FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0987.ptfa, 851 aa vs ./tmplib.26680 library 1768166 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.3813+/-0.00682; mu= 1.8908+/- 0.453 mean_var=243.0473+/-59.829, 0's: 0 Z-trim: 5 B-trim: 4 in 1/35 Lambda= 0.0823 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0338 ( 907 res) mbg08118 ( 907) 1536 196 2.1e-50 mKIAA4056 ( 844 res) mfj33372 ( 844) 1377 177 9.4e-45 mKIAA1548 ( 789 res) mpm02067 ( 789) 673 93 1.3e-19 >>mKIAA0338 ( 907 res) mbg08118 (907 aa) initn: 1835 init1: 1490 opt: 1536 Z-score: 997.4 bits: 195.7 E(): 2.1e-50 Smith-Waterman score: 1546; 39.671% identity (51.524% ungapped) in 852 aa overlap (1-850:209-866) 10 20 30 mKIAA0 AQLSEDITRYYLCLQLRDDIVSGRLPCSFV :::.::::::::::::: ::..:::::::: mKIAA0 WLDPSKEIKKQIRSSPWNFAFTVKFYPPDPAQLTEDITRYYLCLQLRADIITGRLPCSFV 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 TLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAE : ::::::.::.:::::: .: ..:.::.:::::.:.:::....::::..:::::.::: mKIAA0 THALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAE 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 MHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYK .::::::::::::::::::::::::..:::::::.::::::::::::::::::.:::::: mKIAA0 IHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 RNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLG :.::::::::::.:::::::::::::::.::::::::.::::::::. :: ::: ::..: mKIAA0 RSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMG 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 SKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGEVGTGQYATTKGISQTN ::::::::::::::.::::::::::.::::::::::::::::: .... ..:... mKIAA0 SKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDG----AEFSRPASVSENH 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 LITTVTPEKKAEEERVEEEDRRKKAEEATPVTALRHEGKSPPGHGAADSCPPSPPSAHPD . :: .:. .: ::..:::. : :. . mKIAA0 ---DAGPEGDKREDDAESGGRRSEAEEGEVRT----------------------PTKIKE 480 490 500 340 350 360 370 380 390 mKIAA0 PPPPTELRRRCKEKERAEPSSLESEAQGKAYLGDQDVAFSYRQPAGKGTTLFSFSLQLPE : : : :.. .: .:: .... .. .. .:. :. mKIAA0 LKPEQETTPRHKQEFLDKP---------------EDVLLKHQASINE----LKRTLKEPN 510 520 530 540 550 400 410 420 430 440 450 mKIAA0 SFPSLLDEDGYLSFPNLSETNLLPQSWQHFLPIRSPSLLPCFLFIFFFLLSASFSVPYAL : .:. .: . .. ::.: : ::: : . mKIAA0 S--KLIHRDR-----DWDRERRLPSS-----PA-SPS-------------------PKGT 560 570 460 470 480 490 500 510 mKIAA0 TLSFPLALCLCYLEPKAASLSASLDNDPSDSSEEETDSERTDTAADGETSATESDQEEDA :. :: :.: ..:::.. : : ... . ..:::.:: mKIAA0 --------------PEKASERAGL----REGSEEKVKPPRP-RAPESDMGDEDQDQERDA 580 590 600 610 520 530 540 550 560 570 mKIAA0 EIKAQDLDKTQDELMKHQTNISELKRTFLETSTETALTNEWEKRLSTSPVRLAARQEDAP . : .. . .. ..:. . . ::. .. .. .... .. :: mKIAA0 VF----LKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDYH----------GGAFEDFS 620 630 640 650 660 580 590 600 610 620 630 mKIAA0 MIEPLVPEETKQSSGEKLMDGSEILSLLESARKPTEFIGGVSSTTQSWVQKLETKTEPVE : . .. ..: : :. ... :.. . . ::. .. : . mKIAA0 RSLPELDRDKSDSETEGLVFAQD----LKGPSSQEDESGGLEDS-------------PDR 670 680 690 700 640 650 660 670 680 690 mKIAA0 AEVESTPHPQPLSTEKVLQETILVEERHVMSVHASGDASHTARDEVDAAESTPTDRRHTG . . :: :.: ::. : .... . . ...:.::.:: .: mKIAA0 GACSTPEMPQ---FESVKAETMTVSS---LAIRKKIEPEAMLQSRVSAADSTQVD----- 710 720 730 740 750 700 710 720 730 740 750 mKIAA0 KGKEGSSVTEAAKEQRGEEVDQSAPEQEQPATVSHEEEQASTIRTSEGLEQKSHFESSTV :. : .:. ...: :.: : .......: mKIAA0 ----GG--TPMVKDF------MTTPPCITTETISTTME--NSLKSGKG------------ 760 770 780 790 760 770 780 790 800 mKIAA0 RVESTSVGSISPGGAKLEISTKEVPVVHTETKTITYESSQVDP--GADLEPGVLMSAQTI .... :: : .:.. : ...: : : :: :. mKIAA0 ------AAAMIPG-----------P------QTVATEIRSLSPIIGKD----VLTSTYGA 800 810 820 810 820 830 840 850 mKIAA0 TSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQE :.:: ::.::::.:::::::.:::::::::.:::: :.:.:: mKIAA0 TAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLV 830 840 850 860 870 880 mKIAA0 TKAVVYRETDPSPEERDKKPQES 890 900 >>mKIAA4056 ( 844 res) mfj33372 (844 aa) initn: 1544 init1: 1108 opt: 1377 Z-score: 895.8 bits: 176.8 E(): 9.4e-45 Smith-Waterman score: 1379; 62.079% identity (65.579% ungapped) in 356 aa overlap (1-340:335-687) 10 20 30 mKIAA0 AQLSEDITRYYLCLQLRDDIVSGRLPCSFV :::.:::::::::::::.:::.:::::::. mKIAA4 WLDSAKEIKKQVRGVPWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFA 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA0 TLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAE :::::::::.:::::::::. : ::.:.:..:::.:::::.::.:::::.:.::::.:. mKIAA4 TLALLGSYTIQSELGDYDPELHGMDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQAD 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA0 MHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYK ..::::::::::::::::.::: :::.:.::::.::::.:.:.:::::: :::::::::: mKIAA4 LEFLENAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKVLKISYK 430 440 450 460 470 480 160 170 180 190 200 mKIAA0 RNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPK-KFLTL :..:.::::::: :..:::::::::..::::.:::::::::::::: .. :: :::.: mKIAA4 RSSFFIKIRPGEQEHYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTDTIPKSKFLAL 490 500 510 520 530 540 210 220 230 240 250 260 mKIAA0 GSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGEVG------TGQYATT :::::::::::::::.::::::::::.:::..::: :::::: .. . . ... mKIAA4 GSKFRYSGRTQAQTRQASALIDRPAPHFERTASKR--ASRSLDGAAAAESTDRSPRPTSA 550 560 570 580 590 600 270 280 290 300 310 mKIAA0 KGISQTNLITTV-TPEKKAEEERVEEEDRR--KKAE--EATPVTALRHEGKS----PPGH .:.:... .: ::. .: :. :..: . :: : :. : . :: : mKIAA4 PAIAQSQVTEGPGAPIKKTPKEAVKVEEKRGEEPAEPAEPEPTEAWKDLDKSQEEIKKHH 610 620 630 640 650 660 320 330 340 350 360 370 mKIAA0 GAADSCPPSPPSAHPDPPPPTELRRRCKEKERAEPSSLESEAQGKAYLGDQDVAFSYRQP .. . . . :.: : .: .: mKIAA4 ASISELKKNFMESVPEPRP-SEWDKRLSTHSPFRTLNINGQVPTGDGPPLVKTQTVTISD 670 680 690 700 710 720 >>mKIAA1548 ( 789 res) mpm02067 (789 aa) initn: 668 init1: 467 opt: 673 Z-score: 444.6 bits: 93.2 E(): 1.3e-19 Smith-Waterman score: 673; 41.603% identity (42.913% ungapped) in 262 aa overlap (3-259:180-438) 10 20 30 mKIAA0 AQLSEDITRYYLCLQLRDDIVSGRLPCSFVTL : :..::: . :::..::.::.: : : : mKIAA1 GTKSIKKQVKIGSPYCLHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLECPFDTA 150 160 170 180 190 200 40 50 60 70 80 90 mKIAA0 ALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMH . :..:..:.:::::: : . . .:::::.: .:.:.: ..: : .::.:::.:: . mKIAA1 VQLAAYNLQAELGDYDLAEHSPELVSEFRFVPIQTEEMELAIFEKWKEYRGQTPAQAETN 210 220 230 240 250 260 100 110 120 130 140 150 mKIAA0 FLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRN .:..:: : :::::.: .: .: . ::. .:.:... . .:. : :::. ....:.: mKIAA1 YLNKAKWLEMYGVDMHVVKARDGNDYSLGLTPTGVLVFEGETKIGLFFWPKITRLDFKKN 270 280 290 300 310 320 160 170 180 190 200 mKIAA0 NFYIKI--RPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKK---FL .. . . . .. : :. :.: . .: :.::: ::::.:::: : .. :. mKIAA1 KLTLVVVEDDDQGKEQEHTFVFRLDHPKACKHLWKCAVEHHAFFRLRGPVQKSSHRSGFI 330 340 350 360 370 380 210 220 230 240 250 260 mKIAA0 TLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGEVGTGQYATTKGIS :::.:::::.:. :: ... : . ::: ::::. :.:. ...: : mKIAA1 RLGSRFRYSGKTEYQTTKTNKA--RRSTSFERRPSKRYS-RRTLQMKASTTQPEDLGRFS 390 400 410 420 430 440 270 280 290 300 310 320 mKIAA0 QTNLITTVTPEKKAEEERVEEEDRRKKAEEATPVTALRHEGKSPPGHGAADSCPPSPPSA mKIAA1 SLLYSVLNASAQKSDSQQAWGVMSPVPVTSSSSCGAVQVEIENLPQTSATEQHDRKCLPL 450 460 470 480 490 500 851 residues in 1 query sequences 1768166 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:33:25 2006 done: Mon Mar 27 10:33:26 2006 Scan time: 0.960 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]