FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4103.ptfa, 978 aa vs ./tmplib.26680 library 1768039 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.5741+/-0.00747; mu= -2.9340+/- 0.491 mean_var=343.4803+/-84.255, 0's: 0 Z-trim: 9 B-trim: 0 in 0/36 Lambda= 0.0692 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1319 ( 1240 res) mic06048 (1240) 272 42 0.00045 >>mKIAA1319 ( 1240 res) mic06048 (1240 aa) initn: 173 init1: 90 opt: 272 Z-score: 165.4 bits: 42.4 E(): 0.00045 Smith-Waterman score: 284; 19.744% identity (21.517% ungapped) in 704 aa overlap (192-863:399-1076) 170 180 190 200 210 220 mKIAA4 KHEMAWAVVNEIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYKDIQDKLEK :.: ::::: : .:.. :: . .. . mKIAA1 SVRRKVSLVLEQMQPLGMVSPASTKALAGQAELTRKMEELQKKLDEEVKKRQKLEPSRVG 370 380 390 400 410 420 230 240 250 260 270 mKIAA4 ISEETNARAPECMALKTDVIARTRAF--NDAEVLYNRSL--NEYKALKKDGEQLCKRIEE . .. . .: :: :. ... : .. .... : : .: .. ..:.. : :... mKIAA1 LERQLEEKAEECHRLQ-ELLERRKGEVQQSSKELQNMKLLLGQEEGLRHGLEAQVKELQ- 430 440 450 460 470 480 280 290 300 310 320 330 mKIAA4 LKKSTDQSLEPERLERQKRICWLKEKVKALQDQEHTVNQEAEQFEQAIEKDKQE-HGRVR :: . .:: . . : . .: .. : . .. :... . :. . : . .: mKIAA1 LKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALKGALKEEVA 490 500 510 520 530 540 340 350 360 370 380 390 mKIAA4 KEDIEVRHALNYNQRQLKELKDSKTDRLKRFGP---HVPALLEAIDDAYRRRQFTHKPIG ..: ::.:. ::. ..:. : : . . . . . . :. . : . : mKIAA1 SHDQEVEHVRLQYQRDTEQLRRSMQDATQDHAALEAERQKMSSLVRELQRELEETSEETG 550 560 570 580 590 600 400 410 420 430 440 450 mKIAA4 PLGACIHLRDPELALAIESCLKGLLQAYCCHNHADER--VLQSLMKKFYPPGTSRPQIIV . .. :: . . :. .. ... :. ::: ... ...: : mKIAA1 HWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKMEVLQRDLEQAR--ASTRDTHQV 610 620 630 640 650 660 460 470 480 490 500 mKIAA4 SEFRDEVYDVRLRAAYHPEFPTVLTALEI----DNAVVANSLIDMRSIETVLLIKNNSVA :.. :. : . :. . :. .: :. ..: .: .. . mKIAA1 EELKKEL---RRTQGELKELQAEQQNQEVTGRHQNQVLEKQLAALREEAD----RGRELE 670 680 690 700 710 510 520 530 540 550 560 mKIAA4 RAVMQSQKPPKNCREAFTADGDQVFAGRYYSSESTRPKFLSRDVDSEISDLETEIENK-- . .: :: .. :. : ... .. .::. . .: . : . ::. :: mKIAA1 QQNLQLQKTLQQLRQ----DCEEASKAKV-ASETEAMVLGQRRATVETTLRETQEENDEF 720 730 740 750 760 770 570 580 590 600 610 620 mKIAA4 KGHIITLQQRLSALEKDIKRNEELLKRC--QLHYKEI-KMKIRKNISEIRELENIEEHQS . .:. :.:.:. . . .: . : ..: :. :..... .. :: :. . mKIAA1 RRRILGLEQQLKEARGLAEGGEAVEARLRDKVHRLEVEKQQLEEALNAAREEEGNLAAAK 780 790 800 810 820 830 630 640 650 660 670 mKIAA4 VDIATLEDEAEENKIKM----QMVEKNMEQQKENMENLKSLKIEAENKYDTIKLKINQLS . . :::... .. : ... .:.. .. : :. : : :.. .. ...:. mKIAA1 RALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLN 840 850 860 870 880 890 680 690 700 710 720 730 mKIAA4 ELADPLKDELNLADSEV-----DSQKRGKQHYEDKQKEHLDTLNKKRRELDMKEKELQEK . . . :. .:: ... : ....... : :.. : .. ... . ::.. mKIAA1 KELEQIGDDSKLALQQLQAQMEDYKEKARKEVADAQRQAKDWASEAEKNSGGLSR-LQDE 900 910 920 930 940 950 740 750 760 770 780 790 mKIAA4 MSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMKQYQEARETYL-DL ... :: . ....... ::::. : :..:. . .. : :..:. . : .: mKIAA1 LQRLRQAL-QTSQAERDTARLDKEL--LAQRLQGLE----QEAENKKRFQDDKARQLKSL 960 970 980 990 1000 800 810 820 830 840 mKIAA4 DNKVRTLRRFI---KLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFDH ..:: :. . : :..: : . .. . :: .:. . : : :..... mKIAA1 EEKVSRLEAELDEEKNTVELLTDRVNRGRD--QVDQLRTELMQERSARQDLECDKISLER 1010 1020 1030 1040 1050 1060 850 860 870 880 890 900 mKIAA4 KNETLSITVQPGEGNKASFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMD .:. :. . .:: mKIAA1 QNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERRVKEL 1070 1080 1090 1100 1110 1120 978 residues in 1 query sequences 1768039 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:01:58 2006 done: Mon Mar 27 11:01:59 2006 Scan time: 1.010 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]