# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj48069.fasta.nr -Q ../query/mKIAA4229.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4229, 450 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7893814 sequences Expectation_n fit: rho(ln(x))= 5.2161+/-0.000185; mu= 9.4137+/- 0.010 mean_var=79.9699+/-15.320, 0's: 40 Z-trim: 235 B-trim: 0 in 0/66 Lambda= 0.143420 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26345314|dbj|BAC36308.1| unnamed protein produc ( 439) 3022 635.2 9.6e-180 gi|149028518|gb|EDL83890.1| rCG55970 [Rattus norve ( 446) 2912 612.4 6.9e-173 gi|5640017|gb|AAD45929.1|AF167320_1 zinc finger pr ( 402) 2700 568.5 1e-159 gi|194218814|ref|XP_001915564.1| PREDICTED: zinc f ( 447) 2594 546.6 4.4e-153 gi|55629028|ref|XP_519246.1| PREDICTED: zinc finge ( 446) 2562 540.0 4.3e-151 gi|46577682|sp|P17036.3|ZNF3_HUMAN RecName: Full=Z ( 446) 2562 540.0 4.3e-151 gi|86823997|gb|AAI05477.1| Zinc finger protein 3 [ ( 447) 2555 538.6 1.2e-150 gi|50949598|emb|CAH10562.1| hypothetical protein [ ( 446) 2551 537.7 2.1e-150 gi|30582675|gb|AAP35564.1| zinc finger protein 3 ( ( 410) 2412 509.0 9e-142 gi|30584085|gb|AAP36291.1| Homo sapiens zinc finge ( 411) 2412 509.0 9e-142 gi|189067925|dbj|BAG37863.1| unnamed protein produ ( 410) 2407 507.9 1.8e-141 gi|109066104|ref|XP_001112671.1| PREDICTED: simila ( 610) 2356 497.5 3.7e-138 gi|193787250|dbj|BAG52456.1| unnamed protein produ ( 429) 2332 492.4 8.9e-137 gi|119597013|gb|EAW76607.1| zinc finger protein 3 ( 392) 1951 413.6 4.5e-113 gi|119597010|gb|EAW76604.1| zinc finger protein 3 ( 343) 1920 407.1 3.5e-111 gi|51094606|gb|EAL23858.1| zinc finger protein 3 ( ( 387) 1910 405.1 1.6e-110 gi|7020166|dbj|BAA91019.1| unnamed protein product ( 387) 1908 404.7 2.1e-110 gi|119597009|gb|EAW76603.1| zinc finger protein 3 ( 386) 1907 404.4 2.4e-110 gi|126324549|ref|XP_001366977.1| PREDICTED: hypoth ( 745) 1415 302.9 1.8e-79 gi|126324603|ref|XP_001369579.1| PREDICTED: simila ( 559) 1335 286.2 1.4e-74 gi|126342468|ref|XP_001377073.1| PREDICTED: simila (1093) 1327 284.8 7.1e-74 gi|22761179|dbj|BAC11485.1| unnamed protein produc ( 399) 1317 282.4 1.4e-73 gi|126324575|ref|XP_001368811.1| PREDICTED: simila ( 425) 1317 282.4 1.5e-73 gi|113413059|ref|XP_292895.5| PREDICTED: similar t ( 522) 1316 282.3 2e-73 gi|149722036|ref|XP_001495178.1| PREDICTED: zinc f ( 403) 1313 281.6 2.5e-73 gi|119592961|gb|EAW72555.1| zinc finger protein 13 ( 478) 1312 281.4 3.3e-73 gi|109126269|ref|XP_001095983.1| PREDICTED: simila ( 658) 1313 281.7 3.6e-73 gi|194386290|dbj|BAG59709.1| unnamed protein produ ( 588) 1312 281.5 3.9e-73 gi|21753218|dbj|BAC04309.1| unnamed protein produc ( 616) 1312 281.5 4e-73 gi|119592960|gb|EAW72554.1| zinc finger protein 13 ( 628) 1312 281.5 4.1e-73 gi|149415319|ref|XP_001519206.1| PREDICTED: simila ( 536) 1311 281.2 4.2e-73 gi|160370006|sp|P52742.2|ZN135_HUMAN RecName: Full ( 658) 1312 281.5 4.2e-73 gi|194215235|ref|XP_001495155.2| PREDICTED: simila ( 882) 1313 281.8 4.5e-73 gi|114554594|ref|XP_524606.2| PREDICTED: zinc fing ( 452) 1309 280.8 4.9e-73 gi|108999043|ref|XP_001102479.1| PREDICTED: zinc f ( 469) 1309 280.8 5e-73 gi|149694262|ref|XP_001504280.1| PREDICTED: zinc f ( 470) 1309 280.8 5e-73 gi|20141030|sp|Q9C0F3.2|ZN436_HUMAN RecName: Full= ( 470) 1309 280.8 5e-73 gi|194665012|ref|XP_001789139.1| PREDICTED: simila ( 470) 1309 280.8 5e-73 gi|114554588|ref|XP_001165342.1| PREDICTED: zinc f ( 470) 1309 280.8 5e-73 gi|126322950|ref|XP_001369114.1| PREDICTED: simila ( 696) 1311 281.3 5e-73 gi|114677092|ref|XP_512625.2| PREDICTED: zinc fing (1377) 1314 282.2 5.5e-73 gi|73947917|ref|XP_541480.2| PREDICTED: similar to ( 532) 1309 280.8 5.5e-73 gi|194379180|dbj|BAG58141.1| unnamed protein produ ( 670) 1309 280.9 6.5e-73 gi|73947795|ref|XP_853558.1| PREDICTED: similar to (1186) 1311 281.5 7.5e-73 gi|8439407|emb|CAB94195.1| zinc finger protein [Ho ( 250) 1302 279.1 8.5e-73 gi|488555|gb|AAC50254.1| zinc finger protein ZNF13 ( 469) 1304 279.7 1e-72 gi|75075042|sp|Q9XSR1.1|ZN252_CANFA RecName: Full= ( 873) 1307 280.6 1.1e-72 gi|31874767|emb|CAD98083.1| hypothetical protein [ ( 535) 1303 279.6 1.3e-72 gi|122132254|sp|Q08DG8.1|ZN135_BOVIN RecName: Full ( 657) 1304 279.9 1.3e-72 gi|75070500|sp|Q5R5Y7.1|ZN436_PONAB RecName: Full= ( 470) 1301 279.1 1.6e-72 >>gi|26345314|dbj|BAC36308.1| unnamed protein product [M (439 aa) initn: 3022 init1: 3022 opt: 3022 Z-score: 3383.3 bits: 635.2 E(): 9.6e-180 Smith-Waterman score: 3022; 99.772% identity (100.000% similar) in 439 aa overlap (12-450:1-439) 10 20 30 40 50 60 mKIAA4 PTSDQSISPSPMETQADHASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQ ::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 METQADHASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQ 10 20 30 40 70 80 90 100 110 120 mKIAA4 ELVTFEDVAVYFIWREWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ELVTFEDVAVYFIWREWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGS 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 ERNEKYSEFGNSFTVNSKLISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPY :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ERNKKYSEFGNSFTVNSKLISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPY 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS 350 360 370 380 390 400 430 440 450 mKIAA4 SALVRHQRIHTGEKPLTVMGVKQKLSQSLC :::::::::::::::::::::::::::::: gi|263 SALVRHQRIHTGEKPLTVMGVKQKLSQSLC 410 420 430 >>gi|149028518|gb|EDL83890.1| rCG55970 [Rattus norvegicu (446 aa) initn: 4070 init1: 2912 opt: 2912 Z-score: 3260.2 bits: 612.4 E(): 6.9e-173 Smith-Waterman score: 2912; 96.110% identity (98.398% similar) in 437 aa overlap (12-448:1-437) 10 20 30 40 50 60 mKIAA4 PTSDQSISPSPMETQADHASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQ :::::::::: : :::::.:::::::::::::::::::::::::::::: gi|149 METQADHASQEPRPLLESTLSSSKVPSFPDKDSLGDKMLAAALLKAKSQ 10 20 30 40 70 80 90 100 110 120 mKIAA4 ELVTFEDVAVYFIWREWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGS ::::::::::::::.::::::::::::::::::::::::::::::::::::.:::::::: gi|149 ELVTFEDVAVYFIWKEWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDQVISEGMGS 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIG :::::::::::::::::::::::::::::::::.:::::::::::::::::::.::::.: gi|149 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGSSSVGRLNRKIQEFHQVRVEKKLTHMG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 ERNEKYSEFGNSFTVNSKLISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPY :::::::::::.::::::: ::::: :::.:::::::::::::::::::::::::::::: gi|149 ERNEKYSEFGNNFTVNSKLTSHQRLPMGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPY 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS 350 360 370 380 390 400 430 440 450 mKIAA4 SALVRHQRIHTGEKPLTVMGVKQKLSQSLC ::::::::::::::::.::: :::. : gi|149 SALVRHQRIHTGEKPLNVMGEKQKFRVSAELNIREST 410 420 430 440 >>gi|5640017|gb|AAD45929.1|AF167320_1 zinc finger protei (402 aa) initn: 2700 init1: 2700 opt: 2700 Z-score: 3023.8 bits: 568.5 E(): 1e-159 Smith-Waterman score: 2700; 97.015% identity (98.507% similar) in 402 aa overlap (49-450:1-402) 20 30 40 50 60 70 mKIAA4 ASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQELVTFEDVAVYFIWREWK :::::::::::::::::::::::::::::: gi|564 MLAAALLKAKSQELVTFEDVAVYFIWREWK 10 20 30 80 90 100 110 120 130 mKIAA4 RLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGSCEMILGRFQKDVSQGLKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 RLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGSCEMILGRFQKDVSQGLKF 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 EEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIGERNEKYSEFGNSFTVNSK :::::::::::::::::::::::::::::::::::.. . .. .:::::::::::::: gi|564 EEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEKSSPILEKEMRKYSEFGNSFTVNSK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 LISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECSECGKAFSQSAHLIQH :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 LISHPRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECSECGKAFSQSAHLIQH 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 QRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNECGKTFSWSSTLTHHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 QRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNECGKTFSWSSTLTHHQRIH 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA4 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA4 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLTV 340 350 360 370 380 390 440 450 mKIAA4 MGVKQKLSQSLC :::::::::::: gi|564 MGVKQKLSQSLC 400 >>gi|194218814|ref|XP_001915564.1| PREDICTED: zinc finge (447 aa) initn: 3742 init1: 2594 opt: 2594 Z-score: 2904.6 bits: 546.6 E(): 4.4e-153 Smith-Waterman score: 2594; 86.574% identity (95.370% similar) in 432 aa overlap (12-443:1-432) 10 20 30 40 50 60 mKIAA4 PTSDQSISPSPMETQADHASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQ ::::::..:: : :::::: :::::.: .::::::.:::::::::::. gi|194 METQADRVSQEPQALLESALPSSKVPAFANKDSLGDEMLAAALLKAKSR 10 20 30 40 70 80 90 100 110 120 mKIAA4 ELVTFEDVAVYFIWREWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGS ::::::::::::: .:::::::::::::::::::::::::::::...: .:. ::: :: gi|194 ELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDGETRTEHDQEISEDTGS 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIG ..:::.:::.:::.::::::::::.:. :::::: :::::::.: :: :::.:. : gi|194 HGVLLGRLQKDISQGFKFEEAYEQEVTLKGQLGNSSGERLNRKIQDFGQVIVEENLSPRG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 ERNEKYSEFGNSFTVNSKLISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPY ::.:::..:::::::.:.:.::::: .::.:::::::::::::::::::::::::::::: gi|194 ERSEKYNDFGNSFTVSSNLVSHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPY 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE ::::::::::::.:::::::::::::::::.:::::::::::::::.:::::::::::.: gi|194 ECSECGKAFSQSSHLIQHQRIHTGEKPYECNDCGKTFSCSSALILHRRIHTGEKPYECSE 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS 350 360 370 380 390 400 430 440 450 mKIAA4 SALVRHQRIHTGEKPLTVMGVKQKLSQSLC ::::::::::::::::.:::... gi|194 SALVRHQRIHTGEKPLNVMGMSRSSLRVTAELNIREST 410 420 430 440 >>gi|55629028|ref|XP_519246.1| PREDICTED: zinc finger pr (446 aa) initn: 3649 init1: 2495 opt: 2562 Z-score: 2868.8 bits: 540.0 E(): 4.3e-151 Smith-Waterman score: 2562; 86.343% identity (93.750% similar) in 432 aa overlap (12-443:1-431) 10 20 30 40 50 60 mKIAA4 PTSDQSISPSPMETQADHASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQ :::::: .:: : ::.::: : :::.: :::::::.:::::::::::: gi|556 METQADLVSQEPQALLDSALPS-KVPAFSDKDSLGDEMLAAALLKAKSQ 10 20 30 40 70 80 90 100 110 120 mKIAA4 ELVTFEDVAVYFIWREWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGS ::::::::::::: .:::::::::::::::::::::::::::: ...: ::. ::: : gi|556 ELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRS 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIG ..:::::::.::::::.::::.::::.: :::: :::::. .: :: :::::: : gi|556 HGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 ERNEKYSEFGNSFTVNSKLISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPY ::.:::..:::::::::.::::::: .::.:::::::::::::::::::::::::::::: gi|556 ERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPY 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE ::.:::::::::.:::::::::::::::::.:::::::::::::::.::::::::::::: gi|556 ECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNE 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS 350 360 370 380 390 400 430 440 450 mKIAA4 SALVRHQRIHTGEKPLTVMGVKQKLSQSLC ::::::::::::::::. .:... gi|556 SALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIRDST 410 420 430 440 >>gi|46577682|sp|P17036.3|ZNF3_HUMAN RecName: Full=Zinc (446 aa) initn: 3649 init1: 2495 opt: 2562 Z-score: 2868.8 bits: 540.0 E(): 4.3e-151 Smith-Waterman score: 2562; 86.343% identity (93.750% similar) in 432 aa overlap (12-443:1-431) 10 20 30 40 50 60 mKIAA4 PTSDQSISPSPMETQADHASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQ :::::: .:: : ::.::: : :::.: :::::::.:::::::::::: gi|465 METQADLVSQEPQALLDSALPS-KVPAFSDKDSLGDEMLAAALLKAKSQ 10 20 30 40 70 80 90 100 110 120 mKIAA4 ELVTFEDVAVYFIWREWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGS ::::::::::::: .:::::::::::::::::::::::::::: ...: ::. ::: : gi|465 ELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRS 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIG ..:::::::.::::::.::::.::::.: :::: :::::. .: :: :::::: : gi|465 HGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 ERNEKYSEFGNSFTVNSKLISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPY ::.:::..:::::::::.::::::: .::.:::::::::::::::::::::::::::::: gi|465 ERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPY 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE ::.:::::::::.:::::::::::::::::.:::::::::::::::.::::::::::::: gi|465 ECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNE 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS 350 360 370 380 390 400 430 440 450 mKIAA4 SALVRHQRIHTGEKPLTVMGVKQKLSQSLC ::::::::::::::::. .:... gi|465 SALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST 410 420 430 440 >>gi|86823997|gb|AAI05477.1| Zinc finger protein 3 [Bos (447 aa) initn: 3740 init1: 2554 opt: 2555 Z-score: 2861.0 bits: 538.6 E(): 1.2e-150 Smith-Waterman score: 2555; 85.321% identity (93.349% similar) in 436 aa overlap (12-447:1-436) 10 20 30 40 50 60 mKIAA4 PTSDQSISPSPMETQADHASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQ ::::::..:: : :::::: ::: :.: :: .:::.::::::::::.: gi|868 METQADRVSQEPQALLESALPSSKGPTFSDKGGLGDEMLAAALLKAKAQ 10 20 30 40 70 80 90 100 110 120 mKIAA4 ELVTFEDVAVYFIWREWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGS ::::::::::::: .:::::::::::::::::::::::::::::...: : ::: :: gi|868 ELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSLDGETRTEPDSEISEDRGS 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIG ..:::::::.::::::::::::::::.::::.:: :::::.::: :: .::. . : gi|868 HGVLLGRFQKDISQGLKFEEAYEQEVSLKRQLGSSSGERLNRKMQEFGQVAAEEQRAPTG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 ERNEKYSEFGNSFTVNSKLISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPY :.:: :.. .::::...::::::: .::.:::::::::::::::::::::::::::::: gi|868 GRSEKCSDLRDSFTVSANLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPY 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE ::::::::::::.:::::::::::::::::.:::::::::::::::.::::::::::::: gi|868 ECSECGKAFSQSSHLIQHQRIHTGEKPYECNDCGKTFSCSSALILHRRIHTGEKPYECNE 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS 350 360 370 380 390 400 430 440 450 mKIAA4 SALVRHQRIHTGEKPLTVMGVKQKLSQSLC ::::::::::::::::.::::... : gi|868 SALVRHQRIHTGEKPLNVMGVSKSSLQVTAEVNIREST 410 420 430 440 >>gi|50949598|emb|CAH10562.1| hypothetical protein [Homo (446 aa) initn: 3638 init1: 2484 opt: 2551 Z-score: 2856.5 bits: 537.7 E(): 2.1e-150 Smith-Waterman score: 2551; 86.111% identity (93.519% similar) in 432 aa overlap (12-443:1-431) 10 20 30 40 50 60 mKIAA4 PTSDQSISPSPMETQADHASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQ :::::: .:: : ::.::: : :::.: :::::::.:::::::::::: gi|509 METQADLVSQEPQALLDSALPS-KVPAFSDKDSLGDEMLAAALLKAKSQ 10 20 30 40 70 80 90 100 110 120 mKIAA4 ELVTFEDVAVYFIWREWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGS ::::::::::::: .:::::::::::::::::::::::: ::: ...: ::. ::: : gi|509 ELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVSSLDRETRTENDQEISEDTRS 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 CEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIG ..:::::::.::::::.::::.::::.: :::: :::::. .: :: :::::: : gi|509 HGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 ERNEKYSEFGNSFTVNSKLISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPY ::.:::..:::::::::.::::::: .::.:::::::::::::::::::::::::::::: gi|509 ERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPY 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 ECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNE ::.:::::::::.:::::::::::::::::.:::::::::::::::.::::::::::::: gi|509 ECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNE 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 CGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 FSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYS 350 360 370 380 390 400 430 440 450 mKIAA4 SALVRHQRIHTGEKPLTVMGVKQKLSQSLC ::::::::::::::::. .:... gi|509 SALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST 410 420 430 440 >>gi|30582675|gb|AAP35564.1| zinc finger protein 3 (A8-5 (410 aa) initn: 3566 init1: 2412 opt: 2412 Z-score: 2701.6 bits: 509.0 E(): 9e-142 Smith-Waterman score: 2412; 87.848% identity (94.937% similar) in 395 aa overlap (49-443:1-395) 20 30 40 50 60 70 mKIAA4 ASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQELVTFEDVAVYFIWREWK ::::::::::::::::::::::::: .::: gi|305 MLAAALLKAKSQELVTFEDVAVYFIRKEWK 10 20 30 80 90 100 110 120 130 mKIAA4 RLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGSCEMILGRFQKDVSQGLKF ::::::::::::::::::::::::: ...: ::. ::: : ..:::::::.:::::: gi|305 RLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKF 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 EEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIGERNEKYSEFGNSFTVNSK .::::.::::.: :::: :::::. .: :: :::::: :::.:::..:::::::::. gi|305 KEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 LISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECSECGKAFSQSAHLIQH ::::::: .::.::::::::::::::::::::::::::::::::.:::::::::.::::: gi|305 LISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQH 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 QRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNECGKTFSWSSTLTHHQRIH ::::::::::::.:::::::::::::::.::::::::::::::::::::::::::::::: gi|305 QRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA4 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA4 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLTV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|305 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNG 340 350 360 370 380 390 440 450 mKIAA4 MGVKQKLSQSLC .:... gi|305 IGMSKSSLRVTTELNIREST 400 410 >>gi|30584085|gb|AAP36291.1| Homo sapiens zinc finger pr (411 aa) initn: 3566 init1: 2412 opt: 2412 Z-score: 2701.6 bits: 509.0 E(): 9e-142 Smith-Waterman score: 2412; 87.848% identity (94.937% similar) in 395 aa overlap (49-443:1-395) 20 30 40 50 60 70 mKIAA4 ASQAPLPLLESALSSSKVPSFPDKDSLGDKMLAAALLKAKSQELVTFEDVAVYFIWREWK ::::::::::::::::::::::::: .::: gi|305 MLAAALLKAKSQELVTFEDVAVYFIRKEWK 10 20 30 80 90 100 110 120 130 mKIAA4 RLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDRVISEGMGSCEMILGRFQKDVSQGLKF ::::::::::::::::::::::::: ...: ::. ::: : ..:::::::.:::::: gi|305 RLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKF 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 EEAYEQEVSLQRQLGNSSVGRLNRKIQEFHQVRVEEKLTHIGERNEKYSEFGNSFTVNSK .::::.::::.: :::: :::::. .: :: :::::: :::.:::..:::::::::. gi|305 KEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 LISHQRLQMGDKPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECSECGKAFSQSAHLIQH ::::::: .::.::::::::::::::::::::::::::::::::.:::::::::.::::: gi|305 LISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQH 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 QRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNECGKTFSWSSTLTHHQRIH ::::::::::::.:::::::::::::::.::::::::::::::::::::::::::::::: gi|305 QRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA4 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA4 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLTV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|305 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNG 340 350 360 370 380 390 440 450 mKIAA4 MGVKQKLSQSLC .:... gi|305 IGMSKSSLRVTTELNIRESTL 400 410 450 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Wed Mar 18 05:27:39 2009 done: Wed Mar 18 05:34:09 2009 Total Scan time: 884.590 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]