Comparison of KIAA cDNA sequences between mouse and human (KIAA0512)
<<Original sequence data>>
mouse mKIAA0512 (mia09016) length: 3666 bp, CDS: 787 - 3285
human KIAA0512 (hf00239) length: 2620 bp, CDS: 265 - 2397
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 142 - 789 226 147 39.4
CDS: 790 - 3289 1641 399 19.6
3'UTR: 3290 - 3590 157 59 27.3
amino acid
CDS: 790 - 3289 519 158 23.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mia09016 1 CACAAAGGGAGAAGGGGCTACTTAGGGCCTCAGAGGTCACAAAGTCCCTG 50
hf00239 1 .................................................. 1
51 ----+----*----+----*----+----*----+----*----+----* 100
mia09016 51 CATGATTGACAGGACCTGCTGTGGTGGGAAGAGGTAGGAGTAGGGTAAAG 100
hf00239 1 .................................................. 1
101 ----+----*----+----*----+----*----+----*----+----* 150
mia09016 101 GAGGGGGCTTGTGCTCTTGGTGGGAGTGGAATTCGGGGACCCAAGCTTAC 150
||| ||
hf00239 1 .........................................CAACTCTAT 9
151 ----+----*----+----*----+----*----+----*----+----* 200
mia09016 151 TGGTGATGCGGGTCCCACGTGACCAAGAGAGCTGACGTGGGCAAAGGTAC 200
|| | | | || | | || || || | |
hf00239 10 TGCGCAGCTCGCTGCCGTGCGTTTAACCCAGGCGAGGAG........... 48
201 ----+----*----+----*----+----*----+----*----+----* 250
mia09016 201 TTAAAGCCTTACGGCCATCCCTGCCATCTTCCTCCGGGTACCAACGCTAT 250
hf00239 49 .................................................. 49
251 ----+----*----+----*----+----*----+----*----+----* 300
mia09016 251 TAAAGCTGCGGTCAGTCTAGCGAGACAGAGAAAATTCCCTCAGAACTGGC 300
||| |||||||||||| |||| ||
hf00239 49 .....................GAGGAGGAGAAAATTCCCCCAGATTCGGG 77
301 ----+----*----+----*----+----*----+----*----+----* 350
mia09016 301 CAGACACCTTGTTGCCAAAACCCTGCTCCCTCCCCTCCCTTCCCTCCCCT 350
||| | || |
hf00239 78 CAGGC........................................CCGCA 87
351 ----+----*----+----*----+----*----+----*----+----* 400
mia09016 351 CCCCTCCCAGCCCCCTGCCTTTCTAGGGCGCTAGCAAATGGGTGTGCCAG 400
|||| | | |||| || |||
hf00239 88 CCCCACATTCCGTCCTGTTTTGAGAGG....................... 114
401 ----+----*----+----*----+----*----+----*----+----* 450
mia09016 401 CTTCTGTGGGAGAGATGGAGCATTTGGAGCTGTACGGGCTTCACAGGCTG 450
|
hf00239 115 ................................................AG 116
451 ----+----*----+----*----+----*----+----*----+----* 500
mia09016 451 GGGGACCGTGAGAGAATCTGGTATTAGACCGCCATGCTAACTGCCAAGCT 500
| || | || | || | | | | || | | | | ||
hf00239 117 GAGGGAAGAGAAATAAACGTGGCAGCGCATAGAAGGCCAGCAGGGAGACT 166
501 ----+----*----+----*----+----*----+----*----+----* 550
mia09016 501 GCTCTCCAGACACCTGCGGCCCAC.CATCCCTTCA.CCCTGGTCCTTTTG 548
||| ||||||||||| |||||||| || || |||| ||| ||| |||
hf00239 167 GCTTTCCAGACACCTCCGGCCCACACAGCCGTTCACCCCCCGTCTTTTCA 216
551 ----+----*----+----*----+----*----+----*----+----* 600
mia09016 549 GCCCTGAAAAGGGAATTCGGGTTCTTAGTCTGCCCCTGCAGTCTGTATTC 598
| |||| ||| |||||||||
hf00239 217 GTCCTGGAAAAGGAATTCGG.............................. 236
601 ----+----*----+----*----+----*----+----*----+----* 650
I R G R
mia09016 599 CTGCCCTTCAACCCGTCCTCAGCAGGAAACTCTGGCCTAATTCGAGGAAG 648
| ||||| || | ||| |||| | || | || |||
hf00239 237 ...........TCTGTCCTTAGGATGAAGCTCTAACTGAACTGAAGTAAG 275
T E V R
651 ----+----*----+----*----+----*----+----*----+----* 700
I Q S S E F L Q T P L S *
mia09016 649 GATACAGAGCTCTGAATTCTTGCAGACACCTTTGTCCTGGAGTGTCCTTT 698
|| | | ||| ||||| ||| || | | ||||
hf00239 276 GAGAAACAGCCTTGAATCTTTGGAGGGTCTGTCTTCCT............ 313
R N S L E S L E G L S S F
701 ----+----*----+----*----+----*----+----*----+----* 750
G A V W N C
mia09016 699 TTGGTGCAGGGAAGGGGCCGTGTGGAACTGTCTTTATCCGTCTACCTTGA 748
|||| |||| |||||
hf00239 314 ...........TTTGGGCTCTGTGCAACTG.................... 332
W A L C N C
751 ----+----*----+----*----+----*----+----*----+----* 800
C N C G T V E I V P D P R
mia09016 749 GGCTCTGCAACTGCGAGCACAGTGGAAATTGTTCCTGATCCCAGGAAGCT 798
| || || | | | | | | ||| || || |||||||||
hf00239 333 ....CAGCTACAGTG.GAAAAAAGCAAACTGCTCTTGATCCCAG...... 371
S Y S G K K Q T A L D P R
801 ----+----*----+----*----+----*----+----*----+----* 850
L S F S L R R T F R P E L E
mia09016 799 GGTCCAGCTCAGCTTGCAGCCTCCGAAGAACTTTCAGACCCGAGCTTGAG 848
|| | || | |||||| | ||||||| | || | || ||
hf00239 372 ......GCCCTGCCT.AAGCCTCAGCAGAACTTGTAAGCCTAAACTGAAG 414
P C L S L S R T C K P K L K
851 ----+----*----+----*----+----*----+----*----+----* 900
I L D W T - Y T F R L S K P V P
mia09016 849 ATCCTCGATTGGACTGG..TGTATACATTTCGCTTAAGCAAGCCAGTTCC 896
| ||| |||| | | || | || ||||||||| ||||||||
hf00239 415 AGTCTCACCCGGACGAGCAGGCATCCCTTAACCTTAAGCAATCCAGTTCC 464
S L T R T S R H P L T L S N P V P
901 ----+----*----+----*----+----*----+----*----+----* 950
Q P G S E T H S R C T M S R A R D
mia09016 897 ACAACCTGGATCAGAGACTCACTCCAGGTGTACCATGAGCCGAGCTCGGG 946
|| |||||||||| || | || |||| || ||||||||||| | |||||
hf00239 465 ACGCCCTGGATCAGTGAATAACCCCAGCTGCACCATGAGCCGCGTTCGGG 514
R P G S V N N P S C T M S R V R D
951 ----+----*----+----*----+----*----+----*----+----* 1000
A G C V A A G I V I G A S A W Y
mia09016 947 ATGCTGGCTGTGTAGCTGCTGGAATAGTGATTGGGGCGAGTGCCTGGTAC 996
|||||||||||||||| || || |||||||| ||||| |||||||||||
hf00239 515 ATGCTGGCTGTGTAGCGGCGGGGATAGTGATAGGGGCTGGTGCCTGGTAC 564
A G C V A A G I V I G A G A W Y
1001 ----+----*----+----*----+----*----+----*----+----* 1050
C V Y K Y T R G K D Q K K K R L T
mia09016 997 TGTGTCTACAAATATACTAGGGGAAAAGACCAGAAGAAGAAGAGGCTGAC 1046
|||||||||||||| || ||||| | |||||||| |||||||| || |
hf00239 565 TGTGTCTACAAATACACCAGGGGGAGAGACCAGACCAAGAAGAGAATGGC 614
C V Y K Y T R G R D Q T K K R M A
1051 ----+----*----+----*----+----*----+----*----+----* 1100
K P K N R A S V G T G S R A R A G
mia09016 1047 CAAGCCCAAGAACCGGGCCTCTGTGGGTACTGGAAGCAGGGCTAGAGCGG 1096
||||||||| |||||||| | || |||||| |||||||||||| |
hf00239 615 CAAGCCCAAAAACCGGGCTGTGGCTGGGACTGGAGCCAGGGCTAGAGCTG 664
K P K N R A V A G T G A R A R A G
1101 ----+----*----+----*----+----*----+----*----+----* 1150
L R A G F T I D L G P G F S P P
mia09016 1097 GCCTCAGAGCTGGATTCACAATTGACCTTGGGCCAGGATTCAGTCCCCCA 1146
| || ||||| ||||||||||| ||||||||| |||||||||||||||||
hf00239 665 GGCTAAGAGCCGGATTCACAATCGACCTTGGGTCAGGATTCAGTCCCCCA 714
L R A G F T I D L G S G F S P P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
N P V D I E I M N K A Q G E A S N
mia09016 1147 AACCCCGTCGATATTGAGATAATGAACAAGGCCCAAGGAGAAGCCTCCAA 1196
| ||| ||| | ||| | | ||| |||||| | ||||||||
hf00239 715 ACCCCAGTCCGTGCTGAAGCAGAGGACAGGGCCCAGGATGAAGCCTCTGC 764
T P V R A E A E D R A Q D E A S A
1201 ----+----*----+----*----+----*----+----*----+----* 1250
L A T T V A E E V A P A A P S P K
mia09016 1197 TCTTGCCACCACCGTAGCTGAAGAAGTGGCACCAGCTGCACCCAGTCCTA 1246
||| | ||| | |||||| | |||||| ||||||||| |||| ||
hf00239 765 TCTGGACACAGTTGGAGCTGAGGCAGTGGCCCCAGCTGCATCCAGCGCTG 814
L D T V G A E A V A P A A S S A E
1251 ----+----*----+----*----+----*----+----*----+----* 1300
V Q N G A E S K V Q E L N G A K
mia09016 1247 AGGTTCAGAATGGGGCAGAAAGTAAGGTCCAGGAGTTAAATGGGGCTAAA 1296
||| ||||| |||||||| ||| ||| ||| ||| | |||| ||
hf00239 815 AGGCTCAGAGTGGGGCAGGCAGTCAGGCCCAAGAGGCAGATGGAGCCGGG 864
A Q S G A G S Q A Q E A D G A G
1301 ----+----*----+----*----+----*----+----*----+----* 1350
T E A N L E S V V M P S A T C T V
mia09016 1297 ACTGAGGCTAATCTGGAATCAGTAGTCATGCCTTCAGCTACCTGTACAGT 1346
|| | |||| ||||||||||| | || || | | | || |
hf00239 865 GTTGGGCCTAAGGCCGAATCAGTAGTTGGGGCTGCAATGGCTTCTGCAAT 914
V G P K A E S V V G A A M A S A I
1351 ----+----*----+----*----+----*----+----*----+----* 1400
T P P P K V A G G L T A A E A P E
mia09016 1347 TACACCTCCTCCCAAGGTGGCAGGGGGTCTCACTGCTGCAGAGGCTCCAG 1396
|||| |||||| |||| ||| || || |||||||| || || |
hf00239 915 AGCACCACCTCCCGGGGTGACAGAGGCCCTTGGGGCTGCAGAAGCCCCTG 964
A P P P G V T E A L G A A E A P A
1401 ----+----*----+----*----+----*----+----*----+----* 1450
I I G A P K V L E A P S T T E A
mia09016 1397 AAATCATAGGAGCTCCCAAAGTGCTGGAAGCTCCCAGCACCACAGAGGCT 1446
||| ||| |||||||||||| ||||||||||| | ||| ||
hf00239 965 CAATGGCAGGGGCTCCCAAAGTGGCAGAAGCTCCCAGAGAAGCGGAGACT 1014
M A G A P K V A E A P R E A E T
1451 ----+----*----+----*----+----*----+----*----+----* 1500
S G A A Q
mia09016 1447 TCTGGGGCAGTAGCAGCCCCTGGACCAACAGTATCTCCAATGATAGCCCA 1496
|| |||| |||
hf00239 1015 TCCAGGGC....................................AGCGGT 1028
S R A A V
1501 ----+----*----+----*----+----*----+----*----+----* 1550
T P G P V V P
mia09016 1497 GACTCCTGGGCCAGTGGTACCTTCGCCAACAATAGTGTCTACTGGGCCAG 1546
| |||||||| ||||||| ||
hf00239 1029 GCCTCCTGGGACAGTGGTGCC............................. 1049
P P G T V V P
1551 ----+----*----+----*----+----*----+----*----+----* 1600
P W A V A H P G A V Q S P G
mia09016 1547 CAGCAATTCCCTGGGCAGTGGCACATCCCGGGGCTGTCCAGTCTCCTGGG 1596
| || || | |||| | | || | || |||||||
hf00239 1050 .......TACCGAAGCGGCAGCACCCACTGAGGTGACCGAGGGTCCTGGG 1092
T E A A A P T E V T E G P G
1601 ----+----*----+----*----+----*----+----*----+----* 1650
P A V P P M A V Q S L V P A A P S
mia09016 1597 CCAGCAGTACCTCCCATGGCAGTCCAATCTCTTGTGCCAGCAGCACCTTC 1646
||||| |||| ||| || || || ||| | | ||| | ||| |
hf00239 1093 GTAGCAGCACCTACCAAGGTAGCTGAAGCTCCCGGGGTGGCATCGCCTAC 1142
V A A P T K V A E A P G V A S P T
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mia09016 1647 CTGGGCAGTAGTAGCACCTCCTGGGGCAGTCTACATTCCTGTGGCAGCCC 1696
|
hf00239 1143 C................................................. 1143
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mia09016 1697 ACTTTGCTGGGCCAGCAGCAGCTTCCAGGGTAACCCAGTCTCCTGGGACG 1746
hf00239 1144 .................................................. 1144
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mia09016 1747 GTGATACCTCCCCTTCCACCCCCATCATCAGTACTTCCCAGGGGAGTCCC 1796
hf00239 1144 .................................................. 1144
1801 ----+----*----+----*----+----*----+----*----+----* 1850
G A A V H P V
mia09016 1797 ATCAGTACCTGGCAGAACAGTCCAGTCTCCTGGGGCAGCCGTGCATCCTG 1846
| |||||| | | |||||
hf00239 1144 ...............................GAGGCAGCTGAGGCTCCTG 1162
E A A E A P V
1851 ----+----*----+----*----+----*----+----*----+----* 1900
A A Q S T G V V V P P R A V Q Y
mia09016 1847 TGGCAGCCCAATCTACTGGGGTAGTAGTGCCTCCTAGGGCAGTACAGTAT 1896
|| | || ||||||||| | || ||| || |||| | | ||| |
hf00239 1163 TGCCCGCAACGCCTACTGGGGCTGCAGCACCTACTGGGGCTGCAGAGTCT 1212
P A T P T G A A A P T G A A E S
1901 ----+----*----+----*----+----*----+----*----+----* 1950
S G T S G
mia09016 1897 TCTGGGGCAGCAGTGACTTCTGGAGGGGCAGCAGTACCTTCCGGAGGGGC 1946
|||| ||||||||
hf00239 1213 CCTGG.........AACTTCTGG........................... 1226
P G T S G
1951 ----+----*----+----*----+----*----+----*----+----* 2000
T Q R T A
mia09016 1947 AGCAACTCCTAGGGCAGCAGCATCTACCCAGAGGACAGCAAGCACAGAAG 1996
| ||| || ||||
hf00239 1227 ........................TTCCCCTAGAACAG............ 1240
S P R T A
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mia09016 1997 TCATGCAGGTCCCTAGGGTGGCAGCAGCTACTGAAGCCACAGAGACTCCT 2046
hf00239 1241 .................................................. 1241
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mia09016 2047 AGAATAGGAACACCTGCCATGGTAGCTGAGGCTTCTCTGCCCGTGCATTC 2096
hf00239 1241 .................................................. 1241
2101 ----+----*----+----*----+----*----+----*----+----* 2150
E N P G T S A
mia09016 2097 TGGGGCTGCAGAGAATCCTGGGACTTCAGGGTCCTCTAAGACAGCAGCCA 2146
| | | |||||| || ||||
hf00239 1241 ........CGGTGGTTCCTGGAACATCAG..................... 1261
V V P G T S A
2151 ----+----*----+----*----+----*----+----*----+----* 2200
G K K A A P G A H T G A I P K A
mia09016 2147 CTGGCAAGAAAGCAGCCCCTGGAGCTCACACTGGGGCTATACCTAAAGCT 2196
||| |||||||||| ||||||| |||||||||||||||||||| |||||
hf00239 1262 CTGCCAAGAAAGCAACCCCTGGGGCTCACACTGGGGCTATACCGAAAGCC 1311
A K K A T P G A H T G A I P K A
2201 ----+----*----+----*----+----*----+----*----+----* 2250
G S A T G A V P K G G G K G G N
mia09016 2197 GGGTCAGCCACTGGAGCTGTACCCAAAGGTGGAGGAGGCAAGGGTGGAAA 2246
||||| |||||||| |||||||||||| ||||||||||||| ||
hf00239 1312 ACATCAGCGACTGGAGCGGTACCCAAAGGT...GGAGGCAAGGGTGTAAC 1358
T S A T G A V P K G G G K G V T
2251 ----+----*----+----*----+----*----+----*----+----* 2300
K N R S G G K G K N R K N K V D V
mia09016 2247 CAAGAACCGGAGTGGAGGCAAGGGCAAAAATAGGAAGAACAAGGTTGATG 2296
|| | ||||| ||| ||||||||||| | ||| | ||| ||||| |
hf00239 1359 CAGGTCCCGGAATGGGGGCAAGGGCAAGGGCAAGAAAAGCAAAGTTGAAG 1408
R S R N G G K G K G K K S K V E V
2301 ----+----*----+----*----+----*----+----*----+----* 2350
D E L G M G F R P G D G A A A A
mia09016 2297 TGGATGAGTTGGGGATGGGTTTCCGTCCTGGTGATGGGGCTGCAGCTGCG 2346
| || || |||||||||| ||||||||||| |||||||||||||| ||
hf00239 1409 TAGACGAACTGGGGATGGGCTTCCGTCCTGGAGATGGGGCTGCAGCAGCT 1458
D E L G M G F R P G D G A A A A
2351 ----+----*----+----*----+----*----+----*----+----* 2400
A A A S A N G G Q A F L A E I P E
mia09016 2347 GCGGCGGCTTCTGCTAATGGGGGGCAGGCCTTCCTAGCAGAGATTCCGGA 2396
|| || || ||||||||||| || ||||| ||||| |||||| | || ||
hf00239 1459 GCTGCAGCCTCTGCTAATGGCGGACAGGCTTTCCTGGCAGAGGTCCCTGA 1508
A A A S A N G G Q A F L A E V P D
2401 ----+----*----+----*----+----*----+----*----+----* 2450
S E E G E S G W T D T E S D S D S
mia09016 2397 ATCTGAGGAAGGGGAATCTGGGTGGACTGACACAGAGTCCGATTCTGACT 2446
|||||||||||||| || |||||||||||||||||||| ||||| ||||
hf00239 1509 TTCTGAGGAAGGGGAGTCCGGGTGGACTGACACAGAGTCAGATTCAGACT 1558
S E E G E S G W T D T E S D S D S
2451 ----+----*----+----*----+----*----+----*----+----* 2500
E P D V P Q R G K G K R T I P M
mia09016 2447 CTGAGCCGGACGTCCCGCAGAGAGGGAAGGGGAAGAGAACCATTCCCATG 2496
||||||| || || || ||||||| ||| | ||| || || |||||
hf00239 1559 CTGAGCCCGAGACCCAGCGCAGAGGGAGGGGAAGAAGACCCGTTGCCATG 1608
E P E T Q R R G R G R R P V A M
2501 ----+----*----+----*----+----*----+----*----+----* 2550
H K R P F P Y E I D E I L G V R D
mia09016 2497 CATAAGCGCCCCTTTCCATATGAAATTGATGAGATCCTAGGTGTTCGAGA 2546
|| |||||||||||||| ||||||||||||||||| || ||||| || ||
hf00239 1609 CAGAAGCGCCCCTTTCCTTATGAAATTGATGAGATTCTGGGTGTCCGCGA 1658
Q K R P F P Y E I D E I L G V R D
2551 ----+----*----+----*----+----*----+----*----+----* 2600
L R K V L A L L Q K S D D P F I Q
mia09016 2547 TCTCAGGAAAGTCCTAGCCTTGCTTCAGAAGTCAGATGATCCCTTCATTC 2596
||||||||| ||||| |||||||||||||| || |||||||| ||||| |
hf00239 1659 TCTCAGGAAGGTCCTTGCCTTGCTTCAGAAATCTGATGATCCTTTCATCC 1708
L R K V L A L L Q K S D D P F I Q
2601 ----+----*----+----*----+----*----+----*----+----* 2650
Q V A L L T L S N N A N Y S C N
mia09016 2597 AGCAAGTAGCCCTGCTCACCCTGAGCAACAATGCCAATTATTCATGTAAT 2646
| || ||||| ||||||| |||||||||||||||||||||||||| |||
hf00239 1709 AACAGGTAGCTTTGCTCACTCTGAGCAACAATGCCAATTATTCATGCAAT 1758
Q V A L L T L S N N A N Y S C N
2651 ----+----*----+----*----+----*----+----*----+----* 2700
Q E T I R K L G G L P I I A N M I
mia09016 2647 CAAGAAACAATCCGAAAGTTGGGAGGCCTCCCAATTATTGCAAACATGAT 2696
||||| |||||||| || ||||||||||||||||||||||||||||||||
hf00239 1759 CAAGAGACAATCCGCAAATTGGGAGGCCTCCCAATTATTGCAAACATGAT 1808
Q E T I R K L G G L P I I A N M I
2701 ----+----*----+----*----+----*----+----*----+----* 2750
N K T D P H I K E K A L M A M N N
mia09016 2697 CAACAAAACTGACCCCCACATTAAGGAAAAAGCCTTAATGGCCATGAATA 2746
|||||||||||| || ||||||||||||||||||||||||||||||||||
hf00239 1809 CAACAAAACTGATCCACACATTAAGGAAAAAGCCTTAATGGCCATGAATA 1858
N K T D P H I K E K A L M A M N N
2751 ----+----*----+----*----+----*----+----*----+----* 2800
L S E N Y E N Q G R L Q V Y M N
mia09016 2747 ACCTGAGTGAAAATTATGAAAACCAGGGCAGACTTCAGGTGTACATGAAT 2796
|||||||||| ||||||||||| |||||| | ||||||||||||||||||
hf00239 1859 ACCTGAGTGAGAATTATGAAAATCAGGGCCGGCTTCAGGTGTACATGAAT 1908
L S E N Y E N Q G R L Q V Y M N
2801 ----+----*----+----*----+----*----+----*----+----* 2850
K V M D D I M A S N L N S A V Q V
mia09016 2797 AAAGTGATGGATGATATTATGGCTTCTAACCTGAACTCAGCGGTACAGGT 2846
||||||||||||||||| ||||| ||||||||||||||||| || || ||
hf00239 1909 AAAGTGATGGATGATATCATGGCCTCTAACCTGAACTCAGCAGTTCAAGT 1958
K V M D D I M A S N L N S A V Q V
2851 ----+----*----+----*----+----*----+----*----+----* 2900
V G L K F L T N M T I T N D Y Q H
mia09016 2847 AGTTGGGCTAAAATTTTTAACAAACATGACTATTACTAATGACTACCAGC 2896
|||||| ||||||||| ||||||||||||||||||||||||||||||| |
hf00239 1959 AGTTGGACTAAAATTTCTAACAAACATGACTATTACTAATGACTACCAAC 2008
V G L K F L T N M T I T N D Y Q H
2901 ----+----*----+----*----+----*----+----*----+----* 2950
L L V N S I A N F F R L L S Q G
mia09016 2897 ACCTGCTTGTCAATTCCATTGCCAACTTTTTCCGCTTGTTATCTCAGGGG 2946
|||||||||||||||||||||| ||||||||||| ||| ||||||||||
hf00239 2009 ACCTGCTTGTCAATTCCATTGCAAACTTTTTCCGTTTGCTATCTCAGGGA 2058
L L V N S I A N F F R L L S Q G
2951 ----+----*----+----*----+----*----+----*----+----* 3000
G G K I K V E I L K I L S N F A E
mia09016 2947 GGTGGAAAAATCAAGGTTGAGATTCTGAAAATACTTTCAAACTTTGCTGA 2996
|||||||||||||||||||||||| ||||||| ||||| || ||||||||
hf00239 2059 GGTGGAAAAATCAAGGTTGAGATTTTGAAAATCCTTTCGAATTTTGCTGA 2108
G G K I K V E I L K I L S N F A E
3001 ----+----*----+----*----+----*----+----*----+----* 3050
N P D M L K K L L G T Q V P S S F
mia09016 2997 AAATCCGGACATGCTAAAGAAACTTCTCGGTACCCAGGTGCCGTCATCAT 3046
|||||| || ||| | |||||||||||| ||||||| ||||| ||||||
hf00239 2109 AAATCCAGATATGTTGAAGAAACTTCTCAGTACCCAAGTGCCAGCATCAT 2158
N P D M L K K L L S T Q V P A S F
3051 ----+----*----+----*----+----*----+----*----+----* 3100
S S L Y N S Y V E S E I L I N A
mia09016 3047 TTAGTTCCCTTTATAATTCTTATGTGGAATCAGAAATTCTTATTAATGCC 3096
|||||||||| ||||||||||| |||||||||||||| ||||||||||||
hf00239 2159 TTAGTTCCCTCTATAATTCTTACGTGGAATCAGAAATCCTTATTAATGCC 2208
S S L Y N S Y V E S E I L I N A
3101 ----+----*----+----*----+----*----+----*----+----* 3150
L T L F E I I F D N L R A E V F N
mia09016 3097 CTTACTCTATTTGAGATTATCTTCGACAACCTCAGAGCAGAAGTGTTCAA 3146
|||||||||||||||||||||| ||||| ||||||||||||||||| ||
hf00239 2209 CTTACTCTATTTGAGATTATCTATGACAATCTCAGAGCAGAAGTGTTTAA 2258
L T L F E I I Y D N L R A E V F N
3151 ----+----*----+----*----+----*----+----*----+----* 3200
Y R E F N K G S L F Y L C T T S G
mia09016 3147 CTACAGGGAATTCAACAAGGGGTCCCTGTTTTACTTATGCACTACATCTG 3196
||| || |||||||| || || ||||| ||||||||||||||||||||||
hf00239 2259 CTATAGAGAATTCAATAAAGGTTCCCTTTTTTACTTATGCACTACATCTG 2308
Y R E F N K G S L F Y L C T T S G
3201 ----+----*----+----*----+----*----+----*----+----* 3250
V C V K K I R A L A N H H D L L
mia09016 3197 GGGTGTGTGTGAAGAAAATTCGAGCCTTAGCAAATCACCACGACCTCTTG 3246
| |||||||| ||||||||| ||||||||||||||||||| ||||||||
hf00239 2309 GAGTGTGTGTTAAGAAAATTAGAGCCTTAGCAAATCACCATGACCTCTTA 2358
V C V K K I R A L A N H H D L L
3251 ----+----*----+----*----+----*----+----*----+----* 3300
V K V K V I K L V N K F *
mia09016 3247 GTGAAAGTGAAAGTTATAAAGCTGGTAAACAAATTCTGATT.GATCTGTG 3295
|||||||||||||||||||| || || |||||||||||||| | | |||
hf00239 2359 GTGAAAGTGAAAGTTATAAAACTAGTGAACAAATTCTGATTGGTTATGTA 2408
V K V K V I K L V N K F *
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mia09016 3296 CCCTCAAGATGTGTG.....ATCTCTCGGTTTTACACTCGGGAAGCATTA 3340
|| |||| | || || || | |||| || | |||||| ||
hf00239 2409 CCGTCAAAAGACTTGAAGAAATTTCATGATTTTGCAGTGTGGAAGCGTTG 2458
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mia09016 3341 ACAGTGAGACACTATTGTTTTTCTACTTGTGTGTGTAGTACAGGAAT.TA 3389
| | | | || || ||||| ||||| | ||||| ||| ||
hf00239 2459 AAAATTGAAAGTTACTGCTTTTCCACTTGCTCATATAGTAAAGGGATCCT 2508
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mia09016 3390 TTCAGATGCCACGTTTGAATA.......ATTCAGAGTGATGTTATCTGTG 3432
||||| ||||| ||||||| || |||||||||||||||||||
hf00239 2509 TTCAGCTGCCAGTGTTGAATAATGTATCATCCAGAGTGATGTTATCTGTG 2558
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mia09016 3433 ATAGTCACCAGCTTTAAGCTGAACCATTTTCTGAATACCAAATAGTCCCG 3482
| |||||||||||||||||||||||||||| |||||||||||||
hf00239 2559 ACAGTCACCAGCTTTAAGCTGAACCATTTTATGAATACCAAATA...... 2602
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mia09016 3483 TAGTCCTGTAGTCCTGTGGTTTGACTTGTGCTGCTTGGGTGGGATATTTT 3532
| |
hf00239 2603 .A.......A........................................ 2604
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mia09016 3533 CCCTGGGTCCTCTATGTGAACTAATAGCAATCTTGTTCGTGAATGGCCTA 3582
||| |||||| |
hf00239 2605 ........................TAGACCTCTTGTACTG.......... 2620
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mia09016 3583 CTCAGCTCTTACTTGTTTTGACTTGAATTTTGTCACCAAAGACTTCATAT 3632
hf00239 2621 .................................................. 2621
3651 ----+----*----+----*----+----*---- 3684
mia09016 3633 GTGTACCATCAATAAAGTGTATGTTGCAAATGGC 3666
hf00239 2621 .................................. 2621