Comparison of KIAA cDNA sequences between mouse and human (KIAA0089)

<<Original sequence data>>

mouse  mKIAA0089 (mfj52294)     length:   4335 bp, CDS:   180 -  1271
human   KIAA0089  (ha03662)     length:   4043 bp, CDS:     2 -  1237

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     24 -   228     100       46      31.5
  CDS:    229 -  1296     915      153      14.3
3'UTR:   1297 -  4291    1582      979      38.2

amino acid

  CDS:    229 -  1296     337       19      5.3
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
                                        A  V  A  L  G  A  *  A  G
mfj52294     1 .......................CAGCTGTGGCCCTAGGCGCCTAGGCAG 27
                                      |||||| |||||  ||||||  |   |
ha03662      1 CGAAGCGGGTCCTGCCCCGCTGTCAGCTGCGGCCCCCGGCGCCGGGCGGG 50
                E  A  G  P  A  P  L  S  A  A  A  P  G  A  G  R  G

            51 ----+----*----+----*----+----*----+----*----+----* 100
                 W  R  W  P  L  A  D  R  R  A  G  R  G  R  P  E  
mfj52294    28 GGTGGCGGTGGCCATTGGCGGACAGGAGGGCGGGGCGGGGTCGCCCGGAG 77
               |||||| | | ||||||||||| ||| |   ||||||||| ||||   ||
ha03662     51 GGTGGCCGCGACCATTGGCGGAGAGGCGAAAGGGGCGGGGCCGCCGCCAG 100
                 W  P  R  P  L  A  E  R  R  K  G  R  G  R  R  Q  

           101 ----+----*----+----*----+----*----+----*----+----* 150
               R  -     T  R  P  F  L  W  R  *  A  A  G  L  G  G 
mfj52294    78 CGCCT..ATACTAGGCCGTTCCTGTGGAGGTGAGCAGCCGGCCTGGGAGG 125
               |  ||     | |||| |  |  | ||||||| |||||||||| |||| |
ha03662    101 CCGCTGCGGGCAAGGCTGAACAGGCGGAGGTGGGCAGCCGGCCAGGGAAG 150
               P  L  R  A  R  L  N  R  R  R  W  A  A  G  Q  G  S 

           151 ----+----*----+----*----+----*----+----*----+----* 200
                T  V  C  V  A  A                                 
mfj52294   126 CACAGTGTGTGTTGCAGCGATCCGACTTGCAGCAGCGATCCGGCTTGGCC 175
               ||| ||    |  ||  |                                
ha03662    151 CACGGTCCAGGCGGCTAC................................ 168
                T  V  Q  A  A  T                                 

           201 ----+----*----+----*----+----*----+----*----+----* 250
                                           S  G  L  A  M  A  A  A
mfj52294   176 CTGAGAGGAAGGCTGTGTGCAGCAGCGATCCGGCTTGGCCATGGCAGCGG 225
                                          || ||||  ||||||||||||||
ha03662    169 ...........................ATTCGGCCCGGCCATGGCAGCGG 191
                                           F  G  P  A  M  A  A  A

           251 ----+----*----+----*----+----*----+----*----+----* 300
                 P  L  K  V  C  I  V  G  S  G  N  W  G  S  A  V  
mfj52294   226 CGCCTCTGAAAGTGTGCATCGTGGGCTCGGGGAACTGGGGATCAGCTGTT 275
               |||| ||||||||||||||||||||||||||||||||||| |||||||||
ha03662    192 CGCCCCTGAAAGTGTGCATCGTGGGCTCGGGGAACTGGGGTTCAGCTGTT 241
                 P  L  K  V  C  I  V  G  S  G  N  W  G  S  A  V  

           301 ----+----*----+----*----+----*----+----*----+----* 350
               A  K  I  I  G  S  N  V  K  T  L  Q  K  F  S  S  T 
mfj52294   276 GCAAAAATCATCGGCAGCAACGTGAAGACCCTGCAGAAATTCTCCTCCAC 325
               |||||||| || || |  ||||| ||||  || ||||||||  |||||||
ha03662    242 GCAAAAATAATTGGTAATAACGTCAAGAAACTTCAGAAATTTGCCTCCAC 291
               A  K  I  I  G  N  N  V  K  K  L  Q  K  F  A  S  T 

           351 ----+----*----+----*----+----*----+----*----+----* 400
                V  K  M  W  V  F  E  E  T  V  N  G  R  K  L  T  D
mfj52294   326 CGTCAAGATGTGGGTCTTCGAGGAGACCGTGAACGGGAGGAAGCTGACAG 375
                ||||||||||||||||| || || || ||||| || || || |||||||
ha03662    292 AGTCAAGATGTGGGTCTTTGAAGAAACAGTGAATGGCAGAAAACTGACAG 341
                V  K  M  W  V  F  E  E  T  V  N  G  R  K  L  T  D

           401 ----+----*----+----*----+----*----+----*----+----* 450
                 I  I  N  N  D  H  E  N  V  K  Y  L  P  G  H  K  
mfj52294   376 ACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAG 425
               |||| || || |||||||| ||||| || |||||||| || |||||||||
ha03662    342 ACATCATAAATAATGACCATGAAAATGTAAAATATCTTCCTGGACACAAG 391
                 I  I  N  N  D  H  E  N  V  K  Y  L  P  G  H  K  

           451 ----+----*----+----*----+----*----+----*----+----* 500
               L  P  E  N  V  V  A  V  P  N  L  S  E  A  V  Q  D 
mfj52294   426 CTGCCAGAGAATGTGGTCGCTGTCCCAAACCTCAGCGAAGCCGTGCAGGA 475
               |||||||| |||||||| ||  |  |||| || ||||| || ||||||||
ha03662    392 CTGCCAGAAAATGTGGTTGCCATGTCAAATCTTAGCGAGGCTGTGCAGGA 441
               L  P  E  N  V  V  A  M  S  N  L  S  E  A  V  Q  D 

           501 ----+----*----+----*----+----*----+----*----+----* 550
                A  D  L  L  V  F  V  I  P  H  Q  F  I  H  K  I  C
mfj52294   476 CGCGGACCTGCTGGTGTTCGTCATCCCTCACCAGTTCATCCACAAGATCT 525
                || |||||||||||||| ||||| || ||||||||||| ||||  ||||
ha03662    442 TGCAGACCTGCTGGTGTTTGTCATTCCCCACCAGTTCATTCACAGAATCT 491
                A  D  L  L  V  F  V  I  P  H  Q  F  I  H  R  I  C

           551 ----+----*----+----*----+----*----+----*----+----* 600
                 D  E  I  T  G  R  V  P  E  K  A  L  G  I  T  L  
mfj52294   526 GCGATGAGATCACGGGCAGGGTGCCCGAGAAGGCCCTGGGGATCACCCTC 575
               | ||||||||||| || || |||||| |||| || ||||| |||||||||
ha03662    492 GTGATGAGATCACTGGGAGAGTGCCCAAGAAAGCGCTGGGAATCACCCTC 541
                 D  E  I  T  G  R  V  P  K  K  A  L  G  I  T  L  

           601 ----+----*----+----*----+----*----+----*----+----* 650
               I  K  G  I  D  E  G  P  D  G  L  K  L  I  S  D  I 
mfj52294   576 ATCAAGGGCATAGATGAGGGCCCCGACGGGCTGAAGCTAATCTCCGACAT 625
               |||||||||||||| ||||||||||| |||||||| || || || |||||
ha03662    542 ATCAAGGGCATAGACGAGGGCCCCGAGGGGCTGAAACTCATTTCTGACAT 591
               I  K  G  I  D  E  G  P  E  G  L  K  L  I  S  D  I 

           651 ----+----*----+----*----+----*----+----*----+----* 700
                I  R  E  K  M  G  I  D  I  S  V  L  M  G  A  N  I
mfj52294   626 CATCCGAGAGAAGATGGGGATCGACATCAGTGTGCTGATGGGGGCCAACA 675
               |||||| ||||||||||| || |||||||||||||||||||| |||||||
ha03662    592 CATCCGTGAGAAGATGGGTATTGACATCAGTGTGCTGATGGGAGCCAACA 641
                I  R  E  K  M  G  I  D  I  S  V  L  M  G  A  N  I

           701 ----+----*----+----*----+----*----+----*----+----* 750
                 A  S  E  V  A  A  E  K  F  C  E  T  T  I  G  S  
mfj52294   676 TCGCCAGTGAGGTCGCTGCGGAGAAGTTCTGCGAGACCACCATTGGCAGC 725
               | |||| |||||| ||||| ||||||||||| ||||||||||| ||||||
ha03662    642 TTGCCAATGAGGTGGCTGCAGAGAAGTTCTGTGAGACCACCATCGGCAGC 691
                 A  N  E  V  A  A  E  K  F  C  E  T  T  I  G  S  

           751 ----+----*----+----*----+----*----+----*----+----* 800
               K  V  M  Q  N  G  L  L  F  K  E  L  L  Q  T  P  N 
mfj52294   726 AAAGTGATGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGACGCCCAA 775
               ||||| ||| |||||||||||||||||||||| || |||||||| || ||
ha03662    692 AAAGTAATGGAGAACGGCCTTCTCTTCAAAGAACTTCTGCAGACTCCAAA 741
               K  V  M  E  N  G  L  L  F  K  E  L  L  Q  T  P  N 

           801 ----+----*----+----*----+----*----+----*----+----* 850
                F  R  I  T  V  V  D  D  A  D  T  V  E  L  C  G  A
mfj52294   776 CTTCAGAATCACTGTGGTAGACGATGCAGACACCGTGGAGCTTTGCGGTG 825
                ||  |||| || ||||| || ||||||||||| || || || || ||||
ha03662    742 TTTTCGAATTACGGTGGTTGATGATGCAGACACTGTTGAACTCTGTGGTG 791
                F  R  I  T  V  V  D  D  A  D  T  V  E  L  C  G  A

           851 ----+----*----+----*----+----*----+----*----+----* 900
                 L  K  N  I  V  A  V  G  A  G  F  C  D  G  L  R  
mfj52294   826 CTCTTAAGAACATTGTTGCTGTGGGAGCTGGCTTCTGCGACGGCCTCCGC 875
               | ||||||||||| || |||||||||||||| ||||||||||||||||||
ha03662    792 CGCTTAAGAACATCGTAGCTGTGGGAGCTGGGTTCTGCGACGGCCTCCGC 841
                 L  K  N  I  V  A  V  G  A  G  F  C  D  G  L  R  

           901 ----+----*----+----*----+----*----+----*----+----* 950
               C  G  D  N  T  K  A  A  V  I  R  L  G  L  M  E  M 
mfj52294   876 TGTGGGGACAACACCAAGGCGGCCGTCATACGCCTGGGCCTCATGGAAAT 925
               ||||| ||||||||||| ||||||||||| |||||||| |||||||||||
ha03662    842 TGTGGAGACAACACCAAAGCGGCCGTCATCCGCCTGGGACTCATGGAAAT 891
               C  G  D  N  T  K  A  A  V  I  R  L  G  L  M  E  M 

           951 ----+----*----+----*----+----*----+----*----+----* 1000
                I  A  F  A  K  I  F  C  K  G  Q  V  S  T  A  T  F
mfj52294   926 GATCGCTTTCGCCAAGATCTTCTGTAAGGGCCAGGTGTCCACGGCCACCT 975
               ||| ||||| |||| ||||||||| || ||||| ||||| || |||||||
ha03662    892 GATTGCTTTTGCCAGGATCTTCTGCAAAGGCCAAGTGTCTACAGCCACCT 941
                I  A  F  A  R  I  F  C  K  G  Q  V  S  T  A  T  F

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
                 L  E  S  C  G  V  A  D  L  I  T  T  C  Y  G  G  
mfj52294   976 TCTTGGAGAGCTGCGGGGTGGCTGACCTCATCACCACCTGCTACGGAGGG 1025
               || | ||||||||||||||||| ||||| ||||||||||| |||||||||
ha03662    942 TCCTAGAGAGCTGCGGGGTGGCCGACCTGATCACCACCTGTTACGGAGGG 991
                 L  E  S  C  G  V  A  D  L  I  T  T  C  Y  G  G  

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
               R  N  R  R  V  A  E  A  F  A  R  T  G  K  T  I  E 
mfj52294  1026 CGGAACCGCAGGGTGGCAGAGGCCTTCGCCAGGACTGGGAAGACCATCGA 1075
               ||||||||||||||||| |||||||||||||| |||||||||||||| ||
ha03662    992 CGGAACCGCAGGGTGGCCGAGGCCTTCGCCAGAACTGGGAAGACCATTGA 1041
               R  N  R  R  V  A  E  A  F  A  R  T  G  K  T  I  E 

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
                E  L  E  K  E  L  L  N  G  Q  K  L  Q  G  P  Q  T
mfj52294  1076 AGAGCTGGAGAAGGAGCTGCTGAACGGGCAGAAGCTGCAGGGACCTCAGA 1125
               |||| ||||||||||| ||||||| ||||| ||||| || ||||| ||||
ha03662   1042 AGAGTTGGAGAAGGAGATGCTGAATGGGCAAAAGCTCCAAGGACCGCAGA 1091
                E  L  E  K  E  M  L  N  G  Q  K  L  Q  G  P  Q  T

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                 S  A  E  V  Y  R  I  L  R  Q  K  G  L  L  D  K  
mfj52294  1126 CCTCTGCGGAGGTGTACCGCATCCTCAGGCAGAAGGGGCTGCTGGACAAG 1175
               | ||||| || ||||||||||||||||  |||||||| || |||||||||
ha03662   1092 CTTCTGCTGAAGTGTACCGCATCCTCAAACAGAAGGGACTACTGGACAAG 1141
                 S  A  E  V  Y  R  I  L  K  Q  K  G  L  L  D  K  

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
               F  P  L  F  T  A  V  Y  Q  I  C  Y  E  G  R  P  V 
mfj52294  1176 TTTCCCCTCTTCACTGCAGTGTATCAGATCTGCTATGAAGGCAGGCCTGT 1225
               |||||  | || ||||||||||||||||||||||| ||| |||| || ||
ha03662   1142 TTTCCATTGTTTACTGCAGTGTATCAGATCTGCTACGAAAGCAGACCAGT 1191
               F  P  L  F  T  A  V  Y  Q  I  C  Y  E  S  R  P  V 

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
                T  Q  M  L  S  C  L  Q  S  H  P  E  H  I  *      
mfj52294  1226 CACGCAGATGCTGTCCTGCCTGCAGAGCCACCCAGAGCACATCTGAAG.G 1274
                    ||||| |||| || || |||||||| |||||||| |  | ||| |
ha03662   1192 TCAAGAGATGTTGTCTTGTCTTCAGAGCCATCCAGAGCATACATAAAGTG 1241
                Q  E  M  L  S  C  L  Q  S  H  P  E  H  T  *      

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mfj52294  1275 AGTCAGGCAGC.CATCAGGAACAGCTCTGC...............TGTGC 1308
               | ||| ||| |   |  ||   || |||||               | || 
ha03662   1242 AATCATGCAACGTGTTGGGGGAAGTTCTGCCTTTCTGATCAATCTTTTGG 1291

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mfj52294  1309 CCACTGGAGGAATCCGGGGCTTGGCAGTGGGATCCTGCTGAACTGTACT. 1357
                  |  | |||| || || |||||||     ||  || |  |||||| | 
ha03662   1292 GTTCACGTGGAAACCAGGACTTGGCA...ACATGATGTTTGACTGTAATC 1338

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mfj52294  1358 .....TCGAATACATCCAAATTGTTACAGCTTTGTCTCTGTGCCAGGAGA 1402
                     || |||  |   |||| |||||| || || | ||      ||||
ha03662   1339 TCATCACGGATATGTATGAATTTTTACAGGTTCGTTTTTGAATTGTGAGA 1388

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mfj52294  1403 AGCACTCCTCCACTGGCTAAGATGTGTCGGGTAACAACTACAGACACACA 1452
                |||    | || | || |||||||   ||| |  ||||  | |||||||
ha03662   1389 GGCA...GTTCATTAGCAAAGATGTACTGGGCAGTAACT..AAACACACA 1433

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mfj52294  1453 CGCACATGAGTGAATGTGTGTGAGAGTGTTTGTGTGTGTGTATGTGTGTG 1502
                ||| |   |||||||   ||                             
ha03662   1434 TGCAAACATGTGAATGGTGGT............................. 1454

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mfj52294  1503 TGTGTATATATACAAGTGTGCACCTTTCTCATTCTGTGAGTGTTTCTCTG 1552
                                       || |||||||||||  ||||||| ||
ha03662   1455 .....................TTATTCCTCATTCTGTGGATGTTTCTATG 1483

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mfj52294  1553 AACCCAAATCAGGTGTCTATTGATCA......CATTTTAAATTTCCCCTC 1596
               | || ||||  | ||||| ||  |||      | | | |||||||| | |
ha03662   1484 AGCCAAAATTTGATGTCTTTTTTTCAAAATTGCTTATGAAATTTCCACAC 1533

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mfj52294  1597 CAGGGCAGCTTGTGAAGTTAGAACTAACTCAGCTAAATGTTATGGCTGTG 1646
                |  | ||||| | |  || |||| | |||||| |||| || | | ||| 
ha03662   1534 AATCGTAGCTTATAAGATTGGAACGATCTCAGCCAAATATTTTAGGTGTA 1583

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj52294  1647 ACTCATTTATATGCAAGGGAAGGGAGGAACTGGGTTTTTTTCCCTCTGAA 1696
               | |||| | |||   || | |||       |     ||||||       |
ha03662   1584 ATTCATATGTATTTGAGTGGAGGATTTTTTTTCTCATTTTTCTAGTGTTA 1633

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj52294  1697 ACAGCTATCCAGCATTAA.....AAACGTCTGCATATATGTGTGTTTGAA 1741
               |    || ||||||||||      |  ||       |  |||||||  ||
ha03662   1634 AATTTTAACCAGCATTAACATGGTAGAGTGGAGGAGTGAGTGTGTTCAAA 1683

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj52294  1742 GACCACCA.....CACTTTTAAACAGCATCTCAGAGCCAGCAGCATGAAC 1786
               || || ||      |||||||||||  |||||| ||||||||  || |||
ha03662   1684 GATCAACATATTTAACTTTTAAACACTATCTCAAAGCCAGCATAATTAAC 1733

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj52294  1787 TCC........TGGGTTGTGGATTGACGGCTAAACAATCAGG.TGTTTTA 1827
               | |        |||| ||    |||     | ||||||||||   |||||
ha03662   1734 TACTTTGATTGTGGGCTGACCTTTGTTTTTTTAACAATCAGGCATTTTTA 1783

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj52294  1828 ATTAGATACTCCACAGACAGGTGTCTTCTTGA.TACAG.AGACCACATTC 1875
               |||||||| |||||  |    | ||  | | | | |||  | |  |||| 
ha03662   1784 ATTAGATAATCCACTCATGTATTTCCCCCTCACTGCAGTTGTCTGCATTT 1833

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj52294  1876 CTTGCCTCTTTCCTCTTCATTTGCTGCTAGAATGGGCTTTCATACAGACC 1925
                | |||||||| |||||| || | ||  |||||  || ||  |  || | 
ha03662   1834 TTAGCCTCTTTTCTCTTCGTTAGTTGTCAGAATATGCCTTTGTCAAGGCT 1883

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj52294  1926 CAG......CAAGGCAGAGGA.......GGAACATCCTTGCAGTGGCTGG 1962
               |||      |||| ||||  |       || |  | | ||| ||||||||
ha03662   1884 CAGAGGTAACAAGACAGAAAATTCATCTGGGATTTTCCTGCTGTGGCTGG 1933

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj52294  1963 ..................GGACACTT.CATTATGCTCATTGCTAGGTGGA 1993
                                  |||||||  || |||||    ||||| | | 
ha03662   1934 CACATTCTTCTGATTAACAGACACTTGTATGATGCTTTAGGCTAGTTAGT 1983

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj52294  1994 CTTTTTTTTTGCAGCTGTGTCTCTTCA....GGCTTGTGGAAGGAACCCT 2039
                  |||||| |||    | | |||| |      |   |  |  |     |
ha03662   1984 GCATTTTTTAGCAAACATTTATCTTAAACATCACAGATCCACTGGGGGGT 2033

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj52294  2040 CAAGGGGGCCACTGTCACTTCTCATGTAAGAAGCCATAGCTGTACCTGGT 2089
                 | ||||| ||||| | | ||| ||| ||| ||  |  ||   ||||||
ha03662   2034 GCAAGGGGCTACTGTTAGTCCTCTTGTTAGATGCAGTCACTCCTCCTGGT 2083

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj52294  2090 CACCTGGGGACATGG..........GGACATTCCTCCATCCCTCCAGGAT 2129
               ||||| | ||   ||          |||      | ||   |    |   
ha03662   2084 CACCTAGTGAGCAGGGACAGAGCCAGGAGTCAAGTGCAGTGCCAAGGTGC 2133

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj52294  2130 GGGACCTGCGAGGATGTCCCTGGGCCTCTCTGACCTGC.......TGTTT 2172
                 ||||  |   || ||| ||||||   | |||||| |       || ||
ha03662   2134 ATGACCCTCTGAGAAGTCACTGGGCTGATTTGACCTCCGACTCATTGGTT 2183

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj52294  2173 GTAGGAATGATGT.....GCCTTTCCTGAGGGC.CAGGAGGGCTACTTGC 2216
               ||   ||||   |     ||||||||||||| |  ||||||||| | |||
ha03662   2184 GTGTAAATGCCATGTGCAGCCTTTCCTGAGGCCATAGGAGGGCTTCCTGC 2233

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj52294  2217 CTTGGAGATTTGTG..TGGCAAAGAGTGGGAAAGTCACCACCCACGTGGT 2264
                   ||||| | ||   | ||     |    | ||  |   ||| | |  
ha03662   2234 AGCTGAGATCTATGCAGGCCATCCTCTCAACAGGTGCCACTCCAAGGGCG 2283

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj52294  2265 GTCCCCAGTCAGCAGGGGCATTTCACTCA.................GCAG 2297
               |||| | ||  ||||  ||||     |||                 | ||
ha03662   2284 GTCCTCGGT..GCAGCAGCATCAGCTTCACTTGTGGGGGGGTGGGGGAAG 2331

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj52294  2298 GATCCCACTGCCAAGCCCCAGATACCTGGTGTTCCTCCAGGAATCCAGTG 2347
               |  |   ||   ||   |  | | || |||    | |  |   ||   ||
ha03662   2332 GGGCGGTCTCAGAAATGCAGGTTCCCAGGTCCCACCCTGGACTTC...TG 2378

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj52294  2348 TTTCCACATGCCTTCTATGCATTTCGGATGCTCACTACAGCA.GAGAGCC 2396
                       || | ||| ||  |||| |||||| ||||||  | | || ||
ha03662   2379 AAGGGGTGTGGCATCTGTG..TTTCTGATGCTTACTACAATATGTGAACC 2426

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj52294  2397 ACTGCACTAGAGAATTTAC........AGCCTTTGCTGAACAATGCTCTA 2438
               ||| |  |||| ||| | |         |  ||     ||   || ||  
ha03662   2427 ACTACTTTAGAAAATCTGCTTTAACTTGGTATTCCTCTAATTGTGTTCCC 2476

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj52294  2439 TAAGAGACAAGTGTCCTGGAGTCTCCTGGCTAAGCCAGGTGGACCCTGGA 2488
               || || |  | |||||      |   ||  ||  |||||||  |||||||
ha03662   2477 TAGGAAATGACTGTCCCAAGAGCCAGTGATTATTCCAGGTGTTCCCTGGA 2526

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj52294  2489 ATGGCCAAGTAAGTTTGGCCATCCCAGCTGCCTGACTTTTCACACTTTCC 2538
               | || ||||| ||| |||  | | |       || || | |||   ||  
ha03662   2527 AAGGTCAAGTGAGTCTGGGAAACAC.....TATGTCTGTACACCTCTTGA 2571

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj52294  2539 TAGAGTGG..GGAGGGATCCTGGATGCTAGGAACCCAT.....AAAGCTA 2581
                 | || |   |   | |  |  ||    |||||||||      |  |||
ha03662   2572 AGGTGTCGAATGTATGTTTATACATCAGTGGAACCCATTTTTCTAGCCTA 2621

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj52294  2582 ATACGTCCCAAACACATTAGACT.ATGAGAGTCTTGTTTTTCTTAACTAG 2630
                 | ||||||||||||||| ||| | |||| | | ||           ||
ha03662   2622 GCAAGTCCCAAACACATTACACTGAAGAGATTTTGGT..........GAG 2661

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj52294  2631 AATATTAATTAAAATTTCTAGAGAATACTCCTATAGAGTGAGGTGACCCT 2680
                | | |   |  | |||  || ||| |||  | |||  | |||||||| |
ha03662   2662 GAAACTTGCTGGAGTTTTCAGGGAACACTGTTCTAGGCTTAGGTGACCTT 2711

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj52294  2681 CACTCTCCACAGGAATTCAGGATGACTAACTTCCTGTGAGAGTTCTATGT 2730
                      | || | |     ||    | ||| |||| ||||  |      
ha03662   2712 AGGATCACTCAAGTA.....GACCCTTCACTCCCTGCGAGAAAT...... 2750

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj52294  2731 AGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCTGAGT 2780
                   | || ||       |  |||  | || |||  ||||          
ha03662   2751 ....TAGGATGAATAACTACCTGTGGCATTGTTGGTTCTG.......... 2786

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj52294  2781 GGCCTGGGCTTTGCAGTTCTGGCCT......AACCCCTGAGAAAGCTTTC 2824
                        ||| |||||| |||||      || |  |||  ||||||| 
ha03662   2787 .....AACTTTTACAGTTCAGGCCTGCTGTGAATCTTTGATGAAGCTTTA 2831

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj52294  2825 AGGATGCAGGGTCAGGCACAGACAAGGGGATGTCGACCTCAGTGAAACGC 2874
               |||   ||  ||    ||          ||||||  | |   ||||||||
ha03662   2832 AGGTGACACTGTTGTACA.........AGATGTCAGCTTTGCTGAAACGC 2872

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj52294  2875 ACACTATATGGAGTGAGTGCTTTGGATGCTAGAATTAGAACACAAATGAT 2924
               ||| ||  |||| | ||||||||  ||  |||||||||||    | | | 
ha03662   2873 ACATTACCTGGAATAAGTGCTTT.AATTGTAGAATTAGAATGGGATTTAC 2921

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj52294  2925 TTTATCTTTATTTAAAAACCAGGCGTCCCACGGGGGTGGAAAGAGCACAC 2974
               | ||   || |  |  |    ||| ||  |      |  |   | |  ||
ha03662   2922 TGTACTGTTTTAAATGAGATTGGCTTCAGAATCCATTACAGTTACCTTAC 2971

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj52294  2975 GGAGGTCATTGTCC....................TGTGCTTTAGCCTATG 3004
                 ||  | |  | |                    |||  ||||     | 
ha03662   2972 ATAGCACTTGATACGTGTTAAATGAACATATGAATGTAATTTATATATTC 3021

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj52294  3005 AGAGTTTCCACTTCCCCTCCCTCCTCCTGGGTTTGGTTGCCCCCACCCTA 3054
                 ||  |  |  |  | |         ||||  ||  | || | |  | |
ha03662   3022 CTAGAATTTAAGTTACTTTGTGAGATTTGGGCCTG..TCCCTCAATGCCA 3069

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj52294  3055 CTCTA......CATCCCTTCTATAACTGAAAATGATTGTAAAATAAATTT 3098
                | ||      | |   ||||||| ||  |||||||| ||||||| ||||
ha03662   3070 GTTTAGGATTTCTTTTTTTCTATACCTTGAAATGATTATAAAATAGATTT 3119

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj52294  3099 TTATGAGAATTTTAAAAACTGTCCAAGAAGACTTTTTGGAGCATTATAAA 3148
               | ||| |||||||||||||| |     ||   ||||||||||||| ||||
ha03662   3120 TCATGGGAATTTTAAAAACTCTATCCAAAACATTTTTGGAGCATTTTAAA 3169

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj52294  3149 GTCCCACAC...........CTAAAACGCACAGCAGGCTGAATATTTCAG 3187
               | |||| ||           | ||| | ||||  |  ||  |  ||||||
ha03662   3170 GCCCCATACACAGAAGTATACGAAAGCACACAAAACACTCCAAGTTTCAG 3219

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj52294  3188 TTTTCTTAATGATGTCA..ATCAATTTTTTCTTGCCTCCT...AAGTCTT 3232
                  | |||  |    ||  | |    ||| |||| ||| |   || ||||
ha03662   3220 CAGTTTTAGCGCCACCATTAACCCACTTTGCTTGTCTCATGAAAAATCTT 3269

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj52294  3233 TTAAAAAACGAAACTCTGTACATATGTAACAAAGAGTTACTTTTTAAGAT 3282
               |         ||| | |||||| | |||||||| |||||||||  |||||
ha03662   3270 T......GTTAAAGTTTGTACACAGGTAACAAAAAGTTACTTTAAAAGAT 3313

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj52294  3283 ATCCAAAGGGCTGAGAGCT.ACCGTGGTGTCTACAAAGTAGCACAA.... 3327
               ||  |||||||||  |||| |  ||||||||||  |||||||| ||    
ha03662   3314 ATATAAAGGGCTGTAAGCTAATTGTGGTGTCTAGTAAGTAGCATAATGAG 3363

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj52294  3328 ...TGCAGAGTTG....TTGACGTGTTTTGC..ATCCTCGTGTACATTCA 3368
                  ||  ||||||    ||  ||||||||||  ||  || | | ||||||
ha03662   3364 ATGTGAGGAGTTGGAACTTTGCGTGTTTTGCGTATTTTCATCTGCATTCA 3413

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj52294  3369 CCCTCT..CTCTGGCCTTGTACTTCCG.CTTCTTCCTTCCCTAATGAATG 3415
                | |||  ||||||  |||||||   |  || || |||  | ||||    
ha03662   3414 GCTTCTTACTCTGGGTTTGTACTCGAGTGTTATTTCTTTACAAATG.... 3459

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj52294  3416 ACCTTACTTACTGACTGACATCCCCCTGAAGTCAGCTGA.TGTGCTT... 3461
                || |  | | |       | | | |||||||| ||||| ||||  |   
ha03662   3460 .CCCTTGTAATT.......ACCACTCTGAAGTCTGCTGACTGTGTCTCTT 3501

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj52294  3462 .............ATAACCCACCCAGGAGGGAAACAGGTAAATTT..CTT 3496
                            |||  |  | ||  | ||||| ||||||||||     
ha03662   3502 GAACATACTTAGGATATTCTGCACATTATGGAAAAAGGTAAATTTTAGAA 3551

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj52294  3497 GTTTGTGCTCTGAAGGCCAGAGGCATTGCTGTATGCGTTACCTGTTTTTG 3546
               |||| ||||||     |   ||  |||    ||||  |   |   || | 
ha03662   3552 GTTTCTGCTCTACTAACTGTAGATATT....TATGACTCTGCGAGTTATC 3597

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj52294  3547 TAACCTTGTAACCACCTGCTGATTGGTGTTTCT................. 3579
               ||   || ||||||||||  |     ||||  |                 
ha03662   3598 TATTTTTATAACCACCTGTGGTCCATTGTTCATTTTAATTCACATTTCTT 3647

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj52294  3580 ........TGGCGATAGGCTCAGAGACACCTAGATTAGAAACT....... 3614
                       |||  | |||    |||||||||||||||| | ||       
ha03662   3648 ATGAAGTATGGTAACAGGGAGGGAGACACCTAGATTAGCAGCTCAATTTG 3697

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj52294  3615 ............TCACCTGTGAATGT.AAAACTAAGCTCTTGCCTTGCTA 3651
                             | |||||||||| |||||||  || |||||||||||
ha03662   3698 TACTACTTCAGCCAATCTGTGAATGTAAAAACTACACTGTTGCCTTGCTA 3747

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj52294  3652 CTCTCCTCTCCACCGCAGTTTTGGACAAATCTTTG...GAAACCCACCCC 3698
                  ||| | |  |   | | | | |||||| | ||   |||| |||||| 
ha03662   3748 GGATCCACCCTCCTATAATATGGAACAAATATCTGAATGAAATCCACCCT 3797

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj52294  3699 TGG.GGCAGAGCCTGCCT..TCTGGTGTTTTCATAGCTGGCCTAAGA... 3742
                || | | ||| |   ||   || ||| |||   |  |  | |  ||   
ha03662   3798 AGGAGACGGAGTCAAACTAAACTTGTGGTTTTTCATTTAACTTTTGACTA 3847

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj52294  3743 .............................AGGGTGCTGTGGTGAGATCGC 3763
                                            |||||| |||| |||| |  |
ha03662   3848 CAGCATGGCCCCATGGCATCCACACCAAGAGGGTGTTGTGATGAGGTGCC 3897

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj52294  3764 AGTGTCTAAACAGAA...TTGTTTCTCTGCCACTTCTGACTGGCTGGCCT 3810
                ||||  |||  |||   | |||| ||  |   |||| |   ||| ||||
ha03662   3898 GGTGTGCAAAGGGAACTTTAGTTTTTCCACTGGTTCTTATCTGCTAGCCT 3947

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj52294  3811 CCTACTTCCATATGTACTGTATTTGTTTACGGACTGTAGGTGGGTGTATA 3860
                 ||| | ||| |||||| ||||||||||  |||||||||||| | ||||
ha03662   3948 TTTACATACATGTGTACTATATTTGTTTATAGACTGTAGGTGGATATATA 3997

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj52294  3861 GTGTAAAGGCTTGGTTTAATAAACACAACCTCTCAGACCTGTTCCATGGA 3910
                | |||| ||||| |||||||||||                         
ha03662   3998 ATTTAAAAGCTTGATTTAATAAACA......................... 4022

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj52294  3911 GCCTATTTTTCCTTTCTTGTTTTTATAAATTATTATTGGGGTGTGCTGTA 3960
                                   ||| |     ||   ||||||         
ha03662   4023 ....................TTTAACCCCCTAAACTTGGGG......... 4043

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj52294  3961 CAAAATTGTGTCTCTGTTCTTACCTACCCAAGGCATTCTTTGATTGGCTT 4010
                                                                 
ha03662   4044 .................................................. 4044

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj52294  4011 TAATAAAAAATCAGATGGCCGATTAGCTGGGCATGAAGTGGAAGGTGGGA 4060
                                                                 
ha03662   4044 .................................................. 4044

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj52294  4061 CTTCCTGGGAGGGAGAAAGGAACTCTGGAAAGAAAGAAGGAGGCACGAGG 4110
                                                                 
ha03662   4044 .................................................. 4044

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj52294  4111 GGAGACAAATATGATTTTGGTACTAGAAAGTAGCCACATGGCTGGATAGG 4160
                                                                 
ha03662   4044 .................................................. 4044

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj52294  4161 GCTAGGTGGCTGGGTTAACTTAGATGAGCTAGTTGAGAGTCTGCCCAGCT 4210
                                                                 
ha03662   4044 .................................................. 4044

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj52294  4211 AAGGCCTAAAGCTTTGAAATATTAAAAGTCTCTATGGTTATTTGGGGAAA 4260
                                                                 
ha03662   4044 .................................................. 4044

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj52294  4261 ATTGGATAAGGAATAATTGCCATTGTATTCATTTCCAGCATTAATTAATA 4310
                                                                 
ha03662   4044 .................................................. 4044

          4651 ----+----*----+----*----+ 4675
mfj52294  4311 AATACAGAATTTTAATATTTATATT 4335
                                        
ha03662   4044 ......................... 4044