FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0886.ptfa, 1245 aa vs ./tmplib.26680 library 1767772 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 14.0483+/-0.00945; mu= -27.3341+/- 0.623 mean_var=560.9857+/-137.822, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0542 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0845 ( 1046 res) mbh00862 (1046) 291 38 0.0079 >>mKIAA0845 ( 1046 res) mbh00862 (1046 aa) initn: 190 init1: 100 opt: 291 Z-score: 143.2 bits: 38.4 E(): 0.0079 Smith-Waterman score: 291; 23.729% identity (25.282% ungapped) in 472 aa overlap (112-573:474-926) 90 100 110 120 130 140 mKIAA0 PTMEDVDQSSLVSSSADRPPRPLPAFKYQFVTEPEDEEDEEDEEEEEDDEDLEELEVLER ::: :: :. : . .. :. :: : :. mKIAA0 IKVKSEEMIKVVEKSEKETVIVEGQTEEIRVTEGVTEE-EDKEAQGQEGEEAEEGEEKEE 450 460 470 480 490 500 150 160 170 180 190 200 mKIAA0 KPAAGLSAAPVPPAAAPLLDFSSDSVPPAPRGPLPAAPPTAPERQPSWERSPA-ASAPSL . .:. .. :. ::.: . .: : ..: : : . ..:. .::: :..:. mKIAA0 EEGAAATSPPAEEAASPEKETKS-RVKEEAKSPGEAKSP-GEAKSPGEAKSPAEAKSPG- 510 520 530 540 550 210 220 230 240 250 260 mKIAA0 PPAAAVLPSKLPEDDEPPARPPAPAGASPLAEPAAPPSTPAAPKRRGSGSVDETLFALPA : . .: : . . ::.: .:: :. :: : :.: .: . : : .. . mKIAA0 -EAKSPGEAKSPAEPKSPAEPKSPAEAKSPAE-AKSPATVKSPGEAKSPSEAKSPAEAKS 560 570 580 590 600 610 270 280 290 300 310 320 mKIAA0 ASEPVIPSSAEKIMDLKEQPGNTVSSGQEDFPSVLFETAASLPSLSPLSTVSFKEHGYLG .: :. :.. ..: .::.. : .. :. :. . :: . : : : mKIAA0 PAEAKSPAEAKSPAEVK-SPGEAKSPAEPKSPA---EAKSPAEVKSPAEAKSPAEVKSPG 620 630 640 650 660 670 330 340 350 360 370 mKIAA0 NLSAVASTEGTIEETLNEASRELPERATNPFVNRESAEFSVLEYSEMGSSFN-GSPKGES . .. :.... : . :. . : .: .: . :: . .: : .. ::. . mKIAA0 EAKSPAAVKSPAEAK-SPAAVKSPGEAKSPGEAKSPAEAK--SPAEAKSPIEVKSPEKAK 680 690 700 710 720 730 380 390 400 410 420 430 mKIAA0 AMLVENTKEEVIVRSKDKEDLVCSAALHNPQE--SPATLTKVVKEDGVMSPEKT--MDIF . . :..: . ..: .: . .. : : :: . ::: :. :::. .:. mKIAA0 TPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKE-GAKPPEKAKPLDVK 740 750 760 770 780 440 450 460 470 480 490 mKIAA0 NEMKMSVVAPVREEY---ADFKPFEQAWEVKDTYEGSRDVLAARANMESKVDKKCFEDSL . .. ::.:: .:..: ::. : . :... . :. .. . mKIAA0 SPEAQT---PVQEEAKHPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPV 790 800 810 820 830 840 500 510 520 530 540 550 mKIAA0 EQKSHGKDSESR-NENASFPSTPELVKDGSRAYITCDSFTSATESTAANIFPVLEDHTSE ... ..:. .. .:. ..:. .:.... .. .: . .: :.: mKIAA0 KEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAE 850 860 870 880 890 900 560 570 580 590 600 610 mKIAA0 NKTDEKKIEERKAQIITEKTSPKTSNPFLVAIHDSEADYVTTDNLSKVTEAVVATMPEGL : .: :.: . .:. .: mKIAA0 AKKEEAG--EKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPTETEK 910 920 930 940 950 960 1245 residues in 1 query sequences 1767772 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:31:11 2006 done: Mon Mar 27 10:31:12 2006 Scan time: 1.150 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]