300 310 320 330 340 >>gi|18623507|gb|AAL76114.1|AF396665_1 dosal neuron-tube (402 aa) initn: 2103 init1: 2103 opt: 2107 Z-score: 2113.5 bits: 399.7 E(): 5.2e-109 Smith-Waterman score: 2107; 97.087% identity (98.058% similar) in 309 aa overlap (20-325:1-309) 10 20 30 40 50 60 mKIAA4 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL ::::::::::::::::::::::::::::::::::::::::: gi|186 MVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL 10 20 30 40 70 80 90 100 110 120 mKIAA4 EISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 EISVDKSPWRALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|186 SSRRRLSLSQEHLVDTGACRPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR 230 240 250 260 270 280 310 320 330 340 mKIAA4 EEDARWTRPSLDFLKMTRVRPH---LCSWVLRKPVFCLILVLE ::::::::::::::::::. . ::: gi|186 EEDARWTRPSLDFLKMTRTLKNSKSLCSLDYEDDEDDTQEKTLVSSPCNSQGLVGIITPS 290 300 310 320 330 340 >>gi|149047455|gb|EDM00125.1| similar to RIKEN cDNA 2410 (402 aa) initn: 1984 init1: 1984 opt: 1988 Z-score: 1994.5 bits: 377.7 E(): 2.2e-102 Smith-Waterman score: 1988; 91.262% identity (96.764% similar) in 309 aa overlap (20-325:1-309) 10 20 30 40 50 60 mKIAA4 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL :::::::::::::::::::::::: :::::::.:::::::: gi|149 MVTLITEKLQNQSLDDLTRRACEAVPYSAEKLDKSGHLFPL 10 20 30 40 70 80 90 100 110 120 mKIAA4 EISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHD ::.:::::::: .:::: :.::::::::::::::::::::::::::::: ::.::::.. gi|149 EIGVDKSPWKASHGGWPFRSRAASGPFSVGPHGVSHTEGLKWQLESPGPMAVGRFLDLRE 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|149 STGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGL 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 GNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF :::.:::.:.:::::.::::.:::::.::::::::::::::::::::::::::::::::: gi|149 GNPALQGSLAPGLPRKPVSPTGPTSPMTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPF 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 SSRRRLSLSQEHLVDAGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRR 230 240 250 260 270 280 310 320 330 340 mKIAA4 EEDARWTRPSLDFLKMTRVRPH---LCSWVLRKPVFCLILVLE ::::::::::::::::::. . ::: gi|149 EEDARWTRPSLDFLKMTRTLKNSKSLCSLDYEDDEDDTQAKTVVSSPCNSQGLVGIITPS 290 300 310 320 330 340 >>gi|26382880|dbj|BAC25511.1| unnamed protein product [M (347 aa) initn: 1560 init1: 1560 opt: 1586 Z-score: 1593.5 bits: 303.3 E(): 4.7e-80 Smith-Waterman score: 1586; 90.945% identity (92.126% similar) in 254 aa overlap (76-325:4-254) 50 60 70 80 90 100 mKIAA4 YSAEKLNKSGHLFPLEISVDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHT-EGLKWQL : :: : :.: : : : ::::::: gi|263 MAHWKPGS---SRPLSQWAHMVCLTPEGLKWQL 10 20 30 110 120 130 140 150 160 mKIAA4 ESPGPMDVGHFLDLHDSTGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKR ::::::::::: :::::::: ::::::::::::::::::::::::::::::::::::::: gi|263 ESPGPMDVGHFRDLHDSTGPLAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKR 40 50 60 70 80 90 170 180 190 200 210 220 mKIAA4 RCNSGGSATLQCCSGVGNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RCNSGGSATLQCCSGVGNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEG 100 110 120 130 140 150 230 240 250 260 270 280 mKIAA4 STSSGPPWLSTGPCPFSSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 STSSGPPWLSTGPCPFSSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRS 160 170 180 190 200 210 290 300 310 320 330 340 mKIAA4 QPCVLDGRRVRRKRRREEDARWTRPSLDFLKMTRVRPH---LCSWVLRKPVFCLILVLE ::::::::::::::::::::::::::::::::::. . ::: gi|263 QPCVLDGRRVRRKRRREEDARWTRPSLDFLKMTRTLKNSKSLCSLDYEDDEDDTQEKTLV 220 230 240 250 260 270 gi|263 SSPCNSQGLVGIITPSSSPRIPRPGPDSPSIWASGEPEANPGEGGSSGDPSDWDSAGEEG 280 290 300 310 320 330 >>gi|74196261|dbj|BAE33031.1| unnamed protein product [M (312 aa) initn: 1491 init1: 1491 opt: 1495 Z-score: 1503.2 bits: 286.4 E(): 5.1e-75 Smith-Waterman score: 1495; 96.804% identity (97.717% similar) in 219 aa overlap (110-325:1-219) 80 90 100 110 120 130 mKIAA4 SQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHDSTGPPAAPPTKRHCRSLSE :::::::::::::::::::::::::::::: gi|741 MDVGHFLDLHDSTGPPAAPPTKRHCRSLSE 10 20 30 140 150 160 170 180 190 mKIAA4 PEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGVGNPTLQGTLVPGLPRRPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSGVGNPTLQGTLVPGLPRRPVS 40 50 60 70 80 90 200 210 220 230 240 250 mKIAA4 PAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPFSSRRRLSLSQEHLVDTGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGPCPFSSRRRLSLSQEHLVDTGAC 100 110 120 130 140 150 260 270 280 290 300 310 mKIAA4 LPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRREEDARWTRPSLDFLKMTRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|741 LPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVRRKRRREEDARWTRPSLDFLKMTRT 160 170 180 190 200 210 320 330 340 mKIAA4 RPH---LCSWVLRKPVFCLILVLE . ::: gi|741 LKNSKSLCSLDYEDDEDDTQEKTLVSSPCNSQGLVGIITPSSSPRIPRPGPDSPSIWASG 220 230 240 250 260 270 >>gi|60099187|emb|CAH65424.1| hypothetical protein [Gall (416 aa) initn: 1051 init1: 424 opt: 1138 Z-score: 1144.7 bits: 220.5 E(): 4.7e-55 Smith-Waterman score: 1138; 58.462% identity (75.385% similar) in 325 aa overlap (20-325:1-319) 10 20 30 40 50 60 mKIAA4 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL :::::::::::::::::: .. . . ::.::::::: :: . gi|600 MVTLITEKLQNQSLDDLTCKTYNINLYSSEKLNKSGSLFSF 10 20 30 40 70 80 90 100 110 mKIAA4 EISVDKSPWKALRGGWP--TGSQAASGPFSVGPH--GVSHTEGLKWQLE-SPGPMDVGHF :: . :::::: :: : : .. .. :: : : : . . .:.:: : : : : . gi|600 EI--NDSPWKALNGGCPIQTDARNSAYPFPVCPFSTGPASNGALQWQQEPSSTSMVSGWI 50 60 70 80 90 120 130 140 150 160 170 mKIAA4 --LDLHDSTGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSAT :.:....: : ::::::::::::::.:::::::::.::.::::::.:::::::::::: gi|600 SELNLNENSGQPLAPPTKRHCRSLSEPDELARCRSPWKPGNSKVWTPVSKRRCNSGGSAT 100 110 120 130 140 150 180 190 200 210 220 mKIAA4 LQCCSGVGNPTLQGTLVPGLPRRPVS-------PAGPTSPLTPRPASASSGFVDGSEGST :: :.. :. ::: . .::. .: . :::. :::.::::::::.::::: gi|600 LQRCNSHGSATLQRSTSISLPQNILSLNNVFTVTSFNTSPV-PRPSSASSGFVDSSEGST 160 170 180 190 200 210 230 240 250 260 270 280 mKIAA4 SSGPPWLSTGPCPFSSRRRLSLSQEHLVDTGA-CL-PSASSTPTSTPELGRHHGLLRCRS ::. : : ::: :. ::::::::::...:: :: :.: : ...:..::::::: gi|600 SSSTRWNSGGPCDFNPRRRLSLSQEHITETGNLCLQPTALPPPH---RVSRRQGLLRCRS 220 230 240 250 260 270 290 300 310 320 330 340 mKIAA4 QPCVLDGRRVRRKRRREEDARWTRPSLDFLKMTRVRPH---LCSWVLRKPVFCLILVLE :::::. .. : :::::::.::.::::::.::::. . ::: gi|600 QPCVLNEKKSRLKRRREEDVRWNRPSLDFFKMTRTLKNSKSLCSLDYEDDDDDTQMKTIV 280 290 300 310 320 330 gi|600 SSPCDSNDLMNIITPGSSPMKEQLDEVRHHGSCQGSFKTRDYKKAAAVCESDEDTSDCES 340 350 360 370 380 390 >>gi|108994982|ref|XP_001118686.1| PREDICTED: similar to (341 aa) initn: 1368 init1: 652 opt: 1033 Z-score: 1040.9 bits: 201.0 E(): 2.9e-49 Smith-Waterman score: 1346; 67.516% identity (82.166% similar) in 314 aa overlap (20-326:1-301) 10 20 30 40 50 60 mKIAA4 CPVFWKSSAHRCGLRKSPAMVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPL ::::::::::.::::::: .. :::::::: ::.::.:::: gi|108 MVTLITEKLQSQSLDDLTCKT-EAGPYSAETLNSSGRLFPL 10 20 30 40 70 80 90 100 110 mKIAA4 EISVDKSPWKALRGGWPTGSQAASGP---FSVGPHGVSHTEGLKWQLESPGP---MDVGH :.. :.::::.: :: :.:::::. : : : ...:: ::.:. ::::: . .. gi|108 ELN-DQSPWKVLSGGRPVGSQAATRPDFCFLPGLSAAAHTMGLQWRPESPGPGVGLGAAS 50 60 70 80 90 120 130 140 150 160 170 mKIAA4 FLDLHDSTGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATL .: .::: .:::::::::::::::::.::::::::::: ::::.::::::::::::: gi|108 TVDPSESTGSSTAPPTKRHCRSLSEPEELVRCRSPWRPGSSTVWTPVSKRRCNSGGSATL 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA4 QCCSGVGNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLS : :.: :.. :: . .::::: ::::.::::::::.::::..:: :: : gi|108 Q-----GSP---GAV---LPSSAAWLTGPTSPATPRPSSASSGFVDSSEGSAGSGLPWCS 160 170 180 190 200 240 250 260 270 280 290 mKIAA4 TGPCPFSSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRV . : .: :::::::::.:. .:. ::::::.::::::::::.::::::::::::.:.: gi|108 AEPYLLSVRRRLSLSQEQLAGVGTPLPSASSSPTSTPELGRHRGLLRCRSQPCVLSGKRS 210 220 230 240 250 260 300 310 320 330 340 mKIAA4 RRKRRREEDARWTRPSLDFLKMTRVRP-HLCSWVLRKPVFCLILVLE ::::::::::::::::::::::::.: . :.: gi|108 RRKRRREEDARWTRPSLDFLKMTRLRAGEQCGWRAGWDPLGSSGTLVLGHTEGTVSFASS 270 280 290 300 310 320 gi|108 HQWVLQLILPGAL 330 340 340 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 02:09:39 2009 done: Tue Mar 17 02:15:41 2009 Total Scan time: 831.220 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]