# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj41118.fasta.nr -Q ../query/mKIAA4015.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4015, 1109 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915860 sequences Expectation_n fit: rho(ln(x))= 5.8955+/-0.000196; mu= 11.6325+/- 0.011 mean_var=113.0482+/-21.521, 0's: 26 Z-trim: 44 B-trim: 0 in 0/66 Lambda= 0.120626 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148689283|gb|EDL21230.1| RNA binding motif prot (1117) 7696 1351.2 0 gi|160333291|ref|NP_035381.2| RNA binding motif pr (1118) 7667 1346.1 0 gi|20070682|gb|AAH26129.1| Rbm6 protein [Mus muscu (1122) 7659 1344.7 0 gi|4883437|emb|CAA07065.2| RNA binding protein [Mu (1117) 7638 1341.1 0 gi|149018573|gb|EDL77214.1| similar to Rbm6 protei (1119) 7383 1296.7 0 gi|3212101|gb|AAC21578.1| RNA binding protein DEF- (1123) 6893 1211.4 0 gi|116242749|sp|P78332.5|RBM6_HUMAN RecName: Full= (1123) 6890 1210.9 0 gi|114586963|ref|XP_516472.2| PREDICTED: RNA bindi (1114) 6887 1210.4 0 gi|2952272|gb|AAC05826.1| lung cancer antigen NY-L (1123) 6882 1209.5 0 gi|158256870|dbj|BAF84408.1| unnamed protein produ (1123) 6861 1205.9 0 gi|73985449|ref|XP_850379.1| PREDICTED: similar to (1122) 6833 1201.0 0 gi|149728632|ref|XP_001496749.1| PREDICTED: simila (1123) 6796 1194.5 0 gi|74216825|dbj|BAE26539.1| unnamed protein produc ( 986) 6784 1192.4 0 gi|73985453|ref|XP_861394.1| PREDICTED: similar to (1047) 6348 1116.5 0 gi|73985451|ref|XP_861362.1| PREDICTED: similar to ( 990) 5975 1051.6 0 gi|28302326|gb|AAH46643.1| RBM6 protein [Homo sapi ( 601) 3634 644.0 7.2e-182 gi|193787562|dbj|BAG52768.1| unnamed protein produ ( 601) 3628 643.0 1.5e-181 gi|73985455|ref|XP_861409.1| PREDICTED: similar to ( 600) 3622 641.9 3.1e-181 gi|126335833|ref|XP_001368123.1| PREDICTED: simila (1142) 3503 621.5 8.3e-175 gi|74216761|dbj|BAE37785.1| unnamed protein produc ( 463) 3121 554.6 4.5e-155 gi|194382516|dbj|BAG64428.1| unnamed protein produ ( 520) 3072 546.1 1.8e-152 gi|194389754|dbj|BAG60393.1| unnamed protein produ ( 465) 2878 512.3 2.4e-142 gi|149482184|ref|XP_001515728.1| PREDICTED: simila ( 442) 2029 364.6 7e-98 gi|149413058|ref|XP_001508646.1| PREDICTED: simila ( 452) 1819 328.0 7.1e-87 gi|148707557|gb|EDL39504.1| mCG18466 [Mus musculus ( 314) 1792 323.2 1.4e-85 gi|26379487|dbj|BAB29054.2| unnamed protein produc ( 244) 1648 298.0 4.2e-78 gi|109060351|ref|XP_001115187.1| PREDICTED: simila ( 248) 1542 279.6 1.5e-72 gi|60098859|emb|CAH65260.1| hypothetical protein [ ( 958) 1496 272.1 1e-69 gi|224065822|ref|XP_002190389.1| PREDICTED: RNA bi (1168) 1324 242.3 1.2e-60 gi|149458751|ref|XP_001516386.1| PREDICTED: simila ( 224) 1028 190.1 1.2e-45 gi|114586975|ref|XP_001167477.1| PREDICTED: RNA bi ( 756) 757 143.4 4.4e-31 gi|149413060|ref|XP_001508682.1| PREDICTED: simila (1033) 652 125.3 1.8e-25 gi|126335837|ref|XP_001368163.1| PREDICTED: simila ( 817) 650 124.8 1.9e-25 gi|13278337|gb|AAH03988.1| Rbm5 protein [Mus muscu ( 520) 639 122.7 5.2e-25 gi|194386328|dbj|BAG59728.1| unnamed protein produ ( 643) 640 123.0 5.3e-25 gi|59809193|gb|AAH89976.1| Rbm5 protein [Rattus no ( 346) 634 121.7 7.1e-25 gi|62087206|dbj|BAD92050.1| RNA binding motif prot ( 505) 636 122.2 7.3e-25 gi|148689278|gb|EDL21225.1| RNA binding motif prot ( 658) 637 122.5 7.8e-25 gi|148689279|gb|EDL21226.1| RNA binding motif prot ( 707) 637 122.5 8.2e-25 gi|81902437|sp|Q91YE7.1|RBM5_MOUSE RecName: Full=R ( 815) 637 122.6 9.1e-25 gi|194380416|dbj|BAG63975.1| unnamed protein produ ( 744) 636 122.4 9.6e-25 gi|114586983|ref|XP_001167117.1| PREDICTED: RNA bi ( 814) 636 122.4 1e-24 gi|13124794|sp|P52756.2|RBM5_HUMAN RecName: Full=R ( 815) 636 122.4 1e-24 gi|109039557|ref|XP_001103773.1| PREDICTED: RNA bi ( 815) 636 122.4 1e-24 gi|73985445|ref|XP_861280.1| PREDICTED: similar to ( 568) 633 121.7 1.1e-24 gi|73985439|ref|XP_850319.1| PREDICTED: similar to ( 643) 633 121.8 1.2e-24 gi|1244404|gb|AAA99715.1| putative tumor suppresso ( 815) 634 122.1 1.3e-24 gi|149018576|gb|EDL77217.1| RNA binding motif prot ( 815) 634 122.1 1.3e-24 gi|149728630|ref|XP_001496627.1| PREDICTED: simila ( 815) 633 121.9 1.5e-24 gi|1613900|gb|AAB42216.1| partial CDS, human putat ( 698) 630 121.3 1.9e-24 >>gi|148689283|gb|EDL21230.1| RNA binding motif protein (1117 aa) initn: 7696 init1: 7696 opt: 7696 Z-score: 7238.4 bits: 1351.2 E(): 0 Smith-Waterman score: 7696; 99.819% identity (99.909% similar) in 1104 aa overlap (6-1109:14-1117) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . ::::::::::::::::::::::::::::::::::::::::::::: gi|148 MWGDSRSANRTGPFRGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE 550 560 570 580 590 600 600 610 620 630 640 650 mKIAA4 LRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI 610 620 630 640 650 660 660 670 680 690 700 710 mKIAA4 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD 670 680 690 700 710 720 720 730 740 750 760 770 mKIAA4 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ 730 740 750 760 770 780 780 790 800 810 820 830 mKIAA4 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS 790 800 810 820 830 840 840 850 860 870 880 890 mKIAA4 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG 850 860 870 880 890 900 900 910 920 930 940 950 mKIAA4 LLGEYGGDSDYEEEEEEEQAPPVQPQPQPREEMTKKENEDDKLTDWNKLACLLCRRQFPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLGEYGGDSDYEEEEEEEQAPPVQPQPQPREEMTKKENEDDKLTDWNKLACLLCRRQFPN 910 920 930 940 950 960 960 970 980 990 1000 1010 mKIAA4 KEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQSFDSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQSFDSP 970 980 990 1000 1010 1020 1020 1030 1040 1050 1060 1070 mKIAA4 ERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEIEGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEIEGR 1030 1040 1050 1060 1070 1080 1080 1090 1100 mKIAA4 MRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD ::::::::::::::::::::::::::::::::::::: gi|148 MRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 >>gi|160333291|ref|NP_035381.2| RNA binding motif protei (1118 aa) initn: 6397 init1: 6397 opt: 7667 Z-score: 7211.1 bits: 1346.1 E(): 0 Smith-Waterman score: 7667; 99.548% identity (99.729% similar) in 1105 aa overlap (6-1109:14-1118) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . ::::::::::::::::::::::::::::::::::::::::::::: gi|160 MWGDSRSANRTGPFRGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE 550 560 570 580 590 600 600 610 620 630 640 650 mKIAA4 LRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 LRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI 610 620 630 640 650 660 660 670 680 690 700 710 mKIAA4 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD 670 680 690 700 710 720 720 730 740 750 760 770 mKIAA4 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ 730 740 750 760 770 780 780 790 800 810 820 830 mKIAA4 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS 790 800 810 820 830 840 840 850 860 870 880 890 mKIAA4 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG 850 860 870 880 890 900 900 910 920 930 940 950 mKIAA4 LLGEYGGDSDYEEEEEEEQAPPVQPQP-QPREEMTKKENEDDKLTDWNKLACLLCRRQFP :::::::::::::::::::::::::. :::::::::::::::::::::::::::::::: gi|160 LLGEYGGDSDYEEEEEEEQAPPVQPRTAQPREEMTKKENEDDKLTDWNKLACLLCRRQFP 910 920 930 940 950 960 960 970 980 990 1000 1010 mKIAA4 NKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQSFDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 NKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQSFDS 970 980 990 1000 1010 1020 1020 1030 1040 1050 1060 1070 mKIAA4 PERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEIEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 PERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEIEG 1030 1040 1050 1060 1070 1080 1080 1090 1100 mKIAA4 RMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD :::::::::::::::::::::::::::::::::::::: gi|160 RMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 >>gi|20070682|gb|AAH26129.1| Rbm6 protein [Mus musculus] (1122 aa) initn: 6371 init1: 6371 opt: 7659 Z-score: 7203.6 bits: 1344.7 E(): 0 Smith-Waterman score: 7659; 99.098% identity (99.459% similar) in 1109 aa overlap (6-1109:14-1122) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . ::::::::::::::::::::::::::::::::::::::::::::: gi|200 MWGDSRSANRTGPFRGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|200 SGPPFANVEEHSFSYGARDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|200 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|200 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLNGVPENATKEEILNAFRTSD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE 550 560 570 580 590 600 600 610 620 630 640 650 mKIAA4 LRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 LRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI 610 620 630 640 650 660 660 670 680 690 700 710 mKIAA4 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD 670 680 690 700 710 720 720 730 740 750 760 770 mKIAA4 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ 730 740 750 760 770 780 780 790 800 810 820 830 mKIAA4 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS 790 800 810 820 830 840 840 850 860 870 880 890 mKIAA4 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG 850 860 870 880 890 900 900 910 920 930 940 mKIAA4 LLGEYGGDSDYEEEEEEEQAPPVQP-----QPQPREEMTKKENEDDKLTDWNKLACLLCR ::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|200 LLGEYGGDSDYEEEEEEEQAPPVQPRTAQPQPQPREEMTKKENEDDKLTDWNKLACLLCR 910 920 930 940 950 960 950 960 970 980 990 1000 mKIAA4 RQFPNKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 RQFPNKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQ 970 980 990 1000 1010 1020 1010 1020 1030 1040 1050 1060 mKIAA4 SFDSPERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|200 SFDSPERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSE 1030 1040 1050 1060 1070 1080 1070 1080 1090 1100 mKIAA4 EIEGRMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD :::::::::::::::::::::::::::::::::::::::::: gi|200 EIEGRMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 1120 >>gi|4883437|emb|CAA07065.2| RNA binding protein [Mus mu (1117 aa) initn: 7638 init1: 7638 opt: 7638 Z-score: 7183.8 bits: 1341.1 E(): 0 Smith-Waterman score: 7638; 99.185% identity (99.547% similar) in 1104 aa overlap (6-1109:14-1117) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . ::::: ::::::::::::::::::.:::::::::::::::::::: gi|488 MWGDSRSANRTGPFRGSQEEGFAPGWNRDYPPPPLKSHARERHSGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|488 HSGDFRDREGPPMDYRGGDGTHMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|488 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDSRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE 550 560 570 580 590 600 600 610 620 630 640 650 mKIAA4 LRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI ::::.::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|488 LRKRDEGQESRLGHQKRDTDRYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI 610 620 630 640 650 660 660 670 680 690 700 710 mKIAA4 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|488 YRSTPPEVIVEVLEPCVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD 670 680 690 700 710 720 720 730 740 750 760 770 mKIAA4 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ 730 740 750 760 770 780 780 790 800 810 820 830 mKIAA4 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS 790 800 810 820 830 840 840 850 860 870 880 890 mKIAA4 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG 850 860 870 880 890 900 900 910 920 930 940 950 mKIAA4 LLGEYGGDSDYEEEEEEEQAPPVQPQPQPREEMTKKENEDDKLTDWNKLACLLCRRQFPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 LLGEYGGDSDYEEEEEEEQAPPVQPQPQPREEMTKKENEDDKLTDWNKLACLLCRRQFPN 910 920 930 940 950 960 960 970 980 990 1000 1010 mKIAA4 KEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQSFDSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 KEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQSFDSP 970 980 990 1000 1010 1020 1020 1030 1040 1050 1060 1070 mKIAA4 ERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEIEGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|488 ERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEIEGR 1030 1040 1050 1060 1070 1080 1080 1090 1100 mKIAA4 MRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD ::::::::::::::::::::::::::::::::::::: gi|488 MRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 >>gi|149018573|gb|EDL77214.1| similar to Rbm6 protein (p (1119 aa) initn: 7245 init1: 6149 opt: 7383 Z-score: 6944.0 bits: 1296.7 E(): 0 Smith-Waterman score: 7383; 95.122% identity (98.735% similar) in 1107 aa overlap (6-1109:14-1119) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . :::::::::::::::::::::::::::: :::::::::::::::: gi|149 MWGDSRSANRTGPFRGSQEERFAPGWNRDYPPPPLKSHAQERHPGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI ::::::::::::::::.:::::.::::::::::::::::::::::::::::::::::::: gi|149 SGPPFANVEEHSFSYGARDGPHADYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT ::::::::::::::::::::.:.:::::::::.:::::::::.::::::.::.::::::. gi|149 HSGDFRDREGPPMDYRGGDGAPIDYRGRETPHINYRDRDSHTADFRSRDAPPSDFRGRGA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS ::::::::.:::.:::::::::::::::::::::::::.:::::::::::.::::::::: gi|149 YDLDFRGRDGSHADFRGRDLSDLDFRSRDQSRSDFRNREVSDLDFRDKDGAQVDFRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP :::::::::::.::::::::::.::::::::::::::::::::::::.:::::::::: gi|149 ATTDLDFRNRDAPHSDFRGRHRSRTYQDFRGREVGPCMEFKDREMPPVDPKVLDYIQPPA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :::::::::::::::: :::..:::::::::::::::::::::::::::::::::::::: gi|149 QEREHSGMNMNKREESTHDHTVERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::.:::::::.:::::::::::::::::::::.:::::::.:::::::::::.:::: gi|149 QSPVQDQDKPKLSAGEQQSSDAGLFKEEGDLDFLGRQDTDYRSMEYCDVDHRLPGSQIFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD ::::::: ::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|149 YGQSKSFPQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLNGVPENATKEEILNAFRTSD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :.:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GLPVKELQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPADKEHE :::::::::::::: ::.::::::::::::::::::::::::::::::::::::.::::: gi|149 YCKRCKASTGGHQSCCSYCKGPKEEVKQELVSYPQPQKTSIPVPSEKQPNQPRPVDKEHE 550 560 570 580 590 600 600 610 620 630 640 650 mKIAA4 LRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRI :::::::::::::::::.:::::::::::::::::::::: :::..:::::::::::::: gi|149 LRKREEGQESRLGHQKRETERYFPHSRREGLTFRRDREKESWSGETRQDGESKTIMLKRI 610 620 630 640 650 660 660 670 680 690 700 710 mKIAA4 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLD 670 680 690 700 710 720 720 730 740 750 760 770 mKIAA4 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQ 730 740 750 760 770 780 780 790 800 810 820 830 mKIAA4 QSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNS :::::::::::.::::::::::::::::::::::::::::::.::::::::::::::::: gi|149 QSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDPESPEEEEIKEKKSTSQGKSNS 790 800 810 820 830 840 840 850 860 870 880 890 mKIAA4 KKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIG ::::::::::::::::.::::::::::::: ::::::::::::::::::::::::::::: gi|149 KKETSKRDGKEKKDRGVTKFQESTSEGKPPPEDVFKKPLPPTVKKEESPPPPKVVNPLIG 850 860 870 880 890 900 900 910 920 930 940 mKIAA4 LLGEYGGDSDYEEEEEEEQAPPVQP---QPQPREEMTKKENEDDKLTDWNKLACLLCRRQ ::::::::::::::::::::::::: :::::::.::::::.::::::::::::::::: gi|149 LLGEYGGDSDYEEEEEEEQAPPVQPRAAQPQPREELTKKENEEDKLTDWNKLACLLCRRQ 910 920 930 940 950 960 950 960 970 980 990 1000 mKIAA4 FPNKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQSF ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|149 FPNKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGSDRREKLQSF 970 980 990 1000 1010 1020 1010 1020 1030 1040 1050 1060 mKIAA4 DSPERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEI ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|149 DSPERKRIKYSRETDSDRNPVDKEDTDTSSKGGCTQQATGWRKGAGLGYSHPGLGSSEEI 1030 1040 1050 1060 1070 1080 1070 1080 1090 1100 mKIAA4 EGRMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD :::::: .:: ::::::::::::::::::::::::::::: gi|149 EGRMRG-SGGAPGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 >>gi|3212101|gb|AAC21578.1| RNA binding protein DEF-3 [H (1123 aa) initn: 4714 init1: 3533 opt: 6893 Z-score: 6483.1 bits: 1211.4 E(): 0 Smith-Waterman score: 6893; 88.739% identity (95.856% similar) in 1110 aa overlap (6-1109:14-1123) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . ::::::::::::::::::::::::::::::::::::::::::::: gi|321 MWGDSRPANRTGPFRGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI ::::::::::::::::.::::::::.::::::::::::::::::::::::.:::::.::: gi|321 SGPPFANVEEHSFSYGARDGPHGDYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT ::::::::::::::::::::: :::::::.:::::::::.:.::::.::.::.::::::: gi|321 HSGDFRDREGPPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGT 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS ::::::::.:::.:::::::::::::.:.::::::::::::::::::::::::::::::: gi|321 YDLDFRGRDGSHADFRGRDLSDLDFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP .:::::::.:::::::::::::.:: :::::::.: :::::::::::.::..::::::: gi|321 GTTDLDFRDRDTPHSDFRGRHRSRTDQDFRGREMGSCMEFKDREMPPVDPNILDYIQPST 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :.:::::::.:.:::: :::..::::::.::::::::::::::::. .::::: .::::: gi|321 QDREHSGMNVNRREESTHDHTIERPAFGIQKGEFEHSETREGETQGVAFEHESPADFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::.::: .::: :.:::::::::::: :::::.:::::::.:: ::::::::.:.:: gi|321 QSPVQDQDKSQLSGREEQSSDAGLFKEEGGLDFLGRQDTDYRSMEYRDVDHRLPGSQMFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD ::::::: .:: .::::.::::::::::::::::.::::::::::.:::::::::::: : gi|321 YGQSKSFPEGKTARDAQRDLQDQDYRTGPSEEKPSRLIRLSGVPEDATKEEILNAFRTPD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :.:::.::::::::::::::::::::::::::::::::::::::.::::::::: : ::: gi|321 GMPVKNLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIQDKEVTLEYVSSLDFW 490 500 510 520 530 540 540 550 560 570 580 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKE--EVKQELVSYPQPQKTSIPVPSEKQPNQP-RPADK :::::::. :::.:::::::.:.: :.::::..::::::::::.: ::::::: ::::: gi|321 YCKRCKANIGGHRSSCSFCKNPREVTEAKQELITYPQPQKTSIPAPLEKQPNQPLRPADK 550 560 570 580 590 600 590 600 610 620 630 640 mKIAA4 EHELRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIML : : ::::::::::::::::..:::.: ::::: ::::::::: :::..::::::::::: gi|321 EPEPRKREEGQESRLGHQKREAERYLPPSRREGPTFRRDREKESWSGETRQDGESKTIML 610 620 630 640 650 660 650 660 670 680 690 700 mKIAA4 KRIYRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|321 KRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQ 670 680 690 700 710 720 710 720 730 740 750 760 mKIAA4 NLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNR ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|321 NLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNR 730 740 750 760 770 780 770 780 790 800 810 820 mKIAA4 QGQQSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGK ::::::::::::::.::::::::::::::::::::::::::: :.:::::::: ::::: gi|321 QGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEIKEKKPTSQGK 790 800 810 820 830 840 830 840 850 860 870 880 mKIAA4 SNSKKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNP :.:::: ::::::::::::.:.:::..:::: : :::::::::::::::::::::::::: gi|321 SSSKKEMSKRDGKEKKDRGVTRFQENASEGKAPAEDVFKKPLPPTVKKEESPPPPKVVNP 850 860 870 880 890 900 890 900 910 920 930 940 mKIAA4 LIGLLGEYGGDSDYEEEEEEEQAPPVQP---QPQPREEMTKKENEDDKLTDWNKLACLLC ::::::::::::::::::::::.:: :: ::: :::.::::::.:::::::::::::: gi|321 LIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLC 910 920 930 940 950 960 950 960 970 980 990 1000 mKIAA4 RRQFPNKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKL :::::::::: ::::::::::::::::::::::::::::::::::::.:: .:::::::: gi|321 RRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKL 970 980 990 1000 1010 1020 1010 1020 1030 1040 1050 1060 mKIAA4 QSFDSPERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSS :::::::::::::::::::::. ::::: ::::::::.:::::::::.::::.::::.:: gi|321 QSFDSPERKRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASS 1030 1040 1050 1060 1070 1080 1070 1080 1090 1100 mKIAA4 EEIEGRMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD :: :::::::. : :::::::::::::::::::::::::::: gi|321 EEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 1120 >>gi|116242749|sp|P78332.5|RBM6_HUMAN RecName: Full=RNA- (1123 aa) initn: 4714 init1: 3533 opt: 6890 Z-score: 6480.3 bits: 1210.9 E(): 0 Smith-Waterman score: 6890; 88.649% identity (95.856% similar) in 1110 aa overlap (6-1109:14-1123) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . ::::::::::::::::::::::::::::::::::::::::::::: gi|116 MWGDSRPANRTGPFRGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI ::::::::::::::::.::::::::.::::::::::::::::::::::::.:::::.::: gi|116 SGPPFANVEEHSFSYGARDGPHGDYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT ::::::::::::::::::::: :::::::.:::::::::.:.::::.::.::.::::::: gi|116 HSGDFRDREGPPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGT 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS ::::::::.:::.:::::::::::::.:.::::::::::::::::::::::::::::::: gi|116 YDLDFRGRDGSHADFRGRDLSDLDFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP .:::::::.:::::::::::::.:: :::::::.: :::::::::::.::..::::::: gi|116 GTTDLDFRDRDTPHSDFRGRHRSRTDQDFRGREMGSCMEFKDREMPPVDPNILDYIQPST 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :.:::::::.:.:::: :::..::::::.::::::::::::::::. .::::: .::::: gi|116 QDREHSGMNVNRREESTHDHTIERPAFGIQKGEFEHSETREGETQGVAFEHESPADFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::.::: .::: :.:::::::::::: :::::.:::::::.:: ::::::::.:.:: gi|116 QSPVQDQDKSQLSGREEQSSDAGLFKEEGGLDFLGRQDTDYRSMEYRDVDHRLPGSQMFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD ::::::: .:: .::::.::::::::::::::::.::::::::::.:::::::::::: : gi|116 YGQSKSFPEGKTARDAQRDLQDQDYRTGPSEEKPSRLIRLSGVPEDATKEEILNAFRTPD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :.:::.::::::::::::::::::::::::::::::::::::::.::::::::: : ::: gi|116 GMPVKNLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIQDKEVTLEYVSSLDFW 490 500 510 520 530 540 540 550 560 570 580 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKE--EVKQELVSYPQPQKTSIPVPSEKQPNQP-RPADK :::::::. :::.:::::::.:.: :.::::..::::::::::.: ::::::: ::::: gi|116 YCKRCKANIGGHRSSCSFCKNPREVTEAKQELITYPQPQKTSIPAPLEKQPNQPLRPADK 550 560 570 580 590 600 590 600 610 620 630 640 mKIAA4 EHELRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIML : : ::::::::::::::::..:::.: ::::: :::::::.: :::..::::::::::: gi|116 EPEPRKREEGQESRLGHQKREAERYLPPSRREGPTFRRDRERESWSGETRQDGESKTIML 610 620 630 640 650 660 650 660 670 680 690 700 mKIAA4 KRIYRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|116 KRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQ 670 680 690 700 710 720 710 720 730 740 750 760 mKIAA4 NLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNR ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|116 NLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNR 730 740 750 760 770 780 770 780 790 800 810 820 mKIAA4 QGQQSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGK ::::::::::::::.::::::::::::::::::::::::::: :.:::::::: ::::: gi|116 QGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEIKEKKPTSQGK 790 800 810 820 830 840 830 840 850 860 870 880 mKIAA4 SNSKKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNP :.:::: ::::::::::::.:.:::..:::: : :::::::::::::::::::::::::: gi|116 SSSKKEMSKRDGKEKKDRGVTRFQENASEGKAPAEDVFKKPLPPTVKKEESPPPPKVVNP 850 860 870 880 890 900 890 900 910 920 930 940 mKIAA4 LIGLLGEYGGDSDYEEEEEEEQAPPVQP---QPQPREEMTKKENEDDKLTDWNKLACLLC ::::::::::::::::::::::.:: :: ::: :::.::::::.:::::::::::::: gi|116 LIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLC 910 920 930 940 950 960 950 960 970 980 990 1000 mKIAA4 RRQFPNKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKL :::::::::: ::::::::::::::::::::::::::::::::::::.:: .:::::::: gi|116 RRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKL 970 980 990 1000 1010 1020 1010 1020 1030 1040 1050 1060 mKIAA4 QSFDSPERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSS :::::::::::::::::::::. ::::: ::::::::.:::::::::.::::.::::.:: gi|116 QSFDSPERKRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASS 1030 1040 1050 1060 1070 1080 1070 1080 1090 1100 mKIAA4 EEIEGRMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD :: :::::::. : :::::::::::::::::::::::::::: gi|116 EEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 1120 >>gi|114586963|ref|XP_516472.2| PREDICTED: RNA binding m (1114 aa) initn: 4719 init1: 3529 opt: 6887 Z-score: 6477.5 bits: 1210.4 E(): 0 Smith-Waterman score: 6887; 88.649% identity (95.856% similar) in 1110 aa overlap (6-1109:5-1114) 10 20 30 40 50 60 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGHSGPPFANV . ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MLDVFCGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGHSGPPFANV 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 EEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDIHSGDFRDR ::::::::.::::::::.::::::::::::::::::::::::.:::::.::::::::::: gi|114 EEHSFSYGARDGPHGDYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDR 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 EGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGTYDLDFRGR ::::::::::::: :::::::.:::::::::.:.::::.::.::.::::::::::::::: gi|114 EGPPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA4 EGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGSATTDLDFR .:::.:::::::: ::::.:.:::::::::::::::::::::::::::::::.::::::: gi|114 DGSHADFRGRDLSGLDFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGSGTTDLDFR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA4 NRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSPQEREHSGM .:::::::::::::.:: :::::::.: :::::::::::.::..::::::: :.:::::: gi|114 DRDTPHSDFRGRHRSRTDQDFRGREMGSCMEFKDREMPPVDPNILDYIQPSTQDREHSGM 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA4 NMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNSQSPVQEQD :.:.:::: :::..::::::.::::::::::::::::. .::::: .::::::::::.:: gi|114 NVNRREESTHDHTIERPAFGIQKGEFEHSETREGETQGVAFEHESPADFQNSQSPVQDQD 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA4 KPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFGYGQSKSFS : .::: :.:::::::::::: :::::.:::::::.:: ::::::::.:.::::::::: gi|114 KSQLSGREEQSSDAGLFKEEGGLDFLGRQDTDYRSMEYRDVDHRLPGSQMFGYGQSKSFP 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA4 QGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSDGIPVKDLQ .:: .::::.::::::::::::::::.::::::::::::::::::::::: ::.:::.:: gi|114 EGKTARDAQRDLQDQDYRTGPSEEKPSRLIRLSGVPENATKEEILNAFRTPDGMPVKNLQ 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA4 LKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFWYCKRCKAS ::::::::::::::::::::::::::::::::::::.::::::::: : ::::::::::. gi|114 LKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIQDKEVTLEYVSSLDFWYCKRCKAN 480 490 500 510 520 530 550 560 570 580 590 mKIAA4 TGGHQSSCSFCKGPKE--EVKQELVSYPQPQKTSIPVPSEKQPNQP-RPADKEHELRKRE :::.:::::::.:.: :.::::..::::::::::.: ::::::: :::::: : :::: gi|114 IGGHRSSCSFCKNPREVTEAKQELITYPQPQKTSIPAPLEKQPNQPLRPADKEPEPRKRE 540 550 560 570 580 590 600 610 620 630 640 650 mKIAA4 EGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIMLKRIYRSTP ::::::::::::..:::.: ::::: :::::::.: :::..::::::::::::::::::: gi|114 EGQESRLGHQKREAERYLPPSRREGPTFRRDRERESWSGETRQDGESKTIMLKRIYRSTP 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA4 PEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSI ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSI 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA4 DGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNRQGQQSSSD :::::::::::::::::::::::::::::.::::::::::.::::::::::::::::::: gi|114 DGKMVAVNLATGKRRNDSGDHSDHMHYYQAKKYFRDRRGGGRNSDWSSDTNRQGQQSSSD 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA4 CYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGKSNSKKETS ::::::.::::::::::::::::::::::::::: :.:::::::: ::::::.:::: : gi|114 CYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEIKEKKPTSQGKSSSKKEMS 780 790 800 810 820 830 840 850 860 870 880 890 mKIAA4 KRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEY :::::::::::.:.:::..:::: : :::::::::::::::::::::::::::::::::: gi|114 KRDGKEKKDRGVTRFQENASEGKAPAEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEY 840 850 860 870 880 890 900 910 920 930 940 950 mKIAA4 GGDSDYEEEEEEEQAPPVQP---QPQPREEMTKKENEDDKLTDWNKLACLLCRRQFPNKE ::::::::::::::.:: :: ::: :::.::::::.:::::::::::::::::::::: gi|114 GGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKE 900 910 920 930 940 950 960 970 980 990 1000 1010 mKIAA4 VLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKLQSFDSPER :: ::::::::::::::::::::::::::::::::::::.:::.:::::::::::::::: gi|114 VLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKERGNDRREKLQSFDSPER 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 mKIAA4 KRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSSEEIEGRMR :::::::::::::. ::::: ::::::::.:::::::::.::::.::::.:::: ::::: gi|114 KRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMR 1020 1030 1040 1050 1060 1070 1080 1090 1100 mKIAA4 GPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD ::. : :::::::::::::::::::::::::::: gi|114 GPSVGASGRTSKRQSNETYRDAVRRVMFARYKELD 1080 1090 1100 1110 >>gi|2952272|gb|AAC05826.1| lung cancer antigen NY-LU-12 (1123 aa) initn: 4714 init1: 3533 opt: 6882 Z-score: 6472.8 bits: 1209.5 E(): 0 Smith-Waterman score: 6882; 88.468% identity (95.856% similar) in 1110 aa overlap (6-1109:14-1123) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . ::::::::::::::::::::::::::::::::::::::::::::: gi|295 MWGDSRPANRTGPFRGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI ::::::::::::::::.::::::::.::::::::::::::::::::::::.:::::.::: gi|295 SGPPFANVEEHSFSYGARDGPHGDYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT ::::::::::::::::::::: :::::::.:::::::::.:.::::.::.::.::::::: gi|295 HSGDFRDREGPPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGT 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS ::::::::.:::.:::::::::::::.:.::::::::::::::::::::::::::::::: gi|295 YDLDFRGRDGSHADFRGRDLSDLDFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP .:::::::.:::::::::::::.:: :::::::.: :::::::::::.::..::::::: gi|295 GTTDLDFRDRDTPHSDFRGRHRSRTDQDFRGREMGSCMEFKDREMPPVDPNILDYIQPST 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :.:::::::.:.:::: :::..::::::.::::::::::::::::. .::::: .::::: gi|295 QDREHSGMNVNRREESTHDHTIERPAFGIQKGEFEHSETREGETQGVAFEHESPADFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::.::: .::: :.:::::::::::: :::::.:::::::.:: ::::::::.:.:: gi|295 QSPVQDQDKSQLSGREEQSSDAGLFKEEGGLDFLGRQDTDYRSMEYRDVDHRLPGSQMFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD ::::::: .:: .::::.::::::::::::::::.::::::::::.:::::::::::: : gi|295 YGQSKSFPEGKTARDAQRDLQDQDYRTGPSEEKPSRLIRLSGVPEDATKEEILNAFRTPD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :.:::.::::::::::::::::::::::::::::::::::::::.::::::::: : ::: gi|295 GMPVKNLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIQDKEVTLEYVSSLDFW 490 500 510 520 530 540 540 550 560 570 580 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKE--EVKQELVSYPQPQKTSIPVPSEKQPNQP-RPADK :::::::. :::.:::::::.:.: :.::::..::::::::::.: ::::::: ::::: gi|295 YCKRCKANIGGHRSSCSFCKNPREVTEAKQELITYPQPQKTSIPAPLEKQPNQPLRPADK 550 560 570 580 590 600 590 600 610 620 630 640 mKIAA4 EHELRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIML : : ::::::::::::::::..:::.: ::::: :::::::.: :::..::::::::::: gi|295 EPEPRKREEGQESRLGHQKREAERYLPPSRREGPTFRRDRERESWSGETRQDGESKTIML 610 620 630 640 650 660 650 660 670 680 690 700 mKIAA4 KRIYRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQ ::::::::::::::::::::.::::::::::::::::::::::::::::.:::::::::: gi|295 KRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHVEALRVVKILQ 670 680 690 700 710 720 710 720 730 740 750 760 mKIAA4 NLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNR ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|295 NLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNR 730 740 750 760 770 780 770 780 790 800 810 820 mKIAA4 QGQQSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGK ::::::::::::::..:::::::::::::::::::::::::: :.:::::::: ::::: gi|295 QGQQSSSDCYIYDSASGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEIKEKKPTSQGK 790 800 810 820 830 840 830 840 850 860 870 880 mKIAA4 SNSKKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNP :.:::: ::::::::::::.:.:::..:::: : :::::::::::::::::::::::::: gi|295 SSSKKEMSKRDGKEKKDRGVTRFQENASEGKAPAEDVFKKPLPPTVKKEESPPPPKVVNP 850 860 870 880 890 900 890 900 910 920 930 940 mKIAA4 LIGLLGEYGGDSDYEEEEEEEQAPPVQP---QPQPREEMTKKENEDDKLTDWNKLACLLC ::::::::::::::::::::::.:: :: ::: :::.::::::.:::::::::::::: gi|295 LIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLC 910 920 930 940 950 960 950 960 970 980 990 1000 mKIAA4 RRQFPNKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKL :::::::::: ::::::::::::::::::::::::::::::::::::.:: .:::::::: gi|295 RRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKL 970 980 990 1000 1010 1020 1010 1020 1030 1040 1050 1060 mKIAA4 QSFDSPERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSS :::::::::::::::::::::. ::::: ::::::::.:::::::::.::::.::::.:: gi|295 QSFDSPERKRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASS 1030 1040 1050 1060 1070 1080 1070 1080 1090 1100 mKIAA4 EEIEGRMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD :: :::::::. : :::::::::::::::::::::::::::: gi|295 EEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 1120 >>gi|158256870|dbj|BAF84408.1| unnamed protein product [ (1123 aa) initn: 4696 init1: 3515 opt: 6861 Z-score: 6453.0 bits: 1205.9 E(): 0 Smith-Waterman score: 6861; 88.378% identity (95.586% similar) in 1110 aa overlap (6-1109:14-1123) 10 20 30 40 50 mKIAA4 PCLCFYSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH . ::::::::::::::::::::::::::::::::::::::::::::: gi|158 MWGDSRPANRTGPFRGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 SGPPFANVEEHSFSYGGRDGPHGDYQGGEGPGHDFRGGDFSSSDFQSRDSAQLDFRNRDI ::::::::::::::::.::::: ::.::::::::::::::::::::::::.:::::.::: gi|158 SGPPFANVEEHSFSYGARDGPHDDYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 HSGDFRDREGPPMDYRGGDGTPMDYRGRETPHMNYRDRDSHTVDFRSRDVPPTDFRGRGT ::::::::::::::::::::: :::::::.:::::::::.:.::::.::.::.::::::: gi|158 HSGDFRDREGPPMDYRGGDGTSMDYRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGT 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 YDLDFRGREGSHSDFRGRDLSDLDFRSRDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS ::::::::.:::.:::::::::::::.:.::::::::::::::::::::::::::::::: gi|158 YDLDFRGRDGSHADFRGRDLSDLDFRAREQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGS 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 ATTDLDFRNRDTPHSDFRGRHRTRTYQDFRGREVGPCMEFKDREMPPMDPKVLDYIQPSP .:::::::.:::::::::::::.:: :::::::.: :::::::::::.::..::::::: gi|158 GTTDLDFRDRDTPHSDFRGRHRSRTDQDFRGREMGSCMEFKDREMPPVDPNILDYIQPST 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 QEREHSGMNMNKREESIHDHAMERPAFGVQKGEFEHSETREGETQSGTFEHESQSDFQNS :.:::::::.:.:::: :::..::::::.::::::::::::::::. .::::: .::::: gi|158 QDREHSGMNVNRREESTHDHTIERPAFGIQKGEFEHSETREGETQGVAFEHESPADFQNS 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA4 QSPVQEQDKPKLSGGEQQSSDAGLFKEEGDLDFLGQQDTDYRSIEYCDVDHRLPGNQIFG :::::.::: .::: :.:::::::::::: :::::.:::::::.:: :: :::::.:.:: gi|158 QSPVQDQDKSQLSGREEQSSDAGLFKEEGGLDFLGRQDTDYRSMEYRDVGHRLPGSQMFG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA4 YGQSKSFSQGKMSRDAQQDLQDQDYRTGPSEEKPNRLIRLSGVPENATKEEILNAFRTSD ::::::: .:: .::::.::::::::::::::::.::::::::::.:::::::::::: : gi|158 YGQSKSFPEGKTARDAQRDLQDQDYRTGPSEEKPSRLIRLSGVPEDATKEEILNAFRTPD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA4 GIPVKDLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSPDFW :.:::.::::::::::::::::::::::::::::::::::::::.::::::::: : ::: gi|158 GMPVKNLQLKEYNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIQDKEVTLEYVSSLDFW 490 500 510 520 530 540 540 550 560 570 580 mKIAA4 YCKRCKASTGGHQSSCSFCKGPKE--EVKQELVSYPQPQKTSIPVPSEKQPNQP-RPADK :::::::. :::.:::::::.:.: :.::::..::::::::::.: ::::::: ::::: gi|158 YCKRCKANIGGHRSSCSFCKNPREVTEAKQELITYPQPQKTSIPAPLEKQPNQPLRPADK 550 560 570 580 590 600 590 600 610 620 630 640 mKIAA4 EHELRKREEGQESRLGHQKRDTERYFPHSRREGLTFRRDREKEPWSGDSRQDGESKTIML : : ::::::::::::::::..:::. ::::: :::::::.: :::..::::::::::: gi|158 EPEPRKREEGQESRLGHQKREAERYLAPSRREGPTFRRDRERESWSGETRQDGESKTIML 610 620 630 640 650 660 650 660 670 680 690 700 mKIAA4 KRIYRSTPPEVIVEVLEPYVHLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|158 KRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQ 670 680 690 700 710 720 710 720 730 740 750 760 mKIAA4 NLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGNRNSDWSSDTNR ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|158 NLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNR 730 740 750 760 770 780 770 780 790 800 810 820 mKIAA4 QGQQSSSDCYIYDSTTGYYYDPLAGTYYDPNTQQEVYVPQDPESPDEEEIKEKKSTSQGK ::::::::::::::.::::::::::::::::::::::::::: :.:::::::: ::::: gi|158 QGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEIKEKKPTSQGK 790 800 810 820 830 840 830 840 850 860 870 880 mKIAA4 SNSKKETSKRDGKEKKDRGMTKFQESTSEGKPPLEDVFKKPLPPTVKKEESPPPPKVVNP :.:::: ::::::::::::.:.:::..:::: : :::::::::::::::::::::::::: gi|158 SSSKKEMSKRDGKEKKDRGVTRFQENASEGKAPAEDVFKKPLPPTVKKEESPPPPKVVNP 850 860 870 880 890 900 890 900 910 920 930 940 mKIAA4 LIGLLGEYGGDSDYEEEEEEEQAPPVQP---QPQPREEMTKKENEDDKLTDWNKLACLLC ::::::::::::::::::::::.:: :: ::: :::.::::::.:::::::::::::: gi|158 LIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLC 910 920 930 940 950 960 950 960 970 980 990 1000 mKIAA4 RRQFPNKEVLTKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKEKGNDRREKL :::::::::: ::::::::::::::::::::::::::::::::::::.:: .:::::::: gi|158 RRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKL 970 980 990 1000 1010 1020 1010 1020 1030 1040 1050 1060 mKIAA4 QSFDSPERKRIKYSRETDSDRNPVDKEDTDTSSKGGCAQQATGWRKGAGLGYSHPGLGSS :::::::::::::::::::::. ::::: ::::::::.:::::::::.::::.::::.:: gi|158 QSFDSPERKRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASS 1030 1040 1050 1060 1070 1080 1070 1080 1090 1100 mKIAA4 EEIEGRMRGPGGGPPGRTSKRQSNETYRDAVRRVMFARYKELD :: :::::::. : :::::::::::::::::::::::::::: gi|158 EEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYKELD 1090 1100 1110 1120 1109 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 01:53:44 2009 done: Tue Mar 17 02:02:48 2009 Total Scan time: 1181.670 Total Display time: 0.720 Function used was FASTA [version 34.26.5 April 26, 2007]