Comparison of KIAA cDNA sequences between mouse and human (KIAA0965)

<< Original sequence data >>

mouse  mKIAA0965 (mia06062)     length:   3325 bp
human  hj06174s1    length:   5181 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      477       420       57      11.95
  Total:      477       420       57      11.95

  3'UTR:     2866      1869      997      34.79

amino acid

  CDS1 :      159       151        8       5.03
  Total:      159       151        8       5.03
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse     2 -   481      2 -   481      1 -   160
         human  1200 -  1679    210 -  1679    331 -   490
  3'UTR: mouse   482 -  3325
         human  1680 -  5181
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
              1 ----+----*----+----*----+----*----+----*----+----* 50
              1 W  W  S  L  G  V  I  M  Y  E  M  L  I  G  F  P  P  17
mia06062      2 TGGTGGTCCTTGGGAGTGATTATGTACGAGATGCTAATAGGCTTTCCACC 51
                |||||||| ||||||||||||||||| || ||||||||||| | ||||||
hj06174s1  1200 TGGTGGTCTTTGGGAGTGATTATGTATGAAATGCTAATAGGATATCCACC 1249
            331 W  W  S  L  G  V  I  M  Y  E  M  L  I  G  Y  P  P  347

             51 ----+----*----+----*----+----*----+----*----+----* 100
             18  F  C  S  E  T  P  Q  E  T  Y  R  K  V  M  S  W  K 34
mia06062     52 TTTCTGCTCTGAAACACCACAAGAAACATACAGAAAAGTTATGAGCTGGA 101
                |||||||||||||||||| |||||||||||||||||||| |||| |||||
hj06174s1  1250 TTTCTGCTCTGAAACACCTCAAGAAACATACAGAAAAGTGATGAACTGGA 1299
            348  F  C  S  E  T  P  Q  E  T  Y  R  K  V  M  N  W  K 364

            101 ----+----*----+----*----+----*----+----*----+----* 150
             35   E  T  L  A  F  P  P  E  V  P  V  S  E  K  A  K   50
mia06062    102 AGGAGACTCTGGCATTTCCTCCGGAAGTGCCCGTCTCTGAGAAAGCCAAG 151
                | || ||||||| ||||||||| || || ||  | |||||||||||||||
hj06174s1  1300 AAGAAACTCTGGTATTTCCTCCAGAGGTACCTATATCTGAGAAAGCCAAG 1349
            365   E  T  L  V  F  P  P  E  V  P  I  S  E  K  A  K   380

            151 ----+----*----+----*----+----*----+----*----+----* 200
             51 D  L  I  L  R  F  C  T  D  S  E  N  R  I  G  N  G  67
mia06062    152 GACTTGATTCTCAGATTTTGTACTGATTCTGAAAACAGAATTGGGAATGG 201
                ||||| |||||||||||||||| ||||||||||||||||||||| ||| |
hj06174s1  1350 GACTTAATTCTCAGATTTTGTATTGATTCTGAAAACAGAATTGGAAATAG 1399
            381 D  L  I  L  R  F  C  I  D  S  E  N  R  I  G  N  S  397

            201 ----+----*----+----*----+----*----+----*----+----* 250
             68  G  V  E  E  I  K  G  H  P  F  F  E  G  V  D  W  G 84
mia06062    202 TGGTGTGGAAGAAATCAAAGGTCATCCGTTCTTTGAGGGTGTAGACTGGG 251
                ||| || |||||||| ||||||||||| || ||||| ||||| |||||||
hj06174s1  1400 TGGAGTAGAAGAAATAAAAGGTCATCCCTTTTTTGAAGGTGTCGACTGGG 1449
            398  G  V  E  E  I  K  G  H  P  F  F  E  G  V  D  W  E 414

            251 ----+----*----+----*----+----*----+----*----+----* 300
             85   H  I  R  E  R  P  A  A  I  P  I  E  I  R  S  I   100
mia06062    252 GGCACATAAGGGAAAGACCAGCAGCTATTCCTATAGAAATCCGGAGTATA 301
                 ||||||||||||||| |||||||| || ||||||||||||   || || 
hj06174s1  1450 AGCACATAAGGGAAAGGCCAGCAGCAATCCCTATAGAAATCAAAAGCATT 1499
            415   H  I  R  E  R  P  A  A  I  P  I  E  I  K  S  I   430

            301 ----+----*----+----*----+----*----+----*----+----* 350
            101 D  D  T  S  N  F  D  D  F  P  E  S  D  I  L  Q  P  117
mia06062    302 GATGACACCTCAAACTTTGATGACTTCCCTGAGTCTGATATCTTACAGCC 351
                ||||| || ||||| ||||||||||||||||| |||||||| ||||| ||
hj06174s1  1500 GATGATACTTCAAATTTTGATGACTTCCCTGAATCTGATATTTTACAACC 1549
            431 D  D  T  S  N  F  D  D  F  P  E  S  D  I  L  Q  P  447

            351 ----+----*----+----*----+----*----+----*----+----* 400
            118  V  P  N  T  T  E  P  D  Y  K  S  K  D  W  V  F  L 134
mia06062    352 AGTGCCGAATACCACAGAGCCCGACTACAAATCCAAAGACTGGGTTTTTC 401
                |||||| ||||||||||| || ||||||||||||||||||||||||||||
hj06174s1  1550 AGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC 1599
            448  V  P  N  T  T  E  P  D  Y  K  S  K  D  W  V  F  L 464

            401 ----+----*----+----*----+----*----+----*----+----* 450
            135   N  Y  T  Y  K  R  F  E  G  L  T  Q  R  G  S  I   150
mia06062    402 TCAATTACACCTACAAAAGGTTTGAAGGGCTGACCCAGAGAGGCTCCATT 451
                ||||||| ||||| ||||||||||||||| |||| ||  | ||||| || 
hj06174s1  1600 TCAATTATACCTATAAAAGGTTTGAAGGGTTGACTCAACGTGGCTCTATC 1649
            465   N  Y  T  Y  K  R  F  E  G  L  T  Q  R  G  S  I   480

            451 ----+----*----+----*----+----* 480
            151 P  T  Y  M  K  A  G  K  L  *   160
mia06062    452 CCTACATACATGAAAGCTGGGAAGTTATGA 481
                || || ||||||||||||||||||||||||
hj06174s1  1650 CCCACCTACATGAAAGCTGGGAAGTTATGA 1679
            481 P  T  Y  M  K  A  G  K  L  *   490


*--[ 3'UTR ]--*
              1 ----+----*----+----*----+----*----+----*----+----* 50
mia06062    482 ....TGATCACAGTCGCCCATAGCCAGGAGAACTCAGGTAGCTGCATCCG 527
                     ||| ||| || |||||| ||| |||||||||||||||||||||  
hj06174s1  1680 ATGAAGATAACATTCACCCATAACCAAGAGAACTCAGGTAGCTGCATCAC 1729

             51 ----+----*----+----*----+----*----+----*----+----* 100
mia06062    528 CAGGCTGGCTCGGCATCAGCACCAGGAGCTCTGGGACA............ 565
                |||||| ||| ||| |    | ||  | | |||  | |            
hj06174s1  1730 CAGGCTTGCTTGGCGTAGATAACAATA.CACTGAAATACTCCTGAAGATG 1778

            101 ----+----*----+----*----+----*----+----*----+----* 150
mia06062    566 ...GTGCTGCTCTCCAGCCAGAGGAACGACTACAG..CTTGGGAATCTGA 610
                   |||||  |   |  | |||||||   ||||||   | ||   ||| |
hj06174s1  1779 GTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCTAA 1828

            151 ----+----*----+----*----+----*----+----*----+----* 200
mia06062    611 GGCTGCTATGGCTA....TGGGAATTGC..TCAGCTTTTTTTTTTCTTTT 654
                | || |||| |  |    | || | |||   | |  | |||||||   | 
hj06174s1  1829 GACTACTATAGGAATTGGTTGGCAGTGCCAGCTGGCTCTTTTTTTTAATA 1878

            201 ----+----*----+----*----+----*----+----*----+----* 250
mia06062    655 TCTTTTTTTTTGTATTAACTTTATTATACAAAGGTACTGGAACAAAAGAA 704
                | || || ||| | ||||||||||||||  |||||||||||| ||||| |
hj06174s1  1879 TTTTATTATTTTTGTTAACTTTATTATATGAAGGTACTGGAATAAAAGGA 1928

            251 ----+----*----+----*----+----*----+----*----+----* 300
mia06062    705 ACAGACATTCCCTCCTAACTGCACTGCCTACGTGCATGTTGAGAGGTCCA 754
                |||||||| || | ||||||||||||||||| ||| | ||   |||||||
hj06174s1  1929 ACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATT..AAGGTCCA 1976

            301 ----+----*----+----*----+----*----+----*----+----* 350
mia06062    755 TCCTGCC..CATGTGCTGCGCTTCCGA....TTGCAACACTAATCCAGCC 798
                | |||||    ||||||| |  |  ||    |  || | |||||| |  |
hj06174s1  1977 TTCTGCCTGTGTGTGCTGTGGCTTTGAACTGTAACACCTCTAATCAATTC 2026

            351 ----+----*----+----*----+----*----+----*----+----* 400
mia06062    799 ...AGAACTGCATTGCACTGACGGCACCAT..GACAGCCTG.AGGTTGCT 842
                   ||||   |||  || | |  ||| |||  |  | |||| ||||  | 
hj06174s1  2027 AGGAGAAACACATATCATTTAAAGCAACATAGGCTAACCTGTAGGTAACA 2076

            401 ----+----*----+----*----+----*----+----*----+----* 450
mia06062    843 CT.CAGTGTCCCTGCTTCACTGCAGAGCCCGTGGGTCTAG..AATCAGTG 889
                || |||| |   || || |||||| | |   |||||||||  ||||||| 
hj06174s1  2077 CTGCAGTATTGATGTTTTACTGCAAATCTTATGGGTCTAGATAATCAGT. 2125

            451 ----+----*----+----*----+----*----+----*----+----* 500
mia06062    890 AAAAGCCATCTTCTGTAGCTGCTGTTAGTAGAACATTTGCCCTGTTGGTT 939
                |||||||||||||  ||| || |||||| | |    ||||||| ||||||
hj06174s1  2126 AAAAGCCATCTTCCATAGTTGGTGTTAGAACA....TTGCCCTATTGGTT 2171

            501 ----+----*----+----*----+----*----+----*----+----* 550
mia06062    940 TGGACAT.TGTGGGCTCTGCATGAAGACAGTTTCTGTACCGGCTCCAAGG 988
                ||||||| ||| |  | |  ||||||||| ||||||||  || |  ||| 
hj06174s1  2172 TGGACATCTGTAGAATATATATGAAGACAATTTCTGTAATGGTTTTAAGA 2221

            551 ----+----*----+----*----+----*----+----*----+----* 600
mia06062    989 AACTTAAGGA......CGCTGACTTCAACGACATTAGAATTTCCTGTCAG 1032
                 | ||||  |      | |||  |      | | ||||||||    ||| 
hj06174s1  2222 GATTTAAAAAGAAATTCACTGGTTCTTTACAAAATAGAATTTATCATCAA 2271

            601 ----+----*----+----*----+----*----+----*----+----* 650
mia06062   1033 GCTCTCACGCAGAC.CCTGTGATAGGGAAGATGAGCTTCT.GTTAGGGTG 1080
                | | | || || ||  |   |  |||   ||  || || |  | |||  |
hj06174s1  2272 GTTATTACACAAACTTCACAGTAAGGAGTGACAAGTTTATAATAAGGAAG 2321

            651 ----+----*----+----*----+----*----+----*----+----* 700
mia06062   1081 AGGGCATTTCTCACCTTCGCTCCGGCA....TCTCCAAGGCTGACGGTGC 1126
                |     |||  ||||||| |||  |||     ||   |   | ||| |||
hj06174s1  2322 ACAAAGTTTAACACCTTCACTCAAGCACTCCACTAATATATTTACGTTGC 2371

            701 ----+----*----+----*----+----*----+----*----+----* 750
mia06062   1127 ..TGAGAGATTGTGA........CTTGACGACTGATGTGCACACAT..GG 1164
                  | ||| ||  |||         |  |||     |||  || |||  ||
hj06174s1  2372 ATTCAGAAATACTGATGACCTTCATATACGTAGTCTGTATACTCATAGGG 2421

            751 ----+----*----+----*----+----*----+----*----+----* 800
mia06062   1165 AGATGGACCTGAATGATTGTCAGCTA........................ 1190
                ||||| ||   | |   |  ||  ||                        
hj06174s1  2422 AGATGTACTGTATTATATAACATGTAAAGTTGATTTTCTTGTGACAAGAG 2471

            801 ----+----*----+----*----+----*----+----*----+----* 850
mia06062   1191 ....CTCACTTTTAACA..ATGCTGTAGCATTGTTTTAGTTTGAGGATGG 1234
                         ||||||||  | |   | ||||| ||||| |||||  ||||
hj06174s1  2472 AACTTCTTTTTTTAACAAGAGGACATGGCATTATTTTAATTTGATTATGG 2521

            851 ----+----*----+----*----+----*----+----*----+----* 900
mia06062   1235 TGAGCTGAGTTTCAGAAATGACCATGAAAGCTGCTTGTAGAACCTAGTAT 1284
                |||| ||| ||| ||| ||||||||||| |||||||||||||  |||| |
hj06174s1  2522 TGAGTTGAATTTAAGACATGACCATGAAGGCTGCTTGTAGAA.TTAGTGT 2570

            901 ----+----*----+----*----+----*----+----*----+----* 950
mia06062   1285 GTTTTTATTAAACTATTTTTTTTAATGTCAAACTTCTGATCAGTCAATGG 1334
                 ||||||||||||||||||||| ||||||||||||||     || |||||
hj06174s1  2571 ATTTTTATTAAACTATTTTTTTAAATGTCAAACTTCTATCATGTAAATGG 2620

            951 ----+----*----+----*----+----*----+----*----+----* 1000
mia06062   1335 ACACTGTGGAGAGCAGAGTGTGGCTCACTGTGGCTTTCTGCAGAGGTGGT 1384
                ||  | | |||| || |  |    | ||| ||| |||||  | || || |
hj06174s1  2621 AC.TTATAGAGAACAAAAAGCTATTTACTTTGGTTTTCTAGAAAGTTGTT 2669

           1001 ----+----*----+----*----+----*----+----*----+----* 1050
mia06062   1385 ACTTGTC.CAGCTGGTGACCCTTTGTTCCCTTGATTGCA........... 1422
                || | ||   |||||| | | ||| || | ||   || |           
hj06174s1  2670 ACATATCATGGCTGGTTAACTTTTATTTCTTTTGATGAAAATTTTTCCTT 2719

           1051 ----+----*----+----*----+----*----+----*----+----* 1100
mia06062   1423 ................CTAGTGCCATTGTTTT.........CCAATGAAC 1447
                                 | |||||||| ||||         | |||| ||
hj06174s1  2720 TGATAGTACTTGTATTATTGTGCCATTATTTTCTTATGCTCCAAATGTAC 2769

           1101 ----+----*----+----*----+----*----+----*----+----* 1150
mia06062   1448 CAAAGATCCTGAAC..AGTGGCTG.TCAGCAGGGAGTGGAGCTCCGGCTT 1494
                |||||||| |||||  ||||| || |||  |  |||| ||  |    |||
hj06174s1  2770 CAAAGATCTTGAACAGAGTGGATGTTCACAACTGAGTAGA.ATTTTCCTT 2818

           1151 ----+----*----+----*----+----*----+----*----+----* 1200
mia06062   1495 TACAGGGGAGCTGC...............................GCTCC 1513
                | | | ||   |||                               |    
hj06174s1  2819 TCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGAGGTCAG 2868

           1201 ----+----*----+----*----+----*----+----*----+----* 1250
mia06062   1514 CTTGACAGAGGCCAGCCCTGTTCACTGTTAGCT.CATCACTGTGGTTAAA 1562
                |||   | ||| ||    |||||    |||||| |||||||||||| || 
hj06174s1  2869 CTTATTAAAGGGCAATATTGTTCTTGTTTAGCTACATCACTGTGGTGAA. 2917

           1251 ----+----*----+----*----+----*----+----*----+----* 1300
mia06062   1563 GCCCATTATGAAATACAGGAAGTGGGTGCTGGCTGGGAGGGTGTGACTGG 1612
                       ||| |||  |||||||   ||| |||  || || |||||   |
hj06174s1  2918 ..TATAGATGGAATTAAGGAAGTAAATGCAGGCCAGGGGGTTGTGATGAG 2965

           1301 ----+----*----+----*----+----*----+----*----+----* 1350
mia06062   1613 AGACT..GGGCAGAAAAGTCAGCATCAGATTCTTGGGGTGTTTCCCTAAG 1660
                ||  |  |||    ||  ||||||||| |||||| |||| | || |||||
hj06174s1  2966 AGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCTCTCTAAG 3015

           1351 ----+----*----+----*----+----*----+----*----+----* 1400
mia06062   1661 GATTACATCATCTTTTCTTGCTTAGCATTTTGATTCTGAAACAACTTTCT 1710
                 |||| || ||||||||| |||||  ||||| ||||| |  |||    ||
hj06174s1  3016 AATTAAATAATCTTTTCTAGCTTAATATTTTAATTCTAATTCAAACAACT 3065

           1401 ----+----*----+----*----+----*----+----*----+----* 1450
mia06062   1711 GAGGAGATGTAGTTTTGTGAGTTGTAGTTG.....TAGTAACTTCTCAGG 1755
                  |  | | | ||||  | |||  ||||||     || ||   |  ||  
hj06174s1  3066 CTGAGGTTTTGGTTTCATTAGTAATAGTTGAGGAATAATATACTAGCAAA 3115

           1451 ----+----*----+----*----+----*----+----*----+----* 1500
mia06062   1756 GAATGG.CTAATGTTTATCATCTATGATTGATATAGTGAGACTTTATGGG 1804
                |||||| ||||||||| ||||   ||                 |||  ||
hj06174s1  3116 GAATGGCCTAATGTTTGTCATAACTG.................TTAATGG 3148

           1501 ----+----*----+----*----+----*----+----*----+----* 1550
mia06062   1805 AGGAATGCTTCTCCTGAGGGCACTGAGCAATGCCTTGTGACCCCTCTTTC 1854
                | |||   || |   ||    ||   |  |  | || | |    ||| | 
hj06174s1  3149 ATGAAATTTTTTAAAGATACAACCATGATAACCATTATAAATGATCTATG 3198

           1551 ----+----*----+----*----+----*----+----*----+----* 1600
mia06062   1855 ATCAAGGCCATCAGCTCCTGATTTATTTTGGTGAGTCCTTTAAGGCCCCC 1904
                |||||   | | |  |  ||| ||||||    || |   ||         
hj06174s1  3199 ATCAAAATC.TAAAGTGATGAATTATTTGTAGGAATGTCTTCCTAATGGG 3247

           1601 ----+----*----+----*----+----*----+----*----+----* 1650
mia06062   1905 CCCATTTTGCTGTTGAG...TCTGGTAATCAACACCACTTGTTAT..... 1946
                      ||||    |||   | ||  |||| |||| |  | ||||     
hj06174s1  3248 GAAGAATTGCATAGGAGCATTATGCAAATCTACACAAGCTTTTATAAATG 3297

           1651 ----+----*----+----*----+----*----+----*----+----* 1700
mia06062   1947 .................................................C 1947
                                                                 |
hj06174s1  3298 TTGCTGCTGGGTAGCTCCACAGTGTTTCATAAGGCCATCCTGTTTCCCCC 3347

           1701 ----+----*----+----*----+----*----+----*----+----* 1750
mia06062   1948 TACTGGCTCAGCTGTAGCCTGATCAATCCTA................... 1978
                 |||  | ||  | | |  || |   |  ||                   
hj06174s1  3348 AACTCCCCCATTTTTGGTTTGTTTCTTTTTAAATATTTGTTGAGTACTTA 3397

           1751 ----+----*----+----*----+----*----+----*----+----* 1800
mia06062   1979 ...........................................TGCCAAG 1985
                                                           |    ||
hj06174s1  3398 CGTGTTTATCTAACAGTTCACTTCCATTTTTCTAGTCTGGATTTTTTGAG 3447

           1801 ----+----*----+----*----+----*----+----*----+----* 1850
mia06062   1986 TATTTGGAGAAAGCACTGAAAATGGTAGATAAGCCTCCCTGACTTTAGCT 2035
                ||||| |  ||   |   |  |       |  |  |  || | | |  ||
hj06174s1  3448 TATTTAGGAAAGAGAGCTATTAAAAACTCTGGGGATTTCTCAATGTGACT 3497

           1851 ----+----*----+----*----+----*----+----*----+----* 1900
mia06062   2036 GCCTTAATATCTGCAGGGTATATGAGCTTCTCCAAGTAGTCTGTCTCAAG 2085
                  ||  |  | | |    ||||   || | |        |     | |  
hj06174s1  3498 AACTCTAATTTTTCTAATTATAACTGCCTTTAATTAACATAATATTAACT 3547

           1901 ----+----*----+----*----+----*----+----*----+----* 1950
mia06062   2086 GGTACTTAAGCAGCAGAGACCCCTGAATATAGGGATTCTACCTTTTCTTT 2135
                  | || | |     ||||       |          || || ||| |||
hj06174s1  3548 TTTGCTGAGGTTTATGAGATTTTCTCACCCCACATCGCTCCCCTTTTTTT 3597

           1951 ----+----*----+----*----+----*----+----*----+----* 2000
mia06062   2136 TAGAATGGGACTTTT.CTAGTGTG..AGTGTCTAGGTTGGATAGGAGA.C 2181
                 | || |    |||| ||||||||  | ||  |||||  |||| ||||  
hj06174s1  3598 AAAAAGGACTGTTTTGCTAGTGTGATAATGAATAGGTAAGATATGAGATA 3647

           2001 ----+----*----+----*----+----*----+----*----+----* 2050
mia06062   2182 CTTGCCAAATTCTCTAGCTCAGGTGTGATAACTACCTAACTATCGTAGGG 2231
                 |||| | ||| ||||| ||  || || ||||||        || |    
hj06174s1  3648 ATTGCAACATTGTCTAGTTCTAGTATGGTAACTA.......TTCTTGAAA 3690

           2051 ----+----*----+----*----+----*----+----*----+----* 2100
mia06062   2232 TGGGTGTTGTCAATCCAGGTAACTGGGGTAGTTTGAGATTAGTGTACAGG 2281
                |||   |    ||| | | ||| |    | |   ||||||  |  | || 
hj06174s1  3691 TGGTATTGAAAAATACCGTTAATTCAAATTGACAGAGATTGATAAAAAGA 3740

           2101 ----+----*----+----*----+----*----+----*----+----* 2150
mia06062   2282 A...GAATTACCAAACTTATGTTT................CCATGATGTA 2312
                |   || ||||| || ||   |||                 |||  | | 
hj06174s1  3741 AACTGATTTACCTAAGTTTACTTTTTAATTGCATAATAGAGCATTTTTTG 3790

           2151 ----+----*----+----*----+----*----+----*----+----* 2200
mia06062   2313 GGGACAGAGCACTTTGTCTGATCTCTCTGTTGTGGTTGTAAAAGCTGTGA 2362
                     ||  | ||   ||| ||  |      | | ||| |||   | | |
hj06174s1  3791 TTTTGAGTTCCCTCATTCTTATTACCAGAAAGAGCTTGCAAATAGTTTTA 3840

           2201 ----+----*----+----*----+----*----+----*----+----* 2250
mia06062   2363 GAGGCAGGTTTCCTGGTGGTGGAGAGGCATTTTGGGAAGTTTGCTT.... 2408
                        |||| |||   ||||  || | ||  ||||   | |||    
hj06174s1  3841 .......CTTTCTTGGCACTGGAAGGGTAGTTCTGGAAAGCTACTTTGTT 3883

           2251 ----+----*----+----*----+----*----+----*----+----* 2300
mia06062   2409 ..................TGCAGCATTAACATGGCTGCCCACTTTTCAGG 2440
                                  || ||     | |  | | | || | ||  ||
hj06174s1  3884 GAGAGTCTCATTCTTCCCTGGAGTTAATAGAGTGATTCACAATCTTTGGG 3933

           2301 ----+----*----+----*----+----*----+----*----+----* 2350
mia06062   2441 AATTTCTTGT....GGAAGCGTTCCCTAAG...CTAGTGTAAGGCCCCTA 2483
                  |||||  |      |||| || | ||||   |||    || ||   ||
hj06174s1  3934 GTTTTCTCCTCATCAAAAGCATTTCTTAAGTGCCTATCTAAAAGCAATTA 3983

           2351 ----+----*----+----*----+----*----+----*----+----* 2400
mia06062   2484 AAGACTGTCT...GCCTGTTGAAGC.AAAAATACGAGGCATGGTGCAAAT 2529
                |||||||| |    ||| | ||||| || |||  ||  |||| |||||||
hj06174s1  3984 AAGACTGTGTCTGCCCTTTAGAAGCTAAGAATTTGATTCATGATGCAAAT 4033

           2401 ----+----*----+----*----+----*----+----*----+----* 2450
mia06062   2530 TGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTCCCATTATA 2579
                |    | |||||||||| ||  ||  ||| | ||| ||||  | ||||||
hj06174s1  4034 TAACTAGATAATTTGCAAAGTACCCTTGAGATTGAATTTTCTCTATTATA 4083

           2451 ----+----*----+----*----+----*----+----*----+----* 2500
mia06062   2580 CACTTCCCATATTTTAGGTAAATAATGTAATTTAAGTGATAAAACCCTAT 2629
                 | ||||||||||| |||| |||||| |||||||| ||| ||||||||||
hj06174s1  4084 TATTTCCCATATTTCAGGTGAATAATTTAATTTAAATGACAAAACCCTAT 4133

           2501 ----+----*----+----*----+----*----+----*----+----* 2550
mia06062   2630 CTTAATCAACTGGGCATAGTGACATTTTCTCTTAAT....CTCTATTTTG 2675
                | || ||||||||||||| ||||||||||| | |||    ||||||||||
hj06174s1  4134 C.TAGTCAACTGGGCATAATGACATTTTCTTTAAATTAGACTCTATTTTG 4182

           2551 ----+----*----+----*----+----*----+----*----+----* 2600
mia06062   2676 AGTCTAGGAAGTTTTATTATAAAC..GGTGGTTTGGGTTTTTCTAAAGAT 2723
                | |  |   |||||||||||||||   ||| ||| |||||||||||  ||
hj06174s1  4183 AATTAAAAGAGTTTTATTATAAACCGTGTGTTTTTGGTTTTTCTAAGTAT 4232

           2601 ----+----*----+----*----+----*----+----*----+----* 2650
mia06062   2724 ACAGAAAATGTGTATAATCCAGATGTATTGGTTTCCTGATTGAGTAGAGA 2773
                | |||||   |||||||| ||||| |||   |||||||||| | |  |||
hj06174s1  4233 ATAGAAAGCTTGTATAATTCAGATTTATCAATTTCCTGATTTAATGTAGA 4282

           2651 ----+----*----+----*----+----*----+----*----+----* 2700
mia06062   2774 CTTGTACTTTTTCATT.AAAACCTTTGTGTTGAAGCAGTTGTT....... 2815
                |||  ||||||| ||| ||||||||||| || |||||  |  |       
hj06174s1  4283 CTTTGACTTTTTTATTAAAAACCTTTGTATTAAAGCAAGTTATGTTATTT 4332

           2701 ----+----*----+----*----+----*----+----*----+----* 2750
mia06062   2816 .......................CACAGC..TAAGTCTGGAGATGTATGA 2840
                                       || |||  ||| |||  | ||||||  
hj06174s1  4333 TTCTTTTATGCATTTATTACTAACATAGCTTTAAATCTTTAAATGTATTG 4382

           2751 ----+----*----+----*----+----*----+----*----+----* 2800
mia06062   2841 AACC..TGGGCTGTC.CAAAGTAAGTTGTGACCACTTAACCACC...... 2881
                || |  || ||||||  ||| ||||   |  |   | ||||| |      
hj06174s1  4383 AAGCATTGTGCTGTCTGAAAATAAGGAATTGCTTATAAACCAGCCACTTC 4432

           2801 ----+----*----+----*----+----*----+----*----+----* 2850
mia06062   2882 .......................GATCAGCTGTGTGGTGAAAG..TGCCA 2906
                                        || ||||   | ||||| |      |
hj06174s1  4433 TGAATACAATATGTAGCTGATTTAATAAGCTAGTTAGTGAATGGAAAATA 4482

           2851 ----+----*----+----*----+----*----+----*----+----* 2900
mia06062   2907 GCTATGGAATATTAAATGCGTTCTTTGGCTGCTAAGGCTTAAGATAGGG. 2955
                  | |||| |||||||   ||||||||| || |||||| |||||||||| 
hj06174s1  4483 AGTGTGGAGTATTAAAAATGTTCTTTGGTTGGTAAGGCCTAAGATAGGGT 4532

           2901 ----+----*----+----*----+----*----+----*----+----* 2950
mia06062   2956 CTCCTTTATTTCCGTA.TCAGCATAGCTCTTAAACACATGCATAGCTCTG 3004
                 || ||||||||  || |     |   | |||||||| ||||||  | | 
hj06174s1  4533 TTCATTTATTTCTATACTTTTTCTGTTTTTTAAACACCTGCATATTTTTA 4582

           2951 ----+----*----+----*----+----*----+----*----+----* 3000
mia06062   3005 TACAAGCTGTACATTTTAAAATATCTTGAAGCACAGTTTGTTTTGGTGTT 3054
                |  ||       | |||||||||| || ||| ||| ||  ||||||||||
hj06174s1  4583 TGTAAATCTCTAAATTTAAAATAT.TTTAAGTACATTTATTTTTGGTGTT 4631

           3001 ----+----*----+----*----+----*----+----*----+----* 3050
mia06062   3055 ........GAGAATCT.....AGTCCACCAGTCAGTCT...CTGACAGCA 3088
                         | || ||     | || | ||||||||||   ||||||| |
hj06174s1  4632 TTATTGTATAAAACCTTAGACAATCAATCAGTCAGTCTTTACTGACAGGA 4681

           3051 ----+----*----+----*----+----*----+----*----+----* 3100
mia06062   3089 GGAGAGATAGCTAGCCACCTACCTATCTTTTGGCAGTCTACAAGTAAGTT 3138
                | ||           || ||| || |||||||    ||||||| ||| | 
hj06174s1  4682 GCAG...........CAGCTATCTGTCTTTTGCTGATCTACAAATAAATG 4720

           3101 ----+----*----+----*----+----*----+----*----+----* 3150
mia06062   3139 ACTTGAG.....GGTCAGAAAAGGGTCCTGG........CACATCCTCTC 3175
                | |||||      |||   | |||  |||||        ||||| ||| |
hj06174s1  4721 AATTGAGAATTTAGTCCATAGAGGTCCCTGGCTACCAAACACATTCTC.C 4769

           3151 ----+----*----+----*----+----*----+----*----+----* 3200
mia06062   3176 TTTGAATTGTTAAAATTTGGAAAATTCAAAAGCAACTGTTTTGCTATGA. 3224
                |||||||||||||||||  ||| ||||||||  |||||||||||||  | 
hj06174s1  4770 TTTGAATTGTTAAAATTCAGAACATTCAAAA.TAACTGTTTTGCTACAAC 4818

           3201 ----+----*----+----*----+----*----+----*----+----* 3250
mia06062   3225 TCATGATTATT....TCTCATTTTATTTCAAAATTATTTTCTCTGTAGAA 3270
                 ||||||||||    | |  | ||  || ||| ||| ||||||| |||||
hj06174s1  4819 CCATGATTATTTTCCTGTTGTGTTTATTTAAATTTACTTTCTCTTTAGAA 4868

           3251 ----+----*----+----*----+----*----+----*----+----* 3300
mia06062   3271 GTGCACTTATTTCTGAAAAATCTT....AAGCCAACACTTA........A 3308
                ||||||||||||||||||||||||    || | ||| ||||        |
hj06174s1  4869 GTGCACTTATTTCTGAAAAATCTTAATGAAACAAACGCTTAGAACAAATA 4918

           3301 ----+----*----+----*----+----*----+----*----+----* 3350
mia06062   3309 TAAATATGAGACACTTG................................. 3325
                |||||||||||||||||                                 
hj06174s1  4919 TAAATATGAGACACTTGGGACTACTAGAGATATTTTAGATTTTTATGAAA 4968

           3351 ----+----*----+----*----+----*----+----*----+----* 3400
mia06062   3325 .................................................. 3325
                                                                  
hj06174s1  4969 AAAATGTGAGGGGATATTGCTGCTTTAAAAAGGAATAAAGTAATAAAAAT 5018

           3401 ----+----*----+----*----+----*----+----*----+----* 3450
mia06062   3325 .................................................. 3325
                                                                  
hj06174s1  5019 ATATCTCAGCTATTTTTTTAAAGCAATATAATTCAGCAATTGTCTAGAAA 5068

           3451 ----+----*----+----*----+----*----+----*----+----* 3500
mia06062   3325 .................................................. 3325
                                                                  
hj06174s1  5069 AGTAATCATGAGGCTACTGAGTTTGGTGTTCAGTTACTGAGTTTCAAAAA 5118

           3501 ----+----*----+----*----+----*----+----*----+----* 3550
mia06062   3325 .................................................. 3325
                                                                  
hj06174s1  5119 TGTTTTGGTGGCATGAGGACAAAATTTCATTGAAGGTAAGATAAGAATAA 5168

           3551 ----+----*--- 3563
mia06062   3325 ............. 3325
                             
hj06174s1  5169 AAACTATGTTTAC 5181