# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mia05093.fasta.nr -Q ../query/mKIAA1184.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1184, 388 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918192 sequences Expectation_n fit: rho(ln(x))= 4.8436+/-0.000183; mu= 12.6220+/- 0.010 mean_var=66.5093+/-12.907, 0's: 37 Z-trim: 58 B-trim: 0 in 0/66 Lambda= 0.157265 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|158564323|sp|Q69ZP3.2|PNKD_MOUSE RecName: Full= ( 385) 2629 605.1 8.3e-171 gi|197927180|ref|NP_001128222.1| myofibrillogenesi ( 385) 2614 601.7 8.8e-170 gi|90080856|dbj|BAE89909.1| unnamed protein produc ( 385) 2528 582.2 6.6e-164 gi|158563846|sp|Q8N490.2|PNKD_HUMAN RecName: Full= ( 385) 2512 578.6 8.2e-163 gi|160419155|sp|A7YY46.1|PNKD_BOVIN RecName: Full= ( 385) 2508 577.6 1.5e-162 gi|149711093|ref|XP_001491335.1| PREDICTED: paroxy ( 385) 2489 573.3 3e-161 gi|22209034|gb|AAH36457.1| Paroxysmal nonkinesigen ( 385) 2488 573.1 3.6e-161 gi|148667897|gb|EDL00314.1| mCG114807, isoform CRA ( 347) 2230 514.5 1.4e-143 gi|195539910|gb|AAI68228.1| Pnkd protein [Rattus n ( 369) 2223 513.0 4.3e-143 gi|149016096|gb|EDL75342.1| rCG23920, isoform CRA_ ( 388) 2220 512.3 7.2e-143 gi|37747507|gb|AAH58945.1| Pnkd protein [Mus muscu ( 424) 2125 490.8 2.4e-136 gi|26334311|dbj|BAC30873.1| unnamed protein produc ( 345) 2116 488.7 8.3e-136 gi|7670482|dbj|BAA95092.1| unnamed protein product ( 360) 2116 488.7 8.6e-136 gi|197927184|ref|NP_001128223.1| myofibrillogenesi ( 360) 2101 485.3 9.1e-135 gi|59006535|emb|CAB70870.2| hypothetical protein [ ( 325) 2037 470.7 2e-130 gi|55725426|emb|CAH89577.1| hypothetical protein [ ( 350) 2033 469.8 3.9e-130 gi|12804161|gb|AAH02937.1| Paroxysmal nonkinesigen ( 361) 2025 468.0 1.4e-129 gi|148667899|gb|EDL00316.1| mCG114807, isoform CRA ( 386) 1726 400.2 3.9e-109 gi|148667896|gb|EDL00313.1| mCG114807, isoform CRA ( 322) 1717 398.1 1.4e-108 gi|149016099|gb|EDL75345.1| rCG23920, isoform CRA_ ( 363) 1707 395.9 7.5e-108 gi|159155173|gb|AAI54687.1| Pnkd protein [Xenopus ( 312) 1366 318.5 1.3e-84 gi|120538690|gb|AAI29447.1| Im:7147352 protein [Da ( 343) 1330 310.3 4e-82 gi|189520161|ref|XP_001923240.1| PREDICTED: im:714 ( 361) 1330 310.4 4.2e-82 gi|119591011|gb|EAW70605.1| paroxysmal nonkinesiog ( 294) 1173 274.7 1.9e-71 gi|74005725|ref|XP_853023.1| PREDICTED: similar to ( 430) 1160 271.8 1.9e-70 gi|126337840|ref|XP_001365642.1| PREDICTED: simila ( 286) 1090 255.8 8.6e-66 gi|210122208|gb|EEA69916.1| hypothetical protein B ( 308) 981 231.1 2.5e-58 gi|190587118|gb|EDV27171.1| hypothetical protein T ( 337) 942 222.3 1.3e-55 gi|156223591|gb|EDO44424.1| predicted protein [Nem ( 318) 937 221.1 2.6e-55 gi|115936511|ref|XP_001184959.1| PREDICTED: hypoth ( 268) 882 208.6 1.3e-51 gi|224054750|ref|XP_002191596.1| PREDICTED: simila ( 755) 847 201.0 7.1e-49 gi|47215028|emb|CAG01852.1| unnamed protein produc ( 400) 841 199.4 1.1e-48 gi|194043819|ref|XP_001925034.1| PREDICTED: simila ( 372) 793 188.5 2e-45 gi|190624601|gb|EDV40125.1| GF10361 [Drosophila an ( 305) 706 168.7 1.5e-39 gi|10726918|gb|AAF51642.2| CG4365, isoform A [Dros ( 305) 686 164.2 3.5e-38 gi|116785554|gb|ABK23771.1| unknown [Picea sitchen ( 258) 683 163.4 5e-38 gi|162679331|gb|EDQ65780.1| predicted protein [Phy ( 260) 683 163.4 5e-38 gi|210081919|gb|EEA30715.1| hypothetical protein B ( 279) 679 162.6 9.9e-38 gi|193919915|gb|EDW18782.1| GI13415 [Drosophila mo ( 301) 679 162.6 1.1e-37 gi|194155239|gb|EDW70423.1| GJ11540 [Drosophila vi ( 305) 677 162.1 1.5e-37 gi|194112675|gb|EDW34718.1| GL12815 [Drosophila pe ( 305) 677 162.1 1.5e-37 gi|198151486|gb|EAL30517.2| GA18136 [Drosophila ps ( 305) 676 161.9 1.7e-37 gi|115891513|ref|XP_783848.2| PREDICTED: similar t ( 258) 666 159.6 7.2e-37 gi|194181512|gb|EDW95123.1| GE19707 [Drosophila ya ( 348) 665 159.5 1.1e-36 gi|194122228|gb|EDW44271.1| GM22320 [Drosophila se ( 348) 665 159.5 1.1e-36 gi|23094188|gb|AAN12145.1| CG4365, isoform C [Dros ( 348) 665 159.5 1.1e-36 gi|194197713|gb|EDX11289.1| GD14908 [Drosophila si ( 348) 665 159.5 1.1e-36 gi|91088179|ref|XP_972438.1| PREDICTED: similar to ( 302) 664 159.2 1.1e-36 gi|115717559|ref|XP_001199145.1| PREDICTED: hypoth ( 211) 662 158.6 1.2e-36 gi|190655322|gb|EDV52565.1| GG16137 [Drosophila er ( 348) 663 159.0 1.5e-36 >>gi|158564323|sp|Q69ZP3.2|PNKD_MOUSE RecName: Full=Prob (385 aa) initn: 2629 init1: 2629 opt: 2629 Z-score: 3222.8 bits: 605.1 E(): 8.3e-171 Smith-Waterman score: 2629; 100.000% identity (100.000% similar) in 385 aa overlap (4-388:1-385) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG 300 310 320 330 340 350 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK :::::::::::::::::::::::::::: gi|158 PGPTSDDGCSRAQLLEELRRLKDMHKSK 360 370 380 >>gi|197927180|ref|NP_001128222.1| myofibrillogenesis re (385 aa) initn: 2614 init1: 2614 opt: 2614 Z-score: 3204.4 bits: 601.7 E(): 8.8e-170 Smith-Waterman score: 2614; 99.221% identity (99.740% similar) in 385 aa overlap (4-388:1-385) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 MAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|197 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRFPKGHSKTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG :::::::::::.::::::::::::::::::::::::::::::::::::::: :::::::: gi|197 LGFAGVVEPENVARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLALQEALGPG 300 310 320 330 340 350 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK :::::::::::::::::::::::::::: gi|197 PGPTSDDGCSRAQLLEELRRLKDMHKSK 360 370 380 >>gi|90080856|dbj|BAE89909.1| unnamed protein product [M (385 aa) initn: 2528 init1: 2528 opt: 2528 Z-score: 3099.0 bits: 582.2 E(): 6.6e-164 Smith-Waterman score: 2528; 96.364% identity (98.442% similar) in 385 aa overlap (4-388:1-385) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS :::::::::::::::::::::::::.::::::::.::::::::::::: :::::::: gi|900 MAAVVAATALKGRGARNARVLRGILAGATANKASHNRTRALQSHSSPEGKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH ::::::::::::::::::::::: :::::::::::::::::::: :.::::::::::::: gi|900 GVKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::.:::::::::::: ::::::::::::::::: gi|900 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLGLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG :::::::::::::::::::::::::.:::.::::::::::.:::::::::: :::::::: gi|900 LGFAGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFLRTHCLALQEALGPG 300 310 320 330 340 350 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK ::::.:: :::::::::::::::::::: gi|900 PGPTGDDDCSRAQLLEELRRLKDMHKSK 360 370 380 >>gi|158563846|sp|Q8N490.2|PNKD_HUMAN RecName: Full=Prob (385 aa) initn: 2512 init1: 2512 opt: 2512 Z-score: 3079.4 bits: 578.6 E(): 8.2e-163 Smith-Waterman score: 2512; 96.104% identity (98.182% similar) in 385 aa overlap (4-388:1-385) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS :::::::::::::::::::::::::.::::::::.::::::::::::: :::::::: gi|158 MAAVVAATALKGRGARNARVLRGILAGATANKASHNRTRALQSHSSPEGKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH ::::::::::::::::::::::: :::::::::::::::::::: :.::::::::::::: gi|158 GVKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::.:::::::::::: ::::::::::::::::: gi|158 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLGLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG :::::::::::::::::::::::::.:::.::::::::::.:::::::::: :::::::: gi|158 LGFAGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFLRTHCLALQEALGPG 300 310 320 330 340 350 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK ::::.:: ::::::::::::::::::: gi|158 PGPTGDDDYSRAQLLEELRRLKDMHKSK 360 370 380 >>gi|160419155|sp|A7YY46.1|PNKD_BOVIN RecName: Full=Prob (385 aa) initn: 2508 init1: 2508 opt: 2508 Z-score: 3074.5 bits: 577.6 E(): 1.5e-162 Smith-Waterman score: 2508; 95.584% identity (98.701% similar) in 385 aa overlap (4-388:1-385) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS :::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|160 MAAVVAATALKGRGARNARVLRGILSGATANKASQNRSRALQSHSSPECKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN ::::::::::::::::::::::::::::: ::::::::::::::::::::::.::::::: gi|160 PELEYIPRKRGKNPMKAVGLAWYSLYTRTRLGYLFYRQQLRRARNRYPKGHSRTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH ::::::::::::::::::::::: ::::::::::.::::::::: ::::::::::::::: gi|160 GVKVLPIPVLSDNYSYLIIDTQARLAVAVDPSDPQAVQASIEKEGVNLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::.::::::::::.::::::::::::::::::::::::::::::::::::: gi|160 SGGNRDLSRRHQDCRVYGSPQDSIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN ::::::.::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|160 LDGEPYEGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLGLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG ::::::::::::::::::::::::::::::::::::::::.:::::::::: :::::::. gi|160 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERSYNPFLRTHCLVLQEALGPS 300 310 320 330 340 350 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK ::::.:::::::::::.::.:::.:::: gi|160 PGPTGDDGCSRAQLLERLRQLKDLHKSK 360 370 380 >>gi|149711093|ref|XP_001491335.1| PREDICTED: paroxysmal (385 aa) initn: 2489 init1: 2489 opt: 2489 Z-score: 3051.2 bits: 573.3 E(): 3e-161 Smith-Waterman score: 2489; 94.805% identity (97.662% similar) in 385 aa overlap (4-388:1-385) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|149 MAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPESLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN ::::::::.::.::::::::::::::::::::::::::::::::::::::::.::::::: gi|149 PELEYIPRRRGRNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSRTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH :::::::::::::::::::: :: ::::::::::.::::::::: : ::::::::::::: gi|149 GVKVLPIPVLSDNYSYLIIDIQARLAVAVDPSDPQAVQASIEKEGVALVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::.::::::::.::::::::::::::::::::::::::::::::::::::: gi|149 SGGNRDLSRRHQDCRVYGSPEDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|149 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLGLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG ::::::::::::::::::::::::::::::::::::::::.:::::::::: :::::::: gi|149 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERSYNPFLRTHCLVLQEALGPG 300 310 320 330 340 350 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK : :..::: :::::::.::::::.:::: gi|149 PDPAGDDGYSRAQLLEKLRRLKDVHKSK 360 370 380 >>gi|22209034|gb|AAH36457.1| Paroxysmal nonkinesigenic d (385 aa) initn: 2488 init1: 2488 opt: 2488 Z-score: 3049.9 bits: 573.1 E(): 3.6e-161 Smith-Waterman score: 2488; 95.325% identity (97.922% similar) in 385 aa overlap (4-388:1-385) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS :::::::::::.:::::::::::::.::::::.:.::::::::::: : :::::::: gi|222 MAAVVAATALKSRGARNARVLRGILAGATANKVSHNRTRALQSHSSSEGKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH ::::::::::::::::::::::: :::::::::::::::::::: :.::::::::::::: gi|222 GVKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::.:::::::::::: ::::::::::::::::: gi|222 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLGLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG :::::::::::::::::::::::::.:::.::::::::::.:::::::::: :::::::: gi|222 LGFAGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFLRTHCLALQEALGPG 300 310 320 330 340 350 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK ::::.:: ::::::::::::::::::: gi|222 PGPTGDDDYSRAQLLEELRRLKDMHKSK 360 370 380 >>gi|148667897|gb|EDL00314.1| mCG114807, isoform CRA_b [ (347 aa) initn: 2228 init1: 2228 opt: 2230 Z-score: 2734.2 bits: 514.5 E(): 1.4e-143 Smith-Waterman score: 2230; 98.503% identity (98.802% similar) in 334 aa overlap (4-337:1-334) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG ::::::::::::::::::::::::::::::: . : gi|148 LGFAGVVEPENLARERKMQWVQRQRMERKSTVSQQRGGHPPPTLHHPLHH 300 310 320 330 340 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK >>gi|195539910|gb|AAI68228.1| Pnkd protein [Rattus norve (369 aa) initn: 2247 init1: 2220 opt: 2223 Z-score: 2725.2 bits: 513.0 E(): 4.3e-143 Smith-Waterman score: 2226; 89.920% identity (92.042% similar) in 377 aa overlap (4-378:1-362) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 MAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|195 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRFPKGHSKTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG :::::::::::.::::::::::::::::::: : :. .: : gi|195 LGFAGVVEPENVARERKMQWVQRQRMERKSTVRPGGWEGRGGKP---------------G 300 310 320 330 340 370 380 mKIAA1 PGPTSDDGC-SRA-QLLEELRRLKDMHKSK : :.: : .:: .:. :: gi|195 PHPASTYHCPARACKLFLELWPLTAGV 350 360 >>gi|149016096|gb|EDL75342.1| rCG23920, isoform CRA_a [R (388 aa) initn: 2220 init1: 2220 opt: 2220 Z-score: 2721.3 bits: 512.3 E(): 7.2e-143 Smith-Waterman score: 2220; 99.390% identity (100.000% similar) in 328 aa overlap (4-331:1-328) 10 20 30 40 50 60 mKIAA1 DPNMAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MAAVVAATALKGRGARNARVLRGILSGATANKASQNRTRALQSHSSPECKEEPEPLS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFN ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 PELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRFPKGHSKTQPRLFN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQASIEKERVNLVAILCTHKHWDH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LDGEPYKGPSCLFSGDLLFLSGCGRTFEGTAETMLSSLDTVLDLGDDTLLWPGHEYAEEN 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 LGFAGVVEPENLARERKMQWVQRQRMERKSTCPSTLGEERAYNPFLRTHCLELQEALGPG :::::::::::.::::::::::::::::::: gi|149 LGFAGVVEPENVARERKMQWVQRQRMERKSTGEHTHHPHLAILFITNPTTTIGALGSTNP 300 310 320 330 340 350 370 380 mKIAA1 PGPTSDDGCSRAQLLEELRRLKDMHKSK gi|149 PDWPERAEPGQWDLEEEAVGGSETPRRTDGV 360 370 380 388 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 02:43:48 2009 done: Fri Mar 13 02:50:12 2009 Total Scan time: 874.120 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]