# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj66157.fasta.nr -Q ../query/mKIAA1172.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1172, 1200 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7874605 sequences Expectation_n fit: rho(ln(x))= 7.4302+/-0.000236; mu= 5.9331+/- 0.013 mean_var=267.0863+/-50.254, 0's: 32 Z-trim: 157 B-trim: 0 in 0/67 Lambda= 0.078478 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148665971|gb|EDK98387.1| mCG129573, isoform CRA (1200) 8421 968.1 0 gi|31418605|gb|AAH53096.1| Sfrs15 protein [Mus mus (1183) 8318 956.4 0 gi|189163477|ref|NP_001032424.2| splicing factor, (1200) 6915 797.6 0 gi|34784233|gb|AAH57592.1| Splicing factor, argini (1209) 6046 699.2 3.8e-198 gi|6685965|sp|Q63627.1|SFR15_RAT RecName: Full=Spl (1048) 5972 690.7 1.2e-195 gi|149059801|gb|EDM10684.1| splicing factor, argin (1032) 5844 676.2 2.7e-191 gi|119630292|gb|EAX09887.1| splicing factor, argin (1071) 4944 574.3 1.3e-160 gi|52545884|emb|CAD38974.2| hypothetical protein [ (1125) 4944 574.4 1.3e-160 gi|109065525|ref|XP_001097429.1| PREDICTED: simila (1131) 4095 478.3 1.2e-131 gi|112180475|gb|AAH43353.1| Splicing factor, argin (1146) 3068 362.0 1.2e-96 gi|59803073|sp|O95104.3|SFR15_HUMAN RecName: Full= (1147) 3057 360.7 2.8e-96 gi|109065523|ref|XP_001097324.1| PREDICTED: simila (1153) 3044 359.3 7.7e-96 gi|194663883|ref|XP_614113.4| PREDICTED: similar t (1252) 3031 357.8 2.3e-95 gi|194226196|ref|XP_001498774.2| PREDICTED: splici (1149) 3020 356.6 5.1e-95 gi|119630291|gb|EAX09886.1| splicing factor, argin ( 838) 2977 351.5 1.2e-93 gi|4102967|gb|AAD09327.1| pre-mRNA splicing SR pro (1157) 2972 351.1 2.2e-93 gi|126325437|ref|XP_001376116.1| PREDICTED: simila (1506) 2948 348.6 1.7e-92 gi|119630289|gb|EAX09884.1| splicing factor, argin ( 853) 2755 326.4 4.6e-86 gi|7512570|pir||T17221 hypothetical protein DKFZp4 ( 667) 2751 325.8 5.4e-86 gi|224044147|ref|XP_002188657.1| PREDICTED: splici (1080) 2686 318.7 1.2e-83 gi|60098513|emb|CAH65087.1| hypothetical protein [ (1092) 2663 316.1 7.2e-83 gi|19353682|gb|AAH24860.1| Sfrs15 protein [Mus mus ( 382) 2554 303.1 2e-79 gi|148665970|gb|EDK98386.1| mCG129573, isoform CRA ( 836) 2237 267.7 2e-68 gi|149059800|gb|EDM10683.1| splicing factor, argin ( 464) 2122 254.3 1.2e-64 gi|90078092|dbj|BAE88726.1| unnamed protein produc ( 439) 2021 242.9 3.2e-61 gi|149570609|ref|XP_001519973.1| PREDICTED: simila ( 653) 1952 235.3 9.2e-59 gi|37361886|gb|AAQ91056.1| LRRGT00100 [Rattus norv ( 919) 1924 232.3 1e-57 gi|189524301|ref|XP_695887.3| PREDICTED: wu:fa96d0 (1070) 1706 207.7 3e-50 gi|149627591|ref|XP_001519287.1| PREDICTED: hypoth ( 542) 1637 199.5 4.5e-48 gi|47227091|emb|CAG00453.1| unnamed protein produc (1022) 1609 196.7 5.8e-47 gi|60552482|gb|AAH91642.1| Splicing factor, argini ( 482) 1414 174.2 1.7e-40 gi|149038498|gb|EDL92828.1| RNA binding motif prot (1091) 1295 161.2 3.1e-36 gi|1438530|gb|AAC52656.1| rA8 gi|20806133|ref| (1268) 1287 160.4 6.2e-36 gi|189531325|ref|XP_701075.3| PREDICTED: wu:fc50c0 (1248) 1267 158.1 3e-35 gi|194227552|ref|XP_001493696.2| PREDICTED: simila ( 846) 1264 157.6 3e-35 gi|73946160|ref|XP_533458.2| PREDICTED: similar to (1277) 1258 157.1 6.1e-35 gi|148669694|gb|EDL01641.1| mCG121289, isoform CRA (1258) 1249 156.1 1.2e-34 gi|54611444|gb|AAH38363.1| Rbm16 protein [Mus musc (1268) 1249 156.1 1.2e-34 gi|49523355|gb|AAH75621.1| Rbm16 protein [Mus musc (1268) 1249 156.1 1.2e-34 gi|47123322|gb|AAH70071.1| RBM16 protein [Homo sap (1271) 1247 155.9 1.4e-34 gi|30580495|sp|Q9UPN6.1|RBM16_HUMAN RecName: Full= (1271) 1247 155.9 1.4e-34 gi|168273166|dbj|BAG10422.1| RNA binding motif pro (1271) 1247 155.9 1.4e-34 gi|221044370|dbj|BAH13862.1| unnamed protein produ (1316) 1247 155.9 1.5e-34 gi|221044394|dbj|BAH13874.1| unnamed protein produ (1337) 1247 155.9 1.5e-34 gi|221040926|dbj|BAH12140.1| unnamed protein produ (1349) 1247 155.9 1.5e-34 gi|114609900|ref|XP_527544.2| PREDICTED: RNA-bindi (1370) 1247 155.9 1.5e-34 gi|148669693|gb|EDL01640.1| mCG121289, isoform CRA (1245) 1238 154.8 2.9e-34 gi|58402657|gb|AAH89292.1| MGC84961 protein [Xenop (1271) 1220 152.8 1.2e-33 gi|118088429|ref|XP_419686.2| PREDICTED: hypotheti (1362) 1217 152.5 1.6e-33 gi|224048041|ref|XP_002187166.1| PREDICTED: RNA bi (1543) 1211 151.9 2.7e-33 >>gi|148665971|gb|EDK98387.1| mCG129573, isoform CRA_b [ (1200 aa) initn: 4542 init1: 4542 opt: 8421 Z-score: 5166.9 bits: 968.1 E(): 0 Smith-Waterman score: 8421; 99.667% identity (99.750% similar) in 1201 aa overlap (1-1200:1-1200) 10 20 30 40 50 60 mKIAA1 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA1 ELAQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ELAQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAVM 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA1 AQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATA 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA1 APPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPACTQHQSMDQFQPRMMPIQ :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|148 APPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPAYTQHQSMDQFQPRMMPIQ 310 320 330 340 350 360 370 380 390 400 410 420 mKIAA1 QDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPGMAQPTMPQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPGMAQPTMPQPG 370 380 390 400 410 420 430 440 450 460 470 480 mKIAA1 MPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAPPVQPTFQSTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAPPVQPTFQSTF 430 440 450 460 470 480 490 500 510 520 530 540 mKIAA1 QPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRRSRHRR :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|148 QPQNEPHSQKPHQQ-EMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRRSRHRR 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 SRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDKRTTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDKRTTQ 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 QDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWAL 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 NKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKKPDNEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKKPDNEV 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 AQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFT 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA1 PPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPI 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA1 SIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPGPVIGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPGPVIGLQ 840 850 860 870 880 890 910 920 930 940 950 960 mKIAA1 APSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 APSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPH 900 910 920 930 940 950 970 980 990 1000 1010 mKIAA1 GMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDRDGRQQQPQQQPPPQQQQQQQQPQQ-P :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|148 GMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDRDGRQQQPQQQPPPQQQQQQQQPQQQP 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 mKIAA1 PQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFGRRSFGSRVENDRERYGSRNDDRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFGRRSFGSRVENDRERYGSRNDDRD 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 mKIAA1 NSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRDRDSRDRESRREKEENRKEKHEVAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRDRDSRDRESRREKEENRKEKHEVAD 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 mKIAA1 RAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKPEESPAEATSPVGPEKDPGSAAEPP ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|148 RAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKPEESPAEVTSPVGPEKDPGSAAEPP 1140 1150 1160 1170 1180 1190 1200 mKIAA1 R : gi|148 R 1200 >>gi|31418605|gb|AAH53096.1| Sfrs15 protein [Mus musculu (1183 aa) initn: 4439 init1: 4439 opt: 8318 Z-score: 5103.9 bits: 956.4 E(): 0 Smith-Waterman score: 8318; 99.662% identity (99.747% similar) in 1184 aa overlap (18-1200:1-1183) 10 20 30 40 50 60 mKIAA1 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV ::::::::::::::::::::::::::::::::::::::::::: gi|314 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV 10 20 30 40 70 80 90 100 110 120 mKIAA1 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 ELAQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 ELAQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAVM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 AQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 AQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 APPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPACTQHQSMDQFQPRMMPIQ :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|314 APPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPAYTQHQSMDQFQPRMMPIQ 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 QDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPGMAQPTMPQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 QDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPGMAQPTMPQPG 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA1 MPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAPPVQPTFQSTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 MPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAPPVQPTFQSTF 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA1 QPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRRSRHRR :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|314 QPQNEPHSQKPHQQ-EMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRRSRHRR 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA1 SRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDKRTTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 SRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDKRTTQ 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA1 QDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 QDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWAL 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA1 NKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKKPDNEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 NKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKKPDNEV 650 660 670 680 690 700 730 740 750 760 770 780 mKIAA1 AQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 AQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFT 710 720 730 740 750 760 790 800 810 820 830 840 mKIAA1 PPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 PPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPI 770 780 790 800 810 820 850 860 870 880 890 900 mKIAA1 SIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPGPVIGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 SIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPGPVIGLQ 830 840 850 860 870 880 910 920 930 940 950 960 mKIAA1 APSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 APSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPH 890 900 910 920 930 940 970 980 990 1000 1010 mKIAA1 GMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDRDGRQQQPQQQPPPQQQQQQQQPQQ-P :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|314 GMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDRDGRQQQPQQQPPPQQQQQQQQPQQQP 950 960 970 980 990 1000 1020 1030 1040 1050 1060 1070 mKIAA1 PQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFGRRSFGSRVENDRERYGSRNDDRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 PQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFGRRSFGSRVENDRERYGSRNDDRD 1010 1020 1030 1040 1050 1060 1080 1090 1100 1110 1120 1130 mKIAA1 NSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRDRDSRDRESRREKEENRKEKHEVAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 NSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRDRDSRDRESRREKEENRKEKHEVAD 1070 1080 1090 1100 1110 1120 1140 1150 1160 1170 1180 1190 mKIAA1 RAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKPEESPAEATSPVGPEKDPGSAAEPP ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|314 RAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKPEESPAEVTSPVGPEKDPGSAAEPP 1130 1140 1150 1160 1170 1180 1200 mKIAA1 R : gi|314 R >>gi|189163477|ref|NP_001032424.2| splicing factor, argi (1200 aa) initn: 3789 init1: 2947 opt: 6915 Z-score: 4245.4 bits: 797.6 E(): 0 Smith-Waterman score: 7821; 92.756% identity (96.003% similar) in 1201 aa overlap (18-1200:1-1200) 10 20 30 40 50 60 mKIAA1 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV ::::::::::::::::::::::::::::::::::::::::::: gi|189 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV 10 20 30 40 70 80 90 100 110 120 mKIAA1 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|189 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSENITATFQYLYLCP 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::.:: gi|189 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPGAENVTNNEGSPPPPVKVSS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 ELAQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAVM :: ::::::::.: ::::::::::: ::::::::::::::::::::::.::::::::::: gi|189 ELPQAPTNSMPAVPQLPSSDAFAAVDQLFQTTQGQQLQQILQTFQQPPKPQSPALDSAVM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 AQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATA :::::::::::::::::::::::::::::::::::::::::::::::::.:..:.::::: gi|189 AQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAVAVATTALATA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 APPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPACTQHQSMDQFQPRMMPIQ :::.:.::::::: :::. :::::::::.::::::::.:::: ::::..:::::::: .: gi|189 APPVPAAATPAVAPAVPASSATSPPPPQAPFGYPGDGMQQPAYTQHQNVDQFQPRMMALQ 290 300 310 320 330 340 370 380 390 400 410 mKIAA1 QDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPG-----LAQPGMAQPT ::.:.:::::::::::::::::::::::::::::::::::: ::: :.:::. :: gi|189 QDSMQHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMPQPGMPQPGLSQPGLPQPG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 MPQPGMPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAPPVQPT :::::::::::::::: ::::::::.::::::::.::::.:::::: :::. :.:::::: gi|189 MPQPGMPQPGMPQPGMPQPGLAQPGLAQPGMPQPGMPQPGMPQPGMPQPGMPPTPPVQPT 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA1 FQSTFQPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRR :: :::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|189 FQPTFQPQNEPHSQKPHQQ-EMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRR 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA1 SRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 SRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLD 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA1 KRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 KRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIK 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA1 IAWALNKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKK ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|189 IAWALNKGIKADFKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKK 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA1 PDNEVAQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQ :.::::::::::.:::::::::::::::::: .::::::::::::::::::::::::::: gi|189 PENEVAQNGGAEASHTEPVSPIPKPVPVPVPALPVPAPITVPPPQVPPHQPGPPVVGALQ 710 720 730 740 750 760 780 790 800 810 820 830 mKIAA1 PPAFTPPLGMPPPGFGPGVPPPPPPPP-FLRPGFNPMHLPPGFLPPGPPPPITPPVSIPP :::::::::.::::::::::::::::: : ::::::::::::::::::::::::::::: gi|189 PPAFTPPLGIPPPGFGPGVPPPPPPPPPFWGPGFNPMHLPPGFLPPGPPPPITPPVSIPP 770 780 790 800 810 820 840 850 860 870 880 890 mKIAA1 PHTPPISIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPG :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|189 PHTPPISIPNLVSGARGNAESADSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPG 830 840 850 860 870 880 900 910 920 930 940 950 mKIAA1 PVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGF ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|189 PVIGLQAPSTGLLGGRPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGF 890 900 910 920 930 940 960 970 980 990 1000 1010 mKIAA1 AMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDRDGRQQQPQQQPPPQQQQQQQ :::::::::::::::::::::::::::::::::::.:::::::::::::: ::::::: gi|189 AMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGSEDRDGRQQQPQQQQQQQQQQQQQ 950 960 970 980 990 1000 1020 1030 1040 1050 1060 mKIAA1 QPQQ----PPQQS-------PSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFGRRSFGSR : :: ::::: :::::::::::: :::::.::::::::::::::::::::: gi|189 QQQQQQQPPPQQSQTQQQPAPSQQPAPAQQQPQQFRNDNRQQFNSGRDQERFGRRSFGSR 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 mKIAA1 VENDRERYGSRNDDRDNSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRDRDSRDRES :::::::::::.:.::::::::::::::::.::::::::::::::::::::::::::::: gi|189 VENDRERYGSRSDERDNSNRERREWGRRSPERDRHRDLEERSRRSSGHRDRDRDSRDRES 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 mKIAA1 RREKEENR-KEKHEVADRAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKPEESPAEA ::::::.: ::::::::::::::::: ::::::. ::::::::::::::::::::::::: gi|189 RREKEESRGKEKHEVADRAGGNKAVEAPLSQVGNTDTVSELNKGEAMATVVKPEESPAEA 1130 1140 1150 1160 1170 1180 1190 1200 mKIAA1 TSPVGPEKDPGSAAEPPR :: : :::: ::::: :: gi|189 TSSVEPEKDSGSAAEAPR 1190 1200 >>gi|34784233|gb|AAH57592.1| Splicing factor, arginine/s (1209 aa) initn: 4896 init1: 3297 opt: 6046 Z-score: 3713.6 bits: 699.2 E(): 3.8e-198 Smith-Waterman score: 8242; 97.438% identity (97.603% similar) in 1210 aa overlap (18-1200:1-1209) 10 20 30 40 50 60 mKIAA1 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV ::::::::::::::::::::::::::::::::::::::::::: gi|347 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV 10 20 30 40 70 80 90 100 110 120 mKIAA1 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 ELAQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 ELAQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAVM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 AQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 AQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATA 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 APPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPACTQHQSMDQFQPRMMPIQ :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|347 APPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPAYTQHQSMDQFQPRMMPIQ 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 QDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPGMAQPTMPQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 QDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPGMAQPTMPQPG 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA1 MPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAPPVQPTFQSTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 MPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAPPVQPTFQSTF 410 420 430 440 450 460 490 500 510 520 530 mKIAA1 QPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPESRKSRSRS----PKRRRSRSGSRSRRS :::::::::::::: :::::::::::::::::::::::::: ::::::::::::::: gi|347 QPQNEPHSQKPHQQ-EMEVEQPCVTEVKRHVPESRKSRSRSASRSPKRRRSRSGSRSRRS 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA1 RHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 RHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDK 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA1 RTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 RTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKI 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA1 AWALNKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 AWALNKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKKP 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA1 DNEVAQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 DNEVAQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQP 710 720 730 740 750 760 780 790 800 810 820 830 mKIAA1 PAFTPPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 PAFTPPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPH 770 780 790 800 810 820 840 850 860 870 mKIAA1 TPPISIPN----------------------LVSGARGNAESGDSAKMYGSAGPPAAPTSL :::::::: .::::::::::::::::::::::::::::: gi|347 TPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSAKMYGSAGPPAAPTSL 830 840 850 860 870 880 880 890 900 910 920 930 mKIAA1 PTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 PTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMP 890 900 910 920 930 940 940 950 960 970 980 990 mKIAA1 PRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 PRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDR 950 960 970 980 990 1000 1000 1010 1020 1030 1040 1050 mKIAA1 DGRQQQPQQQPPPQQQQQQQQPQQ-PPQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQE :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|347 DGRQQQPQQQPPPQQQQQQQQPQQQPPQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQE 1010 1020 1030 1040 1050 1060 1060 1070 1080 1090 1100 1110 mKIAA1 RFGRRSFGSRVENDRERYGSRNDDRDNSNRERREWGRRSPDRDRHRDLEERSRRSSGHRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 RFGRRSFGSRVENDRERYGSRNDDRDNSNRERREWGRRSPDRDRHRDLEERSRRSSGHRD 1070 1080 1090 1100 1110 1120 1120 1130 1140 1150 1160 1170 mKIAA1 RDRDSRDRESRREKEENRKEKHEVADRAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 RDRDSRDRESRREKEENRKEKHEVADRAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVV 1130 1140 1150 1160 1170 1180 1180 1190 1200 mKIAA1 KPEESPAEATSPVGPEKDPGSAAEPPR ::::::::.:::::::::::::::::: gi|347 KPEESPAEVTSPVGPEKDPGSAAEPPR 1190 1200 >>gi|6685965|sp|Q63627.1|SFR15_RAT RecName: Full=Splicin (1048 aa) initn: 3076 init1: 2234 opt: 5972 Z-score: 3669.0 bits: 690.7 E(): 1.2e-195 Smith-Waterman score: 6848; 91.897% identity (95.520% similar) in 1049 aa overlap (170-1200:1-1048) 140 150 160 170 180 190 mKIAA1 FKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISSELAQAPTNSMPTVAQLPSS ::::::::.:::: ::::::::.: ::::: gi|668 GSPPPPVKVSSELPQAPTNSMPAVPQLPSS 10 20 30 200 210 220 230 240 250 mKIAA1 DAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAVMAQVQAITAQLKTAPTQPPE :::::: ::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|668 DAFAAVDQLFQTTQGQQLQQILQTFQQPPKPQSPALDSAVMAQVQAITAQLKTAPTQPPE 40 50 60 70 80 90 260 270 280 290 300 310 mKIAA1 QKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATAAPPAPTAATPAVATAVPVP ::::::::::::::::::::::::::::::.:..:.::::::::.:.::::::: :::. gi|668 QKTAFDKKLLDRFDYDDEPEAVEDSKKEDAVAVATTALATAAPPVPAAATPAVAPAVPAS 100 110 120 130 140 150 320 330 340 350 360 370 mKIAA1 SATSPPPPQTPFGYPGDGVQQPACTQHQSMDQFQPRMMPIQQDTMHHQVPLPPNGQMPGF :::::::::.::::::::.:::: ::::..:::::::: .:::.:.:::::::::::::: gi|668 SATSPPPPQAPFGYPGDGMQQPAYTQHQNVDQFQPRMMALQQDSMQHQVPLPPNGQMPGF 160 170 180 190 200 210 380 390 400 410 420 430 mKIAA1 GLLSAPPPFPPMPQPGMPQPGMAQPG-----LAQPGMAQPTMPQPGMPQPGMPQPGMAQP :::::::::::::::::::::: ::: :.:::. :: :::::::::::::::: :: gi|668 GLLSAPPPFPPMPQPGMPQPGMPQPGMPQPGLSQPGLPQPGMPQPGMPQPGMPQPGMPQP 220 230 240 250 260 270 440 450 460 470 480 490 mKIAA1 GLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAPPVQPTFQSTFQPQNEPHSQKPHQQ ::::::.::::::::.::::.:::::: :::. :.:::::::: :::::::::::::::: gi|668 GLAQPGLAQPGMPQPGMPQPGMPQPGMPQPGMPPTPPVQPTFQPTFQPQNEPHSQKPHQQ 280 290 300 310 320 330 500 510 520 530 540 550 mKIAA1 VEMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|668 -EMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPR 340 350 360 370 380 560 570 580 590 600 610 mKIAA1 SRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|668 SRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIE 390 400 410 420 430 440 620 630 640 650 660 670 mKIAA1 SINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDV :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|668 SINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADFKQYWDV 450 460 470 480 490 500 680 690 700 710 720 730 mKIAA1 ELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKKPDNEVAQNGGAETSHTEPV ::::::::::::::::::::::::::::::::::::::::::.::::::::::.:::::: gi|668 ELGVTYIPWDKVKAEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAEASHTEPV 510 520 530 540 550 560 740 750 760 770 780 790 mKIAA1 SPIPKPVPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGMPPPGFGPGV :::::::::::: .::::::::::::::::::::::::::::::::::::.::::::::: gi|668 SPIPKPVPVPVPALPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGV 570 580 590 600 610 620 800 810 820 830 840 850 mKIAA1 PPPPPPPP-FLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNA :::::::: : :::::::::::::::::::::::::::::::::::::::::::::::: gi|668 PPPPPPPPPFWGPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNA 630 640 650 660 670 680 860 870 880 890 900 910 mKIAA1 ESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGL ::.::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|668 ESADSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGGRPGL 690 700 710 720 730 740 920 930 940 950 960 970 mKIAA1 IPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|668 IPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFV 750 760 770 780 790 800 980 990 1000 1010 1020 mKIAA1 RPGGMPGLGGPGPGPGASEDRDGRQQQPQQQPPPQQQQQQQQPQQ----PPQQS------ ::::::::::::::::.:::::::::::::: :::::::: :: ::::: gi|668 RPGGMPGLGGPGPGPGGSEDRDGRQQQPQQQQQQQQQQQQQQQQQQQQPPPQQSQTQQQP 810 820 830 840 850 860 1030 1040 1050 1060 1070 1080 mKIAA1 -PSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFGRRSFGSRVENDRERYGSRNDDRDNSN :::::::::::: :::::.::::::::::::::::::::::::::::::::.:.::::: gi|668 APSQQPAPAQQQPQQFRNDNRQQFNSGRDQERFGRRSFGSRVENDRERYGSRSDERDNSN 870 880 890 900 910 920 1090 1100 1110 1120 1130 1140 mKIAA1 RERREWGRRSPDRDRHRDLEERSRRSSGHRDRDRDSRDRESRREKEENR-KEKHEVADRA :::::::::::.:::::::::::::::::::::::::::::::::::.: :::::::::: gi|668 RERREWGRRSPERDRHRDLEERSRRSSGHRDRDRDSRDRESRREKEESRGKEKHEVADRA 930 940 950 960 970 980 1150 1160 1170 1180 1190 1200 mKIAA1 GGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKPEESPAEATSPVGPEKDPGSAAEPPR ::::::: ::::::. ::::::::::::::::::::::::::: : :::: ::::: :: gi|668 GGNKAVEAPLSQVGNTDTVSELNKGEAMATVVKPEESPAEATSSVEPEKDSGSAAEAPR 990 1000 1010 1020 1030 1040 >>gi|149059801|gb|EDM10684.1| splicing factor, arginine/ (1032 aa) initn: 4652 init1: 2079 opt: 5844 Z-score: 3590.7 bits: 676.2 E(): 2.7e-191 Smith-Waterman score: 6720; 91.772% identity (95.257% similar) in 1033 aa overlap (190-1200:1-1032) 160 170 180 190 200 210 mKIAA1 PVAENVTNNEGSPPPPVKISSELAQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQ ::.: ::::::::::::::::::::::::: gi|149 MPAVPQLPSSDAFAAVAQLFQTTQGQQLQQ 10 20 30 220 230 240 250 260 270 mKIAA1 ILQTFQQPPQPQSPALDSAVMAQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPE :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ILQTFQQPPKPQSPALDSAVMAQVQAITAQLKTAPTQPPEQKTAFDKKLLDRFDYDDEPE 40 50 60 70 80 90 280 290 300 310 320 330 mKIAA1 AVEDSKKEDAAAISTAALATAAPPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQ ::::::::::.:..:.::::::::.:.::::::: :::. :::::::::.::::::::.: gi|149 AVEDSKKEDAVAVATTALATAAPPVPAAATPAVAPAVPASSATSPPPPQAPFGYPGDGMQ 100 110 120 130 140 150 340 350 360 370 380 390 mKIAA1 QPACTQHQSMDQFQPRMMPIQQDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQP ::: ::::..:::::::: .:::.:.:::::::::::::::::::::::::::::::::: gi|149 QPAYTQHQNVDQFQPRMMALQQDSMQHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQP 160 170 180 190 200 210 400 410 420 430 440 450 mKIAA1 GMAQPG-----LAQPGMAQPTMPQPGMPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQP :: ::: :.:::. :: :::::::::::::::: :::: :::. :::::::.:::: gi|149 GMPQPGMPQPGLSQPGLPQPGMPQPGMPQPGMPQPGMPQPGLPQPGLPQPGMPQPGMPQP 220 230 240 250 260 270 460 470 480 490 500 510 mKIAA1 AMPQPGMAQPGVSPAPPVQPTFQSTFQPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPES .:::::: :::. :.:::::::: :::::::::::::::: ::::::::::::::::::: gi|149 GMPQPGMPQPGMPPTPPVQPTFQPTFQPQNEPHSQKPHQQ-EMEVEQPCVTEVKRHVPES 280 290 300 310 320 520 530 540 550 560 570 mKIAA1 RKSRSRS----PKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERR ::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERR 330 340 350 360 370 380 580 590 600 610 620 630 mKIAA1 QKGLPQIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QKGLPQIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMV 390 400 410 420 430 440 640 650 660 670 680 690 mKIAA1 HRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKAEE :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|149 HRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADFKQYWDVELGVTYIPWDKVKAEE 450 460 470 480 490 500 700 710 720 730 740 750 mKIAA1 LESFCEGGMLDSDTLNPDWKGIPKKPDNEVAQNGGAETSHTEPVSPIPKPVPVPVPPIPV ::::::::::::::::::::::::::.::::::::::.:::::::::::::::::: .:: gi|149 LESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAEASHTEPVSPIPKPVPVPVPALPV 510 520 530 540 550 560 760 770 780 790 800 mKIAA1 PAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGMPPPGFGPGVPPPPPPPP-FLRPGFN ::::::::::::::::::::::::::::::::::.::::::::::::::::: ::::::: gi|149 PAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPPFLRPGFN 570 580 590 600 610 620 810 820 830 840 850 860 mKIAA1 PMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSAKMYGSAGPPA ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 PMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESADSAKMYGSAGPPA 630 640 650 660 670 680 870 880 890 900 910 920 mKIAA1 APTSLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 APTSLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQR 690 700 710 720 730 740 930 940 950 960 970 980 mKIAA1 FPMMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FPMMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPG 750 760 770 780 790 800 990 1000 1010 1020 1030 mKIAA1 ASEDRDGRQQQPQQQPPPQQQQQQQQPQQ----PPQQS-------PSQQPAPAQQQPPQF .:::::::::::::: :::::::: :: ::::: :::::::::::: :: gi|149 GSEDRDGRQQQPQQQQQQQQQQQQQQQQQQQQPPPQQSQTQQQPAPSQQPAPAQQQPQQF 810 820 830 840 850 860 1040 1050 1060 1070 1080 1090 mKIAA1 RNDSRQQFNSGRDQERFGRRSFGSRVENDRERYGSRNDDRDNSNRERREWGRRSPDRDRH :::.::::::::::::::::::::::::::::::::.:.::::::::::::::::.:::: gi|149 RNDNRQQFNSGRDQERFGRRSFGSRVENDRERYGSRSDERDNSNRERREWGRRSPERDRH 870 880 890 900 910 920 1100 1110 1120 1130 1140 1150 mKIAA1 RDLEERSRRSSGHRDRDRDSRDRESRREKEENR-KEKHEVADRAGGNKAVEPPLSQVGTI :::::::::::::::::::::::::::::::.: ::::::::::::::::: ::::::. gi|149 RDLEERSRRSSGHRDRDRDSRDRESRREKEESRGKEKHEVADRAGGNKAVEAPLSQVGNT 930 940 950 960 970 980 1160 1170 1180 1190 1200 mKIAA1 DTVSELNKGEAMATVVKPEESPAEATSPVGPEKDPGSAAEPPR ::::::::::::::::::::::::::: : :::: ::::: :: gi|149 DTVSELNKGEAMATVVKPEESPAEATSSVEPEKDSGSAAEAPR 990 1000 1010 1020 1030 >>gi|119630292|gb|EAX09887.1| splicing factor, arginine/ (1071 aa) initn: 5493 init1: 3552 opt: 4944 Z-score: 3039.8 bits: 574.3 E(): 1.3e-160 Smith-Waterman score: 6373; 79.319% identity (84.302% similar) in 1204 aa overlap (18-1200:1-1071) 10 20 30 40 50 60 mKIAA1 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV ::::::::::::::::::::::::::::::::::::::::::: gi|119 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV 10 20 30 40 70 80 90 100 110 120 mKIAA1 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP :::::::::: gi|119 VQIVEKFIKK-------------------------------------------------- 50 130 140 150 160 170 180 mKIAA1 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS :::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|119 ----SKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSS 60 70 80 90 100 190 200 210 220 230 mKIAA1 EL-AQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAV : .:: ::.:.: ::::::::::::::::::::::::::::::::::.:::::::.:: gi|119 EPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAV 110 120 130 140 150 160 240 250 260 270 280 290 mKIAA1 MAQVQAITAQLKTAPTQP---------PEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAA :::::::::::::.:::: :::::::::::::::::::::::::.:::::.. gi|119 MAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTT 170 180 190 200 210 220 300 310 320 330 340 350 mKIAA1 AISTAALATAAPPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPACTQHQSMD :..:.: :.:.::::::..::.:. :.:.::::::.:::.::::.:::: ::::.:: gi|119 AVTTTAPAAAVPPAPTATVPAAAA----PAAASPPPPQAPFGFPGDGMQQPAYTQHQNMD 230 240 250 260 270 280 360 370 380 390 400 410 mKIAA1 QFQPRMMPIQQDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPG ::::::: :::: ::::::::::::::::::: .:: :::: :: .: gi|119 QFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPP-FPPMAQPVIP------------- 290 300 310 320 330 420 430 440 450 460 470 mKIAA1 MAQPTMPQPGMPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAP :.: gi|119 ---------------------------------------------------------PTP 480 490 500 510 520 mKIAA1 PVQPTFQSTFQPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPESRKSRSRS----PKRRR ::: ::..:: :::: .:::::: ::::::::. :::::. ..::::::: ::::: gi|119 PVQQPFQASFQAQNEPLTQKPHQQ-EMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRR 340 350 360 370 380 390 530 540 550 560 570 580 mKIAA1 SRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCS ::::::::::::::::::::::::::::::::::::::::::::::::::.: ::::::: gi|119 SRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCS 400 410 420 430 440 450 590 600 610 620 630 640 mKIAA1 TTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGN 460 470 480 490 500 510 650 660 670 680 690 700 mKIAA1 YKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLN ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|119 YKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLN 520 530 540 550 560 570 710 720 730 740 750 760 mKIAA1 PDWKGIPKKPDNEVAQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQP ::::::::::.:::::::::::::::::::::::.::::::::::::::::::::::::: gi|119 PDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQP 580 590 600 610 620 630 770 780 790 800 810 820 mKIAA1 GPPVVGALQPPAFTPPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|119 GPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI 640 650 660 670 680 690 830 840 850 860 870 880 mKIAA1 TPPVSIPPPHTPPISIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLL ::::::::::::::::::::::::::::::::.:::::: ::::::.::::::::::::: gi|119 TPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLL 700 710 720 730 740 750 890 900 910 920 930 940 mKIAA1 GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRG :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|119 GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 760 770 780 790 800 810 950 960 970 980 990 1000 mKIAA1 PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDRDGRQQ---QPQQ :::::::::::::::::::::::::::::::::::::::::::. :::::::: :::: gi|119 PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQ 820 830 840 850 860 870 1010 1020 1030 1040 1050 1060 mKIAA1 QPPPQ--QQQQQQQPQQPPQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFGRRSFG :: :: :: :::: :::: ::::: :.:::: :::::.::::::::::::::::::: gi|119 QPQPQAPQQPQQQQQQQPP---PSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFG 880 890 900 910 920 930 1070 1080 1090 1100 1110 1120 mKIAA1 SRVENDRERYGSRNDDRDNSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRDRDSRDR .::::::::::.::::::::::.::::::::::::::::::::.:::::::::.:::::: gi|119 NRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDR 940 950 960 970 980 990 1130 1140 1150 1160 1170 mKIAA1 ESRREKEENR-KEKHEVADRAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKP-EESP :::::::: : ::: ::.:::::::.::::.::::..::.:::.:: . :.:.:: :: : gi|119 ESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELP 1000 1010 1020 1030 1040 1050 1180 1190 1200 mKIAA1 AEATSPVGPEKDPGSAAEPPR ::::: : :::: ::::: :: gi|119 AEATSSVEPEKDSGSAAEAPR 1060 1070 >>gi|52545884|emb|CAD38974.2| hypothetical protein [Homo (1125 aa) initn: 6191 init1: 3552 opt: 4944 Z-score: 3039.6 bits: 574.4 E(): 1.3e-160 Smith-Waterman score: 6868; 83.804% identity (88.787% similar) in 1204 aa overlap (18-1200:1-1125) 10 20 30 40 50 60 mKIAA1 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV ::::::::::::::::::::::::::::::::::::::::::: gi|525 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV 10 20 30 40 70 80 90 100 110 120 mKIAA1 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|525 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSS 110 120 130 140 150 160 190 200 210 220 230 mKIAA1 EL-AQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAV : .:: ::.:.: ::::::::::::::::::::::::::::::::::.:::::::.:: gi|525 EPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAV 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 MAQVQAITAQLKTAPTQP---------PEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAA :::::::::::::.:::: :::::::::::::::::::::::::.:::::.. gi|525 MAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTT 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 AISTAALATAAPPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPACTQHQSMD :..:.: :.:.::::::..::.:. :.:.::::::.:::.::::.:::: ::::.:: gi|525 AVTTTAPAAAVPPAPTATVPAAAA----PAAASPPPPQAPFGFPGDGMQQPAYTQHQNMD 290 300 310 320 330 360 370 380 390 400 410 mKIAA1 QFQPRMMPIQQDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPG ::::::: :::: ::::::::::::::::::: .:: :::: :: .: gi|525 QFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPP-FPPMAQPVIP------------- 340 350 360 370 380 420 430 440 450 460 470 mKIAA1 MAQPTMPQPGMPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAP :.: gi|525 ---------------------------------------------------------PTP 480 490 500 510 520 mKIAA1 PVQPTFQSTFQPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPESRKSRSRS----PKRRR ::: ::..:: :::: .:::::: ::::::::. :::::. ..::::::: ::::: gi|525 PVQQPFQASFQAQNEPLTQKPHQQ-EMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRR 390 400 410 420 430 440 530 540 550 560 570 580 mKIAA1 SRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCS ::::::::::::::::::::::::::::::::::::::::::::::::::.: ::::::: gi|525 SRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCS 450 460 470 480 490 500 590 600 610 620 630 640 mKIAA1 TTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 TTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGN 510 520 530 540 550 560 650 660 670 680 690 700 mKIAA1 YKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLN ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|525 YKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLN 570 580 590 600 610 620 710 720 730 740 750 760 mKIAA1 PDWKGIPKKPDNEVAQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQP ::::::::::.:::::::::::::::::::::::.::::::::::::::::::::::::: gi|525 PDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQP 630 640 650 660 670 680 770 780 790 800 810 820 mKIAA1 GPPVVGALQPPAFTPPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|525 GPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI 690 700 710 720 730 740 830 840 850 860 870 880 mKIAA1 TPPVSIPPPHTPPISIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLL ::::::::::::::::::::::::::::::::.:::::: ::::::.::::::::::::: gi|525 TPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLL 750 760 770 780 790 800 890 900 910 920 930 940 mKIAA1 GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRG :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|525 GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 810 820 830 840 850 860 950 960 970 980 990 1000 mKIAA1 PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDRDGRQQ---QPQQ :::::::::::::::::::::::::::::::::::::::::::. :::::::: :::: gi|525 PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQ 870 880 890 900 910 920 1010 1020 1030 1040 1050 1060 mKIAA1 QPPPQ--QQQQQQQPQQPPQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFGRRSFG :: :: :: :::: :::: ::::: :.:::: :::::.::::::::::::::::::: gi|525 QPQPQAPQQPQQQQQQQPP---PSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFG 930 940 950 960 970 980 1070 1080 1090 1100 1110 1120 mKIAA1 SRVENDRERYGSRNDDRDNSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRDRDSRDR .::::::::::.::::::::::.::::::::::::::::::::.:::::::::.:::::: gi|525 NRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDR 990 1000 1010 1020 1030 1040 1130 1140 1150 1160 1170 mKIAA1 ESRREKEENR-KEKHEVADRAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKP-EESP :::::::: : ::: ::.:::::::.::::.::::..::.:::.:: . :.:.:: :: : gi|525 ESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELP 1050 1060 1070 1080 1090 1100 1180 1190 1200 mKIAA1 AEATSPVGPEKDPGSAAEPPR ::::: : :::: ::::: :: gi|525 AEATSSVEPEKDSGSAAEAPR 1110 1120 >>gi|109065525|ref|XP_001097429.1| PREDICTED: similar to (1131 aa) initn: 6116 init1: 3515 opt: 4095 Z-score: 2520.1 bits: 478.3 E(): 1.2e-131 Smith-Waterman score: 6793; 82.630% identity (87.924% similar) in 1209 aa overlap (18-1200:1-1131) 10 20 30 40 50 60 mKIAA1 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV ::::::::::::::::::::::::::::::::::::::::::: gi|109 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV 10 20 30 40 70 80 90 100 110 120 mKIAA1 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::.:: gi|109 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAESVTNNEGSPPPPVKVSS 110 120 130 140 150 160 190 200 210 220 230 mKIAA1 EL-AQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAV : ::: ::.::: ::::::::::::::::::::::::::::::::::.:::::::.:: gi|109 EPPAQATPNSVPTVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAV 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 MAQVQAITAQLKTAPTQP---------PEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAA :::::::::::::.:::: :::::::::::::::::::::::::.:::::.. gi|109 MAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTT 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 AISTAALATAAPPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPACTQHQSMD :..:.. :.:.::::::..::.:. :.:.::::::.:::.::::.:::: ::. :: gi|109 AVATTVPAAAVPPAPTATVPAAAA----PAAASPPPPQAPFGFPGDGMQQPAYTQN--MD 290 300 310 320 330 360 370 380 390 400 410 mKIAA1 QFQPRMMPIQQDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPG ::::::: :::: ::::::::::::::::::: .:: :::: :: .: gi|109 QFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPP-FPPMAQPVIP------------- 340 350 360 370 380 420 430 440 450 460 470 mKIAA1 MAQPTMPQPGMPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAP :.: gi|109 ---------------------------------------------------------PTP 480 490 500 510 520 mKIAA1 PVQPTFQSTFQPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPESRKSRSRS----PKRRR ::: ::..:: :::: .:::::: ::::::::. .::::. ..::::::: ::::: gi|109 PVQQPFQASFQAQNEPLTQKPHQQ-EMEVEQPCIQDVKRHMSDNRKSRSRSASRSPKRRR 390 400 410 420 430 440 530 540 550 560 570 580 mKIAA1 SRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCS ::::::::::::::::::::::::::::::::::::::::::::::::::.: ::::::: gi|109 SRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCS 450 460 470 480 490 500 590 600 610 620 630 640 mKIAA1 TTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGN 510 520 530 540 550 560 650 660 670 680 690 700 mKIAA1 YKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLN ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|109 YKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLN 570 580 590 600 610 620 710 720 730 740 750 760 mKIAA1 PDWKGIPKKPDNEVAQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQP ::::::::::.:::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 PDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQP 630 640 650 660 670 680 770 780 790 800 810 820 mKIAA1 GPPVVGALQPPAFTPPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI ::::::.:::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|109 GPPVVGTLQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI 690 700 710 720 730 740 830 840 850 860 870 880 mKIAA1 TPPVSIPPPHTPPISIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLL ::::::::::::::::::::::::::::::::.:::::: ::::::.:::: : .: : . gi|109 TPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPKVLKPESQV 750 760 770 780 790 800 890 900 910 920 930 940 mKIAA1 GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRG :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|109 GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 810 820 830 840 850 860 950 960 970 980 990 1000 mKIAA1 PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGASEDRDGRQQQPQQQ-- :::::::::::::::::::::::::::::::::::::::::::. :::::::: :::: gi|109 PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQQQQ 870 880 890 900 910 920 1010 1020 1030 1040 1050 mKIAA1 --------PPPQQQQQQQQPQQPPQQSPSQQPAPAQQQPPQFRNDSRQQFNSGRDQERFG :: :::::::: :: : ::::: :.:::: :::::.:::::::::::::: gi|109 QQQQPQPQPPQQQQQQQQQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFG 930 940 950 960 970 980 1060 1070 1080 1090 1100 1110 mKIAA1 RRSFGSRVENDRERYGSRNDDRDNSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRDR :::::.::::::::::.::::::::::.::::::::::::::::::::.:::::::::.: gi|109 RRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRER 990 1000 1010 1020 1030 1040 1120 1130 1140 1150 1160 1170 mKIAA1 DSRDRESRREKEENR-KEKHEVADRAGGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKP ::::::::::::: : ::: ::.:::::::.::::.::::..::.:::.:::. :.:.:: gi|109 DSRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEKGESEAAVLKP 1050 1060 1070 1080 1090 1100 1180 1190 1200 mKIAA1 -EESPAEATSPVGPEKDPGSAAEPPR :: :::::: : :::: ::::: :: gi|109 SEELPAEATSSVEPEKDSGSAAEAPR 1110 1120 1130 >>gi|112180475|gb|AAH43353.1| Splicing factor, arginine/ (1146 aa) initn: 4919 init1: 2325 opt: 3068 Z-score: 1891.6 bits: 362.0 E(): 1.2e-96 Smith-Waterman score: 6804; 82.204% identity (87.184% similar) in 1225 aa overlap (18-1200:1-1146) 10 20 30 40 50 60 mKIAA1 VTGGPGAAAAAAATRANMDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV ::::::::::::::::::::::::::::::::::::::::::: gi|112 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHV 10 20 30 40 70 80 90 100 110 120 mKIAA1 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|112 SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSS 110 120 130 140 150 160 190 200 210 220 230 mKIAA1 EL-AQAPTNSMPTVAQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPQPQSPALDSAV : .:: ::.:.: ::::::::::::::::::::::::::::::::::.:::::::.:: gi|112 EPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAV 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 MAQVQAITAQLKTAPTQP---------PEQKTAFDKKLLDRFDYDDEPEAVEDSKKEDAA :::::::::::::.:::: :::::::::::::::::::::::::.:::::.. gi|112 MAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTT 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 AISTAALATAAPPAPTAATPAVATAVPVPSATSPPPPQTPFGYPGDGVQQPACTQHQSMD :..:.: :.:.::::::..::.:. :.:.::::::.:::.::::.:::: ::::.:: gi|112 AVTTTAPAAAVPPAPTATVPAAAA----PAAASPPPPQAPFGFPGDGMQQPAYTQHQNMD 290 300 310 320 330 360 370 380 390 400 410 mKIAA1 QFQPRMMPIQQDTMHHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQPG ::::::: :::: ::::::::::::::::::: .:: :::: :: .: gi|112 QFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPP-FPPMAQPVIP------------- 340 350 360 370 380 420 430 440 450 460 470 mKIAA1 MAQPTMPQPGMPQPGMPQPGMAQPGLAQPGMAQPGMPQPAMPQPAMPQPGMAQPGVSPAP :.: gi|112 ---------------------------------------------------------PTP 480 490 500 510 520 mKIAA1 PVQPTFQSTFQPQNEPHSQKPHQQVEMEVEQPCVTEVKRHVPESRKSRSRS----PKRRR ::: ::..:: :::: .:::::: ::::::::. :::::. ..::::::: ::::: gi|112 PVQQPFQASFQAQNEPLTQKPHQQ-EMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRR 390 400 410 420 430 440 530 540 550 560 570 580 mKIAA1 SRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCS ::::::::::::::::::::::::::::::::::::::::::::::::::.: ::::::: gi|112 SRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCS 450 460 470 480 490 500 590 600 610 620 630 640 mKIAA1 TTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 TTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGN 510 520 530 540 550 560 650 660 670 680 690 700 mKIAA1 YKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKAEELESFCEGGMLDSDTLN ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|112 YKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLN 570 580 590 600 610 620 710 720 730 740 750 760 mKIAA1 PDWKGIPKKPDNEVAQNGGAETSHTEPVSPIPKPVPVPVPPIPVPAPITVPPPQVPPHQP ::::::::::.:::::::::::::::::::::::.::::::::::::::::::::::::: gi|112 PDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQP 630 640 650 660 670 680 770 780 790 800 810 820 mKIAA1 GPPVVGALQPPAFTPPLGMPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|112 GPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI 690 700 710 720 730 740 830 840 850 860 mKIAA1 TPPVSIPPPHTPPISIPN----------------------LVSGARGNAESGDSAKMYGS :::::::::::::::::: .:::::::::::::.::::: gi|112 TPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGS 750 760 770 780 790 800 870 880 890 900 910 920 mKIAA1 AGPPAAPTSLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPP : ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 AVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPP 810 820 830 840 850 860 930 940 950 960 970 980 mKIAA1 PHLQRFPMMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGP :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 PHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGP 870 880 890 900 910 920 990 1000 1010 1020 1030 1040 mKIAA1 GPGPGASEDRDGRQQ---QPQQQPPPQQQQQ-QQQPQQPPQQSPSQQPAPAQQQPPQFRN :::::. :::::::: :::::: :: :: ::: :::: ::::: :.:::: :::: gi|112 GPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQPP---PSQQPPPTQQQPQQFRN 930 940 950 960 970 980 1050 1060 1070 1080 1090 1100 mKIAA1 DSRQQFNSGRDQERFGRRSFGSRVENDRERYGSRNDDRDNSNRERREWGRRSPDRDRHRD :.:::::::::::::::::::.::::::::::.::::::::::.:::::::::::::::: gi|112 DNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRD 990 1000 1010 1020 1030 1040 1110 1120 1130 1140 1150 mKIAA1 LEERSRRSSGHRDRDRDSRDRESRREKEENR-KEKHEVADRAGGNKAVEPPLSQVGTIDT ::::.:::::::::.:::::::::::::: : ::: ::.:::::::.::::.::::..:: gi|112 LEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDT 1050 1060 1070 1080 1090 1100 1160 1170 1180 1190 1200 mKIAA1 VSELNKGEAMATVVKP-EESPAEATSPVGPEKDPGSAAEPPR .:::.:: . :.:.:: :: :::::: : :::: ::::: :: gi|112 ASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSAAEAPR 1110 1120 1130 1140 1200 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 01:28:39 2009 done: Fri Mar 13 01:38:17 2009 Total Scan time: 1249.230 Total Display time: 0.790 Function used was FASTA [version 34.26.5 April 26, 2007]