Comparison of KIAA cDNA sequences between mouse and human (KIAA0547)
<<Original sequence data>>
mouse mKIAA0547 (mfj60347) length: 3056 bp, CDS: 3 - 2114
human KIAA0547 (hh00544) length: 5658 bp, CDS: 12 - 2102
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 4 - 14 3 8 72.7
CDS: 15 - 2114 1687 405 19.4
3'UTR: 2115 - 5684 540 383 41.5
amino acid
CDS: 15 - 2114 540 157 22.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
K C S I A E H L L
mfj60347 1 AGCGGGAGCTCGGTAAGTGTTCTGTGTGCAGTATTGCTGAGCACCTTCTG 50
| | | || | | ||| ||||| ||||||
hh00544 1 ...CACAACCGTGACAGACTGC.........CATTCCTGAGTCTCTTCTG 38
Q T A I P E S L L
51 ----+----*----+----*----+----*----+----*----+----* 100
V M G P R G R Q R R A G T V Q S T
mfj60347 51 GTCATGGGCCCGCGAGGCCGCCAGCGCCGGGCGGGAACGGTCCAGAGCAC 100
| ||||||||| || |||| |||| ||||| || |||| |||| |||
hh00544 39 GCCATGGGCCCCCGGAGCCGTGAGCGTCGGGCAGGCGCGGTACAGAACAC 88
A M G P R S R E R R A G A V Q N T
101 ----+----*----+----*----+----*----+----*----+----* 150
N D S S S L S K R S L A A H G Y V
mfj60347 101 CAACGACAGCAGCTCCCTCAGCAAACGATCGCTTGCCGCACACGGATACG 150
||||||||||||| |||||||||| || || || ||||| | ||| ||||
hh00544 89 CAACGACAGCAGCGCCCTCAGCAAGCGTTCCCTGGCCGCGCGCGGGTACG 138
N D S S A L S K R S L A A R G Y V
151 ----+----*----+----*----+----*----+----*----+----* 200
R D P F A A L L V P G P V R R T
mfj60347 151 TGCGCGACCCCTTTGCGGCGCTGCTGGTCCCGGGACCCGTGCGGCGCACG 200
||| ||||||||||| ||| ||||||| ||||| | | ||| ||| |
hh00544 139 TGCAGGACCCCTTTGCCGCGTTGCTGGTTCCGGGCGCGGCGCGCCGCGCA 188
Q D P F A A L L V P G A A R R A
201 ----+----*----+----*----+----*----+----*----+----* 250
P L I H R G Y Y V R A R A V R H C
mfj60347 201 CCGCTTATCCACCGCGGCTATTACGTGCGCGCGCGCGCCGTGCGTCACTG 250
||||| || ||||| ||||| ||||| ||||| ||||||||| | |||||
hh00544 189 CCGCTCATTCACCGAGGCTACTACGTCCGCGCACGCGCCGTGAGGCACTG 238
P L I H R G Y Y V R A R A V R H C
251 ----+----*----+----*----+----*----+----*----+----* 300
V R A F L E L T S A L P S R T R A
mfj60347 251 CGTGCGCGCCTTCCTCGAACTCACTAGCGCGCTCCCGTCCCGGACCAGAG 300
||||||||| || | || | | | |||||| || | || | | |
hh00544 239 CGTGCGCGCTTTTTTGGAGCAGATTGGCGCGCCCCAGGCCGCGCTTCGCG 288
V R A F L E Q I G A P Q A A L R A
301 ----+----*----+----*----+----*----+----*----+----* 350
Q I L S L G S G S D S L Y F R L
mfj60347 301 CCCAGATCCTGTCCTTGGGCTCAGGCTCCGACTCGCTTTATTTTCGTCTG 350
| |||||| |||| | ||| | |||| ||||||||| |||||||| |
hh00544 289 CGCAGATCTTGTCTCTCGGCGCTGGCTTCGACTCGCTCTATTTTCGCTTA 338
Q I L S L G A G F D S L Y F R L
351 ----+----*----+----*----+----*----+----*----+----* 400
K A A G L L A R A A V W E V D F P
mfj60347 351 AAAGCGGCGGGCCTCCTGGCCCGAGCTGCCGTCTGGGAGGTGGACTTCCC 400
||| | ||||||| ||||||||| ||||| |||||||||||||| || ||
hh00544 339 AAAACCGCGGGCCGCCTGGCCCGGGCTGCAGTCTGGGAGGTGGATTTTCC 388
K T A G R L A R A A V W E V D F P
401 ----+----*----+----*----+----*----+----*----+----* 450
D V S R L K A K R I E E T P E L R
mfj60347 401 GGACGTGTCTCGGCTCAAGGCGAAGAGGATCGAGGAGACCCCGGAGCTGC 450
||||||| | |||| ||| || | ||||| | ||||| || ||||||
hh00544 389 GGACGTGGCGCGGCGCAAAGCAGAAAGGATTGGAGAGACGCCAGAGCTGT 438
D V A R R K A E R I G E T P E L C
451 ----+----*----+----*----+----*----+----*----+----* 500
A Q T G P F K I G D S A S S L C
mfj60347 451 GTGCGCAGACCGGTCCTTTCAAGATCGGGGACTCGGCGTCATCTCTGTGC 500
| ||| ||||| |||||| ||| ||||| | ||||| | ||||||
hh00544 439 GCGCGTTAACCGGGCCTTTCGAGAGGGGGGAGCCCGCGTCCGCGCTGTGC 488
A L T G P F E R G E P A S A L C
501 ----+----*----+----*----+----*----+----*----+----* 550
F E S A D Y R I L G A D L R E L Q
mfj60347 501 TTCGAGAGCGCGGACTACCGCATCCTGGGCGCGGACCTGCGGGAGCTCCA 550
|| |||||||| |||||| |||||||||| |||| ||||| |||||||
hh00544 489 TTTGAGAGCGCAGACTACTGCATCCTGGGTCTGGACTTGCGGCAGCTCCA 538
F E S A D Y C I L G L D L R Q L Q
551 ----+----*----+----*----+----*----+----*----+----* 600
R L G E A L H G A G L D A T S P T
mfj60347 551 GCGATTAGGAGAGGCCCTGCATGGCGCCGGCCTGGACGCCACCTCTCCCA 600
|||| | | ||||||||| | ||| || || ||||| |||| ||||
hh00544 539 GCGAGTGGAGGAGGCCCTGGGCGCCGCGGGGCTCGACGCAGCCTCACCCA 588
R V E E A L G A A G L D A A S P T
601 ----+----*----+----*----+----*----+----*----+----* 650
L L L A E A V L T Y L E P S S A
mfj60347 601 CGCTGCTCCTGGCCGAGGCGGTGCTGACCTACCTGGAGCCCTCCAGTGCC 650
| |||||||||||||||||||||||||||||||| ||||| ||||||
hh00544 589 CTCTGCTCCTGGCCGAGGCGGTGCTGACCTACCTCGAGCCGGAGAGTGCC 638
L L L A E A V L T Y L E P E S A
651 ----+----*----+----*----+----*----+----*----+----* 700
T A L I A W A A Q R F P D A L F V
mfj60347 651 ACAGCCCTCATTGCCTGGGCCGCCCAGCGTTTCCCCGACGCCCTTTTCGT 700
| |||||||| |||||||| ||||||||||| || | |||||||||||
hh00544 639 GCGGCCCTCATCGCCTGGGCAGCCCAGCGTTTTCCTAATGCCCTTTTCGT 688
A A L I A W A A Q R F P N A L F V
701 ----+----*----+----*----+----*----+----*----+----* 750
I Y E Q M Q P G D A F G Q I M L Q
mfj60347 701 GATCTATGAGCAGATGCAGCCGGGGGATGCCTTTGGGCAGATCATGCTGC 750
| |||||||||||||| ||| || |||||||| ||| |||||||||
hh00544 689 GGTCTATGAGCAGATGAGGCCTCAAGACGCCTTTGGCCAGTTCATGCTGC 738
V Y E Q M R P Q D A F G Q F M L Q
751 ----+----*----+----*----+----*----+----*----+----* 800
H F Q R L H S P L H G L E L F P
mfj60347 751 AGCACTTTCAGCGGTTGCATTCACCCTTGCATGGCCTGGAGCTGTTTCCC 800
| || |||| || | | | || ||| ||||||||||||||| |||||
hh00544 739 AACATTTTCGGCAGCTAAACTCCCCCCTGCATGGCCTGGAGCGTTTTCCT 788
H F R Q L N S P L H G L E R F P
801 ----+----*----+----*----+----*----+----*----+----* 850
D V K A Q R Q R F L Q A G W T A C
mfj60347 801 GACGTGAAGGCCCAGCGCCAGCGCTTCCTTCAAGCTGGCTGGACTGCCTG 850
|||||| |||| ||||| | ||||||||||||||||||||||| |||||
hh00544 789 GACGTGGAGGCGCAGCGGCGCCGCTTCCTTCAAGCTGGCTGGACCGCCTG 838
D V E A Q R R R F L Q A G W T A C
851 ----+----*----+----*----+----*----+----*----+----* 900
S A L D L N E F Y R R L L S A E E
mfj60347 851 CAGCGCCCTGGACCTGAACGAGTTCTATCGCCGCCTTCTCTCGGCAGAAG 900
| | ||| ||||| | || || ||||||| | || |||| | |||||||
hh00544 839 CGGTGCCGTGGACATAAATGAATTCTATCACTGCTTTCTTCCCGCAGAAG 888
G A V D I N E F Y H C F L P A E E
901 ----+----*----+----*----+----*----+----*----+----* 950
R Q R V E T L E P F D E Y E E W
mfj60347 901 AGCGCCAGCGGGTTGAGACGCTTGAACCCTTTGATGAATATGAGGAGTGG 950
| |||| |||||| || | ||||||||||||| |||| ||||||||||
hh00544 889 AACGCCGGCGGGTGGAAAATATTGAACCCTTTGACGAATTTGAGGAGTGG 938
R R R V E N I E P F D E F E E W
951 ----+----*----+----*----+----*----+----*----+----* 1000
H L K C S H Y F I L A A S R G D I
mfj60347 951 CATCTGAAGTGTTCACACTATTTCATCCTGGCAGCATCTAGGGGAGACAT 1000
||||||||||| | || |||||||| |||||||| |||||||||||||
hh00544 939 CATCTGAAGTGCGCCCATTATTTCATTCTGGCAGCTTCTAGGGGAGACAC 988
H L K C A H Y F I L A A S R G D T
1001 ----+----*----+----*----+----*----+----*----+----* 1050
L S E T P V F E P S E A S F Q I D
mfj60347 1001 TCTGTCAGAAACTCCAGTGTTTGAGCCCTCAGAGGCTTCTTTTCAGATAG 1050
|| || | || | ||||||| |||||||||| | | || ||
hh00544 989 CCTCTCCCACACCCTAGTGTTTCCATCCTCAGAGGCATTTCCTCGCGTAA 1038
L S H T L V F P S S E A F P R V N
1051 ----+----*----+----*----+----*----+----*----+----* 1100
P A S P S G F L S A R V V T S D
mfj60347 1051 ATCCTGCCTCGCCTTCAGGGTTTCTTTCTGCCAGAGTAGTCACTAGTGAC 1100
||||||| |||||||||||| | | ||||||| ||||||| ||| ||
hh00544 1039 ATCCTGCTTCGCCTTCAGGGGTATTCCCTGCCAGCGTAGTCAGTAGCGAG 1088
P A S P S G V F P A S V V S S E
1101 ----+----*----+----*----+----*----+----*----+----* 1150
H Q H S S L K R Y G H A S A L L S
mfj60347 1101 CACCAGCACTCAAGCCTGAAGCGATATGGCCACGCCTCTGCCCTCTTGAG 1150
|||| | ||| ||||||| |||||||||||||||||| | |||||||
hh00544 1089 GGCCAGGTCCCAAACCTGAAGAGATATGGCCACGCCTCTGTCTTCTTGAG 1138
G Q V P N L K R Y G H A S V F L S
1151 ----+----*----+----*----+----*----+----*----+----* 1200
P G V I F S A G G F G E Q E G R H
mfj60347 1151 CCCTGGCGTTATTTTCAGTGCAGGAGGCTTTGGAGAACAAGAGGGACGAC 1200
||| | ||||||| ||||||||||||| |||||||| || ||||| || |
hh00544 1139 CCCAGACGTTATTCTCAGTGCAGGAGGATTTGGAGAGCAGGAGGGGCGGC 1188
P D V I L S A G G F G E Q E G R H
1201 ----+----*----+----*----+----*----+----*----+----* 1250
C R V S R F H V L S R S C D S E
mfj60347 1201 ACTGCCGAGTGAGCAGGTTTCACGTGCTCTCCAGATCCTGTGACTCGGAA 1250
|||||||||||||| ||||||| ||||||| ||| |||||||| |||
hh00544 1189 ACTGCCGAGTGAGCCAGTTTCACTTGCTCTCAAGAGATTGTGACTCTGAA 1238
C R V S Q F H L L S R D C D S E
1251 ----+----*----+----*----+----*----+----*----+----* 1300
W E G C Q I S T L G T E G Q W D G
mfj60347 1251 TGGGAAGGCTGCCAAATAAGTACCTTGGGGACTGAAGGCCAGTGGGATGG 1300
||| ||||| |||||||| | | | ||||||| || |||||||||||
hh00544 1239 TGGAAAGGCAGCCAAATAGGCAGTTGTGGGACTGGAGTTCAGTGGGATGG 1288
W K G S Q I G S C G T G V Q W D G
1301 ----+----*----+----*----+----*----+----*----+----* 1350
R L Y H T M T R L S D T R V L V L
mfj60347 1301 ACGCCTTTATCACACCATGACAAGGCTTTCTGATACTCGGGTTCTGGTTC 1350
|||||||||||||||||||||||| || || || | ||||||||||||||
hh00544 1289 ACGCCTTTATCACACCATGACAAGACTCTCAGAGAGTCGGGTTCTGGTTC 1338
R L Y H T M T R L S E S R V L V L
1351 ----+----*----+----*----+----*----+----*----+----* 1400
G G R L S P V S P A S G A L Q L
mfj60347 1351 TTGGAGGGAGACTCTCCCCAGTAAGTCCAGCCTCTGGGGCTCTCCAACTT 1400
| ||||||||||| ||||||||||||||||||| |||| |||||| |||
hh00544 1339 TGGGAGGGAGACTGTCCCCAGTAAGTCCAGCCTTGGGGGTTCTCCAGCTT 1388
G G R L S P V S P A L G V L Q L
1401 ----+----*----+----*----+----*----+----*----+----* 1450
D L Y K S K D N C S E G Q N V T V
mfj60347 1401 GATTTATACAAAAGTAAGGATAATTGCTCTGAGGGCCAAAATGTAACAGT 1450
|||| | || ||| |||||||| | |||||| || || || ||| |
hh00544 1389 CATTTTTTTAAGAGTGAGGATAATAACACTGAGGACCTGAAAGTGACAAT 1438
H F F K S E D N N T E D L K V T I
1451 ----+----*----+----*----+----*----+----*----+----* 1500
T K A A L E E G S V L S C W R H S
mfj60347 1451 AACGAAGGCTGCCTTGGAAGAAGGTTCAGTGTTGTCATGTTGGCGGCATT 1500
||| ||||||| | | || | ||| |||| |||||||||||||
hh00544 1439 AACAAAGGCTGGCCGAAAGGATGATTCCACTTTGTGTTGTTGGCGGCATT 1488
T K A G R K D D S T L C C W R H S
1501 ----+----*----+----*----+----*----+----*----+----* 1550
T T E V Y Y Q N Q R Y L F V Y G
mfj60347 1501 CAACAACGGAAGTATACTATCAGAATCAAAGATACTTATTTGTGTATGGT 1550
||||||| ||||| | || ||||||||| ||| || |||||||||||
hh00544 1489 CAACAACAGAAGTGTCCTGTCAGAATCAGGAATATTTGTTTGTGTATGGG 1538
T T E V S C Q N Q E Y L F V Y G
1551 ----+----*----+----*----+----*----+----*----+----* 1600
G R S V A E P V L S D C R F L H V
mfj60347 1551 GGCCGAAGTGTGGCTGAACCTGTACTAAGTGACTGTCGTTTTCTACATGT 1600
|| ||||| |||| |||||||||||||||||||| | ||| || |||||
hh00544 1539 GGTCGAAGCGTGGTGGAACCTGTACTAAGTGACTGGCATTTCCTCCATGT 1588
G R S V V E P V L S D W H F L H V
1601 ----+----*----+----*----+----*----+----*----+----* 1650
E T M A W V R I P V Q G A S P E G
mfj60347 1601 AGAGACAATGGCTTGGGTCAGAATCCCAGTACAAGGCGCATCACCCGAAG 1650
|| |||||||||||||||||| |||||||| | || | | ||| ||||
hh00544 1589 AGGGACAATGGCTTGGGTCAGGATCCCAGTGGAGGGAGAAGTACCTGAAG 1638
G T M A W V R I P V E G E V P E A
1651 ----+----*----+----*----+----*----+----*----+----* 1700
R H S H S A C S W Q G G A L I A
mfj60347 1651 GTCGGCATTCCCATAGCGCCTGCAGTTGGCAAGGGGGAGCACTTATCGCT 1700
|||||||| || || ||||||| ||||||||||||||| ||||| |||
hh00544 1639 CCCGGCATTCTCACAGTGCCTGCACTTGGCAAGGGGGAGCCCTTATTGCT 1688
R H S H S A C T W Q G G A L I A
1701 ----+----*----+----*----+----*----+----*----+----* 1750
G G L G A S E E P L S S V L F L K
mfj60347 1701 GGAGGTCTTGGGGCTTCTGAGGAACCGTTGAGCTCTGTACTCTTTCTCAA 1750
|||||||| |||||||||||||| || |||| |||||| |||||||| |
hh00544 1689 GGAGGTCTCGGGGCTTCTGAGGAGCCATTGAACTCTGTGCTCTTTCTGAG 1738
G G L G A S E E P L N S V L F L R
1751 ----+----*----+----*----+----*----+----*----+----* 1800
P V S S G F L W E S I D I Q P S I
mfj60347 1751 ACCAGTGTCCTCTGGATTCCTCTGGGAATCAATAGATATCCAGCCCTCCA 1800
|||| | || | ||||||||||||||| ||| |||| |||||||| |||
hh00544 1739 ACCAATCTCTTGTGGATTCCTCTGGGAGTCAGTAGACATCCAGCCTCCCA 1788
P I S C G F L W E S V D I Q P P I
1801 ----+----*----+----*----+----*----+----*----+----* 1850
T P R Y S H T A H V F N G K L L
mfj60347 1801 TTACCCCAAGGTACTCTCACACGGCTCATGTGTTTAATGGAAAGCTGCTT 1850
|||||||||||||||| ||||| ||||||||| | |||||||||||| |
hh00544 1789 TTACCCCAAGGTACTCCCACACAGCTCATGTGCTCAATGGAAAGCTGTTA 1838
T P R Y S H T A H V L N G K L L
1851 ----+----*----+----*----+----*----+----*----+----* 1900
L V G G V W I H S S S V P G V T V
mfj60347 1851 CTGGTTGGAGGGGTCTGGATTCATTCCTCCTCAGTTCCTGGAGTGACTGT 1900
|||||||||||| |||||||||||||||||||| ||||||||||||||||
hh00544 1839 CTGGTTGGAGGGATCTGGATTCATTCCTCCTCATTTCCTGGAGTGACTGT 1888
L V G G I W I H S S S F P G V T V
1901 ----+----*----+----*----+----*----+----*----+----* 1950
I C L T T G L S S E Y Q I D T A S
mfj60347 1901 TATCTGTTTGACTACAGGGTTGAGCTCTGAATATCAGATTGACACAGCGT 1950
||| |||||||||||| ||||||||||| ||||||||||||||| | |
hh00544 1889 GATCAATTTGACTACAGGATTGAGCTCTGAGTATCAGATTGACACAACAT 1938
I N L T T G L S S E Y Q I D T T Y
1951 ----+----*----+----*----+----*----+----*----+----* 2000
V P W P L M L H N H S S A L L P
mfj60347 1951 CTGTGCCATGGCCATTAATGCTGCACAACCACAGCAGCGCCCTCCTTCCT 2000
||||||||||||||||||| | |||||||| | || ||| ||||||
hh00544 1939 ATGTGCCATGGCCATTAATGTTACACAACCATACTAGTATCCTTCTTCCT 1988
V P W P L M L H N H T S I L L P
2001 ----+----*----+----*----+----*----+----*----+----* 2050
E E Q Q L L L I G G G G N C F S F
mfj60347 2001 GAAGAGCAGCAGCTCCTGCTTATTGGAGGTGGAGGGAACTGCTTTTCCTT 2050
|||||||| ||||||||||| |||||||||| |||||||||||||||||
hh00544 1989 GAAGAGCAACAGCTCCTGCTCCTTGGAGGTGGTGGGAACTGCTTTTCCTT 2038
E E Q Q L L L L G G G G N C F S F
2051 ----+----*----+----*----+----*----+----*----+----* 2100
G T Y F N P H T V A L D L S S L C
mfj60347 2051 TGGTACTTATTTCAACCCCCACACAGTGGCATTAGACCTTTCTTCCTTAT 2100
|||||| || ||||||||||| ||||| ||||||||||||||||||||
hh00544 2039 TGGTACCTACTTCAACCCCCATACAGTCACATTAGACCTTTCTTCCTTAA 2088
G T Y F N P H T V T L D L S S L S
2101 ----+----*----+----*----+----*----+----*----+----* 2150
S G Q *
mfj60347 2101 GTTCAGGGCAATAAAGAATGGACTTGATATATTTAGGACCTA........ 2142
|| | ||||| ||| || |||||| ||||| |||||| |
hh00544 2089 GTGCTGGGCAGTAAGGACTGGACT...AATATTCAGGACCCACTAAAGTA 2135
A G Q *
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj60347 2143 ......................AGGGTGAATTTGTTG.......TATTGC 2163
||| ||| | | | || |||
hh00544 2136 GACAATAAAGTTTTCCACAAATAGGATGACCCTCTAGCTATAGATACTGC 2185
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj60347 2164 CACACTCCCAACACACACACCTTTCTT.CCTTACCACACCATTGAGCAGA 2212
||| | || | || | ||| || ||||| ||| | ||| |
hh00544 2186 CACTCCTCCTTTCCCCATCCTTTTTTTCCCTTAGCACTATTCAGTGCAAA 2235
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj60347 2213 GACCATAAAA.......ATGATGATTAAAATACAGACCAGCAGTAAGTAT 2255
| |||| | || |||||||| | | || | | ||
hh00544 2236 AAGTGAAAAAGGTTGGTAAAATAGGTAAAATACCTAGAAACAATCACTAC 2285
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj60347 2256 AAAAATAAAGCATCAAAAGAGTGGCATGCATCCTAGGGGCCTCAGCATCA 2305
| ||| | ||| | | | |||||| | | | ||
hh00544 2286 AGAAA.ACAGCTGAAGACAGTGGCCATGCAGTCCGAGAGGAGTAGTGGTC 2334
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj60347 2306 TGTGAAGAGTTTTCTGGGGTTCTATCAGTTTTCCAGTCTCAGCTCTAACA 2355
|| | |||||| | || || | ||| ||| |
hh00544 2335 TGCCTCTAATTTTCTAATCTAAGTTCGTTTATTGAGTTACAGTGGTCTTT 2384
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj60347 2356 AG.GAACCAGCACAACTCCTAGGTCTGAGGACCTATTATTTATTGAGTCA 2404
|| || | |||| | | || ||| | | | ||||
hh00544 2385 AGTAAAGTAAAACAATTTCCCAATCCCAGGCCTTGTGATTT......... 2425
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj60347 2405 CAACAACCTTTAGCCTAAGTAAAAAAAACAAAAACGAAAAACATTCCCAA 2454
| || | | ||||| | ||| | | |
hh00544 2426 ........GAGATGGTACCTTAGAAAAAGTTACACGCAGTTCCGT..... 2462
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj60347 2455 ACCTGGGTCTGTGACCTAGATTATATTTTGGAAAAAGTTTCACACAGGTC 2504
| | | |||| || || ||||||||||||| |||
hh00544 2463 ..GGTTGAATATATTTGAGATGGTACCTTAGAAAAAGTTTCACGCAG... 2507
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj60347 2505 ATGGTAAAAATCCACAGCTGAGTATAGTTCA.GGAATGTAGTGTTGACCT 2553
|||| | ||| ||||||| | ||| ||||| |||||
hh00544 2508 .........ATCCTTGGTTGAATATAGTTGAGGGAGCGTAGTATTGACAA 2548
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj60347 2554 GTTGGCTGTGGGCAAACAGTCTAAAATGAACACTG.......CAGTTTAA 2596
| | | |||| || |||||||||| | | ||||
hh00544 2549 TTCTTCATGTAGGAAAC...CTGAAATGAACACAGTCACAGTTTGATTAA 2595
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj60347 2597 AGACTCGTGCTTTTAGTTTGAACACTGAACTTTAACAGTGAGAAAAAGTA 2646
| | || || || ||| |||| |||| | ||| || ||
hh00544 2596 AACATTGTCCTGTTTGTTGCAACAGAAAACTCGGATAGTTTTAACAACAG 2645
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj60347 2647 CAA................CTTAGATATTATGCTTTTGATCACTTTTTTG 2680
|| ||| | || ||||| | | | |||||
hh00544 2646 GAAACACTTGTAGGACTTCCTTTACCAACATACTTTT..TAAATGTTTTG 2693
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj60347 2681 CTAAT.GTTTTATATTTATCTAGCTTTATAAGTGCTAATAAACCAGACAT 2729
||| | ||| |||||||| ||| |||||||||| |||||| || || |
hh00544 2694 CTATTGGTTCCATATTTATTTAGATTTATAAGTGTCAATAAAGCAAACTT 2743
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj60347 2730 TTAATGCCTTAATTTTGTACCTTCTATAATGAATAATGTTT......... 2770
|| |||||| |||| | | ||||||||||
hh00544 2744 TTGATGCCTCAATTCATTTTGCACGGGGTATAATAATGTTTTGTTCCAGA 2793
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj60347 2771 GTTCCTGTCAGCCGGACACTGTTCTAAACCCCCAAGCAGCT....TAGAT 2816
| || || || ||||||||| | ||||| ||| | ||
hh00544 2794 TATACTCTCCACCTTTCACTGTTCT.GTGCTCCAAGAGGCTGACCTTTAT 2842
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj60347 2817 AGGCAGCATCA...........................GTCCACAAGTCA 2839
||| |||||| ||||| |||||
hh00544 2843 GGGCTGCATCAAGGAGCTCTCTTTACTTTTTGGTTGAGTTCCACCAGTCA 2892
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj60347 2840 G................................................. 2840
|
hh00544 2893 GAGGCACCAGAGGGGAATGGGGGCAAAAAGAAGAGTGAGAGTGAGTTGGT 2942
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj60347 2841 .................................................. 2841
hh00544 2943 ATTTATTCCCAATTCTTCCCCTGTTGGTTTGCAAGTTGGCAGTGGCAGCA 2992
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj60347 2841 .................................................. 2841
hh00544 2993 TTCTTCTGTCAAAGGCTACAGCTCCTGCCGTGTAATCCTTTCCTGAAGAC 3042
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj60347 2841 .................................................. 2841
hh00544 3043 AGAGTTCTAATTCTGCATCATCCCAGGTTTCAGTAATTGTTCCTTTACTT 3092
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj60347 2841 .................................................. 2841
hh00544 3093 CACCTTTTCAGGCCTAGGAGTTGTGATGGCTCTTTGCTAGACCTGAACTG 3142
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj60347 2841 .................................................. 2841
hh00544 3143 TACTGTCCAATGTGGTAGCTATTGACAACATGTGACTATTTAAACGAATT 3192
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj60347 2841 .................................................. 2841
hh00544 3193 AATAAATTCAGTGGCTTAGTCACATTGACCACATTTTAAGTGCTTAATAA 3242
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj60347 2841 .................................................. 2841
hh00544 3243 CTATGTGTGGCTTTGGCTACTGTATTAGACAATGTAGATGTAGAACATTT 3292
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj60347 2841 .............ATAAGTACTGTACTATGCTAA................ 2861
|| ||||| || |||| |
hh00544 3293 CATCGTTACAGAAATTTCTACTGGACACTGCTGACTGGATATCTTGACTT 3342
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj60347 2862 .................................................. 2862
hh00544 3343 GGTTTCCCTTAACCCTACTCAGCCCCTTATAGTTAGCATCCCATTAAACT 3392
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj60347 2862 .................................................. 2862
hh00544 3393 CAATTATCCCTTTTAAATGGGAATCTGTTGCCTAGTGAGCCATGTGAGAT 3442
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj60347 2862 .................................................. 2862
hh00544 3443 CAATGAAATAGCTATTCATCCTTAAAATTTGAGCCTTAATTTGTCATCTA 3492
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj60347 2862 .................................................. 2862
hh00544 3493 AATTATGCATACCTTGTGAAATATACACCTCAAAAAATGTAGTGGCTTTG 3542
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj60347 2862 .................................................. 2862
hh00544 3543 GTGGTAATAAGTGTATTACTTTAGTATTTCTTCTTAGTCCTAGAAACCTT 3592
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj60347 2862 .................................................. 2862
hh00544 3593 AGTAGTTTTCATTCTACAAGTGCCTAAATGATTATTATGAACCATCATTG 3642
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj60347 2862 .................................................. 2862
hh00544 3643 ATGACAAATTGCATCCTTTATTTCTATTAATTTTGCATATAAATGGATGT 3692
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj60347 2862 .................................................. 2862
hh00544 3693 GAAAGGTGATTAATATAAAAACCAAGTAGCAAACACAAACCTAAGTGTAT 3742
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj60347 2862 .................................................. 2862
hh00544 3743 GGAGAGGACAGTCTTGGCTCTGTTAGATGAAGCCTCCCCGGGGGAGACCA 3792
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj60347 2862 .................................................. 2862
hh00544 3793 GCTGAATGAGGGTTGTGGTATAGGCTGGGCATGGTGGCTCACGCCTATAA 3842
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj60347 2862 .................................................. 2862
hh00544 3843 TTCCAGCACTTTGGGAGGCCAAGACAGAAGGATCACTTAAAGCCAGGAGT 3892
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj60347 2862 ................................ACTATACTATATACAAGT 2879
| ||| | | || |
hh00544 3893 TTAAGACCAGCCCAGGCAACAAAGTCAGATCCCCATCTCTACAAAAAAAT 3942
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj60347 2880 ACTATAAGAAGGGGATGTGTGTTGG.......................GG 2906
| | || | |||||| | | |
hh00544 3943 AAGTAGGCACGGTGGTGTGTGCTTGTAGTCTTGGATACTCTGGAGGCTGA 3992
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj60347 2907 GGGGCTGGGGAGCAGGAAGTGAGCCACAGTAGTTGTGC............ 2944
|| | | | |||| | | || ||||| | | | |||
hh00544 3993 GGTGATAGTGAGCTGTGATTGTGCCACTGCACTCCTGCCTGGTTGACAGA 4042
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj60347 2945 .................................................. 2945
hh00544 4043 GTGAGACCCCGTCTCTTAAAAAGAAAAAAAAAAAAGGTTGTTGTCCAACT 4092
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj60347 2945 .................................................. 2945
hh00544 4093 TCAGCTTTCCTGAGACTTTGTAAGAGCCATTTCTAGGGAAAGCATTGGTT 4142
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj60347 2945 .................................................. 2945
hh00544 4143 ATGGCTATGACTGAGTCCTGGGAAACAGGGCTTATTACAGCTGGGAAGAC 4192
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj60347 2945 .................................................. 2945
hh00544 4193 ATCTGGCAAGGCGATCAGTGGGCCAGGTAGTAGAAAACTGGCAGGGAATA 4242
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj60347 2945 .................................................. 2945
hh00544 4243 TGATCAGCAGGAGAAAATGGCTGTTCTGTATTTCCTGTTTCTAAGTTTAC 4292
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj60347 2945 .................................................. 2945
hh00544 4293 TACAGCACACCCCAGCTTTCAGGAGCAGATAAAAGCAGAACACTGTGATG 4342
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj60347 2945 .................................................. 2945
hh00544 4343 AGGCCAGGCGCAGTGGCACATGCCTTGATCCCAGCACTTTGGGAGGCCAA 4392
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj60347 2945 .................................................. 2945
hh00544 4393 GGCTGGCAGATCACTTGAACTCAGGAGTTGGAGACCAGCCTGGCCAATAT 4442
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj60347 2945 .................................................. 2945
hh00544 4443 GGTGAAACTCCGTCTCTACCCAAAAAAAAAAAAAAAAGGAAGTTAATGAA 4492
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj60347 2945 .................................................. 2945
hh00544 4493 AAATATCATCAAACAAAAGGGTAAACAAGTCTTAGTGAAAAAGGGCAAAC 4542
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj60347 2945 .................................................. 2945
hh00544 4543 TATTGGTGCAATAATATACCCTTTAAAGACATCATCATTTCAAATAGGGC 4592
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj60347 2945 .................................................. 2945
hh00544 4593 TGTACAAATATAGAAAGATGTAGGATGAATTCAAAACCTATGACTAAATA 4642
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mfj60347 2945 .................................................. 2945
hh00544 4643 ATTTAAACCAAACGCAATAATGATGAGAAAGAAAGAAGATCCATGTTCAA 4692
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mfj60347 2945 .................................................. 2945
hh00544 4693 TTGGGGATTTATAGTTTCTTTATAAAGATGAAGTACAGTGACTCTAGTGT 4742
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mfj60347 2945 .................................................. 2945
hh00544 4743 AGTGGTTCTCAATGGGGGACAATTTCATCCCCCACATTTAGCAATGTCTG 4792
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mfj60347 2945 .................................................. 2945
hh00544 4793 GAGACATTTTGGTTGTCAATACTGAGGGGTGCTACTAATGTTAGGAGTCA 4842
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mfj60347 2945 .................................................. 2945
hh00544 4843 GGTATGCCACTAAATATCCTCCAATGCACAGGACAACTTTAACAAAGAAT 4892
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mfj60347 2945 .................................................. 2945
hh00544 4893 TACTTATACAGTCTAAACTGTCTATACTGCCATTTTTGACAAATCCTGCT 4942
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mfj60347 2945 TTTTCCTCTGTCAGTCTACAGGTTGA........................ 2970
| ||| |||| ||| | |||||
hh00544 4943 TCAGCCTATGTCTGTCATTATGTTGATAATTAACTGAGTAATTTTGAGGC 4992
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mfj60347 2971 .................................................. 2971
hh00544 4993 CATACCTCACAGTATTAAACAGTTGGATGTGTAGTTGTGTGGGTGTATTA 5042
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mfj60347 2971 .................................................. 2971
hh00544 5043 TTGAAAGACAGTAGGCTTTTAAGGACTTGAGTGACTTTGAGGCCTTACCT 5092
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mfj60347 2971 .................................................. 2971
hh00544 5093 TATGAAGCAGTGAGCAGCAGTGATAAGCCAGCTGTTACTAAGCCATGTGG 5142
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mfj60347 2971 .................................................. 2971
hh00544 5143 CTCCGCGTCGGTAGACATTGTTCTGTGGAAGGCTAGCTTGCCAGGGCCAT 5192
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mfj60347 2971 .................................................. 2971
hh00544 5193 TCTCCTTCCTCAGCATCCAGACCCTCTGCTATTCTGTTGCCAGAGGGAGT 5242
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mfj60347 2971 TATTGTGCATTCTACCAAA............................... 2989
||||||||||| | | ||
hh00544 5243 TATTGTGCATTGTCCACAACCTGCTCAAAATACAGTTCTGCTTATGCACG 5292
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mfj60347 2990 .................................................. 2990
hh00544 5293 TATATTGGTATAGTAGAACCTACCACAGAGAATCTATCCCATAAAAGGAA 5342
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mfj60347 2990 ....................................GCCATAGGCGCTGG 3003
|||| ||| |||
hh00544 5343 CTCAAGAAATATTTGTAGAAATGAAGTCCATATTGGGCCAGGTGCGGTGG 5392
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mfj60347 3004 .................................................. 3004
hh00544 5393 CTCCCGCCTGTGTAATGCCAGCATTTTGGGAGGCCAAGGTGGGCAGATCA 5442
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mfj60347 3004 .................................................. 3004
hh00544 5443 CAAGGTTAGGAGATCGAGACCATCCTGGTCAACATGGTGAAAGCCAGTCT 5492
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mfj60347 3004 .................................................. 3004
hh00544 5493 CTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGTGTGTGCTTGTAATC 5542
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mfj60347 3004 ...............................CATGTAACCTATGTGGTAA 3022
|| | | | | | || |
hh00544 5543 CCAGCTACTCAGGAGGCTGAGGCAAGAGAATCACTTGAACCAGGGAGTCA 5592
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mfj60347 3023 GATAGAACACTAATACTACATTGCTGCATTGCTT................ 3056
|| || | | | | ||| | || |||
hh00544 5593 GAGGTTGCAGTGAGCCGAGATTACACCACTGCACTCCAGCCTGGCAACAG 5642
5701 ----+----*----+- 5716
mfj60347 3057 ................ 3057
hh00544 5643 AGCAAGACTCTGTCTC 5658