FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0965.ptfa, 159 aa vs ./tmplib.26680 library 1768858 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.9549+/-0.00419; mu= 14.8348+/- 0.282 mean_var=84.7826+/-20.078, 0's: 0 Z-trim: 16 B-trim: 0 in 0/36 Lambda= 0.1393 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0807 ( 1432 res) mbg07407 (1432) 276 65 1.1e-11 mKIAA0973 ( 1202 res) mbg08419 (1202) 257 61 1.4e-10 mKIAA0096 ( 750 res) mbh04151 ( 750) 174 44 1.1e-05 mFLJ00113 ( 442 res) mtj02051 ( 442) 139 37 0.0011 mKIAA0968 ( 487 res) mbg13747 ( 487) 139 37 0.0011 mKIAA4163 ( 536 res) mfj30170 ( 536) 139 37 0.0012 mKIAA0787 ( 419 res) mbg06488 ( 419) 136 36 0.0016 mKIAA0623 ( 1056 res) mbg01004 (1056) 136 37 0.0026 >>mKIAA0807 ( 1432 res) mbg07407 (1432 aa) initn: 225 init1: 225 opt: 276 Z-score: 302.4 bits: 65.3 E(): 1.1e-11 Smith-Waterman score: 276; 38.983% identity (44.231% ungapped) in 118 aa overlap (1-111:348-458) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV ::..:.:.::.:.: :: ..::.: . .: mKIAA0 REFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV 320 330 340 350 360 370 40 50 60 70 80 mKIAA0 MS----WKE-TLAFPPEVPVSEKAKDLILRFCTDSE-NRIGNGGVEEIKGHPFFEGVDW- .: : : :.::. :.:: .. .. .:.:.... :.: :::: :.:: mKIAA0 ISDEIVWPEGDDALPPD------AQDLTSKLLHQNPLERLGTSSAYEVKQHPFFMGLDWT 380 390 400 410 420 430 90 100 110 120 130 140 mKIAA0 GHIRERPAAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEG : .:.. :: ...: :::: :: : mKIAA0 GLLRQKAEFIP-QLESEDDTSYFDTRSERYHHVDSEDEEEVSEDGCLEIRQFSSCSPRFS 440 450 460 470 480 490 >>mKIAA0973 ( 1202 res) mbg08419 (1202 aa) initn: 251 init1: 227 opt: 257 Z-score: 282.5 bits: 61.4 E(): 1.4e-10 Smith-Waterman score: 257; 37.879% identity (43.103% ungapped) in 132 aa overlap (1-125:252-374) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV ::..:.:.::.:.: :: ..::.: . .: mKIAA0 REFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV 230 240 250 260 270 280 40 50 60 70 80 mKIAA0 MS----WKE-TLAFPPEVPVSEKAKDLILRFC-TDSENRIGNGGVEEIKGHPFFEGVDW- .: : : :.: . :. :: . :. :.: ::. :.: : ::. .:: mKIAA0 ISDDILWPEGDEALPTD------AQLLISSLLQTNPLVRLGAGGAFEVKQHSFFRDLDWT 290 300 310 320 330 90 100 110 120 130 140 mKIAA0 GHIRERPAAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEG : .:.. :: ...: :::: :: .:: . : . : : mKIAA0 GLLRQKAEFIP-HLESEDDTSYFDT--RSDRYHHVNSYDEDDTTEEEPVEIRQFSSCSPR 340 350 360 370 380 390 150 mKIAA0 LTQRGSIPTYMKAGKL mKIAA0 FSKVYSSMEQLSQHEPKTPVSASGASKRDPSAKGPEEKVAGKREGLGGLTLREKTWRGGS 400 410 420 430 440 450 >>mKIAA0096 ( 750 res) mbh04151 (750 aa) initn: 149 init1: 99 opt: 174 Z-score: 194.4 bits: 44.4 E(): 1.1e-05 Smith-Waterman score: 174; 39.506% identity (42.667% ungapped) in 81 aa overlap (2-82:201-275) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKVM ::::::.. .. : ::: . .:: .: mKIAA0 KKLTTSCGSLAYSAPEILLGDEYDAPAVDIWSLGVILFMLVCGQPPFQEANDSETLTMIM 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 SWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERPA . : :. ::.: : .::: :. . .: ...:::..::...::: mKIAA0 DCKYTV--PPRV--SAGCRDLITRMLQRDPKR--RASLEEIESHPWLQGVDPSPATKYNI 240 250 260 270 280 100 110 120 130 140 150 mKIAA0 AIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSIP mKIAA0 PLVSYKNLSEEEHNSIIQRMVLGDIADRDAIVEALETNRYNHITATYFLLAERILREKQE 290 300 310 320 330 340 >>mFLJ00113 ( 442 res) mtj02051 (442 aa) initn: 95 init1: 95 opt: 139 Z-score: 158.7 bits: 37.0 E(): 0.0011 Smith-Waterman score: 139; 23.926% identity (26.000% ungapped) in 163 aa overlap (2-157:265-421) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKVM :.:::... :: : :: . ::: .::. mFLJ00 DLLKDQRGSPAYISPDVLSGRPYRGKPSDMWALGVVLFTMLYGQFPFYDSIPQELFRKIK 240 250 260 270 280 290 40 50 60 70 80 90 mKIAA0 SWKETLAFPPEVPVSEKAKDLILRFCT-DSENRIGNGGVEEIKGHPFFEGVDWGHIRERP . . :. : . :::.. :: .. . : ..:.. . : : . . ..: . mFLJ00 AAEYTI--PEDGRVSENTVCLIRKLLVLDPQQRLAAADVLEALSAII---ASWQSLSSLS 300 310 320 330 340 100 110 120 130 140 mKIAA0 AAIPIEIRSIDDT-SNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLT---- . . . . .::: :. :. :. . . . .: .. .. . . :. . mFLJ00 GPLQV-VPDIDDQMSSSDSSQEAKVTEECSQYEFENYMRQQLLLAEEKSSIHEARAWVPK 350 360 370 380 390 400 150 mKIAA0 -QRGSIPTYMKAGKL : ::.: . :. mFLJ00 RQFGSMPPVRRLGHDAQPMTSLDTAILAQRYLRK 410 420 430 440 >>mKIAA0968 ( 487 res) mbg13747 (487 aa) initn: 119 init1: 119 opt: 139 Z-score: 158.3 bits: 37.1 E(): 0.0011 Smith-Waterman score: 139; 33.766% identity (35.616% ungapped) in 77 aa overlap (2-77:206-279) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKVM :. :::.: .:.:.::: .: .. :... mKIAA0 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 SWKETLAFPPEVPVSEKAKDLILRFCT-DSENRIGNGGVEEIKGHPFFEGVDWGHIRERP . . : :. .::::: .. : . .:: ..: .: ::.. mKIAA0 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT--AAEALK-HPWISHRSTVASCMHR 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI mKIAA0 QETVDCLKKFNARRKLKGAILTTMLATRNFSGGKSGGNKKNDGVKESSESTNTTIEDEDT 300 310 320 330 340 350 >>mKIAA4163 ( 536 res) mfj30170 (536 aa) initn: 119 init1: 119 opt: 139 Z-score: 157.9 bits: 37.2 E(): 0.0012 Smith-Waterman score: 139; 28.972% identity (31.959% ungapped) in 107 aa overlap (2-107:222-319) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKVM :. :::.: .:.:.::: .: .. :... mKIAA4 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIK 200 210 220 230 240 250 40 50 60 70 80 90 mKIAA0 SWKETLAFPPEVPVSEKAKDLILRFCT-DSENRIGNGGVEEIKGHPFFEGVDWGHIRERP . . : :. .::::: .. : . .:: . : .: :: : : mKIAA4 AGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITAS--EALK-HP------WICQRSTV 260 270 280 290 300 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :.. . ...: ..:. mKIAA4 ASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAKSLLKKPDGVKINNKANVVTS 310 320 330 340 350 360 >>mKIAA0787 ( 419 res) mbg06488 (419 aa) initn: 82 init1: 53 opt: 136 Z-score: 155.7 bits: 36.4 E(): 0.0016 Smith-Waterman score: 136; 36.364% identity (39.437% ungapped) in 77 aa overlap (2-77:168-239) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKVM :..:: .: ...: :: .: . . :. mKIAA0 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIK 140 150 160 170 180 190 40 50 60 70 80 90 mKIAA0 SWKETLAFPPEVPVSEKAKDLILRFCT-DSENRIGNGGVEEIKGHPFFEGVDWGHIRERP : ..: :: . ..: :::: :. . :.:: : ::: ::. mKIAA0 S--QALEFPDQPDIAEDLKDLITRMLDKNPESRIV---VPEIKLHPWVTRHGAEPLPSED 200 210 220 230 240 250 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI mKIAA0 ENCTLVEVTEEEVENSVKHIPSLATVILVKTMIRKRSFGNPFEGSRREERSLSAPGNLLT 260 270 280 290 300 310 >>mKIAA0623 ( 1056 res) mbg01004 (1056 aa) initn: 161 init1: 104 opt: 136 Z-score: 151.7 bits: 37.0 E(): 0.0026 Smith-Waterman score: 137; 25.000% identity (27.826% ungapped) in 128 aa overlap (2-127:217-333) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKVM ::.:...:. :.: ::: ...::. : mKIAA0 NTMAATLCGSPMYMAPEVIMSQHYDAKADLWSIGTVIYQCLVGKPPFQANSPQDLR---M 190 200 210 220 230 240 40 50 60 70 80 mKIAA0 SWKETLAFPPEVP--VSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRER .... .. : .: .: .:.: . ..:. : . .:::.: : . mKIAA0 FYEKNRSLMPSIPRETSPYLANLLLGLL--QRNQKDRMDFEAFFSHPFLEQVPVK--KSC 250 260 270 280 290 90 100 110 120 130 140 mKIAA0 PAAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGS :. .:. . .: .. : . .: :. ::.. mKIAA0 PVPVPVYSGPVPGSSCSSS-PSCRFASP-PSL--PDMQHIQEENLSSPPLGPPNYLQVSK 300 310 320 330 340 350 150 mKIAA0 IPTYMKAGKL mKIAA0 DSASNSSKNSSCDTDDFVLVPHNISSDHSYDMPMGTTARRASNEFFMCGGQCQPTVSPHS 360 370 380 390 400 410 159 residues in 1 query sequences 1768858 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:32:50 2006 done: Mon Mar 27 10:32:50 2006 Scan time: 0.360 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]