# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj54204.fasta.nr -Q ../query/mKIAA1144.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1144, 512 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916649 sequences Expectation_n fit: rho(ln(x))= 4.7172+/-0.000186; mu= 14.1560+/- 0.010 mean_var=69.2210+/-13.802, 0's: 28 Z-trim: 55 B-trim: 2564 in 1/65 Lambda= 0.154154 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|24418468|sp|O35174.1|KCNS2_MOUSE RecName: Full= ( 477) 3172 714.6 1.5e-203 gi|24418461|sp|Q9ER26.1|KCNS2_RAT RecName: Full=Po ( 477) 3162 712.3 7.1e-203 gi|73974094|ref|XP_539100.2| PREDICTED: similar to ( 510) 3141 707.7 1.9e-201 gi|109087045|ref|XP_001094800.1| PREDICTED: potass ( 477) 3133 705.9 6.2e-201 gi|194036997|ref|XP_001928892.1| PREDICTED: simila ( 477) 3129 705.0 1.2e-200 gi|24418481|sp|Q9ULS6.2|KCNS2_HUMAN RecName: Full= ( 477) 3123 703.7 2.9e-200 gi|119906727|ref|XP_592772.3| PREDICTED: similar t ( 477) 3121 703.2 4e-200 gi|126322140|ref|XP_001369106.1| PREDICTED: simila ( 477) 2976 671.0 2e-190 gi|149622655|ref|XP_001514820.1| PREDICTED: simila ( 504) 2506 566.5 6.1e-159 gi|118087222|ref|XP_428021.2| PREDICTED: similar t ( 447) 2504 566.0 7.7e-159 gi|47217887|emb|CAG05009.1| unnamed protein produc ( 479) 2484 561.5 1.8e-157 gi|118100541|ref|XP_001232667.1| PREDICTED: simila ( 469) 1785 406.1 1.1e-110 gi|189520680|ref|XP_001922193.1| PREDICTED: simila ( 487) 1784 405.9 1.3e-110 gi|148666013|gb|EDK98429.1| mCG1037961 [Mus muscul ( 491) 1715 390.5 5.5e-106 gi|81897133|sp|Q8BQZ8.1|KCNS3_MOUSE RecName: Full= ( 491) 1715 390.5 5.5e-106 gi|149408753|ref|XP_001506624.1| PREDICTED: simila ( 494) 1715 390.5 5.5e-106 gi|50745143|ref|XP_426211.1| PREDICTED: similar to ( 494) 1714 390.3 6.4e-106 gi|109102073|ref|XP_001092885.1| PREDICTED: potass ( 491) 1712 389.9 8.7e-106 gi|24418459|sp|O88759.1|KCNS3_RAT RecName: Full=Po ( 491) 1711 389.6 1e-105 gi|62630224|gb|AAX88969.1| unknown [Homo sapiens] ( 491) 1708 389.0 1.6e-105 gi|16198531|gb|AAH15947.1| Potassium voltage-gated ( 491) 1707 388.8 1.9e-105 gi|160142685|sp|Q9BQ31.2|KCNS3_HUMAN RecName: Full ( 491) 1707 388.8 1.9e-105 gi|54697186|gb|AAV38965.1| potassium voltage-gated ( 492) 1707 388.8 1.9e-105 gi|2739121|gb|AAB94882.1| Shab-related delayed-rec ( 491) 1706 388.5 2.2e-105 gi|24418478|sp|Q9TT17.1|KCNS3_RABIT RecName: Full= ( 491) 1705 388.3 2.5e-105 gi|13278747|gb|AAH04148.1| Potassium voltage-gated ( 491) 1703 387.9 3.5e-105 gi|30584613|gb|AAP36559.1| Homo sapiens potassium ( 492) 1703 387.9 3.5e-105 gi|60652544|gb|AAX33295.1| potassium voltage-gated ( 491) 1702 387.6 4e-105 gi|67097562|gb|AAY67751.1| potassium voltage-gated ( 491) 1701 387.4 4.7e-105 gi|126305418|ref|XP_001362177.1| PREDICTED: simila ( 492) 1692 385.4 1.9e-104 gi|57098457|ref|XP_540095.1| PREDICTED: similar to ( 491) 1691 385.2 2.2e-104 gi|224048774|ref|XP_002196996.1| PREDICTED: simila ( 493) 1691 385.2 2.2e-104 gi|194220944|ref|XP_001918281.1| PREDICTED: simila ( 491) 1686 384.1 4.8e-104 gi|189543121|ref|XP_699543.3| PREDICTED: similar t ( 379) 1583 361.1 3.1e-97 gi|190337460|gb|AAI63398.1| Similar to potassium v ( 499) 1542 352.1 2.1e-94 gi|47210943|emb|CAF91112.1| unnamed protein produc ( 487) 1499 342.5 1.6e-91 gi|47212422|emb|CAF93578.1| unnamed protein produc ( 697) 1358 311.3 5.6e-82 gi|224077998|ref|XP_002190490.1| PREDICTED: hypoth ( 405) 1274 292.4 1.6e-76 gi|81097675|gb|AAI09402.1| Zgc:123261 [Danio rerio ( 424) 1271 291.7 2.6e-76 gi|55962430|emb|CAI11829.1| novel protein similar ( 416) 1267 290.8 4.8e-76 gi|56207944|emb|CAI21201.1| novel protein similar ( 494) 1074 248.0 4.5e-63 gi|109129350|ref|XP_001112505.1| PREDICTED: potass ( 519) 1037 239.8 1.4e-60 gi|80479036|gb|AAI09204.1| Potassium voltage-gated ( 519) 1017 235.3 3e-59 gi|26006803|sp|Q8TDN1.1|KCNG4_HUMAN RecName: Full= ( 519) 1016 235.1 3.6e-59 gi|119615894|gb|EAW95488.1| potassium voltage-gate ( 539) 1016 235.1 3.7e-59 gi|114663882|ref|XP_523443.2| PREDICTED: potassium ( 519) 1014 234.7 4.8e-59 gi|109111683|ref|XP_001086960.1| PREDICTED: simila ( 545) 1012 234.2 6.8e-59 gi|114623626|ref|XP_528530.2| PREDICTED: potassium ( 545) 1003 232.2 2.7e-58 gi|149042788|gb|EDL96362.1| potassium voltage-gate ( 514) 1001 231.8 3.6e-58 gi|26006804|sp|Q8TDN2.1|KCNV2_HUMAN RecName: Full= ( 545) 997 230.9 6.9e-58 >>gi|24418468|sp|O35174.1|KCNS2_MOUSE RecName: Full=Pota (477 aa) initn: 3172 init1: 3172 opt: 3172 Z-score: 3810.6 bits: 714.6 E(): 1.5e-203 Smith-Waterman score: 3172; 100.000% identity (100.000% similar) in 477 aa overlap (36-512:1-477) 10 20 30 40 50 60 mKIAA1 RGSFPPASAAGSRAPRCSAPARRGRLGISSMTRQSLWDVSDTDVEDGEIRINVGGFKRRL :::::::::::::::::::::::::::::: gi|244 MTRQSLWDVSDTDVEDGEIRINVGGFKRRL 10 20 30 70 80 90 100 110 120 mKIAA1 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH 400 410 420 430 440 450 490 500 510 mKIAA1 KVKSLMASLTNMSRSSPSELSLDDSLH ::::::::::::::::::::::::::: gi|244 KVKSLMASLTNMSRSSPSELSLDDSLH 460 470 >>gi|24418461|sp|Q9ER26.1|KCNS2_RAT RecName: Full=Potass (477 aa) initn: 3162 init1: 3162 opt: 3162 Z-score: 3798.5 bits: 712.3 E(): 7.1e-203 Smith-Waterman score: 3162; 99.581% identity (100.000% similar) in 477 aa overlap (36-512:1-477) 10 20 30 40 50 60 mKIAA1 RGSFPPASAAGSRAPRCSAPARRGRLGISSMTRQSLWDVSDTDVEDGEIRINVGGFKRRL ::::::::.:.::::::::::::::::::: gi|244 MTRQSLWDLSETDVEDGEIRINVGGFKRRL 10 20 30 70 80 90 100 110 120 mKIAA1 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH 400 410 420 430 440 450 490 500 510 mKIAA1 KVKSLMASLTNMSRSSPSELSLDDSLH ::::::::::::::::::::::::::: gi|244 KVKSLMASLTNMSRSSPSELSLDDSLH 460 470 >>gi|73974094|ref|XP_539100.2| PREDICTED: similar to Pot (510 aa) initn: 3124 init1: 3091 opt: 3141 Z-score: 3772.9 bits: 707.7 E(): 1.9e-201 Smith-Waterman score: 3141; 92.398% identity (97.076% similar) in 513 aa overlap (2-512:1-510) 10 20 30 40 50 mKIAA1 CLPAGR-GSFPPASAAGSRAPRCSAPARRGRL-GISSMTRQSLWDVSDTDVEDGEIRINV .:..: :.:: :. .:.: :: : .: : :::::.: ::.....:::::::.:: gi|739 MPTSRSGKFP---AGLGRGPPCSQRRRAARAPGASSMTRRSPWDANEANVEDGEIRVNV 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 GGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLH :::.::::::::::::::::::::::.::::::::::::::.:::::::::::::::::: gi|739 GGFRRRLRSHTLLRFPETRLGRLLLCRSREAILELCDDYDDAQREFYFDRNPELFPYVLH 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 FYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQES 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 TTSSFDEILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIIT ::::::::::::.:::::::::::::::::::::::::::::::.::::::::::::::: gi|739 TTSSFDEILAFYSDASKFDGQPLGNFRRQLWLALDNPGYSVLSRIFSVLSILVVLGSIIT 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 MCLNSLPDFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MCLNSLPDFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLI 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 DLMSIVPFYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLK ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|739 DLMSIVPFYITLVVNLVVESTPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLK 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 YSYKEVGLLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPG :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|739 YSYKEVGLLLLYLSVGISIFSVVAYTIEKEENEGLTTIPACWWWATVSMTTVGYGDVVPG 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA1 TTAGKLTASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|739 TTAGKLTASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSIN 420 430 440 450 460 470 480 490 500 510 mKIAA1 LRDYYAHKVKSLMASLTNMSRSSPSELSLDDSLH :::::::::::::::::::::::::::::.:: : gi|739 LRDYYAHKVKSLMASLTNMSRSSPSELSLNDSPH 480 490 500 510 >>gi|109087045|ref|XP_001094800.1| PREDICTED: potassium (477 aa) initn: 3133 init1: 3133 opt: 3133 Z-score: 3763.7 bits: 705.9 E(): 6.2e-201 Smith-Waterman score: 3133; 98.323% identity (99.790% similar) in 477 aa overlap (36-512:1-477) 10 20 30 40 50 60 mKIAA1 RGSFPPASAAGSRAPRCSAPARRGRLGISSMTRQSLWDVSDTDVEDGEIRINVGGFKRRL :: :::::::...::::::::::::::::: gi|109 MTGQSLWDVSEANVEDGEIRINVGGFKRRL 10 20 30 70 80 90 100 110 120 mKIAA1 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP ::::::::::::::::::::::::::::::::::::::::.::::::.:::::::::::: gi|109 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSILSILVVMGSIITMCLNSLP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|109 FYITLVVNLVVESTPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH 400 410 420 430 440 450 490 500 510 mKIAA1 KVKSLMASLTNMSRSSPSELSLDDSLH ::::::::::::::::::::::.:::: gi|109 KVKSLMASLTNMSRSSPSELSLNDSLH 460 470 >>gi|194036997|ref|XP_001928892.1| PREDICTED: similar to (477 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 3758.9 bits: 705.0 E(): 1.2e-200 Smith-Waterman score: 3129; 98.532% identity (99.790% similar) in 477 aa overlap (36-512:1-477) 10 20 30 40 50 60 mKIAA1 RGSFPPASAAGSRAPRCSAPARRGRLGISSMTRQSLWDVSDTDVEDGEIRINVGGFKRRL :: :::::::...::::::::::::::::: gi|194 MTGQSLWDVSEANVEDGEIRINVGGFKRRL 10 20 30 70 80 90 100 110 120 mKIAA1 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DFQIPDSQGTPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|194 FYITLVVNLVVESTPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH 400 410 420 430 440 450 490 500 510 mKIAA1 KVKSLMASLTNMSRSSPSELSLDDSLH ::::::::::::::::::::::.:::: gi|194 KVKSLMASLTNMSRSSPSELSLNDSLH 460 470 >>gi|24418481|sp|Q9ULS6.2|KCNS2_HUMAN RecName: Full=Pota (477 aa) initn: 3123 init1: 3123 opt: 3123 Z-score: 3751.7 bits: 703.7 E(): 2.9e-200 Smith-Waterman score: 3123; 98.319% identity (99.790% similar) in 476 aa overlap (36-511:1-476) 10 20 30 40 50 60 mKIAA1 RGSFPPASAAGSRAPRCSAPARRGRLGISSMTRQSLWDVSDTDVEDGEIRINVGGFKRRL :: :::::::...::::::::::::::::: gi|244 MTGQSLWDVSEANVEDGEIRINVGGFKRRL 10 20 30 70 80 90 100 110 120 mKIAA1 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP ::::::::::::::::::::::::::::::::::::::::.::::::.:::::::::::: gi|244 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSILSILVVMGSIITMCLNSLP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|244 FYITLVVNLVVESTPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH 400 410 420 430 440 450 490 500 510 mKIAA1 KVKSLMASLTNMSRSSPSELSLDDSLH ::::::::::::::::::::::.::: gi|244 KVKSLMASLTNMSRSSPSELSLNDSLR 460 470 >>gi|119906727|ref|XP_592772.3| PREDICTED: similar to Po (477 aa) initn: 3121 init1: 3121 opt: 3121 Z-score: 3749.3 bits: 703.2 E(): 4e-200 Smith-Waterman score: 3121; 98.113% identity (99.581% similar) in 477 aa overlap (36-512:1-477) 10 20 30 40 50 60 mKIAA1 RGSFPPASAAGSRAPRCSAPARRGRLGISSMTRQSLWDVSDTDVEDGEIRINVGGFKRRL :: :::::::...::::::::::::::.:: gi|119 MTGQSLWDVSEANVEDGEIRINVGGFKKRL 10 20 30 70 80 90 100 110 120 mKIAA1 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|119 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDAQREFYFDRNPELFPYVLHFYHTGKL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFQIPDRQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|119 FYITLVVNLVVESTPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH 400 410 420 430 440 450 490 500 510 mKIAA1 KVKSLMASLTNMSRSSPSELSLDDSLH ::::::::::::::::::::::.:::: gi|119 KVKSLMASLTNMSRSSPSELSLNDSLH 460 470 >>gi|126322140|ref|XP_001369106.1| PREDICTED: similar to (477 aa) initn: 2976 init1: 2976 opt: 2976 Z-score: 3575.0 bits: 671.0 E(): 2e-190 Smith-Waterman score: 2976; 92.872% identity (98.323% similar) in 477 aa overlap (36-512:1-477) 10 20 30 40 50 60 mKIAA1 RGSFPPASAAGSRAPRCSAPARRGRLGISSMTRQSLWDVSDTDVEDGEIRINVGGFKRRL :: ::: :.:... ::.:: .::::::..: gi|126 MTGQSLSDLSEANFEDSEISVNVGGFKKKL 10 20 30 70 80 90 100 110 120 mKIAA1 RSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKL ::::::::::::::::: :.:.:.::::::::::.: ::::::::::::::::::.:::: gi|126 RSHTLLRFPETRLGRLLHCRSKESILELCDDYDDAQNEFYFDRNPELFPYVLHFYNTGKL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 HVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDE :::.:::::::::::::::::::::::::::::::::.::.::::::::::::::::::: gi|126 HVMGELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKMEPDQEKWDEQSDQESTTSSFDE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 ILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLP ::::::::::::::::::.::::::::::::::.::::::.:::.::::::.:::::::: gi|126 ILAFYNDASKFDGQPLGNLRRQLWLALDNPGYSILSRVFSILSIMVVLGSIVTMCLNSLP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 DFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVP :: :::::::: ::::::::::::::::::::::::::.:.:.:::::::::::::::.: gi|126 DFLIPDSQGNPEEDPRFEIVEHFGIAWFTFELVARFAVTPEFFKFFKNALNLIDLMSIIP 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVG 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAH 400 410 420 430 440 450 490 500 510 mKIAA1 KVKSLMASLTNMSRSSPSELSLDDSLH ::::::::::::::::::::::.:::: gi|126 KVKSLMASLTNMSRSSPSELSLNDSLH 460 470 >>gi|149622655|ref|XP_001514820.1| PREDICTED: similar to (504 aa) initn: 2006 init1: 2006 opt: 2506 Z-score: 3009.8 bits: 566.5 E(): 6.1e-159 Smith-Waterman score: 2506; 79.874% identity (92.453% similar) in 477 aa overlap (37-511:32-503) 10 20 30 40 50 60 mKIAA1 GSFPPASAAGSRAPRCSAPARRGRLGISSMTRQSLWDVSDTDVEDGEIRINVGGFKRRLR ::: :::.:. .::: :::::.:..: gi|149 VPPTGGGPVLQLCTTLSAVHNGFVVHALLSTRQ---DVSQTEQAEGEICINVGGLKQKLL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 SHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKLH .:.:::::::::::: : :: ::::::::::: : :.::::.:.:::::::::.::::: gi|149 PRTVLRFPETRLGRLLRCGSRAAILELCDDYDDSQGEYYFDRDPRLFPYVLHFYRTGKLH 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 VMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQ--EKWDEQSDQESTTSSFD : ..:::::::::::::::.:. ::.::. .:.:::.:: ..:...:..::..:::: gi|149 VTGQLCVFSFSQEIEYWGIDELSIDACCGPGYRGRKTEPTAGPDRWEDRSERESAASSFD 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 EILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSL :.:::: :::.:::.::: .::.::::::::: :: ::.:.:::.:::::::.::::::: gi|149 ELLAFYRDASRFDGRPLGRLRRRLWLALDNPGRSVPSRAFGVLSVLVVLGSIVTMCLNSL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 PDFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIV :::. : . : ::::::: ::.::::::::::.::::::::: .::.::::::::.::: gi|149 PDFR-P-AGGRAGEDPRFEAVERFGIAWFTFELLARFAVAPDFSRFFRNALNLIDLLSIV 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 PFYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEV :::.::.::::.::::.::::::::::::::::::::::::::::::::::::::::.:: gi|149 PFYVTLAVNLVAESSPALANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYREV 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 GLLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKL ::::::::::::::::::::.:.:..:::::::::::::::::::::::::::::.:::: gi|149 GLLLLYLSVGISIFSVVAYTVEREDDEGLATIPACWWWATVSMTTVGYGDVVPGTAAGKL 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 TASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYA ::::::::::::::::::::::::::::::::::::::::: :::: :::::::::::: gi|149 TASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCRFGDGTGEVPSVNLRDYYA 420 430 440 450 460 470 490 500 510 mKIAA1 HKVKSLMASLTNMSRSSPSELSLDDSLH .:::::::::..: ::::::::.::: gi|149 CRVKSLMASLTDVSGSSPSELSLSDSLD 480 490 500 >>gi|118087222|ref|XP_428021.2| PREDICTED: similar to po (447 aa) initn: 2503 init1: 2503 opt: 2504 Z-score: 3008.0 bits: 566.0 E(): 7.7e-159 Smith-Waterman score: 2504; 89.227% identity (95.785% similar) in 427 aa overlap (87-512:21-447) 60 70 80 90 100 110 mKIAA1 NVGGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDR-NPELFPY :: :. . . ..: .. ::::::: gi|118 MEGRGAGSRRGEVGEEKRKEREMEREMGEKESREKKEREREKGNPELFPY 10 20 30 40 50 120 130 140 150 160 170 mKIAA1 VLHFYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSD :::::.:::::: .:: ::::::::::::::::::::::::::::::.::.::::.:::: gi|118 VLHFYNTGKLHVRGELRVFSFSQEIEYWGINEFFIDSCCSYSYHGRKMEPDQEKWEEQSD 60 70 80 90 100 110 180 190 200 210 220 230 mKIAA1 QESTTSSFDEILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGS :::::::::::::::::::::: ::.::.::::::::::::::::::.::::::.::::: gi|118 QESTTSSFDEILAFYNDASKFDKQPFGNIRRQLWLALDNPGYSVLSRIFSVLSIVVVLGS 120 130 140 150 160 170 240 250 260 270 280 290 mKIAA1 IITMCLNSLPDFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNAL :.::::::: :::: ::.:.: ::::::::::::::::::::::::::::::::::..:: gi|118 IVTMCLNSLSDFQIIDSSGTPEEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFQHAL 180 190 200 210 220 230 300 310 320 330 340 350 mKIAA1 NLIDLMSIVPFYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGA ::::::::.::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|118 NLIDLMSILPFYITLIVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGA 240 250 260 270 280 290 360 370 380 390 400 410 mKIAA1 TLKYSYKEVGLLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDV ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 TLKYSYREVGLLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDV 300 310 320 330 340 350 420 430 440 450 460 470 mKIAA1 VPGTTAGKLTASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVP :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 VPGSTAGKLTASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVP 360 370 380 390 400 410 480 490 500 510 mKIAA1 SVNLRDYYAHKVKSLMASLTNMSRSSPSELSLDDSLH :::::::::.:::::::::::::::.::::::.:::: gi|118 SVNLRDYYAYKVKSLMASLTNMSRSTPSELSLNDSLH 420 430 440 512 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 22:26:12 2009 done: Thu Mar 12 22:33:20 2009 Total Scan time: 957.430 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]