# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj71352.fasta.nr -Q ../query/mKIAA4232.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4232, 696 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920966 sequences Expectation_n fit: rho(ln(x))= 5.7121+/-0.000184; mu= 10.1607+/- 0.010 mean_var=76.6819+/-15.051, 0's: 24 Z-trim: 27 B-trim: 2 in 1/65 Lambda= 0.146463 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148693929|gb|EDL25876.1| chondroitin sulfate pr (2327) 4339 926.8 0 gi|17225630|gb|AAL37505.1|AF352400_1 AN2/NG2 prote (2327) 4299 918.3 0 gi|78099967|sp|Q8VHY0.2|CSPG4_MOUSE RecName: Full= (2327) 4299 918.3 0 gi|8469184|sp|Q00657.2|CSPG4_RAT RecName: Full=Cho (2326) 4172 891.5 0 gi|560570|gb|AAB31872.1| chondroitin sulfate prote (1612) 3790 810.7 0 gi|194206442|ref|XP_001493494.2| PREDICTED: chondr (2321) 3693 790.3 0 gi|119619645|gb|EAW99239.1| chondroitin sulfate pr (2322) 3674 786.3 0 gi|74710277|sp|Q6UVK1.1|CSPG4_HUMAN RecName: Full= (2322) 3674 786.3 0 gi|1617314|emb|CAA65529.1| melanoma-associated cho (2322) 3667 784.8 0 gi|114658239|ref|XP_001144835.1| PREDICTED: melano (2322) 3652 781.6 0 gi|119913814|ref|XP_613126.3| PREDICTED: similar t (2319) 3599 770.4 0 gi|74001019|ref|XP_544783.2| PREDICTED: similar to (2734) 3593 769.2 0 gi|149041748|gb|EDL95589.1| chondroitin sulfate pr (1503) 3210 688.1 5.9e-195 gi|194039704|ref|XP_001927173.1| PREDICTED: chondr (2290) 2120 457.9 1.8e-125 gi|189537237|ref|XP_001923457.1| PREDICTED: chondr (2015) 1583 344.4 2.3e-91 gi|118095577|ref|XP_423277.2| PREDICTED: similar t (2239) 1579 343.6 4.6e-91 gi|47225922|emb|CAF98402.1| unnamed protein produc (2067) 1570 341.7 1.6e-90 gi|126316681|ref|XP_001380946.1| PREDICTED: hypoth (1721) 1498 326.4 5.2e-86 gi|194676509|ref|XP_608817.4| PREDICTED: similar t (2520) 1490 324.8 2.3e-85 gi|148686443|gb|EDL18390.1| mCG118705 [Mus musculu (1725) 1480 322.6 7.3e-85 gi|47226581|emb|CAG08597.1| unnamed protein produc (1648) 1479 322.4 8.1e-85 gi|73954230|ref|XP_546320.2| PREDICTED: similar to (2432) 1448 315.9 1.1e-82 gi|148725338|emb|CAN87781.1| novel protein similar (2369) 1440 314.2 3.3e-82 gi|125817010|ref|XP_696176.2| PREDICTED: novel pro (2389) 1440 314.2 3.4e-82 gi|66500770|ref|XP_396231.2| PREDICTED: similar to (2180) 1103 243.0 8.5e-61 gi|212509455|gb|EEB12838.1| Chondroitin sulfate pr (2347) 1074 236.9 6.3e-59 gi|198432769|ref|XP_002120318.1| PREDICTED: simila (2518) 1061 234.2 4.5e-58 gi|91076120|ref|XP_969680.1| PREDICTED: similar to (2315) 1040 229.7 9.1e-57 gi|74187747|dbj|BAE24538.1| unnamed protein produc ( 825) 1023 225.9 4.6e-56 gi|156553472|ref|XP_001599803.1| PREDICTED: simila (2387) 925 205.4 1.9e-49 gi|157014839|gb|EAA12258.4| AGAP008400-PA [Anophel (2322) 845 188.5 2.3e-44 gi|108882817|gb|EAT47042.1| conserved hypothetical (2345) 816 182.4 1.6e-42 gi|167874178|gb|EDS37561.1| conserved hypothetical (2337) 801 179.2 1.5e-41 gi|149059364|gb|EDM10371.1| similar to BC067074 pr (1345) 751 168.5 1.4e-38 gi|198138283|gb|EAL33645.2| GA10211 [Drosophila ps (2402) 749 168.2 3e-38 gi|194106770|gb|EDW28813.1| GL18745 [Drosophila pe (2404) 749 168.2 3e-38 gi|190615312|gb|EDV30836.1| GF14840 [Drosophila an (2343) 745 167.4 5.3e-38 gi|169209132|ref|XP_001715344.1| PREDICTED: simila ( 292) 728 163.3 1.1e-37 gi|22946753|gb|AAF53672.2| kon-tiki [Drosophila me (2355) 737 165.7 1.7e-37 gi|126566032|gb|ABO20847.1| Kon-tiki [Drosophila m (2381) 737 165.7 1.7e-37 gi|193674175|ref|XP_001951117.1| PREDICTED: simila (2266) 731 164.4 4e-37 gi|194191803|gb|EDX05379.1| GD21830 [Drosophila si (2174) 729 164.0 5.2e-37 gi|194176677|gb|EDW90288.1| GE12728 [Drosophila ya (2355) 729 164.0 5.6e-37 gi|193912682|gb|EDW11549.1| GI17201 [Drosophila mo (2366) 729 164.0 5.6e-37 gi|190657566|gb|EDV54779.1| GG21705 [Drosophila er (3006) 727 163.6 9.1e-37 gi|194134113|gb|EDW55629.1| GM17085 [Drosophila se (2355) 723 162.7 1.3e-36 gi|194161714|gb|EDW76615.1| GK14569 [Drosophila wi (3590) 720 162.2 3e-36 gi|194149263|gb|EDW64961.1| GJ19831 [Drosophila vi (2393) 714 160.8 5.1e-36 gi|72016397|ref|XP_787050.1| PREDICTED: similar to (2348) 647 146.7 9.1e-32 gi|189524119|ref|XP_685748.3| PREDICTED: similar t (1745) 612 139.2 1.2e-29 >>gi|148693929|gb|EDL25876.1| chondroitin sulfate proteo (2327 aa) initn: 4480 init1: 4327 opt: 4339 Z-score: 4942.8 bits: 926.8 E(): 0 Smith-Waterman score: 4339; 95.971% identity (97.122% similar) in 695 aa overlap (1-688:999-1693) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTI :::::::::::::::::::::::::::::: gi|148 DLLHGRLVYQHDDSETIEDDIPFVATRQGEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTI 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 EDLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|148 EDLRKKQVLFVHSGADHGWLQLQVSDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDA 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 SGPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SGPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV 1570 1580 1590 1600 1610 1620 640 650 660 670 680 mKIAA4 RGPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHH---TDP---NLTSGGCQLEHPPH :::::::::::::::::::::::::::: : ..: .: ..: . : : :: gi|148 RGPQLGRLLHAQQGSAEEVLVNFTQAEVNAGNILYEHEMSSEPFWEAHDTIGLLLSSPPA 1630 1640 1650 1660 1670 1680 690 mKIAA4 WQLASLDPVPAQG .::. gi|148 RDLAATLAVMVSFDAACPQRPSRLWKNKGLWVPEGQRAKITVAALDAANLLASVPASQRS 1690 1700 1710 1720 1730 1740 >>gi|17225630|gb|AAL37505.1|AF352400_1 AN2/NG2 proteogly (2327 aa) initn: 4482 init1: 4287 opt: 4299 Z-score: 4897.1 bits: 918.3 E(): 0 Smith-Waterman score: 4299; 95.396% identity (96.835% similar) in 695 aa overlap (1-688:999-1693) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTI :::::::::::::::::::::::::::::: gi|172 DLLHGRLVYQHDDSETIEDDIPFVATRQGEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTI 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|172 SRVFHVARGGQRLLTTDDVAFSDADSGFSVAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 EDLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|172 EDLRKKQVLFVHSGADHGWLQLQVSDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDA :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|172 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSRREVEEQLIRYVHDGSETQTDA 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 SGPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|172 SGPEDLVYTIEEPSNGRIALRVAPDTEVHRFTQAQLDGGLVLFSHRGALEGGFHFDLSDG 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV 1570 1580 1590 1600 1610 1620 640 650 660 670 680 mKIAA4 RGPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHH---TDP---NLTSGGCQLEHPPH :::::::::::::::::::::::::::: : ..: .: ..: . : : :: gi|172 RGPQLGRLLHAQQGSAEEVLVNFTQAEVNAGNILYEHEMSSEPFWEAHDTIGLLLSSPPA 1630 1640 1650 1660 1670 1680 690 mKIAA4 WQLASLDPVPAQG .::. gi|172 RDLAATLAVMVSFDAACPQRPSRLWKNKGLWVPEGQRAKITVAALDAANLLASVPASQRS 1690 1700 1710 1720 1730 1740 >>gi|78099967|sp|Q8VHY0.2|CSPG4_MOUSE RecName: Full=Chon (2327 aa) initn: 4482 init1: 4287 opt: 4299 Z-score: 4897.1 bits: 918.3 E(): 0 Smith-Waterman score: 4299; 95.396% identity (96.835% similar) in 695 aa overlap (1-688:999-1693) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTI :::::::::::::::::::::::::::::: gi|780 DLLHGRLVYQHDDSETIEDDIPFVATRQGEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTI 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|780 SRVFHVARGGQRLLTTDDVAFSDADSGFSVAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 EDLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|780 EDLRKKQVLFVHSGADHGWLQLQVSDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDA :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|780 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSRREVEEQLIRYVHDGSETQTDA 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 SGPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|780 SGPEDLVYTIEEPSNGRIALRVAPDTEVHRFTQAQLDGGLVLFSHRGALEGGFHFDLSDG 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV 1570 1580 1590 1600 1610 1620 640 650 660 670 680 mKIAA4 RGPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHH---TDP---NLTSGGCQLEHPPH :::::::::::::::::::::::::::: : ..: .: ..: . : : :: gi|780 RGPQLGRLLHAQQGSAEEVLVNFTQAEVNAGNILYEHEMSSEPFWEAHDTIGLLLSSPPA 1630 1640 1650 1660 1670 1680 690 mKIAA4 WQLASLDPVPAQG .::. gi|780 RDLAATLAVMVSFDAACPQRPSRLWKNKGLWVPEGQRAKITVAALDAANLLASVPASQRS 1690 1700 1710 1720 1730 1740 >>gi|8469184|sp|Q00657.2|CSPG4_RAT RecName: Full=Chondro (2326 aa) initn: 4327 init1: 4168 opt: 4172 Z-score: 4752.1 bits: 891.5 E(): 0 Smith-Waterman score: 4172; 94.453% identity (98.501% similar) in 667 aa overlap (1-666:998-1664) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTI :::::::::::::::::::::::::::::: gi|846 DLLHGRLVYQHDDSETIEDDIPFVATRQGEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTI 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|846 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 EDLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|846 EDLRKKQVLFVHSGADHGWLQLQVSDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG :::::::.:::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|846 TIDTAVLHLDTNLDIRSGNEVHYHVTAGPHWGQLLRDGQSVTSFSQRDLLDGAILYSHNG 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE :::::::::.:::::::::.: ::::::::::::::::::::.::::::::::::::::: gi|846 SLSPQDTLALSVAAGPVHTSTVLQVTIALEGPLAPLQLVQHKRIYVFQGEAAEIRRDQLE 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS :::::::::::::::::::::::::::::::::. :::::::: :::::.:::::::::: gi|846 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASADGPPSLDPVQRFSQEAINSGRVLYLHS 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|846 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLIQIT 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDA :::. ::::::::::::::::::::::. :::.::::::::::::::::::::::::::. gi|846 GPYLGTLPGLVLQVLEPPQHGALQKEDRPQDGTLSTFSWREVEEQLIRYVHDGSETQTDG 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND :.::::::::::::::.:::::::::::::::.::::::::::::::::::::::: :.: gi|846 FILLANASEMDRQSQPMAFTITILPVNDQPPVITTNTGLQIWEGAIVPIPPEALRGIDSD 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 SGPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG :::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::: gi|846 SGPEDLVYTIEQPSNGRIALRVAPDAEAHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV .:::::::::::::::.::::::.:::::::::::::::::::::::::.:::::::.:: gi|846 VHTSPGHFFRVVAQKQVLLSLEGSRKLTVCPESVQPLSSQSLSASSSTGSDPRHLLYQVV 1570 1580 1590 1600 1610 1620 640 650 660 670 680 mKIAA4 RGPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHHTDPNLTSGGCQLEHPPHWQLASL ::::::::::::::::::.::::::::: : ..: .: gi|846 RGPQLGRLLHAQQGSAEEALVNFTQAEVNAGNILYEHEISSEPFWEAHDTIGLLLSSSPA 1630 1640 1650 1660 1670 1680 690 mKIAA4 DPVPAQG gi|846 RDLAATLAVTVSFDAACPQRPSRLWRNKGLWVPEGQRAKITVAALDAANLLASVPASQRG 1690 1700 1710 1720 1730 1740 >>gi|560570|gb|AAB31872.1| chondroitin sulfate proteogly (1612 aa) initn: 4032 init1: 3790 opt: 3790 Z-score: 4318.3 bits: 810.7 E(): 0 Smith-Waterman score: 3790; 95.623% identity (98.990% similar) in 594 aa overlap (1-594:1019-1612) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTI :::::::::::::::::::::::::::::: gi|560 DLLHGRLVYQHDDSETIEDDIPFVATRQGEGSGDMAWEEVRGVFRVAIQPVNDHAPVQTI 990 1000 1010 1020 1030 1040 40 50 60 70 80 90 mKIAA4 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|560 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ 1050 1060 1070 1080 1090 1100 100 110 120 130 140 150 mKIAA4 EDLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|560 EDLRKKQVLFVHSGADHGWLQLQVSDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG 1110 1120 1130 1140 1150 1160 160 170 180 190 200 210 mKIAA4 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG :::::::.:::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|560 TIDTAVLHLDTNLDIRSGNEVHYHVTAGPHWGQLLRDGQSVTSFSQRDLLDGAILYSHNG 1170 1180 1190 1200 1210 1220 220 230 240 250 260 270 mKIAA4 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE :::::::::.:::::::::.: ::::::::::::::::::::.::::::::::::::::: gi|560 SLSPQDTLALSVAAGPVHTSTVLQVTIALEGPLAPLQLVQHKRIYVFQGEAAEIRRDQLE 1230 1240 1250 1260 1270 1280 280 290 300 310 320 330 mKIAA4 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS :::::::::::::::::::::::::::::::::. :::::::: :::::.:::::::::: gi|560 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASADGPPSLDPVQRFSQEAINSGRVLYLHS 1290 1300 1310 1320 1330 1340 340 350 360 370 380 390 mKIAA4 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|560 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLIQIT 1350 1360 1370 1380 1390 1400 400 410 420 430 440 450 mKIAA4 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDA :::::::::::::::::::::::::::. :::.::::::::::::::::::::::::::. gi|560 GPYFPTLPGLVLQVLEPPQHGALQKEDRPQDGTLSTFSWREVEEQLIRYVHDGSETQTDG 1410 1420 1430 1440 1450 1460 460 470 480 490 500 510 mKIAA4 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND :.::::::::::::::.:::::::::::::::.::::::::::::::::::::::: :.: gi|560 FILLANASEMDRQSQPMAFTITILPVNDQPPVITTNTGLQIWEGAIVPIPPEALRGIDSD 1470 1480 1490 1500 1510 1520 520 530 540 550 560 570 mKIAA4 SGPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG :::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::: gi|560 SGPEDLVYTIEQPSNGRIALRVAPDAEAHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG 1530 1540 1550 1560 1570 1580 580 590 600 610 620 630 mKIAA4 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV .:::::::::::::::.::::::. gi|560 VHTSPGHFFRVVAQKQVLLSLEGS 1590 1600 1610 >>gi|194206442|ref|XP_001493494.2| PREDICTED: chondroiti (2321 aa) initn: 3898 init1: 3685 opt: 3693 Z-score: 4205.1 bits: 790.3 E(): 0 Smith-Waterman score: 3693; 82.239% identity (94.478% similar) in 670 aa overlap (1-669:994-1663) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTI ::: :::::::::::::::::::::::::: gi|194 DLLHGQLVYQHDDSETTEDDIPFVATRQGEGSGGMAWEEVRGVFRVAIQPVNDHAPVQTI 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 SRVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQ .:::::::::.:::::::::::::::::.::::::::::::::::::..::::::::::: gi|194 NRVFHVARGGSRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYRFTQ 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 EDLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQG :::::..:::::::::.::.:::: ::::::::.::::::::::.:::.:.::::::::. gi|194 EDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSNLVVPQGGQS 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 TIDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNG :::::::.::::::::.:.::::::::::.:::::: :: .:.:::.::.:::::::::: gi|194 TIDTAVLHLDTNLDIRNGDEVHYHVTAGPRWGQLLRAGQPATAFSQQDLVDGAILYSHNG 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 SLSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLE ::::.::::::: ::::::.. ::::::::::::::.::::::::::::::::::::::: gi|194 SLSPRDTLAFSVEAGPVHTDATLQVTIALEGPLAPLHLVQHKKIYVFQGEAAEIRRDQLE 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VVQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHS ..:::::::::.::...::.::::: .:::..: : ::::::::::::::. :::::::: gi|194 AAQEAVLPADIVFSVKTPPSAGYLVTLSHGTTAAEAPSLDPVQSFSQEAVDEGRVLYLHS 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 RPGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQIT :: ::::.:::::::::: ::::. .::::::..:::..:::::::::::::::::..: gi|194 RPEAWSDTFSLDVASGLGTPLEGVLMELEVLPAAIPLEAQNFSVPEGGTRTLAPPLLRII 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 GPYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDA :::::::::: :::::::::::::.:. :: .:.::::::::.:::::::::::: ::. gi|194 GPYFPTLPGLNLQVLEPPQHGALQREEGPQDRTLGTFSWREVEQQLIRYVHDGSETLTDS 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 FVLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDND :::.:::::. :::.::::::::::::::::.::::::::.:::: :::: ::::::::: gi|194 FVLVANASEIGRQSHPVAFTITILPVNDQPPILTTNTGLQMWEGATVPIPTEALRGTDND 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 SGPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDG :::::::::::.:::::..:..:: ::.: :::::::. ::::::::::.:::::.:::: gi|194 SGPEDLVYTIERPSNGRVVLQAAPGTEIHSFTQAQLDGRLVLFSHRGALDGGFHFSLSDG 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 AHTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVV ::: ::::.:::::: ::::::.: ::.:: :.:::::::: ::::.:.::.::::::: gi|194 EHTSHGHFFHVVAQKQLLLSLEGSRTLTICPGSIQPLSSQSLRASSSAGTDPHHLLYRVV 1570 1580 1590 1600 1610 1620 640 650 660 670 680 mKIAA4 RGPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHHTDPNLTSGGCQLEHPPHWQLASL .::.::::..:::::. :.::::::::: : ..: .: : gi|194 QGPRLGRLFRAQQGSTGEALVNFTQAEVYAGNVLYEHEMPPEPFWEAHDALELLLSSPPA 1630 1640 1650 1660 1670 1680 690 mKIAA4 DPVPAQG gi|194 PDVAATLAVAVSFEAACPQHPSRLWRNKGLWVPEGQRAEITTAALDASNLLASVLSPQRP 1690 1700 1710 1720 1730 1740 >>gi|119619645|gb|EAW99239.1| chondroitin sulfate proteo (2322 aa) initn: 3870 init1: 3665 opt: 3674 Z-score: 4183.4 bits: 786.3 E(): 0 Smith-Waterman score: 3674; 82.212% identity (94.320% similar) in 669 aa overlap (2-669:995-1663) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTIS :::::::::::::::::::::::::::::: gi|119 LLRGRLVYQHDDSETTEDDIPFVATRQGESSGDMAWEEVRGVFRVAIQPVNDHAPVQTIS 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 RVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQE :.:::::::.:::::::::::::::::.::::::::::::::::::..:::::::::::: gi|119 RIFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYRFTQE 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 DLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQGT ::::..:::::::::.::.:::: ::::::::.::::::::::.:::.:::::::::::: gi|119 DLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGT 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 IDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNGS ::::::.::::::::::.::::::::::.::::.: :: .:.:::.::::::.::::::: gi|119 IDTAVLHLDTNLDIRSGDEVHYHVTAGPRWGQLVRAGQPATAFSQQDLLDGAVLYSHNGS 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 LSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLEV :::.::.:::: ::::::.. ::::::::::::::.::.::::::::::::::::::::. gi|119 LSPRDTMAFSVEAGPVHTDATLQVTIALEGPLAPLKLVRHKKIYVFQGEAAEIRRDQLEA 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHSR .:::: ::::.::..:::.::::::::.:: :.::::::::::::::::..::::::::: gi|119 AQEAVPPADIVFSVKSPPSAGYLVMVSRGALADEPPSLDPVQSFSQEAVDTGRVLYLHSR 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 PGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQITG : ::::.:::::::::: ::::. :::::::..:::..:::::::::. ::::::....: gi|119 PEAWSDAFSLDVASGLGAPLEGVLVELEVLPAAIPLEAQNFSVPEGGSLTLAPPLLRVSG 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 PYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDAF :::::: :: :::::::::::::::: : .::.:::: ::::::::::::::: ::.: gi|119 PYFPTLLGLSLQVLEPPQHGALQKEDGPQARTLSAFSWRMVEEQLIRYVHDGSETLTDSF 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 VLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDNDS ::.::::::::::.:::::.:.::::::::.::::::::.:::: .::: ::::.::.:: gi|119 VLMANASEMDRQSHPVAFTVTVLPVNDQPPILTTNTGLQMWEGATAPIPAEALRSTDGDS 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 GPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDGA : ::::::::::::::..:: :: :::. :::::::.:::::::::.:.:::.: :::: gi|119 GSEDLVYTIEQPSNGRVVLRGAPGTEVRSFTQAQLDGGLVLFSHRGTLDGGFRFRLSDGE 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 HTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVVR ::::::::::.::::.::::.:.. ::::: ::::::::.: ::::.:.::. ::::::: gi|119 HTSPGHFFRVTAQKQVLLSLKGSQTLTVCPGSVQPLSSQTLRASSSAGTDPQLLLYRVVR 1570 1580 1590 1600 1610 1620 640 650 660 670 680 690 mKIAA4 GPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHHTDPNLTSGGCQLEHPPHWQLASLD :::::::.:::: :. :.::::::::: : ..: .: : gi|119 GPQLGRLFHAQQDSTGEALVNFTQAEVYAGNILYEHEMPPEPFWEAHDTLELQLSSPPAR 1630 1640 1650 1660 1670 1680 mKIAA4 PVPAQG gi|119 DVAATLAVAVSFEAACPQRPSHLWKNKGLWVPEGQRARITVAALDASNLLASVPSPQRSE 1690 1700 1710 1720 1730 1740 >>gi|74710277|sp|Q6UVK1.1|CSPG4_HUMAN RecName: Full=Chon (2322 aa) initn: 3870 init1: 3665 opt: 3674 Z-score: 4183.4 bits: 786.3 E(): 0 Smith-Waterman score: 3674; 82.212% identity (94.320% similar) in 669 aa overlap (2-669:995-1663) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTIS :::::::::::::::::::::::::::::: gi|747 LLRGRLVYQHDDSETTEDDIPFVATRQGESSGDMAWEEVRGVFRVAIQPVNDHAPVQTIS 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 RVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQE :.:::::::.:::::::::::::::::.::::::::::::::::::..:::::::::::: gi|747 RIFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYRFTQE 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 DLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQGT ::::..:::::::::.::.:::: ::::::::.::::::::::.:::.:::::::::::: gi|747 DLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGT 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 IDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNGS ::::::.::::::::::.::::::::::.::::.: :: .:.:::.::::::.::::::: gi|747 IDTAVLHLDTNLDIRSGDEVHYHVTAGPRWGQLVRAGQPATAFSQQDLLDGAVLYSHNGS 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 LSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLEV :::.::.:::: ::::::.. ::::::::::::::.::.::::::::::::::::::::. gi|747 LSPRDTMAFSVEAGPVHTDATLQVTIALEGPLAPLKLVRHKKIYVFQGEAAEIRRDQLEA 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHSR .:::: ::::.::..:::.::::::::.:: :.::::::::::::::::..::::::::: gi|747 AQEAVPPADIVFSVKSPPSAGYLVMVSRGALADEPPSLDPVQSFSQEAVDTGRVLYLHSR 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 PGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQITG : ::::.:::::::::: ::::. :::::::..:::..:::::::::. ::::::....: gi|747 PEAWSDAFSLDVASGLGAPLEGVLVELEVLPAAIPLEAQNFSVPEGGSLTLAPPLLRVSG 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 PYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDAF :::::: :: :::::::::::::::: : .::.:::: ::::::::::::::: ::.: gi|747 PYFPTLLGLSLQVLEPPQHGALQKEDGPQARTLSAFSWRMVEEQLIRYVHDGSETLTDSF 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 VLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDNDS ::.::::::::::.:::::.:.::::::::.::::::::.:::: .::: ::::.::.:: gi|747 VLMANASEMDRQSHPVAFTVTVLPVNDQPPILTTNTGLQMWEGATAPIPAEALRSTDGDS 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 GPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDGA : ::::::::::::::..:: :: :::. :::::::.:::::::::.:.:::.: :::: gi|747 GSEDLVYTIEQPSNGRVVLRGAPGTEVRSFTQAQLDGGLVLFSHRGTLDGGFRFRLSDGE 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 HTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVVR ::::::::::.::::.::::.:.. ::::: ::::::::.: ::::.:.::. ::::::: gi|747 HTSPGHFFRVTAQKQVLLSLKGSQTLTVCPGSVQPLSSQTLRASSSAGTDPQLLLYRVVR 1570 1580 1590 1600 1610 1620 640 650 660 670 680 690 mKIAA4 GPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHHTDPNLTSGGCQLEHPPHWQLASLD :::::::.:::: :. :.::::::::: : ..: .: : gi|747 GPQLGRLFHAQQDSTGEALVNFTQAEVYAGNILYEHEMPPEPFWEAHDTLELQLSSPPAR 1630 1640 1650 1660 1670 1680 mKIAA4 PVPAQG gi|747 DVAATLAVAVSFEAACPQRPSHLWKNKGLWVPEGQRARITVAALDASNLLASVPSPQRSE 1690 1700 1710 1720 1730 1740 >>gi|1617314|emb|CAA65529.1| melanoma-associated chondro (2322 aa) initn: 3863 init1: 3658 opt: 3667 Z-score: 4175.4 bits: 784.8 E(): 0 Smith-Waterman score: 3667; 82.063% identity (94.021% similar) in 669 aa overlap (2-669:995-1663) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTIS :::::::::::::::::::::::::::::: gi|161 LLRGRLVYQHDDSETTEDDIPFVATRQGESSGDMAWEEVRGVFRVAIQPVNDHAPVQTIS 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 RVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQE :.:::::::.:::::::::::::::::.::::::::::::::::::..:::::::::::: gi|161 RIFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYRFTQE 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 DLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQGT ::::..:::::::::.::.:::: ::::::::.::::::::::.:::.:::::::::::: gi|161 DLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGT 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 IDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNGS ::::::.::::::::::.::::::::::.::::.: :: .:.:::.::::::.::::::: gi|161 IDTAVLHLDTNLDIRSGDEVHYHVTAGPRWGQLVRAGQPATAFSQQDLLDGAVLYSHNGS 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 LSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLEV :::.::.:::: ::::::.. ::::::::::::::.::.::::::::::::::::::::. gi|161 LSPEDTMAFSVEAGPVHTDATLQVTIALEGPLAPLKLVRHKKIYVFQGEAAEIRRDQLEA 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHSR .:::: ::::.::..:::.::::::::.:: :.::::::::::::::::..::::::::: gi|161 AQEAVPPADIVFSVKSPPSAGYLVMVSRGALADEPPSLDPVQSFSQEAVDTGRVLYLHSR 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 PGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQITG : ::::.:::::::::: ::::. :::::::..:::..:::::::::. ::::::....: gi|161 PEAWSDAFSLDVASGLGAPLEGVLVELEVLPAAIPLEAQNFSVPEGGSLTLAPPLLRVSG 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 PYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDAF :::::: :: :::::::::: ::::: : .::.:::: ::::::::::::::: ::.: gi|161 PYFPTLLGLSLQVLEPPQHGPLQKEDGPQARTLSAFSWRMVEEQLIRYVHDGSETLTDSF 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 VLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDNDS ::.::::::::::.:::::.:.::::::::.::::::::.:::: .::: ::::.::.:: gi|161 VLMANASEMDRQSHPVAFTVTVLPVNDQPPILTTNTGLQMWEGATAPIPAEALRSTDGDS 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 GPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDGA : ::::::::::::::..:: :: :::. :::::::.:::::::::.:.::: : :::: gi|161 GSEDLVYTIEQPSNGRVVLRGAPGTEVRSFTQAQLDGGLVLFSHRGTLDGGFPFRLSDGE 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 HTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVVR ::::::::::.::::.::::.:.. ::::: ::::::::.: ::::.:.::. ::::::: gi|161 HTSPGHFFRVTAQKQVLLSLKGSQTLTVCPGSVQPLSSQTLRASSSAGTDPQLLLYRVVR 1570 1580 1590 1600 1610 1620 640 650 660 670 680 690 mKIAA4 GPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHHTDPNLTSGGCQLEHPPHWQLASLD :::::::.:::: :. :.::::::::: : ..: .: : gi|161 GPQLGRLFHAQQDSTGEALVNFTQAEVYAGNILYEHEMPPEPFWEAHDTLELQLSSPPAR 1630 1640 1650 1660 1670 1680 mKIAA4 PVPAQG gi|161 DVAATLAVAVSFEAACPQRPSHLWKNKGLWVPEGQRARITVAALDASNLLASVPSPQRSE 1690 1700 1710 1720 1730 1740 >>gi|114658239|ref|XP_001144835.1| PREDICTED: melanoma-a (2322 aa) initn: 3849 init1: 3643 opt: 3652 Z-score: 4158.3 bits: 781.6 E(): 0 Smith-Waterman score: 3652; 82.063% identity (94.021% similar) in 669 aa overlap (2-669:995-1663) 10 20 30 mKIAA4 GSGDMAWEEVRGVFRVAIQPVNDHAPVQTIS :::::::::::::::::::::::::::::: gi|114 LLRGRLVYQHDDSETTEDDIPFVATRQGESSGDMAWEEVRGVFRVAIQPVNDHAPVQTIS 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA4 RVFHVARGGQRLLTTDDVAFSDADSGFSDAQLVLTRKDLLFGSIVAMEEPTRPIYRFTQE :.:::::::.:::::::::::::::::.::::::::::::::::::..:::::::::::: gi|114 RIFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYRFTQE 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA4 DLRKKQVLFVHSGADHGWLQLQVPDGQHQATAMLEVQASEPYLHVANSSSLVVPQGGQGT :::...:::::::::.::.:::: ::::::::.::::::::::.:::.:::::::::::: gi|114 DLRNRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGT 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA4 IDTAVLQLDTNLDIRSGNEVHYHVTAGPQWGQLLRDGQSVTSFSQRDLLDGAILYSHNGS ::::::.::::::::::.::::::::::.:::::: :: .:.:::.::::::.::::::: gi|114 IDTAVLHLDTNLDIRSGDEVHYHVTAGPRWGQLLRAGQPATAFSQQDLLDGAVLYSHNGS 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA4 LSPQDTLAFSVAAGPVHTNTFLQVTIALEGPLAPLQLVQHKKIYVFQGEAAEIRRDQLEV :::.::::::: ::::::.. ::::::::::::::.::.::::::::::::::::::::. gi|114 LSPRDTLAFSVEAGPVHTDATLQVTIALEGPLAPLKLVRHKKIYVFQGEAAEIRRDQLEA 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA4 VQEAVLPADIMFSLRSPPNAGYLVMVSHGASAEEPPSLDPVQSFSQEAVNSGRVLYLHSR .:::: ::::.::..:::.::::::::.:: :.:::::::.::::::::. ::::::::: gi|114 AQEAVPPADIVFSVKSPPSAGYLVMVSRGALADEPPSLDPLQSFSQEAVDMGRVLYLHSR 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA4 PGAWSDSFSLDVASGLGDPLEGISVELEVLPTVIPLDVQNFSVPEGGTRTLAPPLVQITG : ::::.:::::::::: ::::. :::::::..:::..:::::::::. ::::::....: gi|114 PEAWSDAFSLDVASGLGAPLEGVLVELEVLPAAIPLETQNFSVPEGGSLTLAPPLLRVSG 1330 1340 1350 1360 1370 1380 400 410 420 430 440 450 mKIAA4 PYFPTLPGLVLQVLEPPQHGALQKEDHSQDGSLSTFSWREVEEQLIRYVHDGSETQTDAF :::::: :: :::::::::::::::: : .::.:::::::::::::::::::: ::.: gi|114 PYFPTLLGLSLQVLEPPQHGALQKEDGPQARTLSAFSWREVEEQLIRYVHDGSETLTDSF 1390 1400 1410 1420 1430 1440 460 470 480 490 500 510 mKIAA4 VLLANASEMDRQSQPVAFTITILPVNDQPPVLTTNTGLQIWEGAIVPIPPEALRGTDNDS ::.:.::.:::::.:::::.:.::::::::.::::::::.:::: .::: ::::.::.:: gi|114 VLMATASKMDRQSHPVAFTVTVLPVNDQPPILTTNTGLQMWEGATAPIPAEALRSTDGDS 1450 1460 1470 1480 1490 1500 520 530 540 550 560 570 mKIAA4 GPEDLVYTIEQPSNGRIALRVAPDTEVHRFTQAQLDSGLVLFSHRGALEGGFHFDLSDGA : ::::::::::::::..:: :: :::. :::::::. ::::::::.:.:::.: :::: gi|114 GSEDLVYTIEQPSNGRVVLRGAPGTEVRSFTQAQLDGRLVLFSHRGSLDGGFRFRLSDGE 1510 1520 1530 1540 1550 1560 580 590 600 610 620 630 mKIAA4 HTSPGHFFRVVAQKQALLSLEGTRKLTVCPESVQPLSSQSLSASSSTGADPRHLLYRVVR ::: ::::::.::::.::::::.: ::::: ::::::::.: ::::.:.::. ::::::: gi|114 HTSSGHFFRVTAQKQVLLSLEGSRTLTVCPGSVQPLSSQTLRASSSAGTDPQLLLYRVVR 1570 1580 1590 1600 1610 1620 640 650 660 670 680 690 mKIAA4 GPQLGRLLHAQQGSAEEVLVNFTQAEVRA-SLLSHHTDPNLTSGGCQLEHPPHWQLASLD :::::::.:::: :. :.::::::::: : ..: .: : gi|114 GPQLGRLFHAQQDSTGEALVNFTQAEVYAGNILYEHEMPPEPFWEAHDTLELQLSSPPAR 1630 1640 1650 1660 1670 1680 mKIAA4 PVPAQG gi|114 DVAATLAVAVSFEAACPQRPSHLWKNKGLWVPEGQRARITVAALDASNLLASVPSPQRSE 1690 1700 1710 1720 1730 1740 696 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Wed Mar 18 05:51:11 2009 done: Wed Mar 18 05:59:13 2009 Total Scan time: 1060.610 Total Display time: 0.460 Function used was FASTA [version 34.26.5 April 26, 2007]