# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj35218.fasta.nr -Q ../query/mKIAA1913.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1913, 548 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920810 sequences Expectation_n fit: rho(ln(x))= 5.5953+/-0.00019; mu= 10.6028+/- 0.011 mean_var=85.3363+/-16.483, 0's: 28 Z-trim: 30 B-trim: 0 in 0/66 Lambda= 0.138838 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81899273|sp|Q8C817.1|T200A_MOUSE RecName: Full= ( 491) 3168 644.4 2.3e-182 gi|26328381|dbj|BAC27929.1| unnamed protein produc ( 491) 3160 642.8 6.9e-182 gi|149039673|gb|EDL93835.1| rCG57409, isoform CRA_ ( 485) 3043 619.3 7.8e-175 gi|149722944|ref|XP_001504320.1| PREDICTED: transm ( 491) 2907 592.1 1.2e-166 gi|119901437|ref|XP_589121.2| PREDICTED: similar t ( 491) 2867 584.1 3.2e-164 gi|194035417|ref|XP_001927918.1| PREDICTED: transm ( 491) 2864 583.5 4.9e-164 gi|194377350|dbj|BAG57623.1| unnamed protein produ ( 367) 2176 445.6 1.2e-122 gi|82077799|sp|Q5RGQ8.1|T200A_DANRE RecName: Full= ( 497) 2004 411.2 3.5e-112 gi|189540635|ref|XP_001340900.2| PREDICTED: simila ( 266) 551 120.0 8.9e-25 gi|189537097|ref|XP_001342745.2| PREDICTED: simila ( 453) 539 117.7 7.1e-24 gi|47228493|emb|CAG05313.1| unnamed protein produc ( 166) 518 113.2 6e-23 gi|149412488|ref|XP_001508831.1| PREDICTED: hypoth ( 642) 507 111.4 7.9e-22 gi|47219138|emb|CAG01801.1| unnamed protein produc ( 665) 469 103.8 1.6e-19 gi|224046099|ref|XP_002193569.1| PREDICTED: hypoth ( 543) 403 90.6 1.3e-15 gi|126321819|ref|XP_001364637.1| PREDICTED: simila ( 660) 370 84.0 1.5e-13 gi|82995005|ref|XP_892179.1| PREDICTED: similar to ( 637) 354 80.8 1.3e-12 gi|148706395|gb|EDL38342.1| mCG18208 [Mus musculus ( 259) 346 78.9 2e-12 gi|218675767|gb|AAI69201.2| hypothetical protein L ( 348) 342 78.2 4.4e-12 gi|118101598|ref|XP_425776.2| PREDICTED: similar t ( 402) 340 77.8 6.5e-12 gi|205830737|sp|A6NKL6.2|TTMA_HUMAN RecName: Full= ( 621) 342 78.4 6.9e-12 gi|47223049|emb|CAG07136.1| unnamed protein produc ( 410) 336 77.0 1.1e-11 gi|119916256|ref|XP_001254415.1| PREDICTED: hypoth ( 592) 334 76.8 2e-11 gi|125809373|ref|XP_001338484.1| PREDICTED: simila ( 403) 331 76.0 2.3e-11 gi|114672382|ref|XP_529940.2| PREDICTED: similar t ( 551) 330 75.9 3.3e-11 gi|224081288|ref|XP_002188938.1| PREDICTED: simila ( 414) 323 74.4 7e-11 gi|40352905|gb|AAH64538.1| TMEM200B protein [Homo ( 306) 309 71.5 3.9e-10 gi|74736342|sp|Q69YZ2.1|T200B_HUMAN RecName: Full= ( 307) 309 71.5 3.9e-10 gi|73950499|ref|XP_854805.1| PREDICTED: hypothetic ( 307) 307 71.1 5.1e-10 gi|126328826|ref|XP_001373498.1| PREDICTED: hypoth ( 308) 306 70.9 5.9e-10 gi|119888699|ref|XP_590778.3| PREDICTED: similar t ( 307) 299 69.5 1.6e-09 gi|119622046|gb|EAX01641.1| hCG1646228 [Homo sapie ( 152) 200 49.5 0.00084 gi|118111451|ref|XP_001232592.1| PREDICTED: simila ( 80) 191 47.5 0.0018 gi|210097938|gb|EEA46058.1| hypothetical protein B ( 241) 192 48.0 0.0036 gi|210097943|gb|EEA46063.1| hypothetical protein B ( 241) 189 47.4 0.0055 gi|210096088|gb|EEA44239.1| hypothetical protein B ( 362) 191 48.0 0.0057 >>gi|81899273|sp|Q8C817.1|T200A_MOUSE RecName: Full=Tran (491 aa) initn: 3168 init1: 3168 opt: 3168 Z-score: 3430.4 bits: 644.4 E(): 2.3e-182 Smith-Waterman score: 3168; 100.000% identity (100.000% similar) in 491 aa overlap (58-548:1-491) 30 40 50 60 70 80 mKIAA1 RCRDSCESEEPGEATGAPRPGAQDRAQEETMIATGGVITGLAALKRQDSARSQQHINLSP :::::::::::::::::::::::::::::: gi|818 MIATGGVITGLAALKRQDSARSQQHINLSP 10 20 30 90 100 110 120 130 140 mKIAA1 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLAATTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLAATTL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 ASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 ASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKAS 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVP 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 LPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHL 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 LSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI 400 410 420 430 440 450 510 520 530 540 mKIAA1 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF ::::::::::::::::::::::::::::::::::::::::: gi|818 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF 460 470 480 490 >>gi|26328381|dbj|BAC27929.1| unnamed protein product [M (491 aa) initn: 3160 init1: 3160 opt: 3160 Z-score: 3421.7 bits: 642.8 E(): 6.9e-182 Smith-Waterman score: 3160; 99.796% identity (99.796% similar) in 491 aa overlap (58-548:1-491) 30 40 50 60 70 80 mKIAA1 RCRDSCESEEPGEATGAPRPGAQDRAQEETMIATGGVITGLAALKRQDSARSQQHINLSP :::::::::::::::::::::::::::::: gi|263 MIATGGVITGLAALKRQDSARSQQHINLSP 10 20 30 90 100 110 120 130 140 mKIAA1 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLAATTL ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|263 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEEKQNGSPCASRLAATTL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 ASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKAS 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVP 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 LPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHL 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 LSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI 400 410 420 430 440 450 510 520 530 540 mKIAA1 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF ::::::::::::::::::::::::::::::::::::::::: gi|263 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF 460 470 480 490 >>gi|149039673|gb|EDL93835.1| rCG57409, isoform CRA_a [R (485 aa) initn: 2922 init1: 2117 opt: 3043 Z-score: 3295.2 bits: 619.3 E(): 7.8e-175 Smith-Waterman score: 3043; 96.945% identity (98.167% similar) in 491 aa overlap (58-548:1-485) 30 40 50 60 70 80 mKIAA1 RCRDSCESEEPGEATGAPRPGAQDRAQEETMIATGGVITGLAALKRQDSARSQQHINLSP :::::::::::::::::::::::::::::: gi|149 MIATGGVITGLAALKRQDSARSQQHINLSP 10 20 30 90 100 110 120 130 140 mKIAA1 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|149 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIVGIAMAVLGYWPQKEHF 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLAATTL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|149 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDAEVKQNGSPCASRLAATTL 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 ASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKAS :::::::::::::::::::::::::::: :::::::::::::::::::::::.::::.: gi|149 ASFSGMRNSFRVDSSVEEDELMLTESKSPRHLMPPLLSDSAVSVFGLYPPPAKTTDDKTS 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVP ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKSRSRNLSMDSLVVP 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 LPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHL :::::: :: ::::::::::::::::::::: :::::::::::::::::::::::: gi|149 LPSSGE---PASTLLPRNNSVGESLSSQYKSSV---PGTGQLLSPGAARRQFGSNTSLHL 340 350 360 370 380 450 460 470 480 490 500 mKIAA1 LSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|149 LSSHSKSLDLDRGPSTLTVQAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI 390 400 410 420 430 440 510 520 530 540 mKIAA1 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF ::::::::::::::::::::::::::::::::::::::::: gi|149 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF 450 460 470 480 >>gi|149722944|ref|XP_001504320.1| PREDICTED: transmembr (491 aa) initn: 2907 init1: 2907 opt: 2907 Z-score: 3147.9 bits: 592.1 E(): 1.2e-166 Smith-Waterman score: 2907; 89.613% identity (98.371% similar) in 491 aa overlap (58-548:1-491) 30 40 50 60 70 80 mKIAA1 RCRDSCESEEPGEATGAPRPGAQDRAQEETMIATGGVITGLAALKRQDSARSQQHINLSP :::::::::::::::::::::::.:.:::: gi|149 MIATGGVITGLAALKRQDSARSQHHVNLSP 10 20 30 90 100 110 120 130 140 mKIAA1 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF ::.:..:::::::::::::::::::::::::::::::::.::.:::::::::::::::: gi|149 SPAAQEKKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLISIVGIAMAVLGYWPQKEHF 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|149 IDAETTLSTNETQVIRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLAATTL ::::::::::::::::::::::::.::::. ::.:.::.:.:::::::: :.:::::.:. gi|149 RDKETKIIHMRDIYSTVIDIHTLRIKEQKHMNGIYTGLMGETEVKQNGSSCTSRLAANTI 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 ASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKAS :::::.:.:::.:::::::::.:.:::::::::::: :::.::::::::::.:.::::.: gi|149 ASFSGFRSSFRMDSSVEEDELVLNESKSLGHLMPPLSSDSSVSVFGLYPPPSKTTDDKTS 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVP . :::.:::::::::::::::::::::::::::::::::: :.:::.::::::::::::: gi|149 GPKKCETKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEDAENLKSRSRNLSMDSLVVP 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 LPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHL ::...:::::. :.:::::::::::::::::::::: :.::::::::::::::::::::: gi|149 LPNTAESFQPVSTMLPRNNSVGESLSSQYKSSVALGAGAGQLLSPGAARRQFGSNTSLHL 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 LSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI :::::::::::::::::::.::::::::::::::::::::..::::::::.::::::..: gi|149 LSSHSKSLDLDRGPSTLTVQAEQRKHPSWPRLDRSNSKGYVKLENKEDPMERLLVPQATI 400 410 420 430 440 450 510 520 530 540 mKIAA1 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF ::::::::::.:::::::::::::::::::::::::::::: gi|149 KKDFTNKEKLIMISRSHNNLSFEHDEFLSNNLKRGTSETRF 460 470 480 490 >>gi|119901437|ref|XP_589121.2| PREDICTED: similar to tr (491 aa) initn: 2867 init1: 2867 opt: 2867 Z-score: 3104.6 bits: 584.1 E(): 3.2e-164 Smith-Waterman score: 2867; 88.187% identity (97.760% similar) in 491 aa overlap (58-548:1-491) 30 40 50 60 70 80 mKIAA1 RCRDSCESEEPGEATGAPRPGAQDRAQEETMIATGGVITGLAALKRQDSARSQQHINLSP :::::::::::::::::::::::.:.:::: gi|119 MIATGGVITGLAALKRQDSARSQHHVNLSP 10 20 30 90 100 110 120 130 140 mKIAA1 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF ::.:..:::::::::::::::::::::::::::::::::.::.:::::::::::::::: gi|119 SPAAQEKKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLISIVGIAMAVLGYWPQKEHF 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|119 IDAETTLSTNETQVIRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLAATTL ::::::::::::::::::::::::.::::. ::.:.::.:.:::::::. :::::::.:. gi|119 RDKETKIIHMRDIYSTVIDIHTLRIKEQKHMNGIYTGLMGETEVKQNGNSCASRLAANTI 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 ASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKAS :::::.:.:::.:::::::::...::::.:::.:::::::..:: ::::::.:.::::.: gi|119 ASFSGFRSSFRMDSSVEEDELVVNESKSFGHLVPPLLSDSSASVCGLYPPPSKTTDDKTS 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVP . :::.::::::::::::::::::::::::::::::.::: :::::.::::::::::.:: gi|119 GPKKCETKSIVSSSISAFTLPVIKLNNCVIDEPSIDNITEDADNLKSRSRNLSMDSLMVP 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 LPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHL ::. .. :::. .::::::::::::::::::::::::.::::::::::::::::::::: gi|119 LPNPSQPFQPVSLMLPRNNSVGESLSSQYKSSVALGPGAGQLLSPGAARRQFGSNTSLHL 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 LSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI ::::::::::.:: :::::.::::::::::::::::::::..::::::::.::::::.:: gi|119 LSSHSKSLDLERGHSTLTVQAEQRKHPSWPRLDRSNSKGYVKLENKEDPMERLLVPQAAI 400 410 420 430 440 450 510 520 530 540 mKIAA1 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF ::::::::::::::::::::::::::::::::::::::::: gi|119 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF 460 470 480 490 >>gi|194035417|ref|XP_001927918.1| PREDICTED: transmembr (491 aa) initn: 2864 init1: 2864 opt: 2864 Z-score: 3101.3 bits: 583.5 E(): 4.9e-164 Smith-Waterman score: 2864; 87.373% identity (98.167% similar) in 491 aa overlap (58-548:1-491) 30 40 50 60 70 80 mKIAA1 RCRDSCESEEPGEATGAPRPGAQDRAQEETMIATGGVITGLAALKRQDSARSQQHINLSP :::::::::::::::::::::::.:.:::: gi|194 MIATGGVITGLAALKRQDSARSQHHVNLSP 10 20 30 90 100 110 120 130 140 mKIAA1 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF ::.:..:::::::::::::::::::::::::::::::::.::.:::::::::::::::: gi|194 SPAAQEKKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLISIVGIAMAVLGYWPQKEHF 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 IDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN ::::::::::::.:.::::::::::::::::::::::::::::::::::::::::::::: gi|194 IDAETTLSTNETEVIRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHEN 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 RDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLAATTL ::::::::::::::::::::::::.::::. ::.:.::.:.:::::::. :::::::.:. gi|194 RDKETKIIHMRDIYSTVIDIHTLRIKEQKHMNGIYTGLMGETEVKQNGNSCASRLAANTI 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 ASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKAS :::::.:.:::.:::::::::...::::::::.::::::...:: ::::::.:...::.: gi|194 ASFSGFRSSFRMDSSVEEDELVINESKSLGHLIPPLLSDNSASVCGLYPPPSKTAEDKSS 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 SSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVP . :::.::::::::::::::::::::::::::::::.::: ::.::.::::::::::..: gi|194 GPKKCETKSIVSSSISAFTLPVIKLNNCVIDEPSIDNITEDADTLKSRSRNLSMDSLMLP 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 LPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHL ::.:.. :::. .::::::.:::::::::::::::::.::::::::::::::::::::: gi|194 LPNSSQPFQPVSMILPRNNSIGESLSSQYKSSVALGPGAGQLLSPGAARRQFGSNTSLHL 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 LSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAI :::::::::::::::::::.:::::::::::::::::::::.:::::::..::::::.:. gi|194 LSSHSKSLDLDRGPSTLTVQAEQRKHPSWPRLDRSNSKGYMKLENKEDPVERLLVPQAAV 400 410 420 430 440 450 510 520 530 540 mKIAA1 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF ::::::::::::::::::::::::::::::::::::::::: gi|194 KKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF 460 470 480 490 >>gi|194377350|dbj|BAG57623.1| unnamed protein product [ (367 aa) initn: 2176 init1: 2176 opt: 2176 Z-score: 2358.3 bits: 445.6 E(): 1.2e-122 Smith-Waterman score: 2176; 89.646% identity (98.638% similar) in 367 aa overlap (182-548:1-367) 160 170 180 190 200 210 mKIAA1 TTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILHENRDKE :::::::::::::::::::::::::::::: gi|194 MKMLGPFTMGIGIFIFICANAILHENRDKE 10 20 30 220 230 240 250 260 270 mKIAA1 TKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLAATTLASFS ::::::::::::::::::::.:::.: ::.:.::.:.:::::::: :::::::.:.:::: gi|194 TKIIHMRDIYSTVIDIHTLRIKEQRQMNGMYTGLMGETEVKQNGSSCASRLAANTIASFS 40 50 60 70 80 90 280 290 300 310 320 330 mKIAA1 GMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATDDKASSSKK :.:.:::.:::::::::::.:.:: :::::::::::.::::::::::.:.::::.:.::: gi|194 GFRSSFRMDSSVEEDELMLNEGKSSGHLMPPLLSDSSVSVFGLYPPPSKTTDDKTSGSKK 100 110 120 130 140 150 340 350 360 370 380 390 mKIAA1 CDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDSLVVPLPSS :.::::::::::::::::::::::::::::::.::: :::::.:::::::::::::::.. gi|194 CETKSIVSSSISAFTLPVIKLNNCVIDEPSIDNITEDADNLKSRSRNLSMDSLVVPLPNT 160 170 180 190 200 210 400 410 420 430 440 450 mKIAA1 GESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNTSLHLLSSH .:::::. :.::::::.:::::::::::.:::::.::::::::::::::::::::::::: gi|194 SESFQPVSTVLPRNNSIGESLSSQYKSSMALGPGAGQLLSPGAARRQFGSNTSLHLLSSH 220 230 240 250 260 270 460 470 480 490 500 510 mKIAA1 SKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMDRLLVPQTAIKKDF :::::::::::::::.::::::::::::::.::::::.:::::::::::::::.:::::: gi|194 SKSLDLDRGPSTLTVQAEQRKHPSWPRLDRNNSKGYMKLENKEDPMDRLLVPQVAIKKDF 280 290 300 310 320 330 520 530 540 mKIAA1 TNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF ::::::::::::::::::::::::::::::::::::: gi|194 TNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF 340 350 360 >>gi|82077799|sp|Q5RGQ8.1|T200A_DANRE RecName: Full=Tran (497 aa) initn: 1225 init1: 728 opt: 2004 Z-score: 2170.3 bits: 411.2 E(): 3.5e-112 Smith-Waterman score: 2004; 63.800% identity (83.800% similar) in 500 aa overlap (58-548:1-497) 30 40 50 60 70 80 mKIAA1 RCRDSCESEEPGEATGAPRPGAQDRAQEETMIATGGVITGLAALKRQDSARSQQHINL-S :::::::::::::::::::.::: :.. : gi|820 MIATGGVITGLAALKRQDSTRSQYHLSAQS 10 20 30 90 100 110 120 130 140 mKIAA1 PLPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEH : :: . .: ..:.:::::::::::::::: :::::.::::. . :::::::::::.:.. gi|820 PGPAPE-KKTTKRKPRADVVVVRGKIRLYSASGFFLVLGVLILMAGIAMAVLGYWPHKDQ 40 50 60 70 80 150 160 170 180 190 200 mKIAA1 FIDAETTLSTNETQVV-RNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAILH :: .:.:.:: :.:.: ...:.:::.::.::::::::::::::::::::::::: gi|820 PKAPETKMSANNTQSFGREQAGSIAQFLEQHMHSEKMKMLGPFTMGIGIFIFICANAILH 90 100 110 120 130 140 210 220 230 240 250 260 mKIAA1 ENRDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLG-DTEVKQNG--SPCASRL ::::.:::.:::::.::::::::.::.:::: .:: : : :::.. : : :::: gi|820 ENRDRETKVIHMRDMYSTVIDIHSLRIKEQKCTNGACMGPYGGDTEIRTFGLDSQFASRL 150 160 170 180 190 200 270 280 290 300 310 mKIAA1 AATTLASFSGMRNSFRVD---SSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPA ::.:: ::::. .. : . ::...:. ...:... :. : .: . .::. gi|820 AANTLMSFSGLDGDVRFSHRTSSADDDDGLMSEARGGFCLLSPTYKDRSECIFGFQDDGR 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA1 KATDDKASSSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNL .:. .. :::.:.:::::::::::::::::::::::::.:::::: .. ...:: gi|820 W--EDRRGALKKCQTRSIVSSSISAFTLPVIKLNNCVIDEPDIDSITEDLEQSRVHSRPP 270 280 290 300 310 320 380 390 400 410 420 430 mKIAA1 SMDSLVVPLPSSGESFQPAVTLLPRNNSVGESLSS-QYKSSVALGPGTGQLLSPGAARRQ ::.::.::.:. ...:.: . : :.::. :: :: . .::.. : .:..:::::::.. gi|820 SMESLTVPVPDIAKAFKPPGVQLLRSNSATESASSTSSRSSLSPGSTSGRFLSPGAARKD 330 340 350 360 370 380 440 450 460 470 480 490 mKIAA1 FGSNTSLHLLSSHSKSLDLDRGPSTLTVHAEQRKHPSWPRLDRSNSKGYMRLENKEDPMD ::::.:.:.::.:::::::.:::. :::. ::::::::::::::::::: :::::::::: gi|820 FGSNNSIHMLSAHSKSLDLERGPTKLTVQPEQRKHPSWPRLDRSNSKGYTRLENKEDPMD 390 400 410 420 430 440 500 510 520 530 540 mKIAA1 RLLVPQTAIKKDFTNKEKLLMISRSHNNLSFEHDEFLSNNLKRGTSETRF ::.:: . .:::.:.:::::::::::::::::::::.:..:::::::::: gi|820 RLIVPPVDVKKDYTKKEKLLMISRSHNNLSFEHDEFMSSGLKRGTSETRF 450 460 470 480 490 >>gi|189540635|ref|XP_001340900.2| PREDICTED: similar to (266 aa) initn: 639 init1: 308 opt: 551 Z-score: 601.2 bits: 120.0 E(): 8.9e-25 Smith-Waterman score: 622; 40.850% identity (63.399% similar) in 306 aa overlap (58-359:1-266) 30 40 50 60 70 80 mKIAA1 RCRDSCESEEPGEATGAPRPGAQDRAQEETMIATGGVITGLAALKRQDSARSQQHINLSP ::::::. : .:::: ::... . gi|189 MIATGGL---LRITRRQDSLRSKNRAE--- 10 20 90 100 110 120 130 140 mKIAA1 LPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVLVSIIGIAMAVLGYWPQKEHF .. .. .... . :::::.::..: : ::. ::::. ..:.::::::::: .. gi|189 ---NKKKRKAKKKRKNDVVVVKGKVQLCSGSGLVAALGVLILLVGVAMAVLGYWPVENTH 30 40 50 60 70 80 150 160 170 180 190 200 mKIAA1 IDAETTL----STNETQVVRNQGGVVVRFFEQHLHSDKMKMLGPFTMGIGIFIFICANAI : : : : .. : .. : .: .:.::..:.:::..::::::.::::::. gi|189 ATAGFTHNNESSFNSSSPVAHSLGFFQSLFGGYLQSDNLKVLGPLVMGIGIFLFICANAV 90 100 110 120 130 140 210 220 230 240 250 260 mKIAA1 LHENRDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLGDTEVKQNGSPCASRLA :::.:::.::::..:::::::::::.:: :. ::: . . . . .: .: : gi|189 LHEDRDKKTKIINLRDIYSTVIDIHSLRSKDCIPFNGLISHMQSKSGEGKNTTPRNS--- 150 160 170 180 190 270 280 290 300 310 320 mKIAA1 ATTLASFSGMRNSFRVDSSVEEDELMLTESKSLGHLMPPLLSDSAVSVFGLYPPPAKATD .: :::: : . .. .:. ::. :. : gi|189 -GKQRRLSCARNSFGKHS-------LCAKRQSF--------SDTIYSISG---------- 200 210 220 230 330 340 350 360 370 380 mKIAA1 DKASSSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEPSIDSITEVADNLKTRSRNLSMDS ... . .:.::::::..:::::::::::: ..: gi|189 --GGQEAQWETHSIVSSSLNAFTLPVIKLNNCEMQE 240 250 260 390 400 410 420 430 440 mKIAA1 LVVPLPSSGESFQPAVTLLPRNNSVGESLSSQYKSSVALGPGTGQLLSPGAARRQFGSNT >>gi|189537097|ref|XP_001342745.2| PREDICTED: similar to (453 aa) initn: 693 init1: 536 opt: 539 Z-score: 585.0 bits: 117.7 E(): 7.1e-24 Smith-Waterman score: 670; 33.769% identity (62.309% similar) in 459 aa overlap (98-527:7-443) 70 80 90 100 110 120 mKIAA1 LAALKRQDSARSQQHINLSPLPATQDQKPVRRRPRADVVVVRGKIRLYSPSGFFLILGVL ... . .::::.::..: : ::. .:.: gi|189 MIATGAKKKRKNEVVVVKGKLKLCSVSGLVAAVGIL 10 20 30 130 140 150 160 170 180 mKIAA1 VSIIGIAMAVLGYWPQKEHFIDAETTLSTNETQVVRNQGGVVVRFFEQHLHSDKMKMLGP : ..:::::::::::.. :..: . . :.. ..: . :. . :....:.:::.:..:: gi|189 VLLVGIAMAVLGYWPKESHLLDKDFNGSNGTAEVDSPKLGAFAAFINRYLYSDKLKVFGP 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 FTMGIGIFIFICANAILHENRDKETKIIHMRDIYSTVIDIHTLRLKEQKQANGLYAGLLG . ::::::.::::::.:::::::.::::..:::::::::::.:: :: :: ... gi|189 LIMGIGIFLFICANAVLHENRDKKTKIINLRDIYSTVIDIHSLRTKEPAPLNG-FVNYCQ 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 DTEVKQNGSPCASRLAATTLASFSGMRNSFRVD-SSVEEDELMLTESKSLGHLMPPLLSD . ..:. :: : .. . :: :.: ::. .. :...:: . :.: gi|189 SKDTKSYISPHKS---GSWPSPGSG-----RLDTSSMIPSRRPSTNQSSLDK---QSLTD 160 170 180 190 200 310 320 330 340 350 360 mKIAA1 SAVSVFGLYPPPAKATDDKASSSKKCDTKSIVSSSISAFTLPVIKLNNCVIDEP-SIDSI .. :.. :. :. ....:::.:..:::::...::: .: . :. gi|189 TVYSIY----------RDQKPELKQWESRTIVSTSVNAFTLPMMRLNNRGTSERRGSDKT 210 220 230 240 250 370 380 390 400 410 420 mKIAA1 TEVADN-LKTRSRNLSMDSLVVPLPSSGESFQPAVTL-LPRNNSVGESLSS---QYKSSV :. . : ... ...::. . . . : : : ..:. :: : : gi|189 GEAKREFLDAEAICRRLEDLVASRSMTKAKVESAQTHPEPPQDSLEVYRSSGSLQGAPRV 260 270 280 290 300 310 430 440 450 460 470 mKIAA1 ALGPGTGQLLSP-GAARRQFGSNTSLHLLSSHSKSLDLDR-GPSTLTVHAEQRKHPSWPR .: . .::. . ..: ::. :: ::..:.:.: : .: . . .. : :: gi|189 SLQGSQVKLLTQCSPSHRATGSHLSLSALSDYSRSIDEDICSPIPAERQQVRSRRLSCPR 320 330 340 350 360 370 480 490 500 510 mKIAA1 LDRSNSKGYMRLE---------------NKEDPM-----DRLLVPQTAIKKDFTNKEKLL :. . :: .:: ..:. . :. : . . .....:.::: gi|189 LEGLSCGGYTKLEGLGGESFESTDNATFSRESSVEVLEKDQELQTECGAVRQYSKKQKLL 380 390 400 410 420 430 520 530 540 mKIAA1 MISRSHNNLSFEHDEFLSNNLKRGTSETRF :.:.: ..: gi|189 MVSQSDTTLEDVEMDSMEI 440 450 548 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 09:37:03 2009 done: Mon Mar 16 09:44:19 2009 Total Scan time: 973.980 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]