Comparison of KIAA cDNA sequences between mouse and human (KIAA1844)
<<Original sequence data>>
mouse mKIAA1844 (mia34065) length: 3092 bp, CDS: 3 - 1712
human KIAA1844 (fj12009) length: 4526 bp, CDS: 3 - 1106
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 283 - 284 2 0 0.0
CDS: 285 - 1397 705 62 8.1
3'UTR: 1398 - 4832 1055 944 47.2
amino acid
CDS: 285 - 1397 243 125 34.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mia34065 1 GGGGCTGCCCGCCGCCCGCCCGCCCGCCTGCCTCGCGGCCGCTCTCCCCC 50
fj12009 1 .................................................. 1
51 ----+----*----+----*----+----*----+----*----+----* 100
mia34065 51 TCCCCGACACACACACACAGCCGGGCATTGATGGTAATGTATGCGAGGAA 100
fj12009 1 .................................................. 1
101 ----+----*----+----*----+----*----+----*----+----* 150
mia34065 101 ACAGCAGAGACTCAGTGATGGCTGTCACGACCGGAGAGGGGACTCTCAGC 150
fj12009 1 .................................................. 1
151 ----+----*----+----*----+----*----+----*----+----* 200
mia34065 151 CTTTCCAGGCACTTAAGTATTCTTCAAAGAGTCACCCCAGTAGTGGTGAT 200
fj12009 1 .................................................. 1
201 ----+----*----+----*----+----*----+----*----+----* 250
mia34065 201 CACAGACATGAAAAGATGCGAGACGCCGCAGATCCTTCACCACCAAACAA 250
fj12009 1 .................................................. 1
251 ----+----*----+----*----+----*----+----*----+----* 300
Y S D S T G
mia34065 251 AATGTTGCGGAGATCTAATAGTCCTGAAAACAAATACAGTGACAGCACAG 300
||||||||||||||||||
fj12009 1 ................................AATACAGTGACAGCACAG 18
Y S D S T G
301 ----+----*----+----*----+----*----+----*----+----* 350
H N K A K N V H T Q R V R E R D
mia34065 301 GTCACAACAAGGCCAAAAACGTGCACACTCAGAGAGTTAGAGAAAGGGAC 350
|||||| ||||||||||| ||||| ||||| ||||||||||| |||||
fj12009 19 GTCACAGTAAGGCCAAAAATGTGCATACTCACAGAGTTAGAGAGAGGGAT 68
H S K A K N V H T H R V R E R D
351 ----+----*----+----*----+----*----+----*----+----* 400
G G T S Y S P Q E N S H N H S A L
mia34065 351 GGTGGGACCAGTTACTCTCCACAAGAAAACTCACACAACCACAGTGCACT 400
||||||||||||||||||||||||||||| ||||||||||||||||| ||
fj12009 69 GGTGGGACCAGTTACTCTCCACAAGAAAATTCACACAACCACAGTGCTCT 118
G G T S Y S P Q E N S H N H S A L
401 ----+----*----+----*----+----*----+----*----+----* 450
H S S N S H S S N P S N N P S K T
mia34065 401 TCATAGTTCAAATTCACATTCTTCTAATCCAAGCAATAATCCAAGCAAAA 450
||||||||||||||||||||||||||||||||||||||| ||||||||||
fj12009 119 TCATAGTTCAAATTCACATTCTTCTAATCCAAGCAATAACCCAAGCAAAA 168
H S S N S H S S N P S N N P S K T
451 ----+----*----+----*----+----*----+----*----+----* 500
S D A P Y D S A D D W S E H I S
mia34065 451 CTTCAGATGCACCTTATGATTCTGCAGATGATTGGTCTGAGCACATTAGC 500
||||||||||||||||||||||||||||||| ||||||||||| ||||||
fj12009 169 CTTCAGATGCACCTTATGATTCTGCAGATGACTGGTCTGAGCATATTAGC 218
S D A P Y D S A D D W S E H I S
501 ----+----*----+----*----+----*----+----*----+----* 550
S S G K K Y Y Y N C R T E V S Q W
mia34065 501 TCATCTGGAAAAAAGTACTACTACAATTGTCGCACAGAAGTTTCACAGTG 550
|| ||||| ||||||||||||||||||||||| |||||||||||||| ||
fj12009 219 TCTTCTGGGAAAAAGTACTACTACAATTGTCGAACAGAAGTTTCACAATG 268
S S G K K Y Y Y N C R T E V S Q W
551 ----+----*----+----*----+----*----+----*----+----* 600
E K P K E W L E R E Q R Q K E A N
mia34065 551 GGAGAAACCAAAAGAGTGGCTTGAAAGAGAACAGAGACAAAAAGAAGCAA 600
||| ||||||||||||||||||||||||||||||||||||||||||||||
fj12009 269 GGAAAAACCAAAAGAGTGGCTTGAAAGAGAACAGAGACAAAAAGAAGCAA 318
E K P K E W L E R E Q R Q K E A N
601 ----+----*----+----*----+----*----+----*----+----* 650
K L A V N S F P K D R D Y R R E
mia34065 601 ATAAGCTGGCAGTTAATAGTTTCCCAAAAGACAGGGATTACAGAAGAGAG 650
| ||| ||||||| || || ||||||||||| ||||||||||||||||||
fj12009 319 ACAAGATGGCAGTCAACAGCTTCCCAAAAGATAGGGATTACAGAAGAGAG 368
K M A V N S F P K D R D Y R R E
651 ----+----*----+----*----+----*----+----*----+----* 700
V M Q A T A T S G F T S G -
mia34065 651 GTGATGCAAGCAACAGCCACTAGTGGGTTCACCAGTGGAA.......... 690
||||||||||||||||||||||||||||| |||||||||
fj12009 369 GTGATGCAAGCAACAGCCACTAGTGGGTTTGCCAGTGGAATGGAAGACAA 418
V M Q A T A T S G F A S G M E D K
701 ----+----*----+----*----+----*----+----*----+----* 750
mia34065 691 .................................................. 691
fj12009 419 GCATTCCAGTGATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCTCAAA 468
H S S D A S S L L P Q N I L S Q T
751 ----+----*----+----*----+----*----+----*----+----* 800
mia34065 691 .................................................. 691
fj12009 469 CAAGCAGACACAATGACAGAGACTACAGACTGCCAAGAGCAGAGACTCAC 518
S R H N D R D Y R L P R A E T H
801 ----+----*----+----*----+----*----+----*----+----* 850
mia34065 691 .................................................. 691
fj12009 519 AGTAGTTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAAC 568
S S S T P V Q H P I K P V V H P T
851 ----+----*----+----*----+----*----+----*----+----* 900
mia34065 691 .................................................. 691
fj12009 569 TGCTACCCCAAGCACTGTTCCTTCTAGTCCATTTACGCTACAGTCTGATC 618
A T P S T V P S S P F T L Q S D H
901 ----+----*----+----*----+----*----+----*----+----* 950
mia34065 691 .................................................. 691
fj12009 619 ACCAGCCAAAGAAATCATTTGATGCTAATGGAGCATCTACTTTATCAAAA 668
Q P K K S F D A N G A S T L S K
951 ----+----*----+----*----+----*----+----*----+----* 1000
mia34065 691 .................................................A 691
|
fj12009 669 CTGCCTACACCCACATCTTCTGTCCCTGCACAGAAAACAGAAAGAAAAGA 718
L P T P T S S V P A Q K T E R K E
1001 ----+----*----+----*----+----*----+----*----+----* 1050
S A P G D K S I S H S C T T P S T
mia34065 692 ATCTGCTCCAGGAGACAAATCAATATCACATTCTTGCACAACTCCTTCCA 741
|||| | ||||||||||| | |||||||||||||||||||||||||||
fj12009 719 ATCTACATCAGGAGACAAACCCGTATCACATTCTTGCACAACTCCTTCCA 768
S T S G D K P V S H S C T T P S T
1051 ----+----*----+----*----+----*----+----*----+----* 1100
S S A S G L N P T S A P P T S A
mia34065 742 CATCTTCAGCCTCTGGCCTGAACCCTACATCTGCGCCTCCGACATCTGCT 791
| ||||| |||||||| |||||||| |||||||| ||||| |||||||||
fj12009 769 CGTCTTCTGCCTCTGGACTGAACCCCACATCTGCACCTCCAACATCTGCT 818
S S A S G L N P T S A P P T S A
1101 ----+----*----+----*----+----*----+----*----+----* 1150
S A V P V S P V P Q S T I P P L L
mia34065 792 TCAGCAGTACCTGTTTCTCCCGTTCCACAATCAACAATACCTCCATTACT 841
||||| || ||||||||||| |||||||| || |||||||||| |||||
fj12009 819 TCAGCGGTCCCTGTTTCTCCTGTTCCACAGTCGCCAATACCTCCCTTACT 868
S A V P V S P V P Q S P I P P L L
1151 ----+----*----+----*----+----*----+----*----+----* 1200
Q D P N L F R Q L L P A L Q A T L
mia34065 842 TCAGGACCCAAATCTTTTTAGACAGTTGCTTCCTGCTTTGCAAGCCACGC 891
|||||||||||||||| ||||||| |||||||||||||||||||||||||
fj12009 869 TCAGGACCCAAATCTTCTTAGACAATTGCTTCCTGCTTTGCAAGCCACGC 918
Q D P N L L R Q L L P A L Q A T L
1201 ----+----*----+----*----+----*----+----*----+----* 1250
Q L N N S N V D I S K I N E
mia34065 892 TACAGCTTAATAATTCTAATGTGGACATATCCAAAATAAATGAAGTTCTT 941
| ||||||||||||||||||||||||||||| |||||||||||
fj12009 919 TGCAGCTTAATAATTCTAATGTGGACATATCTAAAATAAATGA....... 961
Q L N N S N V D I S K I N E
1251 ----+----*----+----*----+----*----+----*----+----* 1300
A A V T Q A S L Q S I I H K F L
mia34065 942 ACAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCT 991
||||||||| |||||||| || ||||||||||| || || ||||||||
fj12009 962 ..AGCAGCTGTGACACAAGCCTCACTGCAGTCTATAATTCATAAGTTTCT 1009
A A V T Q A S L Q S I I H K F L
1301 ----+----*----+----*----+----*----+----*----+----* 1350
T A G P S A F N I T S L I S Q A A
mia34065 992 TACTGCTGGACCATCTGCTTTCAACATCACCTCACTGATTTCTCAAGCTG 1041
||||||||||||||||||||||||||| || || ||||||||||||||||
fj12009 1010 TACTGCTGGACCATCTGCTTTCAACATAACGTCTCTGATTTCTCAAGCTG 1059
T A G P S A F N I T S L I S Q A A
1351 ----+----*----+----*----+----*----+----*----+----* 1400
Q L S T -
mia34065 1042 CCCAGCTTTCTACACA.................................. 1057
| ||||| ||||||||
fj12009 1060 CTCAGCTCTCTACACAAGGTATTCTTACTCATCTTAGATATCTCTAGAAT 1109
Q L S T Q G I L T H L R Y L *
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mia34065 1058 .................................................. 1058
fj12009 1110 GGCATCTTGATTTTGTTTTGGAATTAATAGCCCTTTTTTGTATTTAGTTT 1159
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mia34065 1058 .................................................. 1058
fj12009 1160 TTTCTTTCATTTTTTTTTTTAGTTTTTTAAGAGATTAGCTACAATAATTT 1209
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mia34065 1058 .................................................. 1058
fj12009 1210 TGTTTTTTTTGTAACACTGGCATATACAGTAGTATTTTTATTTCCTTTCT 1259
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mia34065 1058 .................................................. 1058
fj12009 1260 TTTTAGATGAAGCAAGCTTTGACATTTGTCTTAAGGTATTGCCATCAAAT 1309
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mia34065 1058 .................................................. 1058
fj12009 1310 CTGTAATTATTTAAGACAGTATTTAATTCAGACTTTGTTATTAATGAGTT 1359
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mia34065 1058 .................................................. 1058
fj12009 1360 TTTTTATGCCAAAGCTGAAAGTAAACTATGATGTGCCATATATCTTTGTG 1409
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mia34065 1058 .................................................. 1058
fj12009 1410 AAACATTGCATGTATTTGAAGAGTTGAAGTTTGGTTCAGATTGACGTTAG 1459
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mia34065 1058 .................................................. 1058
fj12009 1460 ATGTTTTTTGACTGGATAATATGGAAATGCTCATTTTCTGCCTTGAATTA 1509
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mia34065 1058 .................................................. 1058
fj12009 1510 GATATCCCTCTTCATGAAGGTATCCAAATGGAGAGAGATACACATAGGAG 1559
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mia34065 1058 .................................................. 1058
fj12009 1560 CAAATGGGAAGTGAAAGGGTCACTTTGTCAGAAAGCTGATAAACAGCAGG 1609
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mia34065 1058 .................................................. 1058
fj12009 1610 AATGCCTTGTCTGGAATGGAAGTATAATGGTGCAAAGACTCTTGCAACCC 1659
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mia34065 1058 .................................................. 1058
fj12009 1660 TCTGGCTAGCCTCATGAGCAGGAGACTGCGTGGGATACCTGGGCCTAAAT 1709
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mia34065 1058 .................................................. 1058
fj12009 1710 GTAGAATAAGAAAGAAGAAATAAGGATGGTGAGGAGGCCTTCCATGTGAG 1759
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mia34065 1058 .................................................. 1058
fj12009 1760 ATTAGGTTCAGGCCTAGCTTCCTGTTCCAGCCACATAAAGGAGAGTGGGC 1809
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mia34065 1058 .................................................. 1058
fj12009 1810 CACACTGGGTGTGCTTACCTCTGAACACACAGCTCACTTAGTCAGTGTGG 1859
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mia34065 1058 .................................................. 1058
fj12009 1860 CCCAGTGAGAAGGTCAGATTCTGATTTATTCCAATAAGTGTTCTCTGGGT 1909
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mia34065 1058 .................................................. 1058
fj12009 1910 AATATGGGGGTGGGGGGGTTTAGAGTAATACAAATATCTTTGCCACATAT 1959
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mia34065 1058 .................................................. 1058
fj12009 1960 ATTACAAAGGACTTTAGTTTTTTGTTTTGTTTTGTTTTTCTTTAAAATTA 2009
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mia34065 1058 ..................AGCCCAGCCATCTAATCAGTCTCCAATGTCTC 1089
|||||||||||||||||||||||| ||||||
fj12009 2010 ATTGCTTCCCTCTTTTACAGCCCAGCCATCTAATCAGTCTCCGATGTCTT 2059
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mia34065 1090 TGACATCTGATGCTTCATCCCCAAGATCCTATGTGTCTCCAAGAATAAGC 1139
| ||||||||||| |||||||||||||| ||||| |||||||||||||||
fj12009 2060 TAACATCTGATGCGTCATCCCCAAGATCATATGTTTCTCCAAGAATAAGC 2109
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mia34065 1140 ACACCTCAAACTAATACAGTCCCTATGAAACCTTTGATTAGTACTCCACC 1189
|||||||||||||| ||||||||||| ||||||||||| |||||||| ||
fj12009 2110 ACACCTCAAACTAACACAGTCCCTATCAAACCTTTGATCAGTACTCCTCC 2159
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mia34065 1190 TGTTTCATCCCAGCCAAAGGTTAGTACTCCAGTAGTTAAGCAAGGACCAG 1239
||||||||| ||||||||||||||||||||||||||||||||||||||||
fj12009 2160 TGTTTCATCACAGCCAAAGGTTAGTACTCCAGTAGTTAAGCAAGGACCAG 2209
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mia34065 1240 TGTCACATTCGGCTACACAGCAGCCTGTAACTGCTGACAAGCAGCAGAGC 1289
||||||| || || |||||||||||||||||||||||||||||||| |
fj12009 2210 TGTCACAGTCAGCCACACAGCAGCCTGTAACTGCTGACAAGCAGCAAGGT 2259
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mia34065 1290 CATGATCCTGTTTCTCCTCGAAGTCTTCAGCGCT.....TAAGTAGCCAG 1334
||||| ||||| |||||||||||||||||||||| || || | |
fj12009 2260 CATGAACCTGTCTCTCCTCGAAGTCTTCAGCGCTCAAGGTAGGTTGATAT 2309
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mia34065 1335 AGAAGTCCATCACC....TGGTCCAAATCATACTTGTAGTAGTAATGCAT 1380
| | ||| || | | | || | ||| || |
fj12009 2310 TGTATATTGAGACCACATTGTTTTATTTAATGATGGTACACTGCATTGTT 2359
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mia34065 1381 CAACTGCAACTGTTGTACCACAGAATGCATCTGCTAGACCTGCGTGCTCA 1430
| | | |||| | |||| | | || | || | || |
fj12009 2360 TGAATATTATATCTGTAAAATAGAACTTAACCTTTA.AACTCCATGAATA 2408
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mia34065 1431 TTAACACCTACTCTAGCAGCGCACTTCAATGATAATCTCATA.AAGCATG 1479
| || || || | | | || || | | ||
fj12009 2409 CCCTAAAGTAGGCTTACATGTTGTAAAATTTACAAAGACAAACCTGTATA 2458
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mia34065 1480 TTCAAGGGTGGCCTGCAGACCACGCAGAGAAACAGGCATCAAGATTGCGT 1529
||| || | | || ||| | | | | |||
fj12009 2459 CAAGAGGTAGGTTATTGTCTCTAGTAGTGAAGCCCGGGT.TATTTTGAAG 2507
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mia34065 1530 GAAGAAGCCCAT..................AATATGGGAAGTGTACATAT 1561
||| || | | |||||| | || | ||
fj12009 2508 AAAGTGGCTCTTTAAAATTTTACACAGTGGAATATGACGGGGCTAAAGAT 2557
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mia34065 1562 GTCAGAAATATGTAC...TGAGTTAAAAAATTTGAGATCATTAGTTCGAG 1608
| || | ||||| || | | |||| | | ||| ||| ||
fj12009 2558 TTGTGATACTTGTACCAGAAAGGCACACGATTTTACAATATTTGTTGGAA 2607
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mia34065 1609 TATGTGAAATTCAAGCAACTTTGCGAGAGCAGAGGATACTATTTTTGAGA 1658
| | || ||| | | ||||| |||| |
fj12009 2608 TTACCTTACTT..TTTAACCTCCTCATAGCAG.........TTTTGGTTT 2646
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mia34065 1659 CAACAAATTAAGGAACTCGAAAAGCTGAAAAATCAGAATTCCTTCATGGT 1708
| | ||| | ||| | ||| ||| | | | | || || ||
fj12009 2647 GAGTATATTGATGAAAGCCAAAGTCTGGTATCTAAAACTTGGGCCAATGT 2696
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mia34065 1709 TTGAAGATGTGAATAATTGCACATGATCTCTTAGAGGAACTGTAAATCTA 1758
|| | | ||| | | | ||| |||||| | |||
fj12009 2697 TTCCCAACTGGTATATGTCAGGCTTTCCCAATAGCTTAACTGTGACCCTA 2746
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mia34065 1759 TTGCCCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTT 1808
| | | | | | | || | | ||| | | | ||
fj12009 2747 TACGGATGGCTTTTTAGATAGTTCTATACTGCTGTATTGTGTTAGCACTT 2796
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mia34065 1809 AAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTG........... 1847
| | | | | | |||| | | | ||
fj12009 2797 TTCTTTGTTCATTAACAACACAACTTTAAATGACATTTGTTGAATGAATG 2846
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mia34065 1848 .................................................. 1848
fj12009 2847 GTTTTCATTTGATTGATTTTCCTGTTTTTTATTTCATGCTATGAGGTAGC 2896
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mia34065 1848 ......................................AGAGTCAATTCA 1859
| | || ||||
fj12009 2897 AAAATAATTCAACTGTTGTTTTTATTGTTGTTTTCTAAACAAGCATTTCA 2946
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mia34065 1860 GGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGTAGATTTCTT 1909
| | | | ||| | || | |||| || |
fj12009 2947 GAACTTACACCTCCAAATGAGAGTTGTTCCCTTCAAAATAATGACCTTGG 2996
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mia34065 1910 GTAGATGTATCTTCACGTTGTAAATAT....................... 1936
| || ||| | | || ||| |
fj12009 2997 GAAGCTGTCTACTTACTCCAGCAATGTTGCCATTGCTCTGAACATTTTTG 3046
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mia34065 1937 .................................................. 1937
fj12009 3047 GGAAATTCTTCTTTTAAATTGTTTTTAGAGGCTGCAGTATTATTTTAAAT 3096
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mia34065 1937 ..........................GTTTTGTAGAGTGAAGCCATGGGA 1960
||| | ||| | | ||| |
fj12009 3097 ATCCTCAGTGATGAAAACTCTTCATCCTTTGGGAGATTTAGTTTTTGGAA 3146
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mia34065 1961 AGCCATG....TGTAACAGAGCTTAGACATCTGAAACTAATCAATG.... 2002
| || | |||||| || | |||| | | |
fj12009 3147 ATAACTGAAATTCATTCAGAGCCAAGTCTGGTGAAGCAGGTAGGAGATCA 3196
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mia34065 2003 .CTGAGGTGGCTAAATACCTAGCCTTTTAC......ATGGAAACCTGTCT 2045
|| |||| ||||| | | | | || || | | |
fj12009 3197 ACTTGGGTGATTAAATTTTTTGGTTCTCACCACCATATCCCCAACCCTGG 3246
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mia34065 2046 GCAAAATTAGCTTTTTTTAAAAAAAGAAAAAGAAAAAATTGGGGGGGGGG 2095
| ||| | |||||||| |||| |||||| | |
fj12009 3247 CCCAAACCATTCAGTTTTAAAAGAAGATAAAGAATCTCAGAGTGTTATTT 3296
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mia34065 2096 GTTAATTTATCATTTAGAAAT............................. 2116
|| || | ||| | |
fj12009 3297 TTTTGGTTTTGTTTTGCCACTGTGCTTGTTCAGTGCTATCCAATAAAATG 3346
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mia34065 2117 ......CTTGCATTTTCAAAAATCCAGTGCAAGCGCCAGGTGATCTGTGT 2160
|| || || | | || | ||| | ||||
fj12009 3347 TCTGTATTTTGCTTCACATTATTTCACCCTCTGATTCAGCAGTTCTGACG 3396
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mia34065 2161 CTGAGGATACG...................ATTTTGAACCTTATGAGCAG 2191
||| | | | || | || |||||||||
fj12009 3397 TTGAACAAAGGCAATATATATTTTCCCCTTATCTAGATGTGTATGAGCAG 3446
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mia34065 2192 TGTACAAATATCATGAGACAACTG.......................... 2215
| | || || | ||| |||
fj12009 3447 TCTTCAGATGTGCATCTACAGCTGTTAAAATGTGACTTTTTTTAGTTATA 3496
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mia34065 2216 .................................................. 2216
fj12009 3497 TTATTAGTGTTTGTGGTACACAAAGTTAACAGGTTCTGCTCTCAGATTTG 3546
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mia34065 2216 ...................................ATCAGCACTTGCACC 2230
| || || ||
fj12009 3547 GAGAGTAGTTTACATTTGACTCTGACAGTAGTGTTAAAAGGGTTTTTTCC 3596
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mia34065 2231 TGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTTCATT 2280
| ||| | || | ||| | |||| | | || |||
fj12009 3597 CCCTAAAGTGTTTTGAGGAATCATATACTTTGGA.......TTATTAATT 3639
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mia34065 2281 TCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATT 2330
|| ||| | |||| | || || ||| | |
fj12009 3640 CTCTTTATTTGACATTAAAATAACAAATTTTTCTTAGGAATTTGGATA.T 3688
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mia34065 2331 TTTTTTTTTTTTTTAAGGTGCCCCCTTTCCTTTCTTGGGGCACTGTTGCT 2380
||| || | ||||| | | | || | || | | | |
fj12009 3689 CTTTAAGTTAATAAAAGGTATTAACATGCAGTTTCTAGGATAAGGATACC 3738
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mia34065 2381 GTGGCACTTTTCTATAAC........CTTGTCATTCCTATGTACAGTAGC 2422
| ||| | | ||| | | |||| | | ||||||
fj12009 3739 CAGAAACTACTTTTAAACATACTACACATTCAATTCTGTTTTCTAGTAGC 3788
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mia34065 2423 TGGA................................AGTCGCAGTGAGCA 2440
|| | | | ||| |
fj12009 3789 CAGAGAAGTCCATCACCTGGTCCCAATCATACTTCTAATAGTAGTAATGC 3838
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mia34065 2441 AGCATAACCCACGTTTGTATAAATTATT..........GAAATCCATTTT 2480
| || | | || ||||| | | | || | | ||
fj12009 3839 ATCAAATGCAACAGTTGTACCACAGAATTCTTCTGCCCGATCCACGTGTT 3888
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mia34065 2481 CACCTAAGAATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAA... 2527
|| | | || ||| ||| | | | || | | | |||
fj12009 3889 CATTAACGCCTGCACTAGCAGCACACTTCAGTGAAAATCTCATAAAACAC 3938
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mia34065 2528 GTACATTAACTGCTCAAATACAAGGAAGTGGCCCAATGAACATGGTTGTG 2577
|| || | || | | | | || | || | || | || |
fj12009 3939 GTTCAAGGATGGCCTGCAGATCATGCAGAGAAGCAGGCATCAAGATTACG 3988
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mia34065 2578 GGAGGGGAAAGGAGAAACAAAGCTAGTCAGATGTGAATTGTATCTGTTGT 2627
|| | |||| | | ||| ||| | | || |||
fj12009 3989 CGAAG..............AAGCGCATAACATGGGAACTAT.TCACATGT 4023
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mia34065 2628 AATAAACATGTTTAAACAAACACATTTTGTTACTTTTTTTCCCTTCGGCC 2677
||| ||| | | | | ||| | ||| |||
fj12009 4024 CCGAAATTTGTACTGAATTAAAAAATTTAAGATCTTTAGTCCGAGTATGT 4073
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mia34065 2678 GGTACATATTAGAATTTGAACTACATGAGGATTCT.TTATCAAAACTATT 2726
| | | | |||| | ||||| || || | | || |
fj12009 4074 GAAATTCAAGCAACTTTGCGAGAGCAAAGGATACTATTTTTGAGACAACA 4123
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mia34065 2727 CTTGTTGAATATTTATATCTTATTACAAGTAATAATTCCTTATAGGGAGG 2776
| | | || | | || | || | | |||||||| ||
fj12009 4124 AATTAAGGAACTTGAAAAGCTA..AAAAATCAGAATTCCTTCATGG.... 4167
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mia34065 2777 TTTTGTTTAAAGTACATTAACATAATTGTGTAAAGGATATTTAATGAAAG 2826
|||| | | | | | | || |
fj12009 4168 ..........................TGTGAAGATGTGAATAATTGCACA 4191
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mia34065 2827 TGAAATT..GAACAAGAATGAAGAAGCACTTCCTCAGTGGCATCACTTGT 2874
|| || ||||| ||| || | || | || | | || || |
fj12009 4192 TGGTTTTGAGAACAGGAACTGTAAATCTGTTGCCCAATCTTAACATTTTT 4241
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mia34065 2875 TCAGCTTGGTTCAGCTGTCT........TGCTGCTCTGACACTTCATTTT 2916
|| || | || | ||| | | | |
fj12009 4242 GAGCTGCATTTAAGTAGACTTTGGACCGTTAAGCTGGGCAAAGGAAATGA 4291
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mia34065 2917 GAAGGATGTCTGTGCTGTACTCAACTTTTCAAGTCTGGTGCTGACTGTTG 2966
|||| | |||| | |||| | | |||
fj12009 4292 CAAGGGGACGGGGTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTG 4341
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mia34065 2967 .TTCCTAACATCACAAAACAGTTTGTGTCATTGAGTTACTTGCTGTACCC 3015
|| ||| | | || || | || | || | | || ||
fj12009 4342 ATTTGTAAAACCCTTGAAATGTAGATTTCTTGTAGATGTATCCTTCACGT 4391
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mia34065 3016 AGAAA.....CATGGGACATCTCAGCTTTGTATAGTGTTTCCTAAAGTAT 3060
| || | | | | ||| || || | ||| |
fj12009 4392 TGTAAATATGTTTTGTAGAGTGAAGCCATGGGAAGCCATGTGTAACAGAG 4441
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mia34065 3061 ATTAAAATAAAAAAAGAAACGATTGCTACTAT.................. 3092
||| | |||| || | |||| |
fj12009 4442 CTTAGACATCCAAAACTAATCAATGCTGAGGTGGCTAAATACCTAGCCTT 4491
4851 ----+----*----+----*----+----*----+ 4885
mia34065 3093 ................................... 3093
fj12009 4492 TTACATGTAAACCTGTCTGCAAAATTAGCTTTTTT 4526