FASTA searches a protein or DNA sequence data bank
 version 3.4t11 Apr 17, 2002
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 ../query/mKIAA1662.ptfa, 616 aa
 vs ./tmplib.26680 library

1768401 residues in  2168 sequences
  Expectation_n fit: rho(ln(x))= 8.5731+/-0.00687; mu= -0.5726+/- 0.451
 mean_var=314.7920+/-76.821, 0's: 0 Z-trim: 7  B-trim: 25 in 1/35
 Lambda= 0.0723

FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 38, opt: 26, open/ext: -10/-2, width:  16
The best scores are:                                       opt bits E(2168)
mKIAA0864  ( 1755 res)   mbg01753                  (1755)  794   97 1.4e-20


>>mKIAA0864  ( 1755 res)   mbg01753                       (1755 aa)
 initn: 615 init1: 289 opt: 794  Z-score: 461.7  bits: 97.1 E(): 1.4e-20
Smith-Waterman score: 794;  44.516% identity (47.917% ungapped) in 310 aa overlap (314-607:1390-1693)

           290       300       310       320       330             
mKIAA1 ELEKLPLRENKRVPLTALLNQAHNDRRGPTSDSHEALEKEVQSLRAQLEAWR-------L
                                     ..:  .:....: :.::. . :       :
mKIAA0 ALSLYQPSHPDSSLAPGPSEPRAVPAAKDEAESMSGLRERIQELEAQMGVMREELGHKEL
    1360      1370      1380      1390      1400      1410         

        340       350       360        370       380       390     
mKIAA1 RGEAPQNAPRLQEDSHIPPGYISQEA-CERSLAEMESSHQQVMEQLQRHHERELQRLQQE
       .:..     . :.:      . : .: :::..: :: .::. .:.:::.:.:::..:..:
mKIAA0 EGDVAALQEKYQRD------FESLKATCERGFAAMEETHQKKIEDLQRQHQRELEKLREE
    1420      1430            1440      1450      1460      1470   

         400       410       420       430            440       450
mKIAA1 KEWLLAEETAATASAIEAMKKAYQEELSRELSKTR-----SLQQGPESLRKQHQLDMEAL
       :. ::::::::: :::::::.:..::. ::: :..     :...  :.::.:.  .....
mKIAA0 KDRLLAEETAATISAIEAMKNAHREEMERELEKSQRSQISSINSDIEALRRQYLEELQSV
          1480      1490      1500      1510      1520      1530   

              460       470       480       490       500       510
mKIAA1 KQELQVLSERYSQKCLEIGALTRQAEEREHTLRRCQQEGQELLRHNQELHSHLSEEIDRL
       ..::.::::.::::::: . :..  : ....::.::.:.:::  :::::...:. :: ::
mKIAA0 QRELEVLSEQYSQKCLENAHLAQALEAERQALRQCQRENQELNAHNQELNNRLAAEITRL
          1540      1550      1560      1570      1580      1590   

              520         530       540       550       560        
mKIAA1 RSFIASQGTGNSCG--RSNERSSCELEVLLRVKENELQYLKKEVQCLRDELQVIQKDKRF
       :......: :.: :   .. ... ::::::::::.:.::::.:.. :.::::.  .::..
mKIAA0 RTLLTGDGGGESTGLPLTQGKDAYELEVLLRVKESEIQYLKQEISSLKDELQTALRDKKY
          1600      1610      1620      1630      1640      1650   

       570       580       590       600       610                 
mKIAA1 -TGKYQDVYVELNHIKTRSEREIEQLKEHLRLAMAALQEKEAVRNSLAE           
        . ::.:.:.::.  :.... .: .:::.:. :  :: ::                    
mKIAA0 ASDKYKDIYTELSIAKAKADCDISRLKEQLKAATEALGEKSPEGTTVSGYDIMKSKSNPD
          1660      1670      1680      1690      1700      1710   

mKIAA0 FLKKDRSCVTRQLRNIRSKSLKEGLTVQERLKLFESRDLKKD
          1720      1730      1740      1750     




616 residues in 1 query   sequences
1768401 residues in 2168 library sequences
 Scomplib [34t11]
 start: Mon Mar 27 10:50:26 2006 done: Mon Mar 27 10:50:27 2006
 Scan time:  0.830 Display time:  0.040

Function used was FASTA [version 3.4t11 Apr 17, 2002]