FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1816.ptfa, 826 aa vs ./tmplib.26680 library 1768191 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 12.4252+/-0.00951; mu= -16.6654+/- 0.629 mean_var=539.8402+/-133.377, 0's: 0 Z-trim: 20 B-trim: 0 in 0/36 Lambda= 0.0552 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1819 ( 443 res) mpj02074 ( 443) 448 50 5.8e-07 mKIAA0200 ( 1045 res) mpf00402 (1045) 413 48 7.2e-06 mFLJ00386 ( 769 res) mbe05021 ( 769) 373 45 5.3e-05 mKIAA0192 ( 1146 res) msp04171 (1146) 285 38 0.0089 >>mKIAA1819 ( 443 res) mpj02074 (443 aa) initn: 155 init1: 93 opt: 448 Z-score: 217.4 bits: 50.3 E(): 5.8e-07 Smith-Waterman score: 475; 26.782% identity (30.318% ungapped) in 463 aa overlap (387-825:9-441) 360 370 380 390 400 410 mKIAA1 VMNPPMAYAALPAHGQEQHAVGIPRTTGPMQNSVPSGSGSMVSGASPGGLGFLGSQPQAA ::. :: : . :. . :. :...:: mKIAA1 LDQHTVVGQNTGPSPSPNSCSNPNTGS-GYMNSQ---- 10 20 30 420 430 440 450 460 470 mKIAA1 IMKQMLMDQRAQLMEHQKQQFLREQRQQQQQQQQQQQQQQQQQQILAEQQLQQPHL---P : :..: :.: :.: :.. ..:.:: :::. . . :. :. .. :: : mKIAA1 ---QSLLNQ--QMM--GKKQTLQRPTMEQKQQLLLQQQMLADAEKLSPQDQMNRHLTRPP 40 50 60 70 80 480 490 500 510 520 530 mKIAA1 RQHLQQQRNPYPVQQVNQFQGSPQDIAAVRNQVALQSMRASRLIAQNAGMMGMGPSQNPG .. .:.:: .: . :..:. . .. ::. . . . ... :...:. . .. mKIAA1 PDYKDQRRNTGTLQPAAQYSGGSSTVSLNSNQALTNPVSTHTILTPNSSLMSTSHGMRMP 90 100 110 120 130 140 540 550 560 570 580 590 mKIAA1 TMATAAAQSEIGLASYSAPPTSQPGMYNMNTGMTQMLQHSNQSGMGIPHNQSQGPRP-PA ..:. ..::. :. : .::: ::... :.:. :. : . . .:. :: : mKIAA1 LLSTV---QNIGM--YGNLPCNQPGTYNVTSTMNQLTQQRNTTQLITNQNNPLMSRPSPL 150 160 170 180 190 200 600 610 620 630 640 650 mKIAA1 SSQGVGMVSGFGQSMLVNSALSQQHQQLKGSVGQALPRPQGPPRLQSVMGTVQQGAQNWQ .... . :. :: ..:: :.: ::. .....: .. : ..:: :.. : :: mKIAA1 GANNGNNVATFG----AGSAGSSQ--QLRPNLAHSLS-GMSAQRSSTVMITANTTATNWA 210 220 230 240 250 660 670 680 690 700 mKIAA1 QRSLQGVPG---RTSGELGPFNNGASY-PLQAGQPRLTKQHFPQ-GLSQPVMDANTGAVR .. . : ...: : .. :.: : :. :: . .: : : ... : . . . .: mKIAA1 SQEVTGKQQEALKSTGVRFPTSTPAAYTPNQSLQPGVGSQPFSQRAVAPPSQLSPAVQMR 260 270 280 290 300 310 710 720 730 740 750 mKIAA1 TLNPA--AMGRQMMPTLAG-----QQSASQVRPLVMP---GLSQGVPGMPAFSQPPAQQQ .: :.. : . .: : .: :.: . : ::.. : .:::. mKIAA1 PMNQMNQALNGQTLGSLRGLNLRPNQLAAQSLSNMNPSGTGLNHPRTGT---NQPPS--- 320 330 340 350 360 760 770 780 790 800 810 mKIAA1 IAGGNFAASNQGQAYERTP--AQDMSYSYSGEGVGAAFPGLPDSTDLVDSIIKSGPG-DE .. . : .:::.. . : ..:..... .. . :.: ...:..::..:. :: :. mKIAA1 LTPNAFPSSNQSSRAFQGPDHGSDLAFDFLSQQSDSMCPALNSDADFIDSLLKTEPGNDD 370 380 390 400 410 420 820 mKIAA1 WMQE--LDELFGNP ::.. :::..:. mKIAA1 WMKDINLDEILGSNS 430 440 >>mKIAA0200 ( 1045 res) mpf00402 (1045 aa) initn: 593 init1: 175 opt: 413 Z-score: 197.7 bits: 47.9 E(): 7.2e-06 Smith-Waterman score: 1224; 30.998% identity (35.559% ungapped) in 842 aa overlap (1-825:294-1044) 10 20 30 mKIAA1 LANTVPEDDIQDLFNEDFEEKKEQEFSQTT : .::..:..:::.:::::::. : .. mKIAA0 IAGAGGSVAQSNLMPDLNLNEQEWKELIEELNRSVPDEDMKDLFTEDFEEKKDPEPPGSA 270 280 290 300 310 320 40 50 60 70 80 mKIAA1 METPLSQESVSVKSDASHSPFAHVSLGSPQARPSSSGPPF---STVSTGTNLPSVANTPG .:::.:. ...:.. : . : . .:::::.: .:.: : :.. .::. ::.... mKIAA0 TQTPLAQD-INIKTEFSPAAFEQEQLGSPQVRAGSAGQTFLGASSAPVGTDSPSLGSSQT 330 340 350 360 370 380 90 100 110 120 130 140 mKIAA1 AQNPASSPANCAVQSPQTPTQAHTPGQAPPRPGNGYLLNPVSVAVSGSGSGSVAGPSSDM . .:.:. .::. :..: . .. : .::.. ..: :. .:.. mKIAA0 LFHTTSQPG-VDNSSPNL-----MPASAQAQSAQRAL---TSVVLPSQGPGG----ASEL 390 400 410 420 150 160 170 180 190 200 mKIAA1 SPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQHSNQTSSWSPLGPPSSPY : :.::.:.::.:.. .:. :. :: .: ..:. :: :: mKIAA0 SSAHQLQQIAAKQKR-------------EQMLQNPQQAAPAPGPGQLATWQQAGPSHSPL 430 440 450 460 470 210 220 230 240 250 260 mKIAA1 GTAFASEKPNSPMMYPQAFNNQNTIVPAMANSLQKTTMNNYLPSNHMNMISQQ-PNNLGT . . ::: :: : : :.:.. .. .:. . . :: .: :..:.: :.::. mKIAA0 DVPYPMEKPASPSGYKQDFTNSKLLMMPGVNKSSPRPGGPYLQPSHSNLLSHQSPSNLNQ 480 490 500 510 520 530 270 280 290 300 310 320 mKIAA1 NSLNKQHNILTYGNTKPLTHFNADLSPRMTPPMANPNKTPLMPYIQQPQQSQQPQPQPPQ : .:.: ..: :::::::.:..:: . . : .. :: :: :. :: mKIAA0 NPVNNQGSVLDYGNTKPLSHYKADCG--QGGPGSGQNKPALMAYL-------------PQ 540 550 560 570 580 330 340 350 360 370 380 mKIAA1 QQPPPPPQLQAPRAHLSEDQKRMLLIKQKGVMNPPMAYAALPAHGQEQHAVGIPRTTGPM : : :::..:. ..:.: : . : . .: ::::. ..: ...: mKIAA0 QLP-----------HLSNEQNSLFLMKPK---SGNMPFRSLVPPGQEQNPSSVP-VAAPA 590 600 610 620 390 400 410 420 430 440 mKIAA1 QN--SVPSGSGSMVSGASPGGLGFLGSQPQAAIMK--QMLMDQRAQLMEHQKQQFLREQR . . :. : . . ..:: .:.:: :::.:: :.:.::. : . :.:::: :: mKIAA0 ASVGTQPTVSVASTHNSSP----YLSSQQQAAVMKQHQLLLDQQKQREQLQQQQFL--QR 630 640 650 660 670 680 450 460 470 480 490 500 mKIAA1 QQQQQQQQQQQQQQQQQQILAEQQLQQPHLPRQHLQQQRNPYPVQQVNQFQGSPQDIAAV :. .:..:: :.. : .: : :. . .. .: :::.:: : :. . mKIAA0 QHLLAEQEKQQFQRH---------LTRP--PPQYQDPTQSTFP-QQVGQFTG-PSAAVPG 690 700 710 720 510 520 530 540 550 560 mKIAA1 RNQVALQSMRASRLIAQNAGMMGMGPSQNP-GTMATAAAQSEIGLASYSAPPT-SQPGMY :... .. :.. : . .:.:::.. : ... ....:.. :.:.... . : ..: mKIAA0 MNNLGPSNSSCPRVFPQPGTLMSMGPGHAPVSSLPSSSGQQDRGVAQFTGSQSLPQNSLY 730 740 750 760 770 780 570 580 590 600 610 620 mKIAA1 NMNTGMTQMLQHSNQSGMGIPHNQSQGPRPPASSQGVGMVSGFGQSMLVNSALSQQHQQL .: .:..:.. . .. . .... :: .:... ...::. : ...:::::. mKIAA0 GMASGLAQIVAQPPPQATS---THAHIPRQTNVGQNASTSAAYGQNSLGSASLSQQHS-- 790 800 810 820 830 840 630 640 650 660 670 mKIAA1 KGSVGQALPRPQGPPRLQSVMGTVQQGAQNWQQRSLQGVPGRTSGE--LGPFNNGASYPL ::.. .: .:: ::....::. :.: .::.... .. ..:::. ..::. . :. . mKIAA0 KGTLPPGLTKPQ-VPRVSAAMGS--QNA-SWQHQGMPNLSSQTSGNSSVNPFTAAPSFHI 850 860 870 880 890 680 690 700 710 720 730 mKIAA1 QAGQPRLTKQHFPQGL-SQPVMD-ANTGAVRTLNP--AAMGRQMMPTLAGQQSASQVRPL : .. .:. :.: :.. :.:. ...::. . : .:. :. :. : :.: : mKIAA0 QQAHLKLAGQQFSQAMPSRPMAPLSSAGAAGPMLPPVSAQQRNSAPASAPPQAAPQQG-- 900 910 920 930 940 950 740 750 760 770 780 790 mKIAA1 VMPGLSQGVPGMPAFSQPPAQQQIAGGNFAASNQGQAYE-RTPAQDMSYSYSGEGVGAAF .:::: . : . ::.: :..: ..: . . .::: :: .:.. ..:::. .... mKIAA0 -LPGLSPSGPELGAFGQSPTSQ-MSGR--PGLHCAQAYPVRTMGQELPFAYSGQPGSSGL 960 970 980 990 1000 1010 800 810 820 mKIAA1 PGLPDSTDLVDSIIKSGPGDEWMQELDELFGNP .. :::.::..:. ..::..:::.:.:. mKIAA0 SSVAGHTDLIDSLLKNRTSEEWINELDDLLGSQ 1020 1030 1040 >>mFLJ00386 ( 769 res) mbe05021 (769 aa) initn: 587 init1: 206 opt: 373 Z-score: 182.2 bits: 44.6 E(): 5.3e-05 Smith-Waterman score: 389; 28.538% identity (30.867% ungapped) in 424 aa overlap (356-768:110-512) 330 340 350 360 370 380 mKIAA1 QQQPPPPPQLQAPRAHLSEDQKRMLLIKQKGVMNPPMAYAALPAHGQEQHAVGIPRTTGP : .: : ..: .: : :. : mFLJ00 ARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIGMPPRGPGQSLGGMG-GLGA 80 90 100 110 120 130 390 400 410 420 430 440 mKIAA1 MQNSVP-SGSGSM-VSGASPGGLGFLGSQ-PQAAI-MKQMLMDQRAQLMEHQKQQFLREQ : . .: ::. .:: .: :.. ... ::. . ..:. ..:. : ..:.::: ..: mFLJ00 MGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVALQQQQQ--QQQQQQFQQQQ 140 150 160 170 180 190 450 460 470 480 490 mKIAA1 ---RQQQQQQQQQQQQQQQQQQILAEQQLQQPHLPRQHLQQQRNPYPVQQVNQFQGSPQD .:::::::::::::: : : : :: : . .:.::::.. . .... :.. :. mFLJ00 AALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQQQHLIKLHH-QSQQQQ 200 210 220 230 240 250 500 510 520 530 540 550 mKIAA1 IAAVRNQVALQSMRASRLIAQNAGMMGMGPSQNPGTMATAAAQSEIGLASYSAPPTSQPG : .: :: : .: :. .. .. . .: . . : . :: :: mFLJ00 I----QQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQ--------PPPSQAL 260 270 280 290 300 560 570 580 590 600 610 mKIAA1 MYNMNT-GMTQMLQHSNQSGMGIPHNQSQGPRPPASSQGVGMVSGFGQSMLVNSALSQQH ... : : :. .. : :.: :. : .::. .:: .:. : . : . mFLJ00 PQQLSQLHHPQHHQPPPQAQQS-PIAQNQPPQIPPQSQSQPLVSQ-AQA-LPGPMLYAAQ 310 320 330 340 350 360 620 630 640 650 660 670 mKIAA1 QQLKG-SVGQALPRPQGPPRLQSVMGTVQQGAQNWQQRSLQGV-PGRTSGELGPFNNGAS :::: . ... .:: :..:.:. :: : .: : : :: .. . .. mFLJ00 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP 370 380 390 400 410 420 680 690 700 710 720 730 mKIAA1 YPLQAGQPRLTKQHFPQGLSQPVMDANTGAVRTLNPAAMGRQMMPTLAGQQSASQVRPLV : : : . :: :: . :... . .:: ...:. . : : : : . mFLJ00 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNV--SSGPAPSPSSFLPSPSPQPSQSPVTART 430 440 450 460 470 740 750 760 770 780 790 mKIAA1 MPGLSQGVPG-MPAFSQPPAQQQIAGGNFAASNQGQAYERTPAQDMSYSYSGEGVGAAFP ..: :: . . .: . .. ::.. : .: mFLJ00 PQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNE 480 490 500 510 520 530 800 810 820 mKIAA1 GLPDSTDLVDSIIKSGPGDEWMQELDELFGNP mFLJ00 DRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDL 540 550 560 570 580 590 >>mKIAA0192 ( 1146 res) msp04171 (1146 aa) initn: 812 init1: 232 opt: 285 Z-score: 142.2 bits: 37.7 E(): 0.0089 Smith-Waterman score: 327; 25.322% identity (28.993% ungapped) in 466 aa overlap (91-531:710-1141) 70 80 90 100 110 mKIAA1 ARPSSSGPPFSTVSTGTNLPSVANTPGAQNPASSPANCAVQSPQTPTQAHTPGQAPP--- :: . . ..:. : .. :: ::: mKIAA0 RLLLYHTHLRPRPRAYYLEPLPLPPEDEEPPAPALLEPEKKAPEPP-KTDKPGAAPPSTE 680 690 700 710 720 730 120 130 140 150 160 170 mKIAA1 ----RPGNGYLLN-PVSVAVS-GSGSGSVAGPSSDMSPAEQLKQMAAQQQQRAKLMQQKQ . .: . :.. . : : : .:: . : . :.. :. . ..: mKIAA0 ERKKKSTKGKKRSQPATKNEDYGMGPGR-SGPYGVTVPPDLLHH--ANPGSISHL----- 740 750 760 770 780 790 180 190 200 210 220 230 mKIAA1 QQQQQQQQQQQQQQQQQQHSNQTSSWSPLGPPSSPYGTAFASEKPNSPMMYPQAFNNQNT . .:... :.: . ... . :. : . : .:. : . : .... mKIAA0 SYRQSSMGLYTQNQPLPAGGPRVDPYRPVRLPMQKLPT-----RPTYPGVLPTTMSTVMG 800 810 820 830 840 240 250 260 270 280 mKIAA1 IVPA-----MANSLQKTTMNNYLPSNHMNMISQQPNNLGTNSLNKQHNILTYGNTKPLTH . :. . . : :. .. .... :. . :: .:.... .:: . mKIAA0 LEPSSYKTSVYRQQQPTVPQGQRLRQQLQAKIQSQGMLGQSSVHQMTPSSSYG-LQTSQG 850 860 870 880 890 900 290 300 310 320 330 mKIAA1 FNADLSPRMTPPMANPNKTPLMP-YIQQPQQSQQPQPQP----P----QQQPPPPPQLQA ... .: ..: : . : : .:: :: .:. .: : ::.: . :: mKIAA0 YTSYVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQA 910 920 930 940 950 960 340 350 360 370 380 390 mKIAA1 PR-AH-LSEDQKRMLLIKQKGVMNPPMAYAALPAHGQEQHAVGIPRTTGPMQNSVPSGSG : .: :. :. .... ... :: . : .: .: :. :.:. . : . mKIAA0 PTYGHGLTSTQR----FSHQTLQQTPMMGTMTPLSAQGVQA-GV-RSTSIL----PEQQQ 970 980 990 1000 1010 400 410 420 430 440 450 mKIAA1 SMVSGASPGGLGFLGSQPQAAIMKQMLMDQRAQLMEHQKQQFLREQRQQQQQQQQQQQQQ .. . . .: : ..:. ..: ...:.::.::.:.::::::::::::: mKIAA0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQQMLRQQQQQQQQQQQQQQQQ 1020 1030 1040 1050 1060 1070 460 470 480 490 500 510 mKIAA1 QQQQQILAEQQLQQPHLPRQHLQQQRNPYPVQQVNQFQGSPQDIAAVRNQVALQSMRASR ::::: .:: :::: :. :: : : : .: : . : . ...: :. : mKIAA0 QQQQQ---QQQQQQPH---QQQQQAAPPQPQPQ-SQPQFQRQGLQQTQQQ--QQTAALVR 1080 1090 1100 1110 1120 520 530 540 550 560 570 mKIAA1 LIAQNAGMMGMGPSQNPGTMATAAAQSEIGLASYSAPPTSQPGMYNMNTGMTQMLQHSNQ . :. . :: : mKIAA0 QLQQQLSNTQPQPSTNIFGRY 1130 1140 826 residues in 1 query sequences 1768191 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:53:46 2006 done: Mon Mar 27 10:53:48 2006 Scan time: 0.920 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]