FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4015.ptfa, 1109 aa vs ./tmplib.26680 library 1767908 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.7444+/-0.00597; mu= 5.9847+/- 0.395 mean_var=221.4693+/-53.592, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0862 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0122 ( 860 res) mbg05536 ( 860) 496 75 5.1e-14 >>mKIAA0122 ( 860 res) mbg05536 (860 aa) initn: 880 init1: 289 opt: 496 Z-score: 344.1 bits: 75.1 E(): 5.1e-14 Smith-Waterman score: 766; 26.240% identity (35.843% ungapped) in 907 aa overlap (393-1107:3-858) 370 380 390 400 410 420 mKIAA4 KLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFGYGQS-KSFSQ :...:: : :.. :: . .: .. mKIAA0 NSYQDMEYERRGGR--GDRTGRYGATDRSQDD 10 20 30 430 440 450 460 470 480 mKIAA4 GKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSDGIPVKDLQL . .:. ..: .:.:::. : : .. . . . :: . .. : :. .....: mKIAA0 SGENRSRDHDYRDMDYRSYPREYGSQEGKHEYDDSSEEQSAEIRGQLQ-SHGVQAREVRL 40 50 60 70 80 490 500 510 520 530 mKIAA4 -KEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYV-PSPDF---WYC-K .. ..: . :.. :::: :.:: ::::: .: : ..:...: :.: . : : : mKIAA0 MRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNK 90 100 110 120 130 140 540 550 560 570 580 590 mKIAA4 RCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHELRK .: ... .. .: : :: :..:.: . .. ..:. ... . : . .. . mKIAA0 QCGVQNFKRREKCFKCGVPKSEAEQKLPLGTRLDQQALPLGGRELSQGLLPLPQPYQAQG 150 160 170 180 190 200 600 610 620 630 640 650 mKIAA4 REEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRIYRS .: : .:: :... .: ::.:. . mKIAA0 VLTSQALSQG-------------------------SEP-SSENAND----TIILRNLNPH 210 220 230 660 670 680 690 700 710 mKIAA4 TPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHA-EALRVVKILQNLDPP . . :. .: ::. :...:::.::.. ... ..::.:.. . .: ....::: : :: mKIAA0 STMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVVRAAQLLQILQALHPP 240 250 260 270 280 290 720 730 mKIAA4 FSIDGKMVAVNLATGKRRN-----------------------------DSGDHS------ ..:::: . :..: :..:. ..: .: mKIAA0 LTIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQASQGGESAWAAPE 300 310 320 330 340 350 740 750 mKIAA4 ----DHMHYYQ----GKK----------YFRDRRG----GNR------------------ :. .: : :.. :... .: :.. mKIAA0 EPPVDYSYYQQDEGYGSSQGTDSLYAHGYLKNSKGPGMTGTKGDPAGTGPEASLEAGADS 360 370 380 390 400 410 760 770 mKIAA4 ------------------------NSDWSSDTNRQG-----------------QQSSS-- .: :. :: :. : ::: mKIAA0 VSLQAFSRAQPGAAPGLYQQSAEGSSGQSTATNSQSYTIISPAVLKAELQSPTQPSSSAF 420 430 440 450 460 470 780 790 800 mKIAA4 --------------------DCYIYDSTTGYYYDPLAGTYYDPNTQ-------------- . : :: :.:::::: .: :::::.: mKIAA0 PPATSPTAPEAYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWD 480 490 500 510 520 530 810 820 830 840 850 mKIAA4 --QEVYVPQDPESPDEEEIKEKKSTSQGKSNSKKETSKRDGKEKKD-----RGMTKFQES ...:.: .: : .. :...:: ...:. .: . :: :...: .:. mKIAA0 GERRTYIPALEQSADGHK-DTGASSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKEN 540 550 560 570 580 590 860 870 880 890 mKIAA4 TSEGKPP---LED--------------VFKKPLPPTVKKEESPPPPKVVN-----PLIGL ... : :.: ...: . ... : ::... : :: mKIAA0 FKNSFQPISALRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGL 600 610 620 630 640 650 900 910 920 930 940 950 mKIAA4 LGEYGGDSDYEEEEEEEQAPPVQPQPQPREEMTKKENEDDKLTDWNKLACLLCRRQFPNK .. :.:.:: :::.: . :. ::: :::::.::::::::::::.: mKIAA0 VAAYSGESDSEEEQE-------RGGPE-REE---------KLTDWQKLACLLCRRQFPSK 660 670 680 690 700 960 970 980 990 1000 1010 mKIAA4 EVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREG-RFKEKGNDRREKLQSFDSP :.: .::::: ::::::::::. . ::.:: ::. . : ...... .:::: . : mKIAA0 EALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPP 710 720 730 740 750 760 1020 1030 1040 1050 1060 1070 mKIAA4 ERKRIKYS--RETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEIE : :: ::. .. : . .. ... :. :: ::..:.::: .. :. . : . mKIAA0 EPKRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQ 770 780 790 800 810 820 1080 1090 1100 mKIAA4 GRMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD :.:: : : : . :.:.:.......: .:..: mKIAA0 TRVRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ 830 840 850 860 1109 residues in 1 query sequences 1767908 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:59:16 2006 done: Mon Mar 27 10:59:17 2006 Scan time: 1.020 Display time: 0.090 Function used was FASTA [version 3.4t11 Apr 17, 2002]