# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj65371.fasta.nr -Q ../query/mKIAA0883.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0883, 389 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921112 sequences Expectation_n fit: rho(ln(x))= 5.0346+/-0.00018; mu= 11.5173+/- 0.010 mean_var=70.1648+/-13.664, 0's: 40 Z-trim: 43 B-trim: 0 in 0/66 Lambda= 0.153114 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148704039|gb|EDL35986.1| paraneoplastic antigen ( 388) 2580 578.8 7.1e-163 gi|37999667|sp|Q8BHK0.1|PNMA2_MOUSE RecName: Full= ( 365) 2430 545.6 6.3e-153 gi|148704040|gb|EDL35987.1| paraneoplastic antigen ( 364) 2399 538.8 7.3e-151 gi|149030339|gb|EDL85395.1| rCG52129 [Rattus norve ( 364) 2247 505.2 9.3e-141 gi|149746219|ref|XP_001494457.1| PREDICTED: simila ( 364) 1934 436.1 6.1e-120 gi|194041523|ref|XP_001925541.1| PREDICTED: simila ( 384) 1923 433.6 3.4e-119 gi|57105266|ref|XP_543234.1| PREDICTED: similar to ( 364) 1917 432.3 8.2e-119 gi|37999784|sp|Q9GMU3.1|PNMA2_MACFA RecName: Full= ( 364) 1913 431.4 1.5e-118 gi|37999812|sp|Q9UL42.2|PNMA2_HUMAN RecName: Full= ( 364) 1899 428.3 1.3e-117 gi|75040916|sp|Q5R486.1|PNMA2_PONAB RecName: Full= ( 364) 1893 427.0 3.2e-117 gi|54673708|gb|AAH36489.1| Paraneoplastic antigen ( 364) 1891 426.6 4.4e-117 gi|114619368|ref|XP_528094.2| PREDICTED: similar t ( 364) 1887 425.7 8.1e-117 gi|122136095|sp|Q2KIT6.1|PNMA2_BOVIN RecName: Full ( 364) 1875 423.0 5.1e-116 gi|6179738|gb|AAF05626.1|AF083115_1 paraneoplastic ( 283) 1536 348.1 1.5e-93 gi|160419157|sp|A6QLK5.1|PNMA1_BOVIN RecName: Full ( 353) 1032 236.8 5.7e-60 gi|194038524|ref|XP_001928996.1| PREDICTED: simila ( 353) 1026 235.5 1.4e-59 gi|73964283|ref|XP_547896.2| PREDICTED: similar to ( 584) 1026 235.6 2.1e-59 gi|37999352|sp|Q8VHZ4.1|PNMA1_RAT RecName: Full=Pa ( 353) 1023 234.8 2.2e-59 gi|37999715|sp|Q8ND90.2|PNMA1_HUMAN RecName: Full= ( 353) 1020 234.1 3.6e-59 gi|48146341|emb|CAG33393.1| PNMA1 [Homo sapiens] ( 353) 1020 234.1 3.6e-59 gi|14030861|gb|AAD13810.3| paraneoplastic neuronal ( 353) 1018 233.7 4.8e-59 gi|109084267|ref|XP_001091302.1| PREDICTED: parane ( 353) 1014 232.8 8.9e-59 gi|149737354|ref|XP_001490004.1| PREDICTED: simila ( 353) 1014 232.8 8.9e-59 gi|149760148|ref|XP_001496576.1| PREDICTED: simila ( 463) 1012 232.5 1.5e-58 gi|149027101|gb|EDL82843.1| rCG19951 [Rattus norve ( 465) 1010 232.0 2e-58 gi|37999678|sp|Q8C1C8.1|PNMA1_MOUSE RecName: Full= ( 353) 1007 231.3 2.6e-58 gi|12856730|dbj|BAB30762.1| unnamed protein produc ( 353) 1001 229.9 6.5e-58 gi|37999754|sp|Q95KI4.1|MOAP1_MACFA RecName: Full= ( 351) 995 228.6 1.6e-57 gi|114654506|ref|XP_510137.2| PREDICTED: modulator ( 351) 994 228.4 1.9e-57 gi|37999755|sp|Q96BY2.1|MOAP1_HUMAN RecName: Full= ( 351) 992 228.0 2.6e-57 gi|81914522|sp|Q8JZW8.1|PNMA3_MOUSE RecName: Full= ( 466) 992 228.1 3.2e-57 gi|109132677|ref|XP_001082427.1| PREDICTED: simila ( 448) 991 227.8 3.6e-57 gi|11139669|gb|AAG31786.1|AF305550_1 MAP-1 [Homo s ( 351) 986 226.6 6.5e-57 gi|4104636|gb|AAD02098.1| paraneoplastic neuronal ( 194) 963 221.4 1.4e-55 gi|90079087|dbj|BAE89223.1| unnamed protein produc ( 463) 962 221.4 3.2e-55 gi|160419235|sp|Q96PV4.2|PNMA5_HUMAN RecName: Full ( 448) 956 220.1 7.7e-55 gi|119593296|gb|EAW72890.1| paraneoplastic antigen ( 455) 952 219.2 1.4e-54 gi|114691178|ref|XP_001145495.1| PREDICTED: parane ( 455) 952 219.2 1.4e-54 gi|12053257|emb|CAB66812.1| hypothetical protein [ ( 455) 952 219.2 1.4e-54 gi|119593294|gb|EAW72888.1| paraneoplastic antigen ( 463) 952 219.2 1.5e-54 gi|189065387|dbj|BAG35226.1| unnamed protein produ ( 463) 952 219.2 1.5e-54 gi|114691176|ref|XP_001145572.1| PREDICTED: parane ( 463) 952 219.2 1.5e-54 gi|74725635|sp|Q9UL41.1|PNMA3_HUMAN RecName: Full= ( 463) 952 219.2 1.5e-54 gi|221045596|dbj|BAH14475.1| unnamed protein produ ( 448) 950 218.8 1.9e-54 gi|71680414|gb|AAI01113.1| Paraneoplastic antigen ( 448) 946 217.9 3.6e-54 gi|33286890|gb|AAH55374.1| Modulator of apoptosis ( 352) 929 214.0 4e-53 gi|37999782|sp|Q9ERH6.1|MOAP1_MOUSE RecName: Full= ( 352) 928 213.8 4.7e-53 gi|60552762|gb|AAH91310.1| Modulator of apoptosis ( 352) 921 212.3 1.4e-52 gi|109505170|ref|XP_001073080.1| PREDICTED: simila ( 345) 898 207.2 4.5e-51 gi|109506096|ref|XP_001067312.1| PREDICTED: simila ( 345) 898 207.2 4.5e-51 >>gi|148704039|gb|EDL35986.1| paraneoplastic antigen MA2 (388 aa) initn: 2419 init1: 2419 opt: 2580 Z-score: 3080.5 bits: 578.8 E(): 7.1e-163 Smith-Waterman score: 2580; 99.486% identity (99.486% similar) in 389 aa overlap (1-389:1-388) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE 310 320 330 340 350 360 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: : :::::::::::::::::::::::: gi|148 EE-ACFEQESREEPGEREGSGCWNNSRNN 370 380 >>gi|37999667|sp|Q8BHK0.1|PNMA2_MOUSE RecName: Full=Para (365 aa) initn: 2430 init1: 2430 opt: 2430 Z-score: 2901.8 bits: 545.6 E(): 6.3e-153 Smith-Waterman score: 2430; 100.000% identity (100.000% similar) in 365 aa overlap (25-389:1-365) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ :::::::::::::::::::::::::::::::::::: gi|379 MAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ 10 20 30 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE 280 290 300 310 320 330 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN ::::::::::::::::::::::::::::: gi|379 EEDAYFEQESREEPGEREGSGCWNNSRNN 340 350 360 >>gi|148704040|gb|EDL35987.1| paraneoplastic antigen MA2 (364 aa) initn: 2238 init1: 2238 opt: 2399 Z-score: 2864.8 bits: 538.8 E(): 7.3e-151 Smith-Waterman score: 2399; 99.452% identity (99.452% similar) in 365 aa overlap (25-389:1-364) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ :::::::::::::::::::::::::::::::::::: gi|148 MAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ 10 20 30 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE 280 290 300 310 320 330 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: : :::::::::::::::::::::::: gi|148 EE-ACFEQESREEPGEREGSGCWNNSRNN 340 350 360 >>gi|149030339|gb|EDL85395.1| rCG52129 [Rattus norvegicu (364 aa) initn: 2100 init1: 2100 opt: 2247 Z-score: 2683.3 bits: 505.2 E(): 9.3e-141 Smith-Waterman score: 2247; 92.329% identity (98.082% similar) in 365 aa overlap (25-389:1-364) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ :::::::::::::::::::::::. :::.::: :.: gi|149 MAVALLEEWCKIMGVDVQKSLLVIGIPVNCGELEVQ 10 20 30 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP :::::::::::::::::::.:::::::.::.::::::::::::::::::::::::::::: gi|149 TVLQEALKCVGSYRLLGKILQKQDNTSAVLLELMEDTDMSVVPSEVQGKGGVWKVIFKTP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP ::::::::::::::::::::::::::::::::::::: :::::::::::.::::::.::: gi|149 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATTPCTSPELLAHLVGQAMVHAQRP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD ::::.:::.:.:::::.::::::::::::::::::::::::::.::::::.::::::::: gi|149 LLPVRYCKLRVFSGSTVAAPEEEPFEVWLEQATEIAKEWPIPETEKKRWVTESLRGPALD 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::. :::::::::::: :::::::::::.:::::::::::::::::::: gi|149 LMHIVQADNPSISAEECLEAFKQVFGSMESRRTSQVKYLKTYQQEGEKISAYVLRLETLL 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE ::::::::::::::::::::::::::::.:::::::.:::::::::::::::::.::::: gi|149 RRAVEKRAIPRNIADQVRLEQVMAGANLSNVLWCRLRELKDQGPLPTFLQLMKVVREEEE 280 290 300 310 320 330 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: ::::.::::::::::::: :.::::: gi|149 EE-AYFEHESREEPGEREGSGRWDNSRNN 340 350 360 >>gi|149746219|ref|XP_001494457.1| PREDICTED: similar to (364 aa) initn: 2008 init1: 1869 opt: 1934 Z-score: 2309.7 bits: 436.1 E(): 6.1e-120 Smith-Waterman score: 1934; 78.082% identity (92.329% similar) in 365 aa overlap (25-389:1-364) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ ::.::::.::.::.:: ::::.:. ::::: : ::: gi|149 MALALLEDWCRIMSVDDQKSLMVMGIPVDCDEAEIQ 10 20 30 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP ::::.:: .: ::::::::.::.:...::.::::: :.::.::::::.::.:::::::: gi|149 EVLQETLKSLGRYRLLGKIFRKQENANAVLLELMEDIDVSVIPSEVQGRGGIWKVIFKTP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::.:::::::::::::.:::::: :::::::. ::.:::::::: :::..:. .: gi|149 NQDTEFLERLNLFLEKEGQTVSGMFRALGHEGVSPAAVPCVSPELLAHLLGQAIAHAPQP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::..: :.:.::::.. ::::::::.::::::::.::::. :::::::. ::::::::: gi|149 LLPMRYRKLRVFSGSAVPAPEEEPFEIWLEQATEIVKEWPVAEAEKKRWLMESLRGPALD 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::: :::::::::::: :::::::::::.:::.::::.::::::::::: gi|149 LMHIVQADNPSISVEECLEAFKQVFGSLESRRTSQVKYLKTYQEEGEKVSAYVLRLETLL 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE ::::::::::::::::::::::::::.:...:::::.::::::: :.::.:::::::::: gi|149 RRAVEKRAIPRNIADQVRLEQVMAGASLSEILWCRLRELKDQGPPPSFLELMKVIREEEE 280 290 300 310 320 330 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: : ::.:. ::: : .: : :.: .. gi|149 EE-ASFENENIEEPDEGDGYGHWDNEADD 340 350 360 >>gi|194041523|ref|XP_001925541.1| PREDICTED: similar to (384 aa) initn: 1993 init1: 1865 opt: 1923 Z-score: 2296.2 bits: 433.6 E(): 3.4e-119 Smith-Waterman score: 1923; 77.049% identity (92.350% similar) in 366 aa overlap (19-384:15-379) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ :. :::: ::::.::.::..: ::::.:. ::::: : ::: gi|194 MSEELCEIQQENESESISGTMARALLEDWCRIMSADDQKSLMVMGIPVDCDEAEIQ 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP ::::.:: .: ::::::::.::.:...::.:..::::.:..:.:.:::::.:::::::: gi|194 EVLQETLKSLGRYRLLGKIFRKQENANAVLLEFLEDTDVSMIPNEIQGKGGIWKVIFKTP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::.:::::::::::::.:::::: :::.:::. ::.:::::::: :::..:. .: gi|194 NQDTEFLERLNLFLEKEGQTVSGMFRALGHEGLSPAAVPCVSPELLAHLLGQAIAHAPQP 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::..: :.:.::::.. ::::::::.::::::::.::::. :::::::. ::::::::: gi|194 LLPMRYRKLRVFSGSAVPAPEEEPFEIWLEQATEIVKEWPVAEAEKKRWLMESLRGPALD 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::: :::::::::::: :::::::::::.:::.::::.::::::::::: gi|194 LMHIVQADNPSISVEECLEAFKQVFGSLESRRTSQVKYLKTYQEEGEKVSAYVLRLETLL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE ::::::::::::::::::::::::::.:...:::::.::::::: :.::.:::::::::: gi|194 RRAVEKRAIPRNIADQVRLEQVMAGASLSEILWCRLRELKDQGPPPSFLELMKVIREEEE 300 310 320 330 340 350 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: : ::.:. ::: : .: : :. gi|194 EE-AAFENENIEEPDEGDGYGHWDLEADE 360 370 380 >>gi|57105266|ref|XP_543234.1| PREDICTED: similar to par (364 aa) initn: 1985 init1: 1857 opt: 1917 Z-score: 2289.4 bits: 432.3 E(): 8.2e-119 Smith-Waterman score: 1917; 77.534% identity (92.329% similar) in 365 aa overlap (25-389:1-364) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ ::.::::.::.::.:: ::::.:. ::::: : ::: gi|571 MALALLEDWCRIMSVDEQKSLVVMGIPVDCDEAEIQ 10 20 30 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP ::::.:: .: ::::::::.::::...::.:::::.:.::.::::.::::.:::::::: gi|571 EVLQETLKSLGRYRLLGKIFRKQDNANAVLLELMEDVDVSVIPSEVRGKGGIWKVIFKTP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::.:::::::::::::.:::::: :::.:::: ::.:::::::: ::::.:. .: gi|571 NQDTEFLERLNLFLEKEGQTVSGMFRALGHEGMSPATVPCVSPELLAHLLGQAMAHAPQP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::..: :.:.::::.. ::::::::.::::::::.::::. :::::::. ::::::::: gi|571 LLPMRYRKLRVFSGSAVPAPEEEPFEIWLEQATEIVKEWPVAEAEKKRWLMESLRGPALD 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL ::::::::: .::: :::::::::::: :::::::::::.:::.::::.:::.::::::: gi|571 LMHIVQADNAAISVEECLEAFKQVFGSLESRRTSQVKYLKTYQEEGEKVSAYLLRLETLL 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE ::::::::::::::::::::::::::.:..::::::.::::::: :.::.:::.:::::: gi|571 RRAVEKRAIPRNIADQVRLEQVMAGASLSEVLWCRLRELKDQGPPPNFLELMKIIREEEE 280 290 300 310 320 330 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: : ::.:. ::: : .: : :.. .. gi|571 EE-ASFENENIEEPDEGDGYGHWDDEADD 340 350 360 >>gi|37999784|sp|Q9GMU3.1|PNMA2_MACFA RecName: Full=Para (364 aa) initn: 1979 init1: 1846 opt: 1913 Z-score: 2284.6 bits: 431.4 E(): 1.5e-118 Smith-Waterman score: 1913; 79.224% identity (92.798% similar) in 361 aa overlap (25-385:1-360) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ ::.::::.::.::.:: ::::.:. :::: : ::: gi|379 MALALLEDWCRIMSVDEQKSLMVTGIPVDYEEAEIQ 10 20 30 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP ::::.:: .::::::::::.::.:...::.::.::::.:..:::::::::::::.:::: gi|379 EVLQETLKSLGSYRLLGKIFRKQENANAVLLELLEDTDVSAIPSEVQGKGGVWKVVFKTP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::.:::::::::::::.:::::: :::.:::: :: :::::::: ::::.:. .: gi|379 NQDTEFLERLNLFLEKEGQTVSGMFRALGHEGMSPATVPCISPELLAHLLGQAMAHAPQP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::..: :.:.::::.. :::::::::::::::::.::::. :::::::.:::::::::: gi|379 LLPMRYRKLRVFSGSAVPAPEEEPFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALD 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::: :::::::::::: :::::.::.::.:::.::::.::::::::::: gi|379 LMHIVQADNPSISVEECLEAFKQVFGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLL 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE ::::::::::: ::::::::::::::.:...:::::.::::::: :.::.:::::::::: gi|379 RRAVEKRAIPRRIADQVRLEQVMAGATLNQMLWCRLRELKDQGPPPNFLELMKVIREEEE 280 290 300 310 320 330 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: : ::.:: ::: : .: : ::. gi|379 EE-ASFENESIEEPEEGDGYGGWNHEGDD 340 350 360 >>gi|37999812|sp|Q9UL42.2|PNMA2_HUMAN RecName: Full=Para (364 aa) initn: 1965 init1: 1823 opt: 1899 Z-score: 2267.9 bits: 428.3 E(): 1.3e-117 Smith-Waterman score: 1899; 78.947% identity (92.521% similar) in 361 aa overlap (25-385:1-360) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ ::.::::.::.::.:: ::::.:. ::.: : ::: gi|379 MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQ 10 20 30 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP ::::.:: .: ::::::::.::.:...::.::.::::.:..:::::::::::::::::: gi|379 EVLQETLKSLGRYRLLGKIFRKQENANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::.:::::::::::::.:::::: .::::::: :: :::::::: ::::.:. .: gi|379 NQDTEFLERLNLFLEKEGQTVSGMFRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::..: :.:.::::.. ::::: :::::::::::.::::. :::::::.:::::::::: gi|379 LLPMRYRKLRVFSGSAVPAPEEESFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALD 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::: :::::::::::: :::::.::.::.:::.::::.::::::::::: gi|379 LMHIVQADNPSISVEECLEAFKQVFGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLL 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE ::::::::::: ::::::::::::::.:...:::::.::::::: :.::.:::::::::: gi|379 RRAVEKRAIPRRIADQVRLEQVMAGATLNQMLWCRLRELKDQGPPPSFLELMKVIREEEE 280 290 300 310 320 330 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: : ::.:: ::: ::.: : ::. gi|379 EE-ASFENESIEEPEERDGYGRWNHEGDD 340 350 360 >>gi|75040916|sp|Q5R486.1|PNMA2_PONAB RecName: Full=Para (364 aa) initn: 1959 init1: 1827 opt: 1893 Z-score: 2260.7 bits: 427.0 E(): 3.2e-117 Smith-Waterman score: 1893; 78.670% identity (92.244% similar) in 361 aa overlap (25-385:1-360) 10 20 30 40 50 60 mKIAA0 RDRAFGPRGFETSWRPSPEAYPGTMAVALLEEWCKIMGVDVQKSLLVVDIPVDCGEPEIQ ::.::::.::.::.:: ::::.:. ::.: : ::: gi|750 MALALLEDWCRIMSVDEQKSLMVTGIPADYEEAEIQ 10 20 30 70 80 90 100 110 120 mKIAA0 TVLQEALKCVGSYRLLGKIFQKQDNTSVVLVELMEDTDMSVVPSEVQGKGGVWKVIFKTP ::::.:: .: ::::::::.::.:...::.::.::::.:..:::::::::::::::::: gi|750 EVLQETLKSLGRYRLLGKIFRKQENANAVLLELLEDTDISAIPSEVQGKGGVWKVIFKTP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NQDTEFLQRLNLFLEKEGQTVAGMFRALKHEGVSPATPPCTSPELLAHLTGQAMVHGQRP :::::::.:::::::::::::.:::::: ::::: :: :: :::::::: ::::.:. .: gi|750 NQDTEFLERLNLFLEKEGQTVSGMFRALGHEGVSSATVPCISPELLAHLLGQAMAHAPQP 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LLPVKYCKMRIFSGSTAAAPEEEPFEVWLEQATEIAKEWPIPEAEKKRWVAESLRGPALD :::..: :.:.::::.. :::::::::::::::::.::::. :::::::.:::::::::: gi|750 LLPMRYRKLRVFSGSAVPAPEEEPFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALD 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 LMHIVQADNPSISVGECLEAFKQVFGSTESRRTSQVKYLRTYQQEGEKISAYVLRLETLL :::::::::::::: :::::::::::: ::::..::.::.:::.::::.::::::::::: gi|750 LMHIVQADNPSISVEECLEAFKQVFGSLESRRAAQVRYLKTYQEEGEKVSAYVLRLETLL 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RRAVEKRAIPRNIADQVRLEQVMAGANLGNVLWCRLQELKDQGPLPTFLQLMKVIREEEE ::::::::::: ::::::::::::::.:...:::::.::::::: :.::.:::::::::: gi|750 RRAVEKRAIPRRIADQVRLEQVMAGATLNQMLWCRLRELKDQGPPPSFLELMKVIREEEE 280 290 300 310 320 330 370 380 mKIAA0 EEDAYFEQESREEPGEREGSGCWNNSRNN :: : ::.:: ::: : .: : ::. gi|750 EE-ASFENESIEEPEEGDGYGRWNHEGDD 340 350 360 389 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 22:39:43 2009 done: Mon Mar 16 22:46:04 2009 Total Scan time: 866.750 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]