FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4168.ptfa, 887 aa vs ./tmplib.26680 library 1768130 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.4145+/-0.00722; mu= 2.3958+/- 0.480 mean_var=310.4264+/-74.091, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.0728 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0990 ( 821 res) mpg00916 ( 821) 3523 384 3.7e-107 mKIAA1402 ( 804 res) mbh03967 ( 804) 442 61 9.3e-10 mFLJ00201 ( 640 res) mpm06260 ( 640) 227 38 0.0051 >>mKIAA0990 ( 821 res) mpg00916 (821 aa) initn: 3626 init1: 2072 opt: 3523 Z-score: 2016.1 bits: 384.1 E(): 3.7e-107 Smith-Waterman score: 3542; 61.889% identity (69.476% ungapped) in 879 aa overlap (2-877:20-805) 10 20 30 40 mKIAA4 AATMAVRSRRPWVSVALGLVLGFTAASWLIAPRVAELSEKRR : ::.:.:: :.:. :::::::. :: :. ::..:: :: mKIAA0 GRAEPAAGTAGQRPGGRRGAGMAARGRRAWLSMLLGLVLGFVLASRLVLPRASEL--KR- 10 20 30 40 50 50 60 70 80 90 100 mKIAA4 RGSSLCSYYGRSATGPRADAQQLLPQPQSRPRLEQSPPPASHELPGPQQPEAAPGGPSFR .::: :: :: :: : . ::: mKIAA0 -------------VGPR-----------RRP----SPEGCR---PG--QEASQPGGA--- 60 70 80 110 120 130 140 150 160 mKIAA4 SSPWQQPAPLPQRRRGHTPEGATALPGAPAAKGEPEEEDGGAADPRKGGRPGSSHNGSGD :: . .:: : . ::.: :.... mKIAA0 --------------RGDA-RGAQLWPQGSAAEGVPRDRN--------------------- 90 100 170 180 190 200 210 220 mKIAA4 GGAAAPTSGPGDFLYVGVMTAQKYLGSRALAAQRTWARFIPGRVEFFSSQQSPSAALGQP ::.:::::::::: .::.:: :::.. :::.::::::. : .. mKIAA0 ------------FLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSI---- 110 120 130 140 230 240 250 260 270 280 mKIAA4 PPPLPVIALPGVDDSYPPQKKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRS :.::. : :::::::::::::::.::::::::::::::::::::::::::.:: :::: mKIAA0 --PIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLESFLRS 150 160 170 180 190 200 290 300 310 320 330 340 mKIAA4 LNSSKPLYLGQTGLGNTEELGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECLREMY ::::.::.:::::::.:::.:::.:::::::::::::.:.::::::::.::::.:::::: mKIAA0 LNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVILSREVLRRMAPHIGKCLREMY 210 220 230 240 250 260 350 360 370 380 390 400 mKIAA4 TTHEDVEVGRCVRRFGGTQCVWSYEMQQLFHENYEHNRKGYIQDLHNSKIHAAITLHPNK :::::::::::::::.:.::::::::::::.::::.:.::::.:::.:::: :::::::: mKIAA0 TTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHSSKIHRAITLHPNK 270 280 290 300 310 320 410 420 430 440 450 460 mKIAA4 RPAYQYRLHNYMLSRKISELRYRTIQLHRESALMSKLSNSEVSKEDQQLGRTPSFNHFQP : ::::::.:::::::.:::.:::::::: .:::: :..:..::: ::: ::: .:: mKIAA0 NPPYQYRLHSYMLSRKIAELRHRTIQLHREIVLMSKYSSTEIQKEDLQLGIPPSFMRFQA 330 340 350 360 370 380 470 480 490 500 510 520 mKIAA4 RERNEVMEWEFLTGKLLYSAAENQPPRQSINSILRSALDDTVLQVMEMINENAKSRGRLI :.:.:..:::::::: ::::...::::....: : :::: :.::::::: :::.:::.: mKIAA0 RQREEILEWEFLTGKYLYSATDGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRII 390 400 410 420 430 440 530 540 550 560 570 580 mKIAA4 DFKEIQYGYRRVDPMHGVEYILDLLLLYKRHKGRKLTVPVRRHAYLQQPFSKPFFREVEE ::::::::::::.::.:.:::::::::::.:::.:.:::::::::::: ::: : : :: mKIAA0 DFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKMQFVEHEE 450 460 470 480 490 500 590 600 610 620 630 mKIAA4 LDVNRLVESINSGTQSFSVISNSLKILSSLQEAKDIGGH---NEKKVHILVPLVGRYDIF ::...:.. ::. . :.: .::::: : ..: . : .:::..::.:: ::.:.: mKIAA0 LDAQELADRINQDSGSLSFLSNSLKKLVAFQLPGSKTEHKEPKEKKINILIPLSGRFDMF 510 520 530 540 550 560 640 650 660 670 680 690 mKIAA4 LRFMENFESTCLIPKQNVKLVIILFSRDAGQESIKHIELIQEYQSRYPSAEMMLIPMKGE .::: :::.:::::. ::::::.::. :.. .. :..::...:. .::.:.:...:..: mKIAA0 VRFMGNFEKTCLIPNLNVKLVILLFNSDSNPDKAKQVELMRDYRVKYPKADMQVLPVSGG 570 580 590 600 610 620 700 710 720 730 740 750 mKIAA4 FSRGLGLEMASSQFDNDTLLLFCDVDLIFRGDFLQRCRDNTVQGQQVYYPIIFSQYDPKV :::.:.::..::::.:..::.::::::.: ..:::::: ::: :::.:.::::::::::. mKIAA0 FSRALALEVGSSQFNNESLLFFCDVDLVFTAEFLQRCRANTVLGQQIYFPIIFSQYDPKI 630 640 650 660 670 680 760 770 780 790 800 810 mKIAA4 THMRNPPTEGDFVFSKETGFWRDYGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKV .. . :... :.:...:::::.::.:::::::.::. .::::.::::::::::::.::: mKIAA0 VYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKV 690 700 710 720 730 740 820 830 840 850 860 870 mKIAA4 ILSGLRPFRSQEVGVVHIFHPVHCDPNLDPKQYKMCLGSKASTFASTMQLAELWLEKHLG . .::. ::::::::::: ::: :::::::::::::::::::::.::.::::.::::. mKIAA0 VQAGLKTFRSQEVGVVHIHHPVVCDPNLDPKQYKMCLGSKASTFGSTQQLAEMWLEKNDP 750 760 770 780 790 800 880 mKIAA4 VRDNRTLS mKIAA0 SYSKGGSHGSARTA 810 820 >>mKIAA1402 ( 804 res) mbh03967 (804 aa) initn: 488 init1: 147 opt: 442 Z-score: 267.6 bits: 60.5 E(): 9.3e-10 Smith-Waterman score: 709; 25.159% identity (28.947% ungapped) in 787 aa overlap (124-876:81-798) 100 110 120 130 140 mKIAA4 AAPGGPSFRSSPWQQPAPLPQRRRGHTPEGATALPGAPAAKGEPEEEDGGAAD--PR--K :.. ::.: . : : : :: mKIAA1 PLILGLSLGCSLSLLRVSWIQGEGEDPCVEAVGKPGGPQNPDSKNGLDQGDEDFRPRIVP 60 70 80 90 100 110 150 160 170 180 190 200 mKIAA4 GGR-PGSSHNGSGDGGAAAPTSGPGDFLYVGVMTAQKYLGSRALAAQRTWARFIPGRVEF : :.. .. : . : :.:.:.. :.. :.:..:: :. .: :. . mKIAA1 YYRDPNKPYKKVLRTRYIQTELGSRERLLVAVLTSRATLSTLAVAVNRTVAHHFP-RLLY 120 130 140 150 160 210 220 230 240 250 260 mKIAA4 FSSQQSPSAALGQPPPPLPVIALPGVDDSYPPQKKSFMMIKYMHDHYLDKYEWFMRADDD :..:.. : : . :.. : : : : . ...: :. :.::. .:: mKIAA1 FTGQRGARA-----PAGMQVVS-HG--DERPAWLMSETL-RHLHTHFGADYDWFFIMQDD 170 180 190 200 210 220 270 280 290 300 310 320 mKIAA4 VYIKGDKLEEFLRSLNSSKPLYLGQTGLGNTEELGKLGLEPGENFCMGGPGMIFSREVLR .:... .: . :. .. ::::.. ::. .: .: :: :...:: .: mKIAA1 TYVQAPRLAALAGHLSINQDLYLGHA-----EEF--IGTGEQARYCHGGFGYLLSRSLLL 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RMVPHIGECLREMYTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFHENYEHNRKGYIQDLH :. ::. : .. ... : .:::. : :: ... :: ....: .. . . mKIAA1 RLRPHLDGCRGDILSARPDEWLGRCLIDTLGIGCVSQHQGQQ--YRSFELAKNRDPEKEE 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 NSKIHAAITLHPNKRPAYQYRLHNYM----LSRKISELRYRTIQLHRESALMSKLSNSEV . . .:...:: . . .::::. . : : ::.. :. :. .... ... . mKIAA1 SPAFLSAFAVHPVPEGTLMYRLHKRFSALELERAYSEIEQLQAQI-RNLTVLTPEGEAGL 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 SKEDQQLGRTPSFNHFQPRERNEVMEWEFLTGKLLYSAAENQPPRQSINSILRSALDDTV : .: :. : :. : ::. :...: . .. :.. : . ... :. . :.: mKIAA1 S---WPVG-LPA--PFTPHSRFEVLGWDYFTEQHTFACADGAP-KCPLQGASRADVGDAV 400 410 420 430 440 510 520 530 540 550 560 mKIAA4 LQVMEMINENAKSRGRLIDFKEIQYGYRRVDPMHGVEYILDLLLLYKRHKGRKLTVPVRR ..:..:. . : :. ... :::: :: .:.:: ::::: ..:.. .. : mKIAA1 DTALEQLNRRYQPRLRFRK-QRLLNGYRRFDPARGMEYTLDLLLEAVTQRGHRRSLA--R 450 460 470 480 490 500 570 580 590 600 610 620 mKIAA4 HAYLQQPFSKPFFREVEELDVNRLVESINSGTQSFSVISNSLKILSSLQEAKDIGGHNEK .. : .:.:. :: : . ..:. mKIAA1 RVSLLRPLSR-----VEILPMPYVTEAT-------------------------------- 510 520 630 640 650 660 670 mKIAA4 KVHILVPL-VGRYDIFLRFMENFESTCLIPKQNVKLVIILF--SRDA--GQESIKHIELI .:....:: :.. : :.: : .. : :.... :...: :.. : . . .. mKIAA1 RVQLVLPLLVAEAPAALAFLEAFAASVLEPREHALLTLLLVYGPREGRGGPDPFLGVKAA 530 540 550 560 570 580 680 690 700 710 720 730 mKIAA4 Q-EYQSRYPSAEMMLIPMKGEFSRGLGL-EMASSQFDNDTLLLFCDVDLIFRGDFLQRCR : . :::.:.. . ...: . : .. :.. :::... : .. :.::: mKIAA1 AAELERRYPGARLAWLAVRAEAPSQVRLMDVISKKHPVDTLFFLTTVWTRPGSEVLNRCR 590 600 610 620 630 640 740 750 760 770 780 mKIAA4 DNTVQGQQVYYPIIFSQYDPKVTHMR--------NPPTEG-DFVFSKETGFWRDYGYGIT :...: :...:. :....: .. .: .::. : : . .: : . mKIAA1 MNAISGWQAFFPVHFQEFNPALSPQRSPPGVPGADPPSPGVDPSRGAPVGGRFDRQASAE 650 660 670 680 690 700 790 800 810 820 830 mKIAA4 -CIYKSDLLGA--------GGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQEVGVVHIFH :.:..: :.: .: . ::: .:.. . .:::. ::. : :.:. : mKIAA1 GCFYNADYLAARARLAGELAGQEEEEALEGLEVMDVFLR--FSGLHLFRAVEPGLVQKFS 710 720 730 740 750 760 840 850 860 870 880 mKIAA4 PVHCDPNLDPKQYKMCLGSKASTFASTMQLAELWLEKHLGVRDNRTLS :.: :. . :. : :. ... ::: .:.. mKIAA1 LRDCSPRLSEELYHRCRLSNLEGLGARTQLAMALFEQEQANST 770 780 790 800 >>mFLJ00201 ( 640 res) mpm06260 (640 aa) initn: 163 init1: 132 opt: 227 Z-score: 146.6 bits: 37.8 E(): 0.0051 Smith-Waterman score: 227; 31.606% identity (36.970% ungapped) in 193 aa overlap (53-233:80-256) 30 40 50 60 70 80 mKIAA4 FTAASWLIAPRVAELSEKRRRGSSLCSYYGRSATGPRADAQQLLPQPQSRPRLEQSPPPA :. : :.: : : : . : : : :. mFLJ00 PAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGD--QGLRGPPGPPGL---PGPS 50 60 70 80 90 100 90 100 110 120 130 mKIAA4 SHELPGPQQPEAAPGGPSFRSSPWQQPAPLPQRRRGHTPE---GATALPGAPAAKGEPEE . .:: ..::: :.::. : : : :. :: . : .:::::. : : mFLJ00 GITVPGKPGAQGAPGPPGFRGEPGPQGEPGPRGDRGLKGDNGVGQPGLPGAPGQAGAPGP 110 120 130 140 150 160 140 150 160 170 180 190 mKIAA4 EDGGAADPRKGGRPGSSH--NGSGDGGAAAPTSGPGDFLYVGVMTAQKYLGSRALAAQRT : : :.:: . .. :: : ..: . ::. :.. . : ... mFLJ00 P--GLPGPAGLGKPGLDGIPGAPGDKGDSGPPGVPGSRGEPGAVGPKGPPGVDGVGIPG- 170 180 190 200 210 220 200 210 220 230 240 250 mKIAA4 WARFIPGRVEFFSSQQSPSAALGQP----PPPL--PV-IALPGVDDSYPPQKKSFMMIKY : .:: :.: .: :.: :: : :: ..:: mFLJ00 -AAGVPG-------PQGPVGAKGEPGLRGPPGLIGPVGYGMPGKPGPKGDRGPVGAPGLL 230 240 250 260 270 260 270 280 290 300 310 mKIAA4 MHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTGLGNTEELGKLGLEPG mFLJ00 GDRGEPGEDGKPGEQGPQGLGGPPGLPGSAGLPGRRGPPGSKGEVGPGGPPGVPGIRGDQ 280 290 300 310 320 330 887 residues in 1 query sequences 1768130 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:03:56 2006 done: Mon Mar 27 11:03:58 2006 Scan time: 0.970 Display time: 0.150 Function used was FASTA [version 3.4t11 Apr 17, 2002]