# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj34062.fasta.nr -Q ../query/mKIAA0327.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0327, 933 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917202 sequences Expectation_n fit: rho(ln(x))= 5.5269+/-0.00019; mu= 12.1517+/- 0.011 mean_var=75.2913+/-15.082, 0's: 36 Z-trim: 79 B-trim: 1565 in 2/63 Lambda= 0.147809 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|13876342|gb|AAK26091.1| protocadherin gamma A8 ( 932) 6076 1305.6 0 gi|32451623|gb|AAH54555.1| Protocadherin gamma sub ( 932) 6067 1303.7 0 gi|50512412|gb|AAT77601.1| protocadherin gamma a8 ( 932) 5912 1270.6 0 gi|2190018|dbj|BAA20359.1| protocadherin 4 [Rattus ( 928) 5716 1228.8 0 gi|149017333|gb|EDL76384.1| rCG49295, isoform CRA_ ( 870) 5453 1172.7 0 gi|62510865|sp|Q5DRB2.1|PCDG8_PANTR RecName: Full= ( 932) 5148 1107.7 0 gi|37999835|sp|Q9Y5G5.1|PCDG8_HUMAN RecName: Full= ( 932) 5112 1100.0 0 gi|148743906|gb|AAI42515.1| PCDHGA8 protein [Bos t ( 932) 5053 1087.4 0 gi|13876344|gb|AAK26092.1| protocadherin gamma A9 ( 932) 4913 1057.6 0 gi|148678194|gb|EDL10141.1| mCG133388, isoform CRA ( 932) 4912 1057.4 0 gi|50512414|gb|AAT77602.1| protocadherin gamma a9 ( 931) 4816 1036.9 0 gi|62510864|sp|Q5DRB1.1|PCDG9_PANTR RecName: Full= ( 932) 4741 1020.9 0 gi|37999834|sp|Q9Y5G4.1|PCDG9_HUMAN RecName: Full= ( 932) 4736 1019.8 0 gi|55727383|emb|CAH90447.1| hypothetical protein [ ( 933) 4736 1019.8 0 gi|37999843|sp|Q9Y5H3.1|PCDGA_HUMAN RecName: Full= ( 936) 4546 979.3 0 gi|62510874|sp|Q5DRC1.1|PCDGA_PANTR RecName: Full= ( 936) 4532 976.3 0 gi|13876324|gb|AAK26082.1| protocadherin gamma A10 ( 930) 4523 974.4 0 gi|148678185|gb|EDL10132.1| mCG133388, isoform CRA ( 930) 4522 974.2 0 gi|50512392|gb|AAT77591.1| protocadherin gamma a10 ( 929) 4489 967.2 0 gi|148678182|gb|EDL10129.1| mCG133388, isoform CRA ( 935) 4483 965.9 0 gi|50417635|gb|AAH77712.1| Protocadherin gamma sub ( 935) 4482 965.7 0 gi|13876340|gb|AAK26090.1| protocadherin gamma A7 ( 935) 4476 964.4 0 gi|50512410|gb|AAT77600.1| protocadherin gamma a7 ( 934) 4475 964.2 0 gi|62510866|sp|Q5DRB3.1|PCDG7_PANTR RecName: Full= ( 932) 4465 962.0 0 gi|37999836|sp|Q9Y5G6.1|PCDG7_HUMAN RecName: Full= ( 932) 4453 959.5 0 gi|29436767|gb|AAH49814.1| Protocadherin gamma sub ( 930) 4417 951.8 0 gi|114602391|ref|XP_001149871.1| PREDICTED: simila ( 934) 4415 951.4 0 gi|148678175|gb|EDL10122.1| mCG133388, isoform CRA ( 930) 4410 950.3 0 gi|149017319|gb|EDL76370.1| rCG49295, isoform CRA_ ( 930) 4407 949.7 0 gi|62087496|dbj|BAD92195.1| protocadherin gamma su ( 895) 4405 949.2 0 gi|13876334|gb|AAK26087.1| protocadherin gamma A4 ( 930) 4403 948.8 0 gi|37999478|sp|O60330.1|PCDGC_HUMAN RecName: Full= ( 932) 4398 947.8 0 gi|119582340|gb|EAW61936.1| hCG1982215, isoform CR ( 932) 4398 947.8 0 gi|62510872|sp|Q5DRB9.1|PCDGC_PANTR RecName: Full= ( 932) 4395 947.1 0 gi|62510873|sp|Q5DRC0.1|PCDGB_PANTR RecName: Full= ( 935) 4392 946.5 0 gi|148678172|gb|EDL10119.1| mCG133388, isoform CRA ( 933) 4388 945.6 0 gi|37999842|sp|Q9Y5H2.1|PCDGB_HUMAN RecName: Full= ( 935) 4387 945.4 0 gi|62087434|dbj|BAD92164.1| protocadherin gamma su ( 961) 4387 945.4 0 gi|62510870|sp|Q5DRB7.1|PCDG3_PANTR RecName: Full= ( 932) 4384 944.8 0 gi|13876326|gb|AAK26083.1| protocadherin gamma A11 ( 933) 4384 944.8 0 gi|37999840|sp|Q9Y5H0.1|PCDG3_HUMAN RecName: Full= ( 932) 4383 944.6 0 gi|148678171|gb|EDL10118.1| mCG133388, isoform CRA ( 929) 4362 940.1 0 gi|13876328|gb|AAK26084.1| protocadherin gamma A12 ( 932) 4362 940.1 0 gi|50512394|gb|AAT77592.1| protocadherin gamma a11 ( 933) 4360 939.7 0 gi|149017337|gb|EDL76388.1| rCG49295, isoform CRA_ ( 869) 4357 939.0 0 gi|62510868|sp|Q5DRB5.1|PCDG5_PANTR RecName: Full= ( 931) 4357 939.0 0 gi|13876332|gb|AAK26086.1| protocadherin gamma A3 ( 928) 4355 938.6 0 gi|62510869|sp|Q5DRB6.1|PCDG4_PANTR RecName: Full= ( 931) 4354 938.4 0 gi|127139358|ref|NP_001076029.1| protocadherin gam ( 962) 4354 938.4 0 gi|149017344|gb|EDL76395.1| rCG49295, isoform CRA_ ( 933) 4349 937.3 0 >>gi|13876342|gb|AAK26091.1| protocadherin gamma A8 [Mus (932 aa) initn: 6076 init1: 6076 opt: 6076 Z-score: 6994.8 bits: 1305.6 E(): 0 Smith-Waterman score: 6076; 100.000% identity (100.000% similar) in 932 aa overlap (2-933:1-932) 10 20 30 40 50 60 mKIAA0 TMAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 MAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 LTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 LTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQRW 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 QKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 QKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 INQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 INQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA0 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 840 850 860 870 880 890 910 920 930 mKIAA0 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK ::::::::::::::::::::::::::::::::: gi|138 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 900 910 920 930 >>gi|32451623|gb|AAH54555.1| Protocadherin gamma subfami (932 aa) initn: 6067 init1: 6067 opt: 6067 Z-score: 6984.4 bits: 1303.7 E(): 0 Smith-Waterman score: 6067; 99.893% identity (99.893% similar) in 932 aa overlap (2-933:1-932) 10 20 30 40 50 60 mKIAA0 TMAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 MAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|324 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHGNTG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 LTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 LTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQRW 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 QKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 QKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 INQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 INQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA0 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 840 850 860 870 880 890 910 920 930 mKIAA0 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK ::::::::::::::::::::::::::::::::: gi|324 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 900 910 920 930 >>gi|50512412|gb|AAT77601.1| protocadherin gamma a8 [Rat (932 aa) initn: 5912 init1: 5912 opt: 5912 Z-score: 6805.8 bits: 1270.6 E(): 0 Smith-Waterman score: 5912; 96.459% identity (99.142% similar) in 932 aa overlap (2-933:1-932) 10 20 30 40 50 60 mKIAA0 TMAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL ::::.::::::::::.::::::::::.:::::::::::::::::::::::::::::::: gi|505 MAASQNQHRHGRLVLFCTLMGTLCKIGVGQIRYSVPEETDKGTVVGNISKDLGLEPREL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV ::::::::::::::::::::::::::::.::::::::::: ::::::::::::::::::: gi|505 AERGVRIVSRGRSQLFSLNPRGGSLVTASRIDREELCAQSIPCLVNINILVEEKGKLFGV 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|505 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPKAVDPDVGINSLQSYQLSPNRHFS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA : .: :::::::::::::.::::::::.:::::::::::.::::::::::.::::::::: gi|505 LDIQRGDDGTINPELVLEHTLDREEEPSHHLVLTASDGGDPRRSSTALIQVTVLDTNDNA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG :::::::::::::::::::::::::::::::::.::::::::.:::.::::::::::::: gi|505 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGANGKVTYKFQKINDKQSLLFHLHENTG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|505 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVVIMVEDVNDNRPEVTITSLFNPVLEN 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: :: gi|505 SLPGTVIAFLNVHDRDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSIYN 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP ::::::::::::::::::::: ::::::::::: :::::::.:::::::::::::::::: gi|505 ITVIASDLGAPPLSTETYIALIVADTNDNPPRFPHTSYTAYIPENNLRGASIFSLTAHDP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS :::::::::::::::::::::::::::::::::.::::.::::::::::::::.:::::: gi|505 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGVLYALHSFDFEKIQDLQLLVVATDSGS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 LTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQRW ::::::::::::::::::: :: ::::::.:::::::::::::::::::::::::::::: gi|505 LTVAVANSIPEVLADLSSIRTPGVPEDSDITLHLVVAVAVVSCVFLVFVIVLLALRLQRW 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 QKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML :::::::::..::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 QKSRQLQGSKGGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 INQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP ::::.:::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|505 INQEGCEKNDSLLTSIDFHESKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA0 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|505 NNQFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPG 840 850 860 870 880 890 910 920 930 mKIAA0 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK ::::::::::::::::::::::::::::::::: gi|505 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 900 910 920 930 >>gi|2190018|dbj|BAA20359.1| protocadherin 4 [Rattus rat (928 aa) initn: 4003 init1: 3154 opt: 5716 Z-score: 6580.0 bits: 1228.8 E(): 0 Smith-Waterman score: 5716; 94.206% identity (97.747% similar) in 932 aa overlap (2-933:1-928) 10 20 30 40 50 60 mKIAA0 TMAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL :.::.::::::::::.::::::::::.:::::::::::::::::::::::::::::::: gi|219 MTASQNQHRHGRLVLFCTLMGTLCKIGVGQIRYSVPEETDKGTVVGNISKDLGLEPREL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV ::::::::::::::::: . : .::::.::::::::::: ::::::::::::::::::: gi|219 AERGVRIVSRGRSQLFSHESAGRNLVTASRIDREELCAQSIPCLVNINILVEEKGKLFGV 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS :: ::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|219 EI--TDINDNNPKFHVGDLEVKINEIAAPGARYPLPKAVDPDVGINSLQSYQLSPNRHFS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA : .: ::::::::::::: ::::::::.:::.:::::. : :::::::::.::::::::: gi|219 LDIQRGDDGTINPELVLENTLDREEEPSHHLILTASDA-ERRRSSTALIQVTVLDTNDNA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG ::::::::::::::::.::::::::::::::::.::::::::.:::.::::::::::::: gi|219 PVFDQPVYRVKVLENVTPGTLLLTVRASDPDEGANGKVTYKFQKINDKQSLLFHLHENTG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|219 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVVIMVEDVNDNRPEVTITSLFNPVLEN 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: :: gi|219 SLPGTVIAFLNVHDRDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSIYN 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP :::::::::: . ::::::: ::::::::::: :::::::.:::::::::::::::::: gi|219 ITVIASDLGAHSV-TETYIALIVADTNDNPPRFPHTSYTAYIPENNLRGASIFSLTAHDP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS :::::::::::::::::::::::::::::::::.::::.::::::::::::::.:::::: gi|219 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGVLYALHSFDFEKIQDLQLLVVATDSGS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 LTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQRW ::::::::::::::::::: :: ::::::.:::::::::::::::::::::::::::::: gi|219 LTVAVANSIPEVLADLSSIRTPGVPEDSDITLHLVVAVAVVSCVFLVFVIVLLALRLQRW 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 QKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML :::::::::..::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 QKSRQLQGSKGGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 INQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP ::::.:::::::::::::::.. ::::::::::::::::::::::::::::::::::::: gi|219 INQEGCEKNDSLLTSIDFHESNREDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA0 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|219 NNQFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPG 840 850 860 870 880 890 910 920 930 mKIAA0 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::..:::::::: gi|219 SNATLTNAAGKRDGKAPAGGNGNNNKSGKKEKK 900 910 920 >>gi|149017333|gb|EDL76384.1| rCG49295, isoform CRA_t [R (870 aa) initn: 5830 init1: 5453 opt: 5453 Z-score: 6277.3 bits: 1172.7 E(): 0 Smith-Waterman score: 5453; 96.176% identity (99.073% similar) in 863 aa overlap (2-864:1-863) 10 20 30 40 50 60 mKIAA0 TMAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL ::::.::::::::::.::::::::::.:::::::::::::::::::::::::::::::: gi|149 MAASQNQHRHGRLVLFCTLMGTLCKIGVGQIRYSVPEETDKGTVVGNISKDLGLEPREL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV ::::::::::::::::::::::::::::.::::::::::: ::::::::::::::::::: gi|149 AERGVRIVSRGRSQLFSLNPRGGSLVTASRIDREELCAQSIPCLVNINILVEEKGKLFGV 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|149 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPKAVDPDVGINSLQSYQLSPNRHFS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA : .: :::::::::::::.::::::::.:::::::::::.::::::::::.::::::::: gi|149 LDIQRGDDGTINPELVLEHTLDREEEPSHHLVLTASDGGDPRRSSTALIQVTVLDTNDNA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG :::::::::::::::::::::::::::::::::.::::::::.:::.::::::::::::: gi|149 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGANGKVTYKFQKINDKQSLLFHLHENTG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|149 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVVIMVEDVNDNRPEVTITSLFNPVLEN 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: :: gi|149 SLPGTVIAFLNVHDRDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSIYN 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP ::::::::::::::::::::: ::::::::::: :::::::.:::::::::::::::::: gi|149 ITVIASDLGAPPLSTETYIALIVADTNDNPPRFPHTSYTAYIPENNLRGASIFSLTAHDP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS :::::::::::::::::::::::::::::::::.::::.::::::::::::::.:::::: gi|149 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGVLYALHSFDFEKIQDLQLLVVATDSGS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 LTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQRW ::::::::::::::::::: :: ::::::.:::::::::::::::::::::::::::::: gi|149 LTVAVANSIPEVLADLSSIRTPGVPEDSDITLHLVVAVAVVSCVFLVFVIVLLALRLQRW 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 QKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML :::::::::..::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QKSRQLQGSKGGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 INQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP ::::.:::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|149 INQEGCEKNDSLLTSIDFHESKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA0 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG :::::::::::::::::::::::. gi|149 NNQFDTEMLQAMILASASEAADGTLPVLTSL 840 850 860 870 >>gi|62510865|sp|Q5DRB2.1|PCDG8_PANTR RecName: Full=Prot (932 aa) initn: 5147 init1: 5147 opt: 5148 Z-score: 5925.3 bits: 1107.7 E(): 0 Smith-Waterman score: 5148; 83.923% identity (94.962% similar) in 933 aa overlap (2-933:1-932) 10 20 30 40 50 60 mKIAA0 TMAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL ::: ... :.:.:.:::.:.::: .:. ::::::::::::::. ::::::::::.:::: gi|625 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPREL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV :..:::::::::.:::.::::.:::::::::::::::::: ::.:::::::.::::::. gi|625 AKHGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPRCLININILVEDKGKLFGI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS ::::.:::::::::.: ::::::::::.::::::::::::::::.:::::::::::.::: gi|625 EIEIVDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA : .::::.:.:::::::::.:::::: .::::::::::::::::::. :..::::::::: gi|625 LDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG ::: .:.::::::::. ::: :::: :::::::.::::.::::::::::. ::.:.:::: gi|625 PVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN :...::.:::::::.::::::::::::::::.:..: ::::::::::: :::::.::::: gi|625 EISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLEN 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN ::::::::::.::::::::::::::.:.::::::::::::::::::: ::::::.:: :: gi|625 SLPGTVIAFLSVHDQDSGKNGQVVCHTRDNLPFKLEKSIDNYYRLVTRKYLDRENVSIYN 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP :::.:::::.::::::: ::: ::: ::::: : :.::.::. ::::::::::::::::: gi|625 ITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS ::::::::::::.:::.::.:::::::::::::.::::::::.:.:.:::::: :.:::. gi|625 DSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGD 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG ::::::::::::::::::::::::::..:::::::.::::::::::::::::::::.::: gi|625 PPLSSNVSLSLFVLDQNDNAPEILYPTLPTDGSTGLELAPRSAEPGYLVTKVVAVDRDSG 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT :::::::::::::::::::::::::::::::::::::::::.::.::::::::::::::: gi|625 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 600 610 620 630 640 650 670 680 690 700 710 mKIAA0 LTVAVANSIPEVLADLSSIMTPEV-PEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQR ::::::.::::::..:.: . : : :.::.:::.::::::..:::::.:: :::.:::.: gi|625 LTVAVADSIPEVLTELGS-LKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRR 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 WQKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADM :.::. :: : . :. .: :::::.. :::::::::.:::::. :. ::.::::::::: gi|625 WHKSHLLQDSSGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 LINQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTW ::.:::::::::::::.:::: :.: . :::::::::::::::::::::::::.:::: gi|625 LISQESCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTW 780 790 800 810 820 830 840 850 860 870 880 890 mKIAA0 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 840 850 860 870 880 890 900 910 920 930 mKIAA0 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::: gi|625 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 900 910 920 930 >>gi|37999835|sp|Q9Y5G5.1|PCDG8_HUMAN RecName: Full=Prot (932 aa) initn: 5111 init1: 5111 opt: 5112 Z-score: 5883.8 bits: 1100.0 E(): 0 Smith-Waterman score: 5112; 83.494% identity (94.534% similar) in 933 aa overlap (2-933:1-932) 10 20 30 40 50 60 mKIAA0 TMAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL ::: ... :.:.:.:::.:.::: .:. ::::::::::::::. ::::::::::.::.: gi|379 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV :..:::::::::.:::.::::.:::.:::::::::::::: ::.::: :::.::::::: gi|379 AKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGV 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS :::: :::::::::.: ::::::::::.::::::::::::::::.:::::::::::.::: gi|379 EIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA : .::::.:.:::::::::.:::::: .:::::::::::.: ::::. :..::::::::: gi|379 LDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG ::: .:.::::::::. ::: :::: :::::::.::::.::::::::::. ::.:.:::: gi|379 PVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN :...::.:::::::.::::::::::::::::.:..: ::::::::::: :::::.::::: gi|379 EISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLEN 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN ::::::::::.::::::::::::::::.::::::::::: ::::::: ::::::.:: :: gi|379 SLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYN 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP :::.:::::.::::::: ::: ::: ::::: : :.::.::. ::::::::::::::::: gi|379 ITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDP 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS ::::::::::::.:::.::.:::::::::::::.::::::::.:.:.:::::: :.:::. gi|379 DSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGD 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG ::::::.:::::::::::::::::::..:::::::::::::::: :::::::::::.::: gi|379 PPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSG 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT :::::::::::::::::::::::::::::::::::::::::.::.::::::::::::::: gi|379 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 600 610 620 630 640 650 670 680 690 700 710 mKIAA0 LTVAVANSIPEVLADLSSIMTPEV-PEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQR ::::::.::::::..:.: . : : :.::.:::.::::::..:::::.:: :::.:::.: gi|379 LTVAVADSIPEVLTELGS-LKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRR 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 WQKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADM :.::: :: : . :. .: :::::.. :::::::::.:::::. :. ::.:::::::::: gi|379 WHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADM 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 LINQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTW ::.::.::::::::::.:::: :.: . :::::::::::::::::::::::::.:::: gi|379 LISQEGCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTW 780 790 800 810 820 830 840 850 860 870 880 890 mKIAA0 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 840 850 860 870 880 890 900 910 920 930 mKIAA0 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::: gi|379 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 900 910 920 930 >>gi|148743906|gb|AAI42515.1| PCDHGA8 protein [Bos tauru (932 aa) initn: 5053 init1: 5053 opt: 5053 Z-score: 5815.8 bits: 1087.4 E(): 0 Smith-Waterman score: 5053; 82.511% identity (93.562% similar) in 932 aa overlap (2-933:1-932) 10 20 30 40 50 60 mKIAA0 TMAASKNQHRHGRLVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPREL ::: :: .:.:::::.:.:.: ::. :::.::::::::::. ::::::::::: .:: gi|148 MAAPKNYGGRGELVLLCALLGALGKIGRGQIHYSVPEETDKGSFVGNISKDLGLESQEL 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 AERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFGV ...:::::::::.:::.::::.::::::::::::::::::. :.::::::::..:::.:. gi|148 SKHGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSARCFVNINILVEDEGKLWGI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFS :.::::::::::::.: .::::::::: ::.:::::::::::::.::::::::::: ::: gi|148 EVEITDINDNNPKFQVENLEVKINEIALPGTRYPLPEAVDPDVGLNSLQSYQLSPNNHFS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 LHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDNA : .::::::...:::::::.:::::: .:.::: :.::::::::::. :..::::::::: gi|148 LDVQTGDDGAVSPELVLERALDREEEAAHYLVLIATDGGEPRRSSTVHIRVTVLDTNDNA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTG ::: ::.::::: ::: ::: :::: :::::::.::.:.::: ::.:::: ::.:.:::: gi|148 PVFAQPIYRVKVPENVPPGTRLLTVSASDPDEGTNGEVAYKFWKISEKQSPLFQLNENTG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 EMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLEN :...::.::::::..:.::::::::::::::.::.: :::::::::::::::::.::::: gi|148 EISTAKSLDYEECTFYDMEIQAEDVGALLGRTKVLISVEDVNDNRPEVTITSLFSPVLEN 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 SLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTYN .:::::::::::::.::::::::::::.:::::.:::::::::::::::::::::.: :: gi|148 TLPGTVIAFLNVHDRDSGKNGQVVCYTRDNLPFQLEKSIDNYYRLVTWKYLDREKISMYN 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 ITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHDP ::: :::::.:::::: .::: ::: ::::: : :.::.::.:::: :::::::.:::: gi|148 ITVAASDLGTPPLSTEIHIALQVADINDNPPIFPHASYSAYIPENNPRGASIFSVTAHDH 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 DSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSGS :: :::::::... .:..::::::.:::::::.::::.:::.:.:::::::: : :.:. gi|148 DSGSNAQVTYSLTKGSIMAVPLSSYVSINSDTGVLYALHSFDYEQIQDLQLLVTARDNGD 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 PPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG : ::::::::::.::::::::::::: .::::::::::::::::::::::::::::.::: gi|148 PQLSSNVSLSLFILDQNDNAPEILYPMLPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSG 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATVT ::::::::::::::::::.::::::::::::::::::.:::.:::.:.:::::::::::: gi|148 QNAWLSYRLLKASEPGLFTVGLHTGEVRTARALLDRDSLKQSLVMTVHDHGQPPLSATVT 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 LTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQRW ::::::.:::.:::::.:: : :::::::.::::::::::.::.::::::.::: :: gi|148 LTVAVADSIPDVLADLGSIRTLTNSEDSDLTLYLVVAVAVVSCIFLAFVIVLLSLRLWRW 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA0 QKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADML .::: ::.: . :: : : :::..::::::::::::::::: : ::.::::::::::: gi|148 HKSRLLQASSGRLAGLPASGFVGMEGVQAFLQTYSHEVSLTSDSPRSHMIFPQPNYADML 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA0 INQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP :.:.:::::::::::::::: .:: : . ::::::::::::::::::::::::::::::: gi|148 ISQDSCEKNDSLLTSIDFHECRDEAAAVQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWP 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA0 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 840 850 860 870 880 890 910 920 930 mKIAA0 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK ::::::::::::::::::::::::::::::::: gi|148 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 900 910 920 930 >>gi|13876344|gb|AAK26092.1| protocadherin gamma A9 [Mus (932 aa) initn: 3609 init1: 3609 opt: 4913 Z-score: 5654.5 bits: 1057.6 E(): 0 Smith-Waterman score: 4913; 79.743% identity (92.712% similar) in 933 aa overlap (2-933:1-932) 10 20 30 40 50 mKIAA0 TMAASKNQHRHGR-LVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPRE :::. .. : : ::.::.:.: : . .:::::::::::.:: .:::::::::::::: gi|138 MAAAPARRPHCRELVVLCALLGMLWEARAGQIRYSVPEETEKGYIVGNISKDLGLEPRE 10 20 30 40 50 60 70 80 90 100 110 mKIAA0 LAERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFG ::::::::.:.:..:::::.::.::::::::::::::::::. ::.:...:::.. ::.: gi|138 LAERGVRIISKGKTQLFSLSPRSGSLVTAGRIDREELCAQSATCLLNFKVLVEDRVKLYG 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 VEIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHF ::.:..::::: :::.. .: :::.::::::::::::::::::::::::::::::::::: gi|138 VEVEVVDINDNAPKFEAENLFVKISEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHF 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 SLHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDN :::::::::::::::::::::::::::::::::::: :::.::::::::::.:::::::: gi|138 SLHLQTGDDGTINPELVLERTLDREEEPTHHLVLTAYDGGNPRRSSTALIQVTVLDTNDN 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 APVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENT ::::::::::::::::::::::::::::::::::.::::::::::::::.:::::::::: gi|138 APVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGANGKVTYKFRKINEKHSLLFHLHENT 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 GEMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLE ::::::::::::::::::::::::: :.: ::.::..::::::::::::::::::.:: : gi|138 GEMTVAKNLDYEECSLYEMEIQAEDGGGLKGRTKVVVMVEDVNDNRPEVTITSLFSPVRE 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 NSLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTY .. ::::: ..:.::::::::::::: ..: ::::.:.:.::::.: . :::::.: : gi|138 DAPPGTVILLFNAHDQDSGKNGQVVCSIQENPSFKLENSVDDYYRLLTAQILDREKASEY 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 NITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHD :::: :.: :.: .:::..:.: ::: ::::: ::.:::..:::::: ::.::::..::: gi|138 NITVTATDRGTPSMSTEVHITLYVADINDNPPAFSQTSYSVYLPENNPRGTSIFSVSAHD 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 PDSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSG ::..:::.::::. :.::::.:::::.:::::::.::::::::.:..:.::. : :.:.: gi|138 PDDEENAKVTYSLVENTIQGAPLSSYVSINSDTGVLYALQSFDYEQFQNLQMQVKASDNG 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 SPPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDS ::::::::::.:.::::::::.:::::.:::::::::::::::: :::::::::::::: gi|138 HPPLSSNVSLSVFLLDQNDNAPKILYPSLPTDGSTGVELAPRSAEAGYLVTKVVAVDKDS 540 550 560 570 580 590 600 610 620 630 640 650 mKIAA0 GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATV :::::::::::::::::::.:::..::.:::::::.::::::.::.:::::::::::::. gi|138 GQNAWLSYRLLKASEPGLFTVGLRSGEIRTARALLERDALKQSLVVAVQDHGQPPLSATI 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 TLTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQR :::::::.:::..::::.:: :: : :::.::.:::::::::::::.::.:::::::.: gi|138 TLTVAVADSIPDILADLGSINTPADP-DSDITLYLVVAVAVVSCVFLLFVLVLLALRLRR 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 WQKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADM :. :. :: . .: . .: ::.::. :::.::::::.: ::: : ::.::::::::: gi|138 WHASHLLQDAMGGSTGVPTSHIVGVHGVQTFLQTYSQEFSLTPDSGKSHLIFPQPNYADT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 LINQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTW ::.:::: :.. : .:.. . :. .::::::::::::::::::::::::::::::: gi|138 LISQESCGKSEPLCSSVEPKFPIDDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDETGTW 780 790 800 810 820 830 840 850 860 870 880 890 mKIAA0 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 840 850 860 870 880 890 900 910 920 930 mKIAA0 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::: gi|138 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 900 910 920 930 >>gi|148678194|gb|EDL10141.1| mCG133388, isoform CRA_x [ (932 aa) initn: 3608 init1: 3608 opt: 4912 Z-score: 5653.3 bits: 1057.4 E(): 0 Smith-Waterman score: 4912; 79.636% identity (92.819% similar) in 933 aa overlap (2-933:1-932) 10 20 30 40 50 mKIAA0 TMAASKNQHRHGR-LVLLCTLMGTLCKISVGQIRYSVPEETDKGTVVGNISKDLGLEPRE :::. .. : : ::.::.:.: : . .:::::::::::.:: .:::::::::::::: gi|148 MAAAPARRPHCRELVVLCALLGMLWEARAGQIRYSVPEETEKGYIVGNISKDLGLEPRE 10 20 30 40 50 60 70 80 90 100 110 mKIAA0 LAERGVRIVSRGRSQLFSLNPRGGSLVTAGRIDREELCAQSTPCLVNINILVEEKGKLFG ::::::::::.:..:::::.::.::::::::::::::::::.:::.....:::.. ::.: gi|148 LAERGVRIVSKGKTQLFSLSPRSGSLVTAGRIDREELCAQSAPCLLSFKVLVEDRVKLYG 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 VEIEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHF ::.:..::::: :::.. .: :::.::::::::::::::::::::::::::::::::.:: gi|148 VEVEVVDINDNAPKFEAKNLVVKISEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNHHF 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 SLHLQTGDDGTINPELVLERTLDREEEPTHHLVLTASDGGEPRRSSTALIQITVLDTNDN :::::::::::::::::::::::::::::::::::: :::.::::::::::.:::::::: gi|148 SLHLQTGDDGTINPELVLERTLDREEEPTHHLVLTAYDGGNPRRSSTALIQVTVLDTNDN 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 APVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENT ::::::::::::::::::::::::::::::::::.::::::::::::::.:::::::::: gi|148 APVFDQPVYRVKVLENVAPGTLLLTVRASDPDEGANGKVTYKFRKINEKHSLLFHLHENT 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 GEMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVIIMVEDVNDNRPEVTITSLFNPVLE ::::::::::::::::::::::::: :.: ::.::..::::::::::::::::::.:: : gi|148 GEMTVAKNLDYEECSLYEMEIQAEDGGGLKGRTKVVVMVEDVNDNRPEVTITSLFSPVRE 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 NSLPGTVIAFLNVHDQDSGKNGQVVCYTHDNLPFKLEKSIDNYYRLVTWKYLDREKVSTY .. ::::: ..:.::::::::::::: ..: ::::.:.:.::::.: . :::::.: : gi|148 DAPPGTVILLFNAHDQDSGKNGQVVCSIQENPSFKLENSVDDYYRLLTAQILDREKASEY 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 NITVIASDLGAPPLSTETYIALTVADTNDNPPRFSHTSYTAYLPENNLRGASIFSLTAHD :::: :.: :.: .:::..:.: ::: ::::: ::.:::..:::::: ::.::::..::: gi|148 NITVTATDRGTPSMSTEVHITLYVADINDNPPAFSQTSYSVYLPENNPRGTSIFSVSAHD 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 PDSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQLLVIATDSG ::..:::.::::. :.::::.:::::.:::::::.::::::::.:..:.::. : :.:.: gi|148 PDDEENAKVTYSLVENTIQGAPLSSYVSINSDTGVLYALQSFDYEQFQNLQMQVKASDNG 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 SPPLSSNVSLSLFVLDQNDNAPEILYPSFPTDGSTGVELAPRSAEPGYLVTKVVAVDKDS ::::::::::.:.::::::::.:::::.:::::::::::::::: :::::::::::::: gi|148 HPPLSSNVSLSVFLLDQNDNAPKILYPSLPTDGSTGVELAPRSAEAGYLVTKVVAVDKDS 540 550 560 570 580 590 600 610 620 630 640 650 mKIAA0 GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVMAVQDHGQPPLSATV :::::::::::::::::::.:::..::.:::::::.::::::.::.:::::::::::::. gi|148 GQNAWLSYRLLKASEPGLFTVGLRSGEIRTARALLERDALKQSLVVAVQDHGQPPLSATI 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 TLTVAVANSIPEVLADLSSIMTPEVPEDSDLTLHLVVAVAVVSCVFLVFVIVLLALRLQR :::::::.:::..::::.:: :: : :::.::.::::::::::.::.::.:::::::.: gi|148 TLTVAVADSIPDILADLGSINTPADP-DSDITLYLVVAVAVVSCIFLLFVLVLLALRLRR 660 670 680 690 700 710 720 730 740 750 760 770 mKIAA0 WQKSRQLQGSRSGLAPAPPSHFVGIDGVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADM :. :. :: . .: . .: ::.::. :::.::::::.: ::: : ::.::::::::: gi|148 WHASHLLQDAMGGSTGVPTSHIVGVHGVQTFLQTYSQEFSLTPDSGKSHLIFPQPNYADT 720 730 740 750 760 770 780 790 800 810 820 830 mKIAA0 LINQESCEKNDSLLTSIDFHENKDEDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTW ::.:::: :.. : .:.. . :. .::::::::::::::::::::::::::::::: gi|148 LISQESCGKSEPLCSSVEPKFPIDDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDETGTW 780 790 800 810 820 830 840 850 860 870 880 890 mKIAA0 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 840 850 860 870 880 890 900 910 920 930 mKIAA0 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK :::::::::::::::::::::::::::::::::: gi|148 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 900 910 920 930 933 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 02:39:20 2009 done: Sat Mar 14 02:48:07 2009 Total Scan time: 1149.060 Total Display time: 0.510 Function used was FASTA [version 34.26.5 April 26, 2007]