# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mia06062.fasta.nr -Q ../query/mKIAA0965.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0965, 159 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7908447 sequences Expectation_n fit: rho(ln(x))= 5.1334+/-0.000184; mu= 6.9615+/- 0.010 mean_var=65.8329+/-12.722, 0's: 42 Z-trim: 115 B-trim: 2 in 1/64 Lambda= 0.158071 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|56749653|sp|Q7TSE6.1|ST38L_MOUSE RecName: Full= ( 464) 1117 263.0 4.1e-68 gi|26342512|dbj|BAC34918.1| unnamed protein produc ( 464) 1117 263.0 4.1e-68 gi|149234236|ref|XP_001477884.1| PREDICTED: simila ( 400) 1094 257.7 1.4e-66 gi|148707942|gb|EDL39889.1| mCG6227 [Mus musculus] ( 464) 1094 257.7 1.5e-66 gi|38566110|gb|AAH62170.1| Stk38l protein [Mus mus ( 471) 1093 257.5 1.8e-66 gi|154425617|gb|AAI51310.1| STK38L protein [Bos ta ( 464) 1077 253.8 2.3e-65 gi|194211800|ref|XP_001916398.1| PREDICTED: simila ( 470) 1077 253.8 2.3e-65 gi|119616956|gb|EAW96550.1| serine/threonine kinas ( 264) 1074 253.0 2.3e-65 gi|73997246|ref|XP_534857.2| PREDICTED: similar to ( 620) 1077 253.9 2.9e-65 gi|194388252|dbj|BAG65510.1| unnamed protein produ ( 371) 1074 253.1 3e-65 gi|114645553|ref|XP_001143184.1| PREDICTED: serine ( 412) 1074 253.1 3.3e-65 gi|56749668|sp|Q9Y2H1.3|ST38L_HUMAN RecName: Full= ( 464) 1074 253.2 3.6e-65 gi|33304045|gb|AAQ02530.1| serine/threonine kinase ( 465) 1074 253.2 3.6e-65 gi|109096055|ref|XP_001099774.1| PREDICTED: simila ( 557) 1074 253.2 4.2e-65 gi|194389224|dbj|BAG65600.1| unnamed protein produ ( 202) 1068 251.6 4.8e-65 gi|126340336|ref|XP_001362555.1| PREDICTED: simila ( 464) 1066 251.3 1.3e-64 gi|224096026|ref|XP_002189753.1| PREDICTED: serine ( 402) 1062 250.4 2.2e-64 gi|49522480|gb|AAH75525.1| Serine/threonine kinase ( 464) 1024 241.7 9.8e-62 gi|46329763|gb|AAH68948.1| MGC83214 protein [Xenop ( 464) 1005 237.4 2e-60 gi|55962529|emb|CAI12061.1| serine/threonine kinas ( 464) 980 231.7 1e-58 gi|27881929|gb|AAH44485.1| Serine/threonine kinase ( 463) 964 228.1 1.3e-57 gi|148690059|gb|EDL22006.1| mCG12983 [Mus musculus ( 417) 959 226.9 2.6e-57 gi|47207805|emb|CAF89985.1| unnamed protein produc ( 515) 958 226.7 3.6e-57 gi|118102361|ref|XP_425819.2| PREDICTED: similar t ( 522) 920 218.1 1.5e-54 gi|114607168|ref|XP_001173139.1| PREDICTED: serine ( 463) 918 217.6 1.9e-54 gi|126309927|ref|XP_001378903.1| PREDICTED: simila ( 465) 916 217.1 2.6e-54 gi|60551585|gb|AAH91415.1| Serine/threonine kinase ( 204) 906 214.6 6.4e-54 gi|224084728|ref|XP_002194034.1| PREDICTED: serine ( 465) 910 215.8 6.6e-54 gi|114607166|ref|XP_001173106.1| PREDICTED: serine ( 414) 909 215.5 7e-54 gi|114607170|ref|XP_001173151.1| PREDICTED: serine ( 431) 909 215.5 7.3e-54 gi|114607162|ref|XP_001173054.1| PREDICTED: serine ( 444) 909 215.5 7.4e-54 gi|194040410|ref|XP_001929587.1| PREDICTED: simila ( 465) 909 215.5 7.7e-54 gi|114607164|ref|XP_518435.2| PREDICTED: serine/th ( 465) 909 215.5 7.7e-54 gi|109070924|ref|XP_001116805.1| PREDICTED: serine ( 463) 907 215.1 1.1e-53 gi|149043496|gb|EDL96947.1| serine/threonine kinas ( 465) 906 214.8 1.2e-53 gi|27882506|gb|AAH44428.1| Zgc:55572 [Danio rerio] ( 468) 905 214.6 1.5e-53 gi|33304003|gb|AAQ02509.1| serine/threonine kinase ( 466) 903 214.2 2e-53 gi|194223455|ref|XP_001495015.2| PREDICTED: simila ( 465) 900 213.5 3.2e-53 gi|73972712|ref|XP_538887.2| PREDICTED: similar to ( 609) 901 213.8 3.4e-53 gi|182889864|gb|AAI65742.1| Zgc:55572 protein [Dan ( 468) 899 213.2 3.8e-53 gi|56749457|sp|Q15208.1|STK38_HUMAN RecName: Full= ( 465) 898 213.0 4.4e-53 gi|189069118|dbj|BAG35456.1| unnamed protein produ ( 465) 898 213.0 4.4e-53 gi|156633631|sp|A2VDV2.1|STK38_BOVIN RecName: Full ( 465) 896 212.6 6e-53 gi|55731792|emb|CAH92600.1| hypothetical protein [ ( 465) 889 211.0 1.8e-52 gi|56749663|sp|Q91VJ4.1|STK38_MOUSE RecName: Full= ( 465) 888 210.7 2.1e-52 gi|148690654|gb|EDL22601.1| serine/threonine kinas ( 496) 888 210.8 2.3e-52 gi|33417285|gb|AAH56129.1| Trc-prov protein [Xenop ( 465) 886 210.3 2.9e-52 gi|220672667|emb|CAX13436.1| novel protein similar ( 468) 871 206.9 3.2e-51 gi|189534986|ref|XP_001923991.1| PREDICTED: simila ( 469) 871 206.9 3.2e-51 gi|221044550|dbj|BAH13952.1| unnamed protein produ ( 129) 849 201.5 3.6e-50 >>gi|56749653|sp|Q7TSE6.1|ST38L_MOUSE RecName: Full=Seri (464 aa) initn: 1117 init1: 1117 opt: 1117 Z-score: 1379.2 bits: 263.0 E(): 4.1e-68 Smith-Waterman score: 1117; 100.000% identity (100.000% similar) in 159 aa overlap (1-159:306-464) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV :::::::::::::::::::::::::::::: gi|567 RRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGFPPFCSETPQETYRKV 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI 400 410 420 430 440 450 mKIAA0 PTYMKAGKL ::::::::: gi|567 PTYMKAGKL 460 >>gi|26342512|dbj|BAC34918.1| unnamed protein product [M (464 aa) initn: 1117 init1: 1117 opt: 1117 Z-score: 1379.2 bits: 263.0 E(): 4.1e-68 Smith-Waterman score: 1117; 100.000% identity (100.000% similar) in 159 aa overlap (1-159:306-464) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV :::::::::::::::::::::::::::::: gi|263 RRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGFPPFCSETPQETYRKV 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI 400 410 420 430 440 450 mKIAA0 PTYMKAGKL ::::::::: gi|263 PTYMKAGKL 460 >>gi|149234236|ref|XP_001477884.1| PREDICTED: similar to (400 aa) initn: 1094 init1: 1094 opt: 1094 Z-score: 1351.8 bits: 257.7 E(): 1.4e-66 Smith-Waterman score: 1094; 98.113% identity (98.742% similar) in 159 aa overlap (1-159:242-400) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV :::::::::::::::::::::::::::::: gi|149 RRQLAYSTVGTADYIAPEVFMQTGSNKLCDWWSLGVIMYEMLIGFPPFCSETPQETYRKV 220 230 240 250 260 270 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|149 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIRGHPFFEGVDWGHIRERP 280 290 300 310 320 330 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::::::::::::::::::::::: ::::::::::::::::::::::::: ::::: gi|149 AAIPIEIRSIDDTSNFDDFPESDILQPVLNTTEPDYKSKDWVFLNYTYKRFEGLIQRGSI 340 350 360 370 380 390 mKIAA0 PTYMKAGKL ::::::::: gi|149 PTYMKAGKL 400 >>gi|148707942|gb|EDL39889.1| mCG6227 [Mus musculus] (464 aa) initn: 1094 init1: 1094 opt: 1094 Z-score: 1350.9 bits: 257.7 E(): 1.5e-66 Smith-Waterman score: 1094; 98.113% identity (98.742% similar) in 159 aa overlap (1-159:306-464) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV :::::::::::::::::::::::::::::: gi|148 RRQLAYSTVGTADYIAPEVFMQTGSNKLCDWWSLGVIMYEMLIGFPPFCSETPQETYRKV 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|148 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIRGHPFFEGVDWGHIRERP 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::::::::::::::::::::::: ::::::::::::::::::::::::: ::::: gi|148 AAIPIEIRSIDDTSNFDDFPESDILQPVLNTTEPDYKSKDWVFLNYTYKRFEGLIQRGSI 400 410 420 430 440 450 mKIAA0 PTYMKAGKL ::::::::: gi|148 PTYMKAGKL 460 >>gi|38566110|gb|AAH62170.1| Stk38l protein [Mus musculu (471 aa) initn: 835 init1: 835 opt: 1093 Z-score: 1349.6 bits: 257.5 E(): 1.8e-66 Smith-Waterman score: 1093; 95.783% identity (95.783% similar) in 166 aa overlap (1-159:306-471) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV :::::::::::::::::::::::::::::: gi|385 RRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGFPPFCSETPQETYRKV 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP 340 350 360 370 380 390 100 110 120 130 140 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPV-------PNTTEPDYKSKDWVFLNYTYKRFEG :::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|385 AAIPIEIRSIDDTSNFDDFPESDILQPVAFFLFLVPNTTEPDYKSKDWVFLNYTYKRFEG 400 410 420 430 440 450 150 mKIAA0 LTQRGSIPTYMKAGKL :::::::::::::::: gi|385 LTQRGSIPTYMKAGKL 460 470 >>gi|154425617|gb|AAI51310.1| STK38L protein [Bos taurus (464 aa) initn: 1077 init1: 1077 opt: 1077 Z-score: 1330.0 bits: 253.8 E(): 2.3e-65 Smith-Waterman score: 1077; 94.969% identity (99.371% similar) in 159 aa overlap (1-159:306-464) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV ::::::::::::::.::::::::::::::: gi|154 RRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKV 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP :.:::::.::::::.:::::::::::: ::::::::.::::::.:::::::::::::::: gi|154 MNWKETLVFPPEVPISEKAKDLILRFCIDSENRIGNSGVEEIKSHPFFEGVDWGHIRERP 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 AAIPIEIKSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI 400 410 420 430 440 450 mKIAA0 PTYMKAGKL ::::::::: gi|154 PTYMKAGKL 460 >>gi|194211800|ref|XP_001916398.1| PREDICTED: similar to (470 aa) initn: 1077 init1: 1077 opt: 1077 Z-score: 1329.9 bits: 253.8 E(): 2.3e-65 Smith-Waterman score: 1077; 94.969% identity (99.371% similar) in 159 aa overlap (1-159:312-470) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV ::::::::::::::.::::::::::::::: gi|194 RRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKV 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP :.:::::.::::::.::::::::::::.::::::::.:::::: :::::::::::::::: gi|194 MNWKETLVFPPEVPISEKAKDLILRFCVDSENRIGNSGVEEIKDHPFFEGVDWGHIRERP 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AAIPIEIKSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI 410 420 430 440 450 460 mKIAA0 PTYMKAGKL ::::::::: gi|194 PTYMKAGKL 470 >>gi|119616956|gb|EAW96550.1| serine/threonine kinase 38 (264 aa) initn: 1074 init1: 1074 opt: 1074 Z-score: 1329.8 bits: 253.0 E(): 2.3e-65 Smith-Waterman score: 1074; 94.969% identity (98.742% similar) in 159 aa overlap (1-159:106-264) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV ::::::::::::::.::::::::::::::: gi|119 RRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKV 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP :.:::::.::::::.:::::::::::: ::::::::.:::::::::::::::: :::::: gi|119 MNWKETLVFPPEVPISEKAKDLILRFCIDSENRIGNSGVEEIKGHPFFEGVDWEHIRERP 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AAIPIEIKSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI 200 210 220 230 240 250 mKIAA0 PTYMKAGKL ::::::::: gi|119 PTYMKAGKL 260 >>gi|73997246|ref|XP_534857.2| PREDICTED: similar to ser (620 aa) initn: 1077 init1: 1077 opt: 1077 Z-score: 1328.1 bits: 253.9 E(): 2.9e-65 Smith-Waterman score: 1077; 94.969% identity (99.371% similar) in 159 aa overlap (1-159:462-620) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV ::::::::::::::.::::::::::::::: gi|739 RRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKV 440 450 460 470 480 490 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP :.:::::.::::::.:::::::::::: ::::::::.::::::.:::::::::::::::: gi|739 MNWKETLVFPPEVPISEKAKDLILRFCIDSENRIGNSGVEEIKSHPFFEGVDWGHIRERP 500 510 520 530 540 550 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AAIPIEIKSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI 560 570 580 590 600 610 mKIAA0 PTYMKAGKL ::::::::: gi|739 PTYMKAGKL 620 >>gi|194388252|dbj|BAG65510.1| unnamed protein product [ (371 aa) initn: 1074 init1: 1074 opt: 1074 Z-score: 1327.7 bits: 253.1 E(): 3e-65 Smith-Waterman score: 1074; 94.969% identity (98.742% similar) in 159 aa overlap (1-159:213-371) 10 20 30 mKIAA0 WWSLGVIMYEMLIGFPPFCSETPQETYRKV ::::::::::::::.::::::::::::::: gi|194 RRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKV 190 200 210 220 230 240 40 50 60 70 80 90 mKIAA0 MSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERP :.:::::.::::::.:::::::::::: ::::::::.:::::::::::::::: :::::: gi|194 MNWKETLVFPPEVPISEKAKDLILRFCIDSENRIGNSGVEEIKGHPFFEGVDWEHIRERP 250 260 270 280 290 300 100 110 120 130 140 150 mKIAA0 AAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AAIPIEIKSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLTQRGSI 310 320 330 340 350 360 mKIAA0 PTYMKAGKL ::::::::: gi|194 PTYMKAGKL 370 159 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 07:33:30 2009 done: Tue Mar 17 07:37:42 2009 Total Scan time: 608.850 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]