# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj33105.fasta.nr -Q ../query/mKIAA4155.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4155, 747 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918446 sequences Expectation_n fit: rho(ln(x))= 5.6090+/-0.00019; mu= 11.1460+/- 0.011 mean_var=82.2869+/-16.157, 0's: 39 Z-trim: 54 B-trim: 2692 in 1/65 Lambda= 0.141387 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26354498|dbj|BAC40877.1| unnamed protein produc ( 962) 4976 1025.1 0 gi|74142121|dbj|BAE41120.1| unnamed protein produc ( 962) 4968 1023.5 0 gi|42542785|gb|AAH66180.1| Usp4 protein [Mus muscu ( 961) 4961 1022.1 0 gi|2655204|gb|AAC53587.1| ubiquitin-specific prote ( 962) 4961 1022.1 0 gi|2851531|sp|P35123.2|UBP4_MOUSE RecName: Full=Ub ( 962) 4950 1019.8 0 gi|149018536|gb|EDL77177.1| similar to Ubiquitin c ( 961) 4784 986.0 0 gi|73985807|ref|XP_533829.2| PREDICTED: similar to (1037) 4676 964.0 0 gi|114586848|ref|XP_001163174.1| PREDICTED: ubiqui ( 881) 4644 957.4 0 gi|114586852|ref|XP_001162976.1| PREDICTED: ubiqui ( 883) 4644 957.4 0 gi|114586836|ref|XP_001163445.1| PREDICTED: ubiqui ( 962) 4644 957.4 0 gi|116242839|sp|Q13107.3|UBP4_HUMAN RecName: Full= ( 963) 4626 953.8 0 gi|2459395|gb|AAB72237.1| ubiquitin protease [Homo ( 963) 4618 952.1 0 gi|62898145|dbj|BAD97012.1| ubiquitin specific pro ( 963) 4618 952.1 0 gi|115529049|gb|AAI25132.1| Ubiquitin specific pep ( 963) 4617 951.9 0 gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=U ( 963) 4595 947.4 0 gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full= ( 963) 4572 942.7 0 gi|194221320|ref|XP_001498012.2| PREDICTED: ubiqui ( 963) 4563 940.9 0 gi|114586842|ref|XP_001163293.1| PREDICTED: ubiqui ( 907) 4287 884.6 0 gi|126335813|ref|XP_001367947.1| PREDICTED: simila ( 965) 4135 853.6 0 gi|149640284|ref|XP_001505377.1| PREDICTED: simila ( 988) 3750 775.1 0 gi|114586846|ref|XP_516457.2| PREDICTED: ubiquitin ( 794) 3516 727.3 5.5e-207 gi|53131277|emb|CAG31805.1| hypothetical protein [ ( 964) 3343 692.1 2.7e-196 gi|84570095|gb|AAI10726.1| LOC398480 protein [Xeno ( 975) 3311 685.5 2.5e-194 gi|27503316|gb|AAH42353.1| LOC398480 protein [Xeno ( 973) 3308 684.9 3.8e-194 gi|189520372|ref|XP_001341961.2| PREDICTED: simila (1006) 3103 643.1 1.5e-181 gi|223647442|gb|ACN10479.1| Ubiquitin carboxyl-ter (1005) 3101 642.7 2e-181 gi|148689334|gb|EDL21281.1| ubiquitin specific pep ( 915) 3081 638.6 3.1e-180 gi|15030172|gb|AAH11341.1| Usp4 protein [Mus muscu ( 915) 3075 637.4 7.3e-180 gi|47229603|emb|CAG06799.1| unnamed protein produc (1107) 3053 632.9 1.9e-178 gi|73968627|ref|XP_860508.1| PREDICTED: similar to ( 974) 2931 608.0 5.4e-171 gi|149018537|gb|EDL77178.1| similar to Ubiquitin c ( 914) 2929 607.6 6.8e-171 gi|114586840|ref|XP_001163407.1| PREDICTED: ubiqui ( 915) 2839 589.2 2.3e-165 gi|2656143|gb|AAC27356.1| UnpES [Homo sapiens] ( 916) 2827 586.8 1.2e-164 gi|62897009|dbj|BAD96445.1| ubiquitin specific pro ( 916) 2801 581.5 4.9e-163 gi|73968625|ref|XP_860477.1| PREDICTED: similar to ( 957) 2795 580.3 1.2e-162 gi|119617510|gb|EAW97104.1| ubiquitin specific pep ( 984) 2759 572.9 2e-160 gi|114586850|ref|XP_001163016.1| PREDICTED: ubiqui ( 863) 2709 562.7 2.1e-157 gi|114586838|ref|XP_001163371.1| PREDICTED: ubiqui ( 944) 2709 562.7 2.2e-157 gi|126335815|ref|XP_001367983.1| PREDICTED: simila ( 920) 2452 510.3 1.3e-141 gi|74211276|dbj|BAE37701.1| unnamed protein produc ( 582) 2376 494.7 4.3e-137 gi|119585372|gb|EAW64968.1| ubiquitin specific pep ( 819) 2286 476.4 1.9e-131 gi|224066024|ref|XP_002192515.1| PREDICTED: ubiqui ( 904) 2193 457.5 1e-125 gi|210086248|gb|EEA34674.1| hypothetical protein B ( 887) 1771 371.4 8.4e-100 gi|73968619|ref|XP_860368.1| PREDICTED: similar to ( 838) 1749 366.9 1.8e-98 gi|73968623|ref|XP_860441.1| PREDICTED: similar to ( 924) 1743 365.7 4.6e-98 gi|109097592|ref|XP_001116731.1| PREDICTED: ubiqui ( 916) 1717 360.4 1.8e-96 gi|114644054|ref|XP_001166340.1| PREDICTED: ubiqui ( 916) 1716 360.2 2.1e-96 gi|224093933|ref|XP_002186882.1| PREDICTED: ubiqui ( 981) 1703 357.5 1.4e-95 gi|53759136|ref|NP_990171.2| ubiquitin specific pe ( 981) 1703 357.5 1.4e-95 gi|149066659|gb|EDM16532.1| ubiquitin specific pep ( 981) 1671 351.0 1.3e-93 >>gi|26354498|dbj|BAC40877.1| unnamed protein product [M (962 aa) initn: 4976 init1: 4976 opt: 4976 Z-score: 5480.7 bits: 1025.1 E(): 0 Smith-Waterman score: 4976; 100.000% identity (100.000% similar) in 732 aa overlap (14-745:1-732) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK ::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL ::::::::::::::::::::::::: gi|263 FSLVNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQP 710 720 730 740 750 760 >>gi|74142121|dbj|BAE41120.1| unnamed protein product [M (962 aa) initn: 4968 init1: 4968 opt: 4968 Z-score: 5471.9 bits: 1023.5 E(): 0 Smith-Waterman score: 4968; 99.727% identity (100.000% similar) in 732 aa overlap (14-745:1-732) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK ::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|741 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLREHLIDELDYVLVPAEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ACNGSRGSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL ::::::::::::::::::::::::: gi|741 FSLVNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQP 710 720 730 740 750 760 >>gi|42542785|gb|AAH66180.1| Usp4 protein [Mus musculus] (961 aa) initn: 4961 init1: 4961 opt: 4961 Z-score: 5464.2 bits: 1022.1 E(): 0 Smith-Waterman score: 4961; 99.726% identity (100.000% similar) in 731 aa overlap (15-745:1-731) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK :::::::::::::::::::::::::::::::::::::::::::::: gi|425 AEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ :::.:::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 EMRRLFNIPTERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL ::::::::::::::::::::::::: gi|425 FSLVNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQP 710 720 730 740 750 760 >>gi|2655204|gb|AAC53587.1| ubiquitin-specific protease (962 aa) initn: 4961 init1: 4961 opt: 4961 Z-score: 5464.2 bits: 1022.1 E(): 0 Smith-Waterman score: 4961; 99.727% identity (99.863% similar) in 732 aa overlap (14-745:1-732) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK ::::::::::::::::::::::::::::::::::::::::::::::: gi|265 MAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::. ::::::::::::::::::::::::::::::::::::::::::: gi|265 YGCVEGQQPIVRKVVDDGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|265 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL ::::::::::::::::::::::::: gi|265 FSLVNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQP 710 720 730 740 750 760 >>gi|2851531|sp|P35123.2|UBP4_MOUSE RecName: Full=Ubiqui (962 aa) initn: 4950 init1: 4950 opt: 4950 Z-score: 5452.1 bits: 1019.8 E(): 0 Smith-Waterman score: 4950; 99.590% identity (99.727% similar) in 732 aa overlap (14-745:1-732) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK ::::::::::::::::::::::::::::::::::::::::::::::: gi|285 MAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::. ::::::::::::::::::::::::::::::::::::::::::: gi|285 YGCVEGQQPIVRKVVDDGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 NCQEAPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL ::::::::::::::::::::::::: gi|285 FSLVNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQP 710 720 730 740 750 760 >>gi|149018536|gb|EDL77177.1| similar to Ubiquitin carbo (961 aa) initn: 4411 init1: 4411 opt: 4784 Z-score: 5269.1 bits: 986.0 E(): 0 Smith-Waterman score: 4784; 96.038% identity (98.907% similar) in 732 aa overlap (14-745:1-731) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK ::::::..::::::::::::::::::::::::::::::::::::::: gi|149 MAEGRGTHERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|149 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY .:::::::::::::::::::::::: :.:::::::::::::::::.:::::::.:::::: gi|149 TLQSKSSTAPSRNFTTSSKPSASPYSSMSASLIANGDSTNSSGMHNSGVSRGGAGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|149 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|149 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPHCRPIQYRVTVPLMGAISDLCEALSKLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK :::::::::::::::::::::::::::::::::::::::.:.: ::::: :::::::::: gi|149 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEICTTPMDGSEYITLPVYFREK 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG ::::::.::::::::::::::::::.:::::::::::.:::::::::::.:::::::::: gi|149 KSRPSSTSSGAVLYGQPLLVSVPKHRLTLESLYQAVCERISRYIKQPLPEEFLSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT ::::::.:::::::: ::::::::::::::: ::::.:: : .:..::.:: :::::::: gi|149 ACNGSRGSYEGDEEE-MDHQEEGKEQLSEVEESGEDSQGGDPTETTQKAKGPPRHKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL ::::::::::::::::::::::::: gi|149 FSLVNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHTSMSQP 710 720 730 740 750 760 >>gi|73985807|ref|XP_533829.2| PREDICTED: similar to ubi (1037 aa) initn: 4487 init1: 4487 opt: 4676 Z-score: 5149.5 bits: 964.0 E(): 0 Smith-Waterman score: 4676; 92.091% identity (96.381% similar) in 746 aa overlap (1-745:61-806) 10 20 30 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQK ::::::::::::::::: : :::::.:::: gi|739 LRPARVGLGYARACVRACVRGRGPQHAVREADVRAGWAGAADEMAEGGGYRERPDAETQK 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA4 TELGALMGTTLQRGAQWYLIDSRWFKQWKKYVGFDSWDMYNVGEHNLFPGPIDNSGLFSD .:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SELGALMRTTLQRGAQWYLIDSRWFKQWKKYVGFDSWDMYNVGEHNLFPGPIDNSGLFSD 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA4 PESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYL ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|739 PESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYL 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA4 LELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSK :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LELKLCENSNPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSK 220 230 240 250 260 270 220 230 240 250 260 270 mKIAA4 LDNTIQDAGLYQGQVLVIEPQNEDGTWPRQSLQSKSSTAPSRNFTTSSKPSASPYCSVSA ::::.:::::::::::::::::::::::::.::::::::::::: :: ::::: :::: gi|739 LDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKSSTAPSRNFPTSPTSSASPYSSVSA 280 290 300 310 320 330 280 290 300 310 320 330 mKIAA4 SLIANGDSTNSSGMHSSGVSRGGSGFSASYNCQEPPSPHIQPGLCGLGNLGNTCFMNSAL : ::::::::.::::::::::::::::::::::: :: :::::::::::::::::::::: gi|739 SPIANGDSTNTSGMHSSGVSRGGSGFSASYNCQESPSSHIQPGLCGLGNLGNTCFMNSAL 340 350 360 370 380 390 340 350 360 370 380 390 mKIAA4 QCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDTHVAPRMFKT ::::::::::.:::::.::::::::::::::::::::::::::::::::::::::::::: gi|739 QCLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDTHVAPRMFKT 400 410 420 430 440 450 400 410 420 430 440 450 mKIAA4 QVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEAWE :::::::::::::::::::::::.:::::::::::::::::: ::::::::::::::::: gi|739 QVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWE 460 470 480 490 500 510 460 470 480 490 500 510 mKIAA4 NHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRIMEVFLVPAD ::::::::::::::::::::::::::::::::::::::::::::::::::.::.:::::: gi|739 NHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEIFLVPAD 520 530 540 550 560 570 520 530 540 550 560 570 mKIAA4 PQCRPIQYRVTVPLMGAISDLCEALSKLSGIAAENMVVTDVYNHRFHKIFQMDEGLSHIT :.::: ::::.::::::.::::::::.:::.:::::::::::::::::::::::::.:: gi|739 PRCRPTQYRVVVPLMGAVSDLCEALSRLSGVAAENMVVTDVYNHRFHKIFQMDEGLNHIM 580 590 600 610 620 630 580 590 600 610 620 630 mKIAA4 PRDDIFVYEVCNTSMDGSECITLPVYFREKKSRPSSASSGAVLYGQPLLVSVPKHKLTLE :::::::::::.:: :::::.::::::::.::::::.::::::::::::::: ::::::: gi|739 PRDDIFVYEVCSTSADGSECVTLPVYFRERKSRPSSTSSGAVLYGQPLLVSVAKHKLTLE 640 650 660 670 680 690 640 650 660 670 680 690 mKIAA4 SLYQAVCDRISRYIKQPLPDEFLSSPLEPGACNGSRSSYEGDEEEEMDHQEEGKEQLSEV :::::::.:::::::::::.: :::::::::::::.: ::..::::.:::::::::::. gi|739 SLYQAVCERISRYIKQPLPEESGSSPLEPGACNGSRGSCEGEDEEEMEHQEEGKEQLSET 700 710 720 730 740 750 700 710 720 730 740 mKIAA4 EGSGEDDQGDDHSESAQK-VKGQPRHKRLFTFSLVNSCGTADINSLATDGKLLKLNCL : ::::. : :: :..:: ::::: ::::::::::: :::::::::::::::::: gi|739 EDSGEDELGGDHEETTQKKVKGQPCPKRLFTFSLVNSYGTADINSLATDGKLLKLNSRST 760 770 780 790 800 810 gi|739 LAIDWDSETRSLYYDEQESEAYEKHMSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPW 820 830 840 850 860 870 >>gi|114586848|ref|XP_001163174.1| PREDICTED: ubiquitin (881 aa) initn: 4644 init1: 4644 opt: 4644 Z-score: 5115.3 bits: 957.4 E(): 0 Smith-Waterman score: 4644; 92.486% identity (97.541% similar) in 732 aa overlap (14-745:1-732) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK :::: : :::::.::::.:::::: :::::::::::::::::::::: gi|114 MAEGGGCRERPDAETQKSELGALMRTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|114 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|114 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY .:::::::::::::::: : ::::: :::::::::::::.. :::::::::::::::::: gi|114 TLQSKSSTAPSRNFTTSPKSSASPYSSVSASLIANGDSTSTCGMHSSGVSRGGSGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM ::::::: ::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|114 NCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE ::::::::::::::::::::.::::::::::::::::::::::::::::::::.:::::: gi|114 KGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG ::::::::::::::::::::.::::::::::.::: :::::::::::.::::::::.::: gi|114 SVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK ::::::::.:::::::::::::::::.:: :::::::::::.::.:::::.::::::::. gi|114 IAAENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRER 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG ::::::.::...:::::::.:::::::::::::::::::::::.:::::::: ::::::: gi|114 KSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT ::::::.: ::..::::.:::::::::::.::::::. :.: ::..::.:::: ::::: gi|114 ACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKIKGQPCPKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL :::::: :::::::::.:::::::: gi|114 FSLVNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYEKHVSMLQP 710 720 730 740 750 760 >>gi|114586852|ref|XP_001162976.1| PREDICTED: ubiquitin (883 aa) initn: 4644 init1: 4644 opt: 4644 Z-score: 5115.3 bits: 957.4 E(): 0 Smith-Waterman score: 4644; 92.486% identity (97.541% similar) in 732 aa overlap (14-745:1-732) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK :::: : :::::.::::.:::::: :::::::::::::::::::::: gi|114 MAEGGGCRERPDAETQKSELGALMRTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|114 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|114 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY .:::::::::::::::: : ::::: :::::::::::::.. :::::::::::::::::: gi|114 TLQSKSSTAPSRNFTTSPKSSASPYSSVSASLIANGDSTSTCGMHSSGVSRGGSGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM ::::::: ::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|114 NCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE ::::::::::::::::::::.::::::::::::::::::::::::::::::::.:::::: gi|114 KGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG ::::::::::::::::::::.::::::::::.::: :::::::::::.::::::::.::: gi|114 SVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK ::::::::.:::::::::::::::::.:: :::::::::::.::.:::::.::::::::. gi|114 IAAENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRER 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG ::::::.::...:::::::.:::::::::::::::::::::::.:::::::: ::::::: gi|114 KSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT ::::::.: ::..::::.:::::::::::.::::::. :.: ::..::.:::: ::::: gi|114 ACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKIKGQPCPKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL :::::: :::::::::.:::::::: gi|114 FSLVNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYEKHVSMLQP 710 720 730 740 750 760 >>gi|114586836|ref|XP_001163445.1| PREDICTED: ubiquitin (962 aa) initn: 4644 init1: 4644 opt: 4644 Z-score: 5114.7 bits: 957.4 E(): 0 Smith-Waterman score: 4644; 92.486% identity (97.541% similar) in 732 aa overlap (14-745:1-732) 10 20 30 40 50 60 mKIAA4 ADVRAGWAGAADEMAEGRGSRERPDVETQKTELGALMGTTLQRGAQWYLIDSRWFKQWKK :::: : :::::.::::.:::::: :::::::::::::::::::::: gi|114 MAEGGGCRERPDAETQKSELGALMRTTLQRGAQWYLIDSRWFKQWKK 10 20 30 40 70 80 90 100 110 120 mKIAA4 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNW ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|114 YVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEAWNKLLNW 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEK 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQ ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|114 EMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SLQSKSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSGMHSSGVSRGGSGFSASY .:::::::::::::::: : ::::: :::::::::::::.. :::::::::::::::::: gi|114 TLQSKSSTAPSRNFTTSPKSSASPYSSVSASLIANGDSTSTCGMHSSGVSRGGSGFSASY 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGM ::::::: ::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|114 NCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGM 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHE ::::::::::::::::::::.::::::::::::::::::::::::::::::::.:::::: gi|114 KGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 DLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 SVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSG ::::::::::::::::::::.::::::::::.::: :::::::::::.::::::::.::: gi|114 SVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 IAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREK ::::::::.:::::::::::::::::.:: :::::::::::.::.:::::.::::::::. gi|114 IAAENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRER 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 KSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPG ::::::.::...:::::::.:::::::::::::::::::::::.:::::::: ::::::: gi|114 KSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPG 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 ACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFT ::::::.: ::..::::.:::::::::::.::::::. :.: ::..::.:::: ::::: gi|114 ACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKIKGQPCPKRLFT 650 660 670 680 690 700 730 740 mKIAA4 FSLVNSCGTADINSLATDGKLLKLNCL :::::: :::::::::.:::::::: gi|114 FSLVNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYEKHVSMLQP 710 720 730 740 750 760 747 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 20:12:43 2009 done: Tue Mar 17 20:20:49 2009 Total Scan time: 1069.080 Total Display time: 0.350 Function used was FASTA [version 34.26.5 April 26, 2007]