FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA2001.ptfa, 745 aa vs ./tmplib.26680 library 1768272 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.4307+/-0.00729; mu= -5.6794+/- 0.483 mean_var=284.2611+/-67.845, 0's: 0 Z-trim: 11 B-trim: 0 in 0/36 Lambda= 0.0761 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1051 ( 549 res) mbp04321 ( 549) 320 49 2e-06 mKIAA1318 ( 1157 res) mbp08057 (1157) 248 41 0.0008 mFLJ00158 ( 236 res) msk05209 ( 236) 230 38 0.001 mKIAA1106 ( 1211 res) mbg00011 (1211) 221 38 0.0064 >>mKIAA1051 ( 549 res) mbp04321 (549 aa) initn: 385 init1: 265 opt: 320 Z-score: 207.9 bits: 48.7 E(): 2e-06 Smith-Waterman score: 329; 28.873% identity (33.469% ungapped) in 284 aa overlap (256-520:170-433) 230 240 250 260 270 280 mKIAA2 PEEEEEEEEEVPFLCWPPPRTDPEYVSDDLLINVVQDYTNPDGSSDPPLSPSPSQPELHS :.. ..:. . : ..: ..: :.: :: mKIAA1 DINNFDEDMNRQFENMNLLDQVELLAQSYSLLDHLDDFDDDDEDDD--FDPEPDQDEL-- 140 150 160 170 180 190 290 300 310 320 330 mKIAA2 PMLKE------------PTFEFLLPPLERPDI-EPFSGDPVYLAEFLMQLETFIADHEDH : .. : .:. :. : :.:.: .:. :..: . :. mKIAA1 PEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEKFDGNPDMLGPFMYQCQLFMEKSTRD 200 210 220 230 240 250 340 350 360 370 380 390 mKIAA2 FPGGAERVAFLISFFTGEARDWAISVTQEGSSLHANFPRFLDEIRKEFCGPIPSRVAKKA : :: :. :.. :.: :: . :. . : :. :. :... : : ..::. mKIAA1 FSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELKHVFEDPQRREAAKRK 260 270 280 290 300 310 400 410 420 430 440 450 mKIAA2 IRKLKQGNCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEIFRKELLWSTEVADLDEL ::.:.:: . .:..:::..:: :.: . :..:: .::. .: :: . : : mKIAA1 IRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIRAELSRQEAPKTLAAL 320 330 340 350 360 370 460 470 480 490 500 510 mKIAA2 ILECVKIERKVRVPKTASLTGVQNSCCPFALI--PNEDENEGVEFYSENEGEGEEAGGYR : :..::: :. . :. .. . : ::. :: . . : .:: : mKIAA1 ITACIHIER--RLARDAA---AKPDPSPRALVMPPNSQTDPT-----------EPVGGAR 380 390 400 410 520 530 540 550 560 mKIAA2 LYL----KDQRQHMTAFPQEMREEEEEMRKEEDEMEDEEDEDEDEDYEFEEEDEDDDDEE . : :..:..:. mKIAA1 MRLSKEEKERRRKMNLCLYCGNGGHFADGPSATGPERIRSPPSEASTQHLQVMLQIHMPG 420 430 440 450 460 470 >>mKIAA1318 ( 1157 res) mbp08057 (1157 aa) initn: 242 init1: 171 opt: 248 Z-score: 161.0 bits: 41.1 E(): 0.0008 Smith-Waterman score: 255; 22.449% identity (24.644% ungapped) in 539 aa overlap (16-529:631-1146) 10 20 30 40 mKIAA2 ERSRGSQWAPSVPEGPPLRGARVAELKRREGS-LSARFFLDRSC- : :. : : .: ..: . .: mKIAA1 PHMTTTASGVMTMSPMKTSVPVSESATLLRPTDSGVMSIPLTRTPASRAKSRPQMATACG 610 620 630 640 650 660 50 60 70 80 90 mKIAA2 -RSPFPPTLPASVGVTSASV---SSVSCACRLQVPSCCLLSL---RPLPRGNASRTEPLW :.: ::..:.. . : .: . . :. :: .. : : .. . : mKIAA1 DMCPLPVRAPATAGISPSPVRSPASSTLSTLLRRPSDGAVTAELERVLGPAQFAAMTPGE 670 680 690 700 710 720 100 110 120 130 140 150 mKIAA2 VWPGLACAGSPCRRTLVSSHAHLLISASSCTPHNSLPPSAQHSKPQELVTMSEAAG---- . : :..: :. . :. : . ::. : : : :.:.. mKIAA1 MSKPLMRASAPGTTTMPLMSP--MTSGEMSMPLMKTTPSGTMSTLQTKVMSSRATSLPQP 730 740 750 760 770 160 170 180 190 200 210 mKIAA2 -NLNSLRLANVALREELNALRGENVQLGLQLGRALAEVNSLRGNVSSYIRWPMPIVPVLA : : .:: : .. : . . .. : .. . : ...:. . :. ..: . mKIAA1 RNAASGVIANPPQRAPASGA-GSTPLMRVS-GSGMMSTPLLGATASGGMSMPQ-MAPPTS 780 790 800 810 820 830 220 230 240 250 260 270 mKIAA2 EENFEFLLNETDPTPEEEEEEEEEVPFLCWPPPRTDPEYVSDDLLINVVQDYTNPDGSSD . : :. .:.: . . : . . ... . .: : ..: mKIAA1 GDMFSPLMR--SPAPGIMSTPQTAFGMT----PTLNVKATDSGEASTSHTRFTAPGSKST 840 850 860 870 880 280 290 300 310 320 mKIAA2 PPLSPSPSQPELHSPMLKE-PTFEFLLPP----LERPDIEPFSGDPVYLAEFL---MQLE : .. . ::...: :: :.: .: : ::. . :.. :: . :.. mKIAA1 PHMTSTA--PEMKTPPPKEVPSFGMLTPALCYLLEEQEAARGSSSVEEDAEEIDEEKQMK 890 900 910 920 930 940 330 340 350 360 370 380 mKIAA2 TFIADHEDHFPGGAERVAFLISFFTGEARDWAISVTQEGSSLHANFPRFLDEIRKEFCGP :. : .:..:::.:. : :. :.: . :. . .. :: . . . . mKIAA1 GFLDD--------SEKMAFLVSLHLGAAERWSILQMEVGNPISSDNKAFLRRSQGLYDSL 950 960 970 980 990 390 400 410 420 430 440 mKIAA2 IPSRVAKKAIRKLKQGNCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEIFRKEL--L . . .. . :::. .. .:: : .::. :::.: :...::.:::: .. . mKIAA1 SEIDILSAVLCHPKQGKKSVRQYATDFLLLARHLSWSDAILRTRFLEGLSEAVTTKMGRI 1000 1010 1020 1030 1040 1050 450 460 470 480 490 500 mKIAA2 WSTEVADLDELILECVKIERKVRVPKTASLTGVQNSCCPFALIPNEDENEGVEFYSENEG . ...: ::: . . : .. : .: : .:. : . :..: :. :... mKIAA1 FLKVAGSLKELIDRSLYTECQLAEEKDSS--GNSNQVVPTSCKRNNEEAMENELGSQQQT 1060 1070 1080 1090 1100 1110 510 520 530 540 550 560 mKIAA2 EGEEAGGYR-LYLKDQRQHMTAFPQEMREEEEEMRKEEDEMEDEEDEDEDEDYEFEEEDE : .. : :::.. . . .. ...:. mKIAA1 EEHQHVPKRCYYLKEHGDPQESLHDHLRQSAGLPKAPTNK 1120 1130 1140 1150 >>mFLJ00158 ( 236 res) msk05209 (236 aa) initn: 230 init1: 230 opt: 230 Z-score: 159.2 bits: 38.5 E(): 0.001 Smith-Waterman score: 230; 43.210% identity (43.210% ungapped) in 81 aa overlap (536-616:10-90) 510 520 530 540 550 560 mKIAA2 AGGYRLYLKDQRQHMTAFPQEMREEEEEMRKEEDEMEDEEDEDEDEDYEFEEEDEDDDDE :.:.. :.::.: :.:..: :::.:... : mFLJ00 KEQGNLKDVKQEEKKENEEEEKEEEEMEEEEEEEEEEKE 10 20 30 570 580 590 600 610 620 mKIAA2 EEEEEEEEEEDKEEEMKNEDSDENKYEEEDEVIVRVLEPEQEQEREEIEHEHVYVHEHIH :::::.:.:: .:::...:. .::. .:.. . : : .. .:.::.. :. mFLJ00 EEEEEQEQEEHQEEEQEEEEEEENQKVFQDQMEADVEESDDVEEEEEVDDEEEDEDDDYD 40 50 60 70 80 90 630 640 650 660 670 680 mKIAA2 AHVHTLAAHHHGLHGELMVMDEPVLVDTSTQTISSAIGYHAENYLGVSPSVMHSSRQRSQ mFLJ00 DDEEEDRMEVGAFSLAQGSSVFENTRTTSRKREALQGSAWQVSSEDVRWGTFPLGRLPGQ 100 110 120 130 140 150 >>mKIAA1106 ( 1211 res) mbg00011 (1211 aa) initn: 613 init1: 193 opt: 221 Z-score: 144.7 bits: 38.1 E(): 0.0064 Smith-Waterman score: 227; 43.529% identity (50.000% ungapped) in 85 aa overlap (529-602:148-232) 500 510 520 530 540 550 mKIAA2 NEGEGEEAGGYRLYLKDQRQHMTAFPQEMREEEEEMRKEEDEMEDEEDEDEDEDYEFE-- .:.: :..:.:.:.:.:::.:.: . . mKIAA1 ESDGTEDMDDKEEDDDEEFSEDNDEQGDDDDEDEVDREDEEEIEEEDDEDDDDDEDGDDV 120 130 140 150 160 170 560 570 580 590 600 mKIAA2 EEDEDDDDEEEEEEEEEEEDKEEEM------KNEDSDEN---KYEEEDEVIVRVLEPEQE ::.:.::::::::::::::.....: .. :.:.: .:.. ::.... : mKIAA1 EEEEEDDDEEEEEEEEEEENEDHQMSCTRIMQDTDKDDNNNDEYDNYDELVAKSLLNLGK 180 190 200 210 220 230 610 620 630 640 650 660 mKIAA2 QEREEIEHEHVYVHEHIHAHVHTLAAHHHGLHGELMVMDEPVLVDTSTQTISSAIGYHAE mKIAA1 IAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSELSLDLDSDVVRETVDSLKLLAQ 240 250 260 270 280 290 745 residues in 1 query sequences 1768272 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:57:28 2006 done: Mon Mar 27 10:57:29 2006 Scan time: 0.890 Display time: 0.090 Function used was FASTA [version 3.4t11 Apr 17, 2002]