# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj52041.fasta.nr -Q ../query/mKIAA4156.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4156, 368 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7908556 sequences Expectation_n fit: rho(ln(x))= 5.7686+/-0.000191; mu= 8.3672+/- 0.011 mean_var=91.1655+/-17.564, 0's: 27 Z-trim: 105 B-trim: 0 in 0/66 Lambda= 0.134326 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74758580|sp|Q6UXN9.1|WDR82_HUMAN RecName: Full= ( 313) 2112 418.9 7.3e-115 gi|55731766|emb|CAH92587.1| hypothetical protein [ ( 310) 2094 415.4 8.1e-114 gi|82233986|sp|Q5ZMV7.1|WDR82_CHICK RecName: Full= ( 313) 2082 413.1 4.1e-113 gi|126336648|ref|XP_001380358.1| PREDICTED: hypoth ( 313) 2079 412.5 6.1e-113 gi|21618713|gb|AAH31502.1| Wdr82 protein [Mus musc ( 306) 2071 410.9 1.8e-112 gi|82230176|sp|Q58E77.1|WD82B_XENLA WD repeat-cont ( 313) 2051 407.1 2.6e-111 gi|82236366|sp|Q6GL39.1|WDR82_XENTR RecName: Full= ( 313) 2048 406.5 3.9e-111 gi|82234105|sp|Q640J6.1|WD82A_XENLA WD repeat-cont ( 313) 2040 404.9 1.2e-110 gi|73985333|ref|XP_849745.1| PREDICTED: similar to ( 602) 2043 405.7 1.3e-110 gi|209732860|gb|ACI67299.1| WD repeat-containing p ( 313) 2026 402.2 7.6e-110 gi|82237223|sp|Q6NV31.1|WDR82_DANRE RecName: Full= ( 313) 2016 400.3 2.9e-109 gi|221220662|gb|ACM08992.1| WD repeat-containing p ( 315) 2012 399.5 5e-109 gi|28277563|gb|AAH44174.1| Wdr82 protein [Danio re ( 313) 2010 399.1 6.5e-109 gi|109030057|ref|XP_001084279.1| PREDICTED: simila ( 315) 1991 395.4 8.4e-108 gi|119600298|gb|EAW79892.1| hCG26824 [Homo sapiens ( 315) 1990 395.2 9.6e-108 gi|114588079|ref|XP_001138603.1| PREDICTED: hypoth ( 315) 1958 389.0 7.1e-106 gi|37682143|gb|AAQ97998.1| CG17293-PA-like protein ( 600) 1947 387.1 5.1e-105 gi|126325636|ref|XP_001369957.1| PREDICTED: hypoth ( 314) 1842 366.6 4.1e-99 gi|210104029|gb|EEA52057.1| hypothetical protein B ( 313) 1771 352.8 5.7e-95 gi|126342657|ref|XP_001374456.1| PREDICTED: hypoth ( 313) 1770 352.6 6.5e-95 gi|194221242|ref|XP_001492686.2| PREDICTED: simila ( 267) 1759 350.4 2.5e-94 gi|224065974|ref|XP_002191840.1| PREDICTED: WD rep ( 269) 1730 344.8 1.2e-92 gi|149589807|ref|XP_001514799.1| PREDICTED: hypoth ( 416) 1732 345.3 1.3e-92 gi|17512281|gb|AAH19115.1| Wdr82 protein [Mus musc ( 251) 1682 335.5 7.5e-90 gi|91084031|ref|XP_966556.1| PREDICTED: similar to ( 316) 1615 322.6 7.2e-86 gi|108883467|gb|EAT47692.1| COMPASS component SWD2 ( 314) 1612 322.0 1.1e-85 gi|167863510|gb|EDS26893.1| WD repeat protein 82 [ ( 314) 1610 321.6 1.4e-85 gi|193912958|gb|EDW11825.1| GI17354 [Drosophila mo ( 317) 1610 321.6 1.4e-85 gi|87248441|gb|ABD36273.1| WD40 protein [Bombyx mo ( 315) 1607 321.0 2.1e-85 gi|194163237|gb|EDW78138.1| GK24839 [Drosophila wi ( 317) 1607 321.0 2.1e-85 gi|215506665|gb|EEC16159.1| WD-repeat protein, put ( 318) 1607 321.0 2.1e-85 gi|190615639|gb|EDV31163.1| GF15223 [Drosophila an ( 317) 1604 320.4 3.2e-85 gi|194148009|gb|EDW63707.1| GJ16174 [Drosophila vi ( 317) 1604 320.4 3.2e-85 gi|7297395|gb|AAF52654.1| CG17293 [Drosophila mela ( 317) 1603 320.3 3.6e-85 gi|48102389|ref|XP_395346.1| PREDICTED: similar to ( 315) 1601 319.9 4.7e-85 gi|198430817|ref|XP_002130040.1| PREDICTED: simila ( 314) 1598 319.3 7.1e-85 gi|198137804|gb|EAL34505.2| GA14445 [Drosophila ps ( 317) 1597 319.1 8.1e-85 gi|55235879|gb|EAA14561.2| AGAP009700-PA [Anophele ( 314) 1591 317.9 1.8e-84 gi|212510446|gb|EEB13631.1| COMPASS component SWD2 ( 336) 1591 317.9 1.9e-84 gi|156550608|ref|XP_001604288.1| PREDICTED: simila ( 366) 1589 317.6 2.7e-84 gi|156219655|gb|EDO40534.1| predicted protein [Nem ( 314) 1519 304.0 2.9e-80 gi|193594316|ref|XP_001949091.1| PREDICTED: simila ( 322) 1485 297.4 2.8e-78 gi|210125135|gb|EEA72828.1| hypothetical protein B ( 276) 1473 295.0 1.3e-77 gi|47229672|emb|CAG06868.1| unnamed protein produc ( 317) 1467 293.9 3.1e-77 gi|190588950|gb|EDV28972.1| hypothetical protein T ( 318) 1407 282.3 9.9e-74 gi|221103907|ref|XP_002167511.1| PREDICTED: simila ( 319) 1396 280.1 4.3e-73 gi|149018691|gb|EDL77332.1| rCG25772, isoform CRA_ ( 199) 1367 274.4 1.5e-71 gi|56755972|gb|AAW26164.1| SJCHGC01023 protein [Sc ( 320) 1349 271.0 2.4e-70 gi|62079652|gb|AAX61172.1| unknown [Oreochromis mo ( 199) 1279 257.3 2e-66 gi|158591213|gb|EDP29826.1| Hypothetical 37.1 kDa ( 325) 1259 253.6 4.3e-65 >>gi|74758580|sp|Q6UXN9.1|WDR82_HUMAN RecName: Full=WD r (313 aa) initn: 2112 init1: 2112 opt: 2112 Z-score: 2218.5 bits: 418.9 E(): 7.3e-115 Smith-Waterman score: 2112; 100.000% identity (100.000% similar) in 313 aa overlap (56-368:1-313) 30 40 50 60 70 80 mKIAA4 GPEQPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFS :::::::::::::::::::::::::::::: gi|747 MKLTDSVLRSFRVAKVFRENSDKINCFDFS 10 20 30 90 100 110 120 130 140 mKIAA4 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES 220 230 240 250 260 270 330 340 350 360 mKIAA4 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD ::::::::::::::::::::::::::::::::::::::::::: gi|747 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 280 290 300 310 >>gi|55731766|emb|CAH92587.1| hypothetical protein [Pong (310 aa) initn: 2094 init1: 2094 opt: 2094 Z-score: 2199.7 bits: 415.4 E(): 8.1e-114 Smith-Waterman score: 2094; 100.000% identity (100.000% similar) in 310 aa overlap (59-368:1-310) 30 40 50 60 70 80 mKIAA4 QPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFSPNG :::::::::::::::::::::::::::::: gi|557 TDSVLRSFRVAKVFRENSDKINCFDFSPNG 10 20 30 90 100 110 120 130 140 mKIAA4 ETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 ETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLS 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 LHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 NGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 NGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIK 220 230 240 250 260 270 330 340 350 360 mKIAA4 VAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD :::::::::::::::::::::::::::::::::::::::: gi|557 VAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 280 290 300 310 >>gi|82233986|sp|Q5ZMV7.1|WDR82_CHICK RecName: Full=WD r (313 aa) initn: 2082 init1: 2082 opt: 2082 Z-score: 2187.1 bits: 413.1 E(): 4.1e-113 Smith-Waterman score: 2082; 97.764% identity (99.681% similar) in 313 aa overlap (56-368:1-313) 30 40 50 60 70 80 mKIAA4 GPEQPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFS :::::.:::::::::::::::::::::::: gi|822 MKLTDNVLRSFRVAKVFRENSDKINCFDFS 10 20 30 90 100 110 120 130 140 mKIAA4 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|822 YLSLHDNKYIRYFPGHTKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES :::::.::::::::::.:.:::::: :::::::::::::::::::::::::::::::::: gi|822 ISTNGGFIRLIDAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES 220 230 240 250 260 270 330 340 350 360 mKIAA4 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD :.::::::::::::::::::::::::::::::::::::::::: gi|822 GMKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 280 290 300 310 >>gi|126336648|ref|XP_001380358.1| PREDICTED: hypothetic (313 aa) initn: 2079 init1: 2079 opt: 2079 Z-score: 2183.9 bits: 412.5 E(): 6.1e-113 Smith-Waterman score: 2079; 97.764% identity (99.361% similar) in 313 aa overlap (56-368:1-313) 30 40 50 60 70 80 mKIAA4 GPEQPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFS ::::: :::::::::::::::::::::::: gi|126 MKLTDIVLRSFRVAKVFRENSDKINCFDFS 10 20 30 90 100 110 120 130 140 mKIAA4 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK ::::::::::::::::.::::::::::.:::::::::::::::::::::::::::::::: gi|126 YLSLHDNKYIRYFPGHNKRVVALSMSPIDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|126 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRNCEWTGLKFSNDGKLIL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES ::::::::::::::::.:::::::: ::::::::::::::::::::::.::::::::::: gi|126 ISTNGSFIRLIDAFKGAVMHTFGGYNNSKAVTLEASFTPDSQFIMIGSDDGKIHVWNGES 220 230 240 250 260 270 330 340 350 360 mKIAA4 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD ::::::::::::::::::::::::::::::::::::::::::: gi|126 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 280 290 300 310 >>gi|21618713|gb|AAH31502.1| Wdr82 protein [Mus musculus (306 aa) initn: 2071 init1: 2071 opt: 2071 Z-score: 2175.7 bits: 410.9 E(): 1.8e-112 Smith-Waterman score: 2071; 100.000% identity (100.000% similar) in 306 aa overlap (63-368:1-306) 40 50 60 70 80 90 mKIAA4 SLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVI :::::::::::::::::::::::::::::: gi|216 LRSFRVAKVFRENSDKINCFDFSPNGETVI 10 20 30 100 110 120 130 140 150 mKIAA4 SSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 SSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDN 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA4 KYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 KYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDP 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA4 EGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 EGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSF 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA4 IRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 IRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVL 220 230 240 250 260 270 340 350 360 mKIAA4 DGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD :::::::::::::::::::::::::::::::::::: gi|216 DGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 280 290 300 >>gi|82230176|sp|Q58E77.1|WD82B_XENLA WD repeat-containi (313 aa) initn: 2051 init1: 2051 opt: 2051 Z-score: 2154.6 bits: 407.1 E(): 2.6e-111 Smith-Waterman score: 2051; 95.847% identity (99.361% similar) in 313 aa overlap (56-368:1-313) 30 40 50 60 70 80 mKIAA4 GPEQPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFS :::::.:::::::::::::::::::::::: gi|822 MKLTDNVLRSFRVAKVFRENSDKINCFDFS 10 20 30 90 100 110 120 130 140 mKIAA4 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 PTGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|822 YLSLHDNKYIRYFPGHSKRVVSLSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL :::::::::::::::.::::::::::::::::::::::::::::::::.::::::::::: gi|822 PVCSFDPEGLIFAAGINSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTALKFSNDGKLIL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES .::::.:.::.:::::.:::::::: ::::::::::::::::::::::::::::::: :: gi|822 LSTNGGFLRLVDAFKGAVMHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNCES 220 230 240 250 260 270 330 340 350 360 mKIAA4 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD :.::::::::::::::::::::::::::::::::::::::::: gi|822 GMKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 280 290 300 310 >>gi|82236366|sp|Q6GL39.1|WDR82_XENTR RecName: Full=WD r (313 aa) initn: 2048 init1: 2048 opt: 2048 Z-score: 2151.5 bits: 406.5 E(): 3.9e-111 Smith-Waterman score: 2048; 95.847% identity (99.361% similar) in 313 aa overlap (56-368:1-313) 30 40 50 60 70 80 mKIAA4 GPEQPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFS :::::.:::::::::::::::::::::::: gi|822 MKLTDNVLRSFRVAKVFRENSDKINCFDFS 10 20 30 90 100 110 120 130 140 mKIAA4 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 PTGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|822 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTALKFSNDGKLIL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES .::::.:.::.:::::.:::::::: :::::::::.::::::::::::::::::::: :: gi|822 MSTNGGFLRLVDAFKGAVMHTFGGYNNSKAVTLEATFTPDSQFIMIGSEDGKIHVWNCES 220 230 240 250 260 270 330 340 350 360 mKIAA4 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD :.:::::::::::::::::::::::::.::::::::::::::: gi|822 GMKVAVLDGKHTGPITCLQFNPKFMTFTSACSNMAFWLPTIDD 280 290 300 310 >>gi|82234105|sp|Q640J6.1|WD82A_XENLA WD repeat-containi (313 aa) initn: 2040 init1: 2040 opt: 2040 Z-score: 2143.1 bits: 404.9 E(): 1.2e-110 Smith-Waterman score: 2040; 95.847% identity (99.361% similar) in 313 aa overlap (56-368:1-313) 30 40 50 60 70 80 mKIAA4 GPEQPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFS :::::.:::::::::::::::::::::::: gi|822 MKLTDGVLRSFRVAKVFRENSDKINCFDFS 10 20 30 90 100 110 120 130 140 mKIAA4 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 PTGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|822 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISASLDKTIRLWDLRSPNCQGLMHLQGK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL ::::::::::::::::::::::::::::::::::::::::::::::::.::::.:::::: gi|822 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTSLKFSQDGKLIL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES .::::.:.::.:::::.:::::::: ::::::::::::::::::::::::::::::: :: gi|822 MSTNGGFLRLVDAFKGAVMHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNCES 220 230 240 250 260 270 330 340 350 360 mKIAA4 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD :.::::::::::::::::::::::::::::::::::::::::: gi|822 GMKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 280 290 300 310 >>gi|73985333|ref|XP_849745.1| PREDICTED: similar to twi (602 aa) initn: 2043 init1: 2043 opt: 2043 Z-score: 2142.3 bits: 405.7 E(): 1.3e-110 Smith-Waterman score: 2043; 100.000% identity (100.000% similar) in 304 aa overlap (56-359:1-304) 30 40 50 60 70 80 mKIAA4 GPEQPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFS :::::::::::::::::::::::::::::: gi|739 MKLTDSVLRSFRVAKVFRENSDKINCFDFS 10 20 30 90 100 110 120 130 140 mKIAA4 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES 220 230 240 250 260 270 330 340 350 360 mKIAA4 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD :::::::::::::::::::::::::::::::::: gi|739 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMLVLGASRELAGCWDQDYDRTVLPLLD 280 290 300 310 320 330 gi|739 AQEPCYLLYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELF 340 350 360 370 380 390 >>gi|209732860|gb|ACI67299.1| WD repeat-containing prote (313 aa) initn: 2026 init1: 2026 opt: 2026 Z-score: 2128.4 bits: 402.2 E(): 7.6e-110 Smith-Waterman score: 2026; 93.610% identity (99.042% similar) in 313 aa overlap (56-368:1-313) 30 40 50 60 70 80 mKIAA4 GPEQPARSLASRPRPGPAPPLPSAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFS :::::.:::::::::::::::::::::::: gi|209 MKLTDNVLRSFRVAKVFRENSDKINCFDFS 10 20 30 90 100 110 120 130 140 mKIAA4 PNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR ::::.::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|209 SNGETIISSSDDDSLVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIR 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 YLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK ::::::::::::::::.:::..:::::::::::::::::::::::::::::::::::::: gi|209 YLSLHDNKYIRYFPGHNKRVTSLSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLIL ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|209 PVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKLQYDRTCEWTGLKFSNDGKLIL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 ISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGES .::::. .::.:::::.:::.:::: ::::::::::::::::::::::::::.::::.:: gi|209 VSTNGGALRLLDAFKGAVMHSFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKVHVWNAES 220 230 240 250 260 270 330 340 350 360 mKIAA4 GIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD :.::::::::::::.:::::::::::::::::::::::::::: gi|209 GMKVAVLDGKHTGPVTCLQFNPKFMTFASACSNMAFWLPTIDD 280 290 300 310 368 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 20:20:49 2009 done: Tue Mar 17 20:26:58 2009 Total Scan time: 843.770 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]