Comparison of KIAA cDNA sequences between mouse and human (KIAA1978)
<<Original sequence data>>
mouse mKIAA1978 (mfj57255) length: 4234 bp, CDS: 2 - 1465
human KIAA1978 (fj03313) length: 4694 bp, CDS: 175 - 1329
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 717 - 717 1 0 0.0
CDS: 718 - 1329 335 72 17.7
3'UTR: 1330 - 6287 1730 550 24.1
amino acid
CDS: 718 - 1329 120 84 41.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mfj57255 1 .................................................. 1
fj03313 1 CAAGATGGCGGCGGACGTGTCCGTTACTCACCGGCCCCCGCTGAGCCCTA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mfj57255 1 .................................................. 1
fj03313 51 AGTCTGGGGCCGAAGTCGAAGCCGGCGATGCCGCGGAGCGCCGGGCGCCG 100
101 ----+----*----+----*----+----*----+----*----+----* 150
mfj57255 1 .................................................. 1
fj03313 101 GAAGAAGAGCTGCCGCCTCTAGATCCAGAAGAGATCCGGAAACGCCTGGA 150
151 ----+----*----+----*----+----*----+----*----+----* 200
mfj57255 1 .................................................. 1
fj03313 151 ACACACCGAGCGCCAGTTCCGTAACCGCCGCAAGATACTGATCCGGGGCC 200
P P Q D T D P G P
201 ----+----*----+----*----+----*----+----*----+----* 250
mfj57255 1 .................................................. 1
fj03313 201 TCCCGGGGGACGTGACCAACCAGCCTTCGTGACCCTGCTGAATGGGGAGC 250
P G G R D Q P A F V T L L N G E Q
251 ----+----*----+----*----+----*----+----*----+----* 300
mfj57255 1 .................................................. 1
fj03313 251 AGGCCGAGGCCGCAATCAATGCTTTCCACCAGAGCCGCCTGCGGGAGCGT 300
A E A A I N A F H Q S R L R E R
301 ----+----*----+----*----+----*----+----*----+----* 350
mfj57255 1 .................................................. 1
fj03313 301 GAACTGTCGGTGCAGCTGCAGCCCACGGATGCCCTGCTGTGTGTGGCCAA 350
E L S V Q L Q P T D A L L C V A N
351 ----+----*----+----*----+----*----+----*----+----* 400
mfj57255 1 .................................................. 1
fj03313 351 CCTGCCCCCCAGCCTCACACAGCAGCAGTTCGAGGAGCTGGTGCGGCCCT 400
L P P S L T Q Q Q F E E L V R P F
401 ----+----*----+----*----+----*----+----*----+----* 450
mfj57255 1 .................................................. 1
fj03313 401 TCGGCAGCCTGGAGCGCTGCTTCCTGGTCTACAGTGAGCGCACTGGCCAA 450
G S L E R C F L V Y S E R T G Q
451 ----+----*----+----*----+----*----+----*----+----* 500
mfj57255 1 .................................................. 1
fj03313 451 TCCAAGGGCTATGGCTTTGCTGAGTACATGAAGAAGGACTCGGCTGCCCG 500
S K G Y G F A E Y M K K D S A A R
501 ----+----*----+----*----+----*----+----*----+----* 550
mfj57255 1 .................................................. 1
fj03313 501 TGCCAAGTCGGACCTGCTGGGCAAGCCGCTGGGACCACGCACCCTCTACG 550
A K S D L L G K P L G P R T L Y V
551 ----+----*----+----*----+----*----+----*----+----* 600
mfj57255 1 .................................................. 1
fj03313 551 TGCACTGGACGGATGCCGGGCAACTGACGCCTGCCCTTCTCCACTCCCGC 600
H W T D A G Q L T P A L L H S R
601 ----+----*----+----*----+----*----+----*----+----* 650
mfj57255 1 .................................................. 1
fj03313 601 TGCCTCTGTGTGGACCGCCTGCCACCTGGCTTCAACGATGTGGACGCTCT 650
C L C V D R L P P G F N D V D A L
651 ----+----*----+----*----+----*----+----*----+----* 700
mfj57255 1 .................................................. 1
fj03313 651 GTGCCGGGCGCTGTCAGCTGTCCACAGCCCCACCTTCTGCCAGCTGGCGT 700
C R A L S A V H S P T F C Q L A C
701 ----+----*----+----*----+----*----+----*----+----* 750
L K G F A V L E Y E T
mfj57255 1 ................GCTAAAGGGCTTCGCGGTGCTGGAGTACGAGACA 34
||| ||||||||||||||||||||||| |||||
fj03313 701 GCGGCCAGGATGGGCAGCTGAAGGGCTTCGCGGTGCTGGAGTATGAGACG 750
G Q D G Q L K G F A V L E Y E T
751 ----+----*----+----*----+----*----+----*----+----* 800
A E M A E A A Q E R A D G Q A L G
mfj57255 35 GCAGAGATGGCAGAGGCAGCACAAGAACGGGCAGATGGCCAGGCCCTGGG 84
|| |||||||| |||| ||||| | | ||| || |||| | |||||||
fj03313 751 GCTGAGATGGCGGAGGAGGCACAGCAGCAGGCGGACGGCCTGTCCCTGGG 800
A E M A E E A Q Q Q A D G L S L G
801 ----+----*----+----*----+----*----+----*----+----* 850
D S H L R V S F C A P G P P G R S
mfj57255 85 TGACAGCCACCTACGTGTGTCTTTCTGTGCCCCAGGTCCCCCTGGCCGCA 134
| ||||||||| || || || ||||| ||||| || ||||| |||||||
fj03313 801 GGGCAGCCACCTGCGAGTCTCCTTCTGCGCCCCTGGGCCCCCCGGCCGCA 850
G S H L R V S F C A P G P P G R S
851 ----+----*----+----*----+----*----+----*----+----* 900
M L A A L I A A Q A T A L N R G
mfj57255 135 GCATGCTAGCAGCACTCATTGCTGCCCAGGCCACGGCTCTTAATCGAGGC 184
| ||||| || || ||||| ||||||||||||||||| || ||||| ||
fj03313 851 GTATGCTGGCCGCTCTCATCGCTGCCCAGGCCACGGCCCTCAATCGGGGG 900
M L A A L I A A Q A T A L N R G
901 ----+----*----+----*----+----*----+----*----+----* 950
K G L L P E P N L L Q L L N N L G
mfj57255 185 AAGGGACTCCTGCCTGAGCCAAATCTTCTGCAGCTGTTGAACAACCTGGG 234
||||||||||| || ||||| || | ||||||||| | |||||||||||
fj03313 901 AAGGGACTCCTCCCCGAGCCCAACATCCTGCAGCTGCTCAACAACCTGGG 950
K G L L P E P N I L Q L L N N L G
951 ----+----*----+----*----+----*----+----*----+----* 1000
P S A S L Q L L L N P L L H G G A
mfj57255 235 CCCATCTGCATCCCTCCAGCTGCTCCTCAACCCTCTGCTTCATGGGGGAG 284
|||||| || |||||||||||||| |||||||| ||||| ||||| | |
fj03313 951 CCCATCCGCGTCCCTCCAGCTGCTGCTCAACCCCCTGCTCCATGGCAGTG 1000
P S A S L Q L L L N P L L H G S A
1001 ----+----*----+----*----+----*----+----*----+----* 1050
S G K Q G L L G A P P A M P L L
mfj57255 285 CCAGTGGCAAGCAGGGTCTCCTGGGTGCGCCCCCTGCTATGCCACTGCTC 334
| | || |||||||| ||||||||||| ||||| || ||||| ||||||
fj03313 1001 CGGGGGGGAAGCAGGGCCTCCTGGGTGCCCCCCCAGCCATGCCGCTGCTC 1050
G G K Q G L L G A P P A M P L L
1051 ----+----*----+----*----+----*----+----*----+----* 1100
S G P A L S T A L L Q L A L Q S Q
mfj57255 335 AGCGGGCCTGCCCTGTCCACTGCACTGCTGCAGCTAGCCCTGCAGAGCCA 384
| ||||| ||||||||||| || ||| ||||||| |||||||||| |||
fj03313 1051 AATGGGCCAGCCCTGTCCACGGCGCTGTTGCAGCTCGCCCTGCAGACCCA 1100
N G P A L S T A L L Q L A L Q T Q
1101 ----+----*----+----*----+----*----+----*----+----* 1150
S Q -
mfj57255 385 GAGCCAGAA......................................... 393
| |||||||
fj03313 1101 GGGCCAGAAGGTAACACACGCATCCCCCTCACCCACTGCTCTACAGCCCC 1150
G Q K V T H A S P S P T A L Q P L
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mfj57255 394 .................................................. 394
fj03313 1151 TACAGGCTCTTTTCAACACAGCTGGTGCGATCGGTGGGGTGGGGGGACCT 1200
Q A L F N T A G A I G G V G G P
1201 ----+----*----+----*----+----*----+----*----+----* 1250
R A R -
mfj57255 394 ...................CCAGAGCCAGGGT.................. 406
|||| |||||||
fj03313 1201 CTGGCTGTGCCCTGGGGGCGCAGAACCAGGGTGAGGGCGACTCCCCCAAA 1250
L A V P W G R R T R V R A T P P N
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mfj57255 407 .................................................. 407
fj03313 1251 CCCCTGCCTTTCCCACCCACATCCCCATCCCCCTCTGGCAATTGCTCATG 1300
P C L S H P H P H P P L A I A H D
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mfj57255 407 .................................................. 407
fj03313 1301 ATGGTTCGCCATCTTTCCCTCCATTCTGAGAGCGCCCCTGGACTTGGTGC 1350
G S P S F P P F *
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mfj57255 407 .................................................. 407
fj03313 1351 CTGGGGTGGGGTCAGGGGACCTGGACACGCCCATTTACAGCCTGAAACTG 1400
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mfj57255 407 .................................................. 407
fj03313 1401 GGTGTGGGCTGGGAGCGCCGCTGCTGGGCACCAGTTTGTGAATAGACTCT 1450
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mfj57255 407 .................................................. 407
fj03313 1451 GCTCGGAAGCTCTATAGACATGCCTGGGAAAAAACTCCAGGTCTATCCCC 1500
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mfj57255 407 .................................................. 407
fj03313 1501 TCAGTGTGTGCGCACACACACACGCACACCTAGAAACACAGGTATACATA 1550
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mfj57255 407 .................................................. 407
fj03313 1551 TAGACTCACACATACAAAGATGCAAATATACACACAGAGACATAGACACA 1600
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mfj57255 407 .................................................. 407
fj03313 1601 CAAAGACATAAGACAAAGACACACACATAGACACAGACACACATATAGAC 1650
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mfj57255 407 .................................................. 407
fj03313 1651 ACAAGACAGACTCATGCACACAGAAACAAAGACACAGATATACACGCACA 1700
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj57255 407 .................................................. 407
fj03313 1701 CACACACACAGACACACACACACATAGACATACACCCATGCTCCGTCCTG 1750
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj57255 407 .................................................. 407
fj03313 1751 TCTGGTGTGGTTCCCTGGATTCTAAGTCAGGTGTGTCTGTCTGGTGGTAA 1800
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj57255 407 .................................................. 407
fj03313 1801 CTGACAGAATATGTGAGCCTGTGGGTCTGGCCTTCTGTGACTAAAAGTGG 1850
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj57255 407 .................................................. 407
fj03313 1851 CTGAAACACTGTGTGGCTGTCCCATTCCATGTGGCTGCAGTTGATACTGT 1900
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj57255 407 .................................................. 407
fj03313 1901 GCTGCAATCATTGGCCAGGGAACTGGGGCCTGGAGCTCAGGAGACCCTCG 1950
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj57255 407 .................................................. 407
fj03313 1951 GTCACCATGGCTGATGGGACAGTGATAGAGTTGGAGTGTGGCGGGCACTG 2000
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj57255 407 .................................................. 407
fj03313 2001 GGGAACCCTGTGCCTGTCTGCCCAGGATCGGCCGTGCCCTGGAGTTGGGG 2050
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj57255 407 .................................................. 407
fj03313 2051 TGTGTCTGCCAAGACTCTGGGCCACACCTGTCTGCTTCCCTGGGCCACCC 2100
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj57255 407 .................................CAGAAGCCTGGGATCCT 423
||||||| || |||||
fj03313 2101 TGCCCCCATCTGCAACTGTCTGTGCTCTGTCCCTAGAAGCCCGGCATCCT 2150
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj57255 424 GGGCGACTCACCTCTGGGTACCCTCCAGGCCGGGGCCCAACCTTCCAACT 473
||| |||||||| ||||| |||||||| | |||||||| || |||||
fj03313 2151 GGGAGACTCACCCCTGGGCGCCCTCCAGCCTGGGGCCCAGCCAGCCAACC 2200
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj57255 474 CCCTCCTTGGGGAGCTGTCTGC............................ 495
||||||| ||||||||| ||||
fj03313 2201 CCCTCCTCGGGGAGCTGCCTGCAGGTAACGCAGACCCTGCCCACACGGTG 2250
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj57255 496 .................................................. 496
fj03313 2251 TCCCCCAGCCACTTCCCCTTCCTTCCCTGCTACGTGGCCTCGGGTGAGTG 2300
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj57255 496 .................................................. 496
fj03313 2301 ACCCAACCTCTGGGTCCCAGCGCCCTTGTCCATCAGTTGGGTGCCCTCCA 2350
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj57255 496 .................................................. 496
fj03313 2351 CTCAGGGCCCAGGGATGAGCTCTGCTCAGTGGCCAGCATGGATTTGTCTC 2400
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj57255 496 .................................................. 496
fj03313 2401 TTGACCCCTGGGCCCTGGTCCAGGTGGGAGCTGGAGGGCCCTGGGGAGAG 2450
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj57255 496 ...........................................AGGGGGG 502
||| |||
fj03313 2451 GGGTCCTGTGAGCCTGGGCCCCTGAAATCCTCCTTCCCTCCCTAGGAGGG 2500
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj57255 503 GGCCTAGCCCCGGAACTGCCGCCCCGCCGAGGGAAGCCACAACCCTTACT 552
||||| ||||||| ||||||||||| ||||||||||||| |||| | ||
fj03313 2501 GGCCTGCCCCCGGAGCTGCCGCCCCGGCGAGGGAAGCCACCACCCCTGCT 2550
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj57255 553 ACCACCATTGCTGGGTCCCTCTGGGGGTGACCGGGAGCCCATGGGTCTGG 602
||| | |||| || || ||||||||||||||||| || |||| |||
fj03313 2551 GCCATCCGTGCTTGGCCCTGCTGGGGGTGACCGGGAGGCCCTGGGCTTGG 2600
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj57255 603 GTCCCCCAGCAACCCAGCTCACTCCACCCCCAGCCCCTGTGGGGCTCCGA 652
|||||||||| ||||||||||||| ||||| ||||||||||||||||||
fj03313 2601 GTCCCCCAGCGGCCCAGCTCACTCCTCCCCCCGCCCCTGTGGGGCTCCGA 2650
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj57255 653 GGCTCCAACCATAGAGGCCTCCCAAAGGACAGTGGGCCCCTGCCAACGCC 702
||||| || |||||||||| || ||||||||||| ||||| |||||
fj03313 2651 GGCTCTGGCCTCAGAGGCCTCCAGAAAGACAGTGGGCCTCTGCCGACGCC 2700
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj57255 703 CCCTGGGGTCTCACTGCTGGGGGAGCCCCCAAAGGACTACCGCATCCCCC 752
|||||||||||||||||||||||||||||| ||||||||||| || ||||
fj03313 2701 CCCTGGGGTCTCACTGCTGGGGGAGCCCCCCAAGGACTACCGGATTCCCC 2750
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj57255 753 TCAACCCCTACCTGAATCTACACAGCCTGCTTCCATCCAGTAACCTGGCA 802
| || ||||||||||| |||||||||||||| || |||| ||||||||
fj03313 2751 TGAATCCCTACCTGAACCTACACAGCCTGCTCCCGGCCAGCAACCTGGCG 2800
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj57255 803 GGCAAGGAGACCCGGGGCTGGGGAGGCTCTGGGAGAGGCCGCCGCCCAGC 852
|| |||||| ||||||||||||||||| | |||||| |||||||||||||
fj03313 2801 GGTAAGGAGGCCCGGGGCTGGGGAGGCGCCGGGAGAAGCCGCCGCCCAGC 2850
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj57255 853 TGAGCCCCCCTTGCCTAGCCCTGCAGTTCCTGGTGGAGGCAGTGGTAGCA 902
|||| |||| ||| ||| ||| ||||| || |||||
fj03313 2851 TGAGGGCCCCCCAACTAACCCCCCAGCCCCTGGAGGTGGCAG........ 2892
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj57255 903 ACAATGGCAACAAAGCCTTCCAAATGAAGTCCCGCCTGCTCAGCCCCATC 952
|| ||| |||||||||||| | ||||||||||||||||||||| ||
fj03313 2893 .CAGCAGCAGCAAAGCCTTCCAGCTCAAGTCCCGCCTGCTCAGCCCCCTC 2941
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj57255 953 GCCAGCAACCGCCTGCCCCCTGAGCCAGGGCTGCCTGACAGCTATGGCTT 1002
|||| |||||||||||| || ||||| ||| |||||||||| ||||
fj03313 2942 AGCAGCGCCCGCCTGCCCCCCGAACCAGGACTGTCTGACAGCTACAGCTT 2991
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj57255 1003 TGATTATCCCACAGATGTGGGACCTAGACGACTCTTCTCCCACCCTCGGG 1052
|| || ||| | || |||||||| | || |||||||||||||| ||||
fj03313 2992 CGACTACCCCTCGGACATGGGACCTCGGCGGCTCTTCTCCCACCCACGGG 3041
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj57255 1053 AACCAACCTTAGGGGCTCATGGCCCCAGCCGACACAAGATGTCCCCCCCA 1102
||||| || | ||| |||| || ||||||||||||||||||||||||||
fj03313 3042 AACCAGCCCTTGGGCCTCACGGACCCAGCCGACACAAGATGTCCCCCCCG 3091
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj57255 1103 CCTAGCAGCTTCAATGAGCCCCGAAGTGGTGGAGGCAGTGGGGGACCCCT 1152
|| || ||||| || | | || ||||| | | ||||| |||||
fj03313 3092 CCCAGTGGCTTCGGCGAACGGAGCAGCGGTGGGAGTGGCGGGGGCCCCCT 3141
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj57255 1153 CTCTCATTTTTACTCTGGCTCACCCACCTCCTACTTCACCAGTGGCCTAC 1202
||||| || || || ||||| ||||| |||||||||||||| ||||| |
fj03313 3142 GTCTCACTTCTATTCAGGCTCGCCCACTTCCTACTTCACCAGCGGCCTGC 3191
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj57255 1203 AGGCTGGCCTCAAGCAGAGCCACCTGAACAAGGCTGTTGGTTCCTCTCCA 1252
||||||||||||||||||||||||| | ||||| | || || || ||
fj03313 3192 AGGCTGGCCTCAAGCAGAGCCACCTCAGTAAGGCAATCGGCTCTTCCCCG 3241
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj57255 1253 ATGGGCTCCAGTGAAGGGCTCCTGGGCCTGGGCCCTGGGCCCAATGGTCA 1302
|||| ||| | ||||||||||||||||| |||| ||||| ||||||||
fj03313 3242 CTGGGGTCCGGAGAAGGGCTCCTGGGCCTCAGCCCCGGGCCTAATGGTCA 3291
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj57255 1303 CAGTCACCTGCTGAAGACCCCACTGGGTGGCCAGAAACGCAGTTTTTCCC 1352
||| ||||||||||||||||||||||| |||||||||||||| ||| |||
fj03313 3292 CAGCCACCTGCTGAAGACCCCACTGGGCGGCCAGAAACGCAGCTTTGCCC 3341
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj57255 1353 ACCTGCTGCCCTCACCTGAGCCCAGCCCAGAGGGCAGCTACGTGGGCCAG 1402
||||||||||||| || |||||||||||||| |||||||| |||||||||
fj03313 3342 ACCTGCTGCCCTCGCCCGAGCCCAGCCCAGAAGGCAGCTATGTGGGCCAG 3391
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj57255 1403 CACTCCCAGGGCCTCGGCGGCCACTACGCGGACTCCTACCTGAAGCGGAA 1452
||||||||||||||||||||||||||||||||||||||||||||||||||
fj03313 3392 CACTCCCAGGGCCTCGGCGGCCACTACGCGGACTCCTACCTGAAGCGGAA 3441
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj57255 1453 GAGGATTTTCTAAGGGGTCGACACCAGAGATGCTCCAAGGGCCTGCACCA 1502
|||||||||||||| || | |||||||||| |||||||||||||||
fj03313 3442 GAGGATTTTCTAAGTGGCTGGCACCAGAGATAACTCAAGGGCCTGCACCA 3491
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj57255 1503 AGTTGCTTTTGGGTTTTTTCTGGTATTTGTGTTTTCTGGGATTTTATTTT 1552
| | ||||||||||||| | ||| || | ||
fj03313 3492 AATCGCTTTTGGGTTTTCT....................GATGTTTTGTT 3521
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj57255 1553 TATTATTTTTTTTA....ATGTCCTTTCTTTGGGTAATAGAGAAATCTCT 1598
| | ||||||||| || | || ||||| ||||||||| ||||||||
fj03313 3522 TTGTGTTTTTTTTAAACCATTTTCTCTCTTTCGGTAATAGAAAAATCTCT 3571
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj57255 1599 GCAAAAGACTTTGCTGACCAACCAG.........CTGGAGCTCAAGGAAT 1639
| ||||||||| |||||||| ||| | ||||| ||||| |
fj03313 3572 G..AAAGACTTTACTGACCAATCAGCCGGAGCCCCAGGAGCCCAAGGGGT 3619
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj57255 1640 GTGGGGTATCTGGGGCCACACCATTACCTGTGGGCTTGCTCCTGGAGC.C 1688
|||||| | || | | | |||||||||| ||
fj03313 3620 GTGGGGGAGTCTGGAGGCCTCATTATGTCTCTGGCTTGCTCCCCACGCTG 3669
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj57255 1689 AAACCCTGCAGCCTTAAGAGAGAGGGG.CCTGACCTGCTCTCTTTCCCTC 1737
||||||||||||||||||||||||||| || | ||||||||| ||||||
fj03313 3670 AAACCCTGCAGCCTTAAGAGAGAGGGGCCCCGGCCTGCTCTCCCTCCCTC 3719
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj57255 1738 CCTAGCTCCAGGCCTC......................CTCTCCTGCCTC 1765
|| || |||| | ||||||||||
fj03313 3720 CCCCCATCTCCTCCTCCGCTGTGCCCGTCTCTCCGGAGCCCTCCTGCCTC 3769
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj57255 1766 GTCACTCCTGT.GTTCTGGCCTCTTGAGTGCCTTTGGAGGTGTCTCTGAC 1814
| ||||||| || |||||| | ||||||| |||||||| || |||||
fj03313 3770 ATTGCTCCTGTAATTTTGGCCTTTCGAGTGCC.TTGGAGGTTTCCCTGAC 3818
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj57255 1815 CT...GTGAGGAT.CAGAGACAGTCCCC...GTTTTTAAACTTCGACAAT 1857
|| |||| ||| ||||||| ||| || ||||| ||||| |||||
fj03313 3819 CTCCCGTGAAGATACAGAGACTGTCTCCTTTTTTTTTTAACTTTGACAAC 3868
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj57255 1858 TGACTTTTATTTCCTTTTCTAATTTTTATTATTTTTTAAAACAACCAGGA 1907
|||||| | ||||||||||||| ||||| ||||| |||| |||
fj03313 3869 TGACTTCTGTTTCCTTTTCTAAGTTTTA....TTTTTCAAACCACC.... 3910
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj57255 1908 TGATTATCACATCTACTCCCCCATCCGTCCAGAAAAGCCCCAAAT.TGAT 1956
|| || | ||||| | ||||
fj03313 3911 ............................CCGGACAGCCCCCAGCTCTGAT 3932
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj57255 1957 TCCTTCAGGGTCTGGCCTGCCCAGG.CTCTATTCCACATGTGCAGGTTCC 2005
||||||| || | |||||| || || | | |||||||| | ||||
fj03313 3933 TCCTTCAAGGCCCGGCCTGTCCGGGCCACCATTCCACACCTTGCGGTT.. 3980
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj57255 2006 AACAGCTTAACCCTATTCTCTTCCCAGTCATCTGCTGCAGGTATAGCTGT 2055
| || | | | |||||| ||| ||||||||| || |||||
fj03313 3981 ......TGAAACAGCTGTTTTTCCCA..CATTTGCTGCAGGCATGGCTGT 4022
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj57255 2056 CTCATGCCCCTGCCTGCCTATTCTGGCCAGTACCCTAAGCCCCAAGATCT 2105
||| |||||||||||||| | ||||||| ||||| |||| | |
fj03313 4023 CTCCTGCCCCTGCCTGCCCA.TCTGGCCTATACCC.CAGCCGTGGGGCCC 4070
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj57255 2106 CCAGCCCCTGCCCCAGTATCCTTGCCTTCTGATGCCTT.AAAGTTGGGCC 2154
| ||||||| ||| ||| |||||||||||||| |||| ||||||
fj03313 4071 GGGGTCCCTGCCGCAGCCCCCTCCCCTTCTGATGCCTTAAAAGCTGGGCC 4120
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj57255 2155 ACAGGTCCTGCTGGGTCAGAGCCTCACAGATGCGGAGCTCCAAAAGCTCC 2204
|||| |||||| || |||||| ||||||||| ||||| ||||
fj03313 4121 CCAGGCCCTGCT.GGCCAGAGC..CACAGATGCCAAGCTCTGGGAGCTTG 4167
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj57255 2205 GCTCAGGACCAAAGAGCTCTGGCCTAGGGTT....CATCCTTTCTCCAGG 2250
|| |||||||| ||||||||||||||| | | || | | | |
fj03313 4168 ACTATGGACCAAACAGCTCTGGCCTAGGGATTGGGCCACCCTACCCAGGA 4217
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj57255 2251 TGTCTGCCCTGTGGAC...AGAAGGCTAAAGCCTTGATCTTGGCAAACCA 2297
| || ||||| |||| |||||| |||||||| |||||||| ||||
fj03313 4218 TCTCCACCCTGGGGACAGTAGAAGGGGAAAGCCTTCATCTTGGCGAACCG 4267
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj57255 2298 CCCCTTTTGCCCAAAGCCTGGATGCAGAGACCAGTATTTTCTGCTGGCTT 2347
||| ||
fj03313 4268 GCCCCACCACC....................................... 4278
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj57255 2348 CAACAGTCTCCCCTGCTGTCTGTGAAAGGTGACCATTGTACCCAGGCCAC 2397
|| | ||||| |||| |
fj03313 4279 ................................CCCTCCTACCCGGGCCTC 4296
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj57255 2398 TGGGCCTCTACCATGTTCTTTCAAACCCAGGTCATTACCATCCCCAGGCT 2447
| | | ||| ||||| |||| |
fj03313 4297 CGTG...CAGAGATGGGCTTTCTCTGCCAGTCC................. 4326
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj57255 2448 GGATCACTGGAGCAGGCCTCCTCTCTGTCCATGTGAGGGGGACCTAGGGG 2497
||| || |||||| || ||| |||| |
fj03313 4327 ................CCTGCTGTCTGTCTGTGGGAGTCGGACAT..... 4355
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj57255 2498 CTCTGCCCTTAGCCAGCTGAGCCACCACCAGCCTCCCTCCCCAAACATGA 2547
| ||||| | || | |
fj03313 4356 .TGTGCCCATCTCCCGGAG............................... 4373
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj57255 2548 TAACCCAAACCCACTCCAGTGGGTGTATCTCACCCCCTCACCCCACCCCC 2597
fj03313 4374 .................................................. 4374
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj57255 2598 ACCCCCTGCATAGACCTTTGCTGAATTAAAGTTTGTAAGTAAACGGTTTT 2647
fj03313 4374 .................................................. 4374
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mfj57255 2648 AAAAAAAAAATCAGAGCTGGCTGGTTCTTGATATAAACCATGGGCCAGCA 2697
fj03313 4374 .................................................. 4374
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mfj57255 2698 AACTAGCTCAGAATTCTGGTAACACAGACAGCCTGAGTTTTATCCCTCTG 2747
||||||
fj03313 4374 ............................................CCTCTG 4379
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mfj57255 2748 CCCCAAATGGTGGAAGGAGAGAACTGACTCCCGCAGATTGACCACTGACC 2797
| | | |
fj03313 4380 CTGTCACTCG........................................ 4389
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mfj57255 2798 TACACACATGTCACGGATGGGCTCATACACACAATCCCTAAAAATTTAAG 2847
fj03313 4390 .................................................. 4390
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mfj57255 2848 TTGGGCTTGGAGGCCAGCCTGGTCTATATGAATTGCTTAGAGACTTAAGA 2897
| || | | |||||||
fj03313 4390 .................CTTGTTGAAGATGAATT................ 4406
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mfj57255 2898 ATTTCTCAGTCTATAGAGATTCTGTCTCAAACAAAATTTAAATACTGGTT 2947
|| ||| ||| |
fj03313 4407 ....................................CTTGAATTCTGCCT 4420
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mfj57255 2948 GCACATAACCGGTAATTCCAGCAAAGGAATTCGGAGATCAAGGCCAGACT 2997
|| || ||||
fj03313 4421 GCCCACCCCCGG...................................... 4432
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mfj57255 2998 AGGGGATCCTGTCTAAAAATTAGAGAACTCAGAGGTTGGTCCCAATTGCC 3047
fj03313 4433 .................................................. 4433
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mfj57255 3048 GAACGTAGTTTTAGTTCCCAGCCCCACACTACCCATCAACTCTTCTGGGC 3097
fj03313 4433 .................................................. 4433
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mfj57255 3098 TCCATAGGCACCCACTTGGTGCACATACGTACATATAAGCAGAACACATA 3147
fj03313 4433 .................................................. 4433
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mfj57255 3148 CAGTACGACCTAAGGGAAGAAATATCCAACCACAGGGCGAGGCCGGAAGT 3197
fj03313 4433 .................................................. 4433
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mfj57255 3198 CCAGCTAGATCCCAGTGCATCACCTTTGACCTCACACGGCGCCCAAACGC 3247
fj03313 4433 .................................................. 4433
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mfj57255 3248 TGCGTTTACTGTCGCTGAGGACGCGCAGAGCATGCTAGGTCTTCCGGTCA 3297
fj03313 4433 .................................................. 4433
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mfj57255 3298 CGTGGCCTATCATGGCCGCCTCCATGGCCCGGGGCGTGAGCGCCCGGGTC 3347
fj03313 4433 .................................................. 4433
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mfj57255 3348 CTGTTACGGGCGGCCGGGGGATCTTGGGGACCCAGGGCCGGGCACGCGGC 3397
fj03313 4433 .................................................. 4433
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mfj57255 3398 GGTAACATCTAGGACGTTCGGGACTACAGGTACATAGGGCTGGGCCGAGC 3447
||| | | | | |||||
fj03313 4433 .........................CCAGATCCCTGGAGCTGG....... 4450
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mfj57255 3448 CGCGGCGTGCAGCGAGGCCGCAGCCGCTCACCCACTCGTGTGTTTCCAGG 3497
fj03313 4451 .................................................. 4451
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mfj57255 3498 CGAGCGGCGTGCTGGCGAGGAGGCGGCGGACAGCCCGGAGCTGCCCCGGG 3547
fj03313 4451 .................................................. 4451
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mfj57255 3548 ACGTGTGAGTGCCCCTCGTGCCACGCCCTGCCCCTCCCTGCCACTCCCTG 3597
|||
fj03313 4451 ..............................................CCTC 4454
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mfj57255 3598 CCTCCGGCTCAGCACCTGCACCCTGTTTGTCCCCAGGGTCAACGTGGTGT 3647
| ||| || ||| || | | || | | | | | |||
fj03313 4455 CTTCCAGCCCAGTGCCAGAAACCAGCACTCCATGAAGATAAAC....... 4497
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mfj57255 3648 TCGTGGACCGCTCTGGCAAGCGGATCCCGGTGAGGGGCAAAGTCGGGGAC 3697
fj03313 4498 .................................................. 4498
5751 ----+----*----+----*----+----*----+----*----+----* 5800
mfj57255 3698 AATGTTCTATACCTGGCCCAGCGCCACGGGGTGGACCTGGAAGGGGCCTG 3747
|||| || || |||| | |||||||
fj03313 4498 ...........TCTGGGCCCGC.CCACCAGCAGGACCTG........... 4524
5801 ----+----*----+----*----+----*----+----*----+----* 5850
mfj57255 3748 CGAAGCATCCCTGGCCTGTTCCACCTGTCATGTGTATGTGAGTGAGGCCC 3797
fj03313 4525 .................................................. 4525
5851 ----+----*----+----*----+----*----+----*----+----* 5900
mfj57255 3798 ACCTGGATCTCCTGCCTCCTCCTGAGGAGAGGGAGGACGACATGTTGGAC 3847
|| ||||||| ||
fj03313 4525 ................TCGACCTGAGGTGA.................... 4538
5901 ----+----*----+----*----+----*----+----*----+----* 5950
mfj57255 3848 ATGGCTCCACTGCTCCAAGAGAACTCAAGACTGGGCTGCCAGATTGTGCT 3897
| ||| || | | ||||||| |||| ||
fj03313 4539 .......CCCTGGGCCTTGCCCCCAGCCAACTGGGCCACCAGCTT..... 4576
5951 ----+----*----+----*----+----*----+----*----+----* 6000
mfj57255 3898 GACCCCTGAGCTAGAGGGAGTTGAATTTGCTCTTCCCAAGATCACCAGGA 3947
|
fj03313 4577 .............................................CCCTC 4581
6001 ----+----*----+----*----+----*----+----*----+----* 6050
mfj57255 3948 ACTTCTATGTGGACGGCCACATCCCCAAGCCCCACTGACATGAGGCCACT 3997
||| | ||| | |||||| ||||| | | | | | |
fj03313 4582 CCTTGACTCTGGGGGTCCACAT.........CCACTCCAAGGGGACTATT 4622
6051 ----+----*----+----*----+----*----+----*----+----* 6100
mfj57255 3998 GGACAGACCAGGCCATGGAACTGAAAAGAAAAGCCACGCTTCCTACTCCA 4047
| |||| || ||| || || ||
fj03313 4623 CCCCCGACCCCACC...................CCAGTCTCCCCAC.... 4649
6101 ----+----*----+----*----+----*----+----*----+----* 6150
mfj57255 4048 GAGGACGGACTGCCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAG 4097
|||||| ||| | | ||| |
fj03313 4650 ....ACGGACCTTTGCTGAATTAAAGTTTGTA.................. 4677
6151 ----+----*----+----*----+----*----+----*----+----* 6200
mfj57255 4098 AGCTGCCACTGGGGACAGCCAGTGTCTGAGCCCTGAGGGGGATGGGTCTC 4147
fj03313 4678 .................................................. 4678
6201 ----+----*----+----*----+----*----+----*----+----* 6250
mfj57255 4148 CATCTTGGGTGTGTCAGTCCACCAGGGAGAATCGAACTATAAATTAAGGA 4197
fj03313 4678 .................................................. 4678
6251 ----+----*----+----*----+----*----+-- 6287
mfj57255 4198 TGGACTCTAACCAGAGCTGCAATAAAAAGTCACACAC 4234
| |||| || | |
fj03313 4678 ....................AGTAAATGGTTTTAAAG 4694