Comparison of KIAA cDNA sequences between mouse and human (KIAA0260)
<<Original sequence data>>
mouse mKIAA0260 (mfj33008) length: 4016 bp, CDS: 1 - 996
human KIAA0260 (ha07062) length: 5918 bp, CDS: 3 - 1154
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 159 - 1154 917 79 7.9
3'UTR: 1155 - 5976 1780 1263 41.5
amino acid
CDS: 159 - 1154 324 8 2.4
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mfj33008 1 .................................................. 1
ha07062 1 CCAACTCCTGGAGTCCCCTGGGAGCTGCCGCTGCAGGCCCCCGAGCCGCT 50
N S W S P L G A A A A G P R A A
51 ----+----*----+----*----+----*----+----*----+----* 100
mfj33008 1 .................................................. 1
ha07062 51 AGGCCCCGCCGCCAGGCCACCGCTGCTGCGGCAGCCATGGCGGAAGTTCA 100
R P R R Q A T A A A A A M A E V H
101 ----+----*----+----*----+----*----+----*----+----* 150
mfj33008 1 .................................................. 1
ha07062 101 TAGACGTCAGCATGCTCGGGTTAAAGGAGAAGCCCCCGCGAAATCCTCCA 150
R R Q H A R V K G E A P A K S S T
151 ----+----*----+----*----+----*----+----*----+----* 200
D E E E L G M A P A E T L T
mfj33008 1 ........GATGAGGAGGAGCTGGGGATGGCGCCGGCCGAAACGCTAACG 42
|||||||||||||||||||||||| ||||||||||||| ||
ha07062 151 CACTCCGAGATGAGGAGGAGCTGGGGATGGCGTCGGCCGAAACGCTGACC 200
L R D E E E L G M A S A E T L T
201 ----+----*----+----*----+----*----+----*----+----* 250
V F L K L L A A G F Y G V S S F L
mfj33008 43 GTGTTCCTGAAGCTGCTGGCCGCCGGTTTCTACGGCGTGAGCTCCTTCCT 92
||||| |||||||||||||||||||| || ||||||||||||||||||||
ha07062 201 GTGTTTCTGAAGCTGCTGGCCGCCGGCTTTTACGGCGTGAGCTCCTTCCT 250
V F L K L L A A G F Y G V S S F L
251 ----+----*----+----*----+----*----+----*----+----* 300
I V V V N K S V L T N Y R F P S S
mfj33008 93 CATCGTGGTGGTCAACAAGAGCGTGCTCACCAACTACAGATTTCCATCCT 142
||||||||||| || ||||||||||||||||| ||||||||||| ||||
ha07062 251 GATCGTGGTGGTGAATAAGAGCGTGCTCACCAATTACAGATTTCCCTCCT 300
I V V V N K S V L T N Y R F P S S
301 ----+----*----+----*----+----*----+----*----+----* 350
L C V G L G Q M V A T V A V L W
mfj33008 143 CGCTATGTGTTGGACTTGGCCAGATGGTGGCCACGGTAGCGGTTCTCTGG 192
| |||||||||||||||||||||||||||||||| || || |||||||||
ha07062 301 CACTATGTGTTGGACTTGGCCAGATGGTGGCCACAGTGGCAGTTCTCTGG 350
L C V G L G Q M V A T V A V L W
351 ----+----*----+----*----+----*----+----*----+----* 400
V G K T L R V V K F P D F D R N V
mfj33008 193 GTGGGAAAGACACTCAGAGTAGTCAAGTTTCCTGACTTCGACAGAAATGT 242
||||||||| | |||||||||||||||||||||||| | |||||||||||
ha07062 351 GTGGGAAAGGCGCTCAGAGTAGTCAAGTTTCCTGACCTTGACAGAAATGT 400
V G K A L R V V K F P D L D R N V
401 ----+----*----+----*----+----*----+----*----+----* 450
P R K T F P L P L L Y F G N Q I T
mfj33008 243 ACCTCGAAAGACGTTTCCACTACCTCTACTATATTTTGGGAACCAAATCA 292
||||||||||||||||||||||||||||||||||||||||||||||||||
ha07062 401 ACCTCGAAAGACGTTTCCACTACCTCTACTATATTTTGGGAACCAAATCA 450
P R K T F P L P L L Y F G N Q I T
451 ----+----*----+----*----+----*----+----*----+----* 500
G L F S T K K L N L P M F T V L
mfj33008 293 CGGGACTGTTCAGCACAAAGAAACTGAACCTGCCCATGTTTACAGTTCTG 342
||||||||||||||||||||||||||||| |||| |||||||||||||||
ha07062 451 CGGGACTGTTCAGCACAAAGAAACTGAACTTGCCAATGTTTACAGTTCTG 500
G L F S T K K L N L P M F T V L
501 ----+----*----+----*----+----*----+----*----+----* 550
R R F S I L F T M F A E G A L L K
mfj33008 343 AGAAGGTTCTCCATTCTGTTTACAATGTTTGCTGAAGGCGCTCTACTCAA 392
|||||||||||||| ||||||||||||||||||||||| | | |||||||
ha07062 501 AGAAGGTTCTCCATCCTGTTTACAATGTTTGCTGAAGGAGTTTTACTCAA 550
R R F S I L F T M F A E G V L L K
551 ----+----*----+----*----+----*----+----*----+----* 600
K T F S W G I K M T V F A M I I G
mfj33008 393 GAAGACTTTCTCCTGGGGTATTAAGATGACTGTATTTGCAATGATCATCG 442
||||||||| || ||||||||||| |||||||||||||||||||| || |
ha07062 551 GAAGACTTTTTCTTGGGGTATTAAAATGACTGTATTTGCAATGATTATTG 600
K T F S W G I K M T V F A M I I G
601 ----+----*----+----*----+----*----+----*----+----* 650
A F V A A S S D L A F D L E G Y
mfj33008 443 GAGCCTTCGTAGCTGCCAGCTCTGACTTGGCCTTTGATCTGGAAGGATAT 492
||||||| ||||||||||||||||||||||| ||||||||||||||||||
ha07062 601 GAGCCTTTGTAGCTGCCAGCTCTGACTTGGCATTTGATCTGGAAGGATAT 650
A F V A A S S D L A F D L E G Y
651 ----+----*----+----*----+----*----+----*----+----* 700
V F I L I N D V L T A A N G A Y V
mfj33008 493 GTTTTTATTTTGATCAATGATGTCCTGACAGCAGCAAATGGTGCATACGT 542
| ||||||| |||| || |||||||| |||||||||||||||||||||||
ha07062 651 GCTTTTATTCTGATAAACGATGTCCTAACAGCAGCAAATGGTGCATACGT 700
A F I L I N D V L T A A N G A Y V
701 ----+----*----+----*----+----*----+----*----+----* 750
K Q K L D S K E L G K Y G L L Y Y
mfj33008 543 GAAACAGAAGTTAGATTCAAAAGAGCTGGGAAAGTATGGCCTGCTCTATT 592
||||| || ||||||||||||||||||||||| ||||| ||||||||||
ha07062 701 AAAACAAAAATTAGATTCAAAAGAGCTGGGAAAATATGGACTGCTCTATT 750
K Q K L D S K E L G K Y G L L Y Y
751 ----+----*----+----*----+----*----+----*----+----* 800
N A L F M I L P T L A I A Y F T
mfj33008 593 ACAATGCACTGTTCATGATTCTGCCCACCCTGGCCATTGCGTATTTCACA 642
||||||||||||||||||||||||||||||||||||||||||||||||||
ha07062 751 ACAATGCACTGTTCATGATTCTGCCCACCCTGGCCATTGCGTATTTCACA 800
N A L F M I L P T L A I A Y F T
801 ----+----*----+----*----+----*----+----*----+----* 850
G D A Q K A M E F E G W A D T L F
mfj33008 643 GGAGATGCACAAAAGGCAATGGAGTTTGAGGGCTGGGCTGACACCCTGTT 692
||||||||||||||||| |||||||||| ||||||||||||||||| ||
ha07062 801 GGAGATGCACAAAAGGCTGTGGAGTTTGAAGGCTGGGCTGACACCCTCTT 850
G D A Q K A V E F E G W A D T L F
851 ----+----*----+----*----+----*----+----*----+----* 900
L L Q F T L S C V M G F I L M Y A
mfj33008 693 CCTGCTGCAGTTCACCCTCTCCTGTGTGATGGGGTTCATCTTGATGTATG 742
|| |||||||||||||||||||||||||||||||| ||||| ||||| |
ha07062 851 TCTTCTGCAGTTCACCCTCTCCTGTGTGATGGGGTTTATCTTAATGTACG 900
L L Q F T L S C V M G F I L M Y A
901 ----+----*----+----*----+----*----+----*----+----* 950
T V L C T Q Y N S A L T T T I V
mfj33008 743 CTACAGTACTCTGTACTCAATATAACTCTGCTCTTACCACAACGATAGTT 792
| ||||||||||| || || ||||| ||||||||||| || || ||||||
ha07062 901 CCACAGTACTCTGCACGCAGTATAATTCTGCTCTTACAACTACAATAGTT 950
T V L C T Q Y N S A L T T T I V
951 ----+----*----+----*----+----*----+----*----+----* 1000
G C I K N I L I T Y I G M V F G G
mfj33008 793 GGCTGCATTAAGAATATATTAATAACTTATATTGGAATGGTCTTTGGTGG 842
||||| ||||||||||||||||||||||||||||||||||||||||||||
ha07062 951 GGCTGTATTAAGAATATATTAATAACTTATATTGGAATGGTCTTTGGTGG 1000
G C I K N I L I T Y I G M V F G G
1001 ----+----*----+----*----+----*----+----*----+----* 1050
D Y I F T W T N F I G L N I S I A
mfj33008 843 AGATTATATTTTCACATGGACAAATTTTATCGGCCTAAATATCAGTATTG 892
||||||||||||||| |||||||| || || || |||||||||| ||||
ha07062 1001 AGATTATATTTTCACGTGGACAAACTTCATTGGTTTAAATATCAGCATTG 1050
D Y I F T W T N F I G L N I S I A
1051 ----+----*----+----*----+----*----+----*----+----* 1100
G S L V Y S Y I T F T E E Q L S
mfj33008 893 CTGGAAGCCTGGTGTACTCTTACATCACTTTCACGGAAGAGCAGCTGAGC 942
|||| |||||||| || || || ||||||||||| |||||||||||||||
ha07062 1051 CTGGGAGCCTGGTATATTCCTATATCACTTTCACTGAAGAGCAGCTGAGC 1100
G S L V Y S Y I T F T E E Q L S
1101 ----+----*----+----*----+----*----+----*----+----* 1150
K Q S E A S N K L D T K G K G A V
mfj33008 943 AAGCAGTCAGAGGCCAGTAACAAGCTGGACACGAAGGGAAAAGGAGCAGT 992
|| ||||||||||| | |||||||||||||| ||||| |||||||||||
ha07062 1101 AAACAGTCAGAGGCTAATAACAAGCTGGACATTAAGGGGAAAGGAGCAGT 1150
K Q S E A N N K L D I K G K G A V
1151 ----+----*----+----*----+----*----+----*----+----* 1200
*
mfj33008 993 GTGACC............................................ 998
||||||
ha07062 1151 GTGACCAGAGGATTGCTTCATCTGATACGTAGGCCTAAGTTTTTAATCAA 1200
*
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mfj33008 999 ............TCCGCAGCCCGGAAGACACTGGAGCCTCCTGAT..TGC 1034
| | | |||||||| | || |||| ||
ha07062 1201 CTCAGAACACTGGCAGTTCCTACAGAGACACTGAGGTGTCTTGATTATGG 1250
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mfj33008 1035 GGGGAGTCAATGTTCCTTTGCAATTATACAACCCTGGGATTGACTGCTGC 1084
|| | | | |||||||||| || ||||| | ||||||| ||||||
ha07062 1251 AGGAAATAACCATTCCTTTGCACTTGTACAATCTGAGGATTGATTGCTGC 1300
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mfj33008 1085 CTTTGGAAATTT....................ATTGACTGTATGCTAACT 1114
|||| |||||| ||||||| ||| ||| |
ha07062 1301 CTTTTAAAATTTTATGAAGAGAGAAACTTATAATTGACTCTATTTTAAAT 1350
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mfj33008 1115 ...GTGTTTGAATTAATTTATATCAGACTGGAAAATGTACTGGGTGGGTT 1161
||||||||||||||||||||||||||||||| ||||||| | ||
ha07062 1351 ATGTTGTTTGAATTAATTTATATCAGACTGGAAAAGGTACTGG..GCTTT 1398
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mfj33008 1162 TTAATTTATTTTTTTCCT...CTGACAGTGAAGCATCAGTGTTTTGAAA. 1207
||||||||||||| | | | ||||||||| ||||||||||||||||
ha07062 1399 TTAATTTATTTTTCTTATATGCCGACAGTGAAACATCAGTGTTTTGAAAG 1448
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mfj33008 1208 TCCTTTACTCTATAGCTTGCTATCTGGGTGGCCCTG...GCAGTGTATAC 1254
| |||| | ||| ||| |||| |||| ||||| || | |||
ha07062 1449 TATTTTATTTCATAATTTGATATCCAGGTGTCCCTGAGAGCTGCATATGT 1498
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mfj33008 1255 AATGTGTTCCAGCTAGAGCT...GCCTTCCAGTGG..GCTGTCTCTGGAA 1299
||||| | ||| || ||||| | ||| | | | |||| ||||||
ha07062 1499 AATGTTTGCCAACTGGAGCTTCATCATTCAAATTGTTGCTGCATCTGGAG 1548
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mfj33008 1300 AC...............TAGCTGGAAATGCAGCTGAGGATCTGAAATTTC 1334
| ||||||||||||| || || |||||||||
ha07062 1549 GCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTC 1598
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mfj33008 1335 TTTTTTCTTTTCTTTTCTTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTTC 1384
| || | | || || | | || || |||| | | ||
ha07062 1599 TCTTCTTTGAATCTTATTTCTTATGATTGCATTGTCTTCATCATATCATC 1648
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mfj33008 1385 TTTTCTTTT......................................... 1393
|| | |||
ha07062 1649 ATTCCATTTGCCAAGGAAAACAACTTTGGCACTATAAAAATATGTGGGGC 1698
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj33008 1394 .....CTTTTCTTTCTTTCTTTCTTTCTTTC................... 1419
| | || || ||| | || |||
ha07062 1699 TTTGAAGTGTATTGCTATCTATGTTGGCTTCCCTGACTTTCATAGGATGA 1748
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj33008 1420 ........................TTTCTTTCTTTCTTCT.......... 1435
|||||| ||| || |
ha07062 1749 GCAGAGTGCATTCCTTGAAAACATGTTCTTTTTTTGTTGTGTAGAATGGG 1798
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj33008 1436 ...................TCTTCCTCCTCCTCCTCCTTCTTCTTCTCCT 1466
| ||| | || || ||| ||| |
ha07062 1799 GATAATGAAGGGGGTGAGAAAGTAGGCCTTTTACTAATTTTTCATCTATT 1848
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj33008 1467 CCTCCTCTTCCTCCTTCT................................ 1484
| | || | | ||
ha07062 1849 TGACTTATTGATTCAACTAAAATGTTTTAAGTATATGTGCCAGGCATTGT 1898
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj33008 1485 .................................................. 1485
ha07062 1899 GCTAAATGCTGGGGATACAGAGATGTTTGCAGAGGTAGTTGAAACATCTC 1948
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj33008 1485 .................................................. 1485
ha07062 1949 ACTCCTGCCATAGTGACTCAGGTAAGGTTGAGAATTTAGCTCTGTTAATC 1998
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj33008 1485 .................................................. 1485
ha07062 1999 TATTCAGAAGATGTCACTAAGAGTAAGTTGTTTCAGCACTCAAAAGCCGC 2048
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj33008 1485 .................................................. 1485
ha07062 2049 AAATCTGTAAATTGGATTAAGAACACCTGCCCTACCTACCCGGCAATAGT 2098
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj33008 1485 .................................................. 1485
ha07062 2099 GTGAATCCAAATGCTGCAATGTGAGATGAGGTACAAGTAAAGAGCTGTGT 2148
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj33008 1485 .................................................. 1485
ha07062 2149 TTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTG 2198
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj33008 1485 ............CTTCCTCCTCCTTCTCTTCCTCCTCCTTCTCTTCCTCC 1522
| | |||| | | |||| | | | |
ha07062 2199 CAGACAGGCAAGTCTGTTTTCCCTTGCCACCTTCCTTTGGGTTTGGTTGC 2248
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj33008 1523 TCTTT............................................. 1527
|||||
ha07062 2249 TCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTATTGGTTTGA 2298
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj33008 1528 .........CTCCTCCTCCTTCTCCTTCTTTCTCCTTCTGCTTCTTTCTC 1568
|| | | ||| | || | | | ||||||
ha07062 2299 GGGGAAAGGCTGGTTAGACGTCTTTGTATTGTCAATGGTTGGTTTTTCTC 2348
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj33008 1569 TTCCTCTTCCTCCTCTTCTATTTTGTTCTTCCTTC............... 1603
| | | | | | | |||||||||
ha07062 2349 TGGCAGTGTCAGTGTTAGAGCTATCATCTTCCTTCTTAAATGGCATGAGC 2398
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj33008 1604 .................................................. 1604
ha07062 2399 AATGAGCAAACTTCCCTCCTTTCAACATTCTCACCTACATCATGTGCCCC 2448
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj33008 1604 ..............................................CATT 1607
||||
ha07062 2449 TTGGCTCACCTACTGAGCTTGCCAACTTCTCTCAAAACCAATGCTGCATT 2498
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj33008 1608 TCCTTCCCCCACCTTTTTAATTGCACTGTCTTCATAGTATCACATTTGCC 1657
| || || | | |||||| || || | || || |
ha07062 2499 TTGGGAGAGCAGCTGTGAATGGGCACTGCCTAAATTGCCTC...TTGGGG 2545
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj33008 1658 AAAGGTGGCAGCTTTGGCACTAAAAGCCCTGAGAAGTGTTTTGCTTTCCT 1707
|| ||| | | | | || | | || | | |||
ha07062 2546 TAATCTGGAGGGTGGAGGTGTTAACTCAAACATAACCCTATGACTT.... 2591
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj33008 1708 AGACTGTGGGGTGAGCAGAGTGTGCCTGGGAATGTCTGCTTCCTCTTTGT 1757
|||| | | | || | | || || || || ||| |
ha07062 2592 .GACTCAGAGATATCCATTGACTTTGAGGATTAGTGTGTTTGCTC..AGG 2638
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj33008 1758 TCAGCTGGAGACAAGCAAGGGTGGAAGA....AGCCAGCCATTCACTCAC 1803
||| || | ||| || ||| |||| | | | | |||| |
ha07062 2639 CCAGTTGTA...CAGCCAGTGTGCAAGAGATTTGGTACCTTTGCACTAAT 2685
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj33008 1804 TCGTTCAGCTGGAGTGCAGTGAAAGTCCCTCGCAGGCACTGTGCTGAGTG 1853
| || | | | | | | | | ||||| || ||
ha07062 2686 GCACACACCAGTGTCTATTTCATTGGGTTTGGAATCCACTGGACTCTGTT 2735
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj33008 1854 CTGGAATACAGAGATCCATTGGTAATGGTCCTGCTCTAGACTGAATGGAA 1903
| |||| | ||| || | | | | | || |
ha07062 2736 GACCTAAACAGTTA.....GGGTTTTGATTTTTTTTGATATGCAAATTTA 2780
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj33008 1904 AATGGAAAAC........................................ 1913
|| || | |
ha07062 2781 TATTGAGATCATTTTCATATTCCTGTCTTTTGGTTTGTCTTTACTAAAGC 2830
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj33008 1914 .......GTGGTTCTCTGTCC............................. 1927
||||| || |||||
ha07062 2831 TTGGCTGGTGGTGCTGTGTCCCTAGAATTATCCCTGCAACCAACTCCCAA 2880
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj33008 1928 .................................................. 1928
ha07062 2881 GTTACAAGCTTCATTAAGAGCCTTAGACTCACTTTTTTCTAGCATCTTCT 2930
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj33008 1928 .................................................. 1928
ha07062 2931 GACCTGAGAAAATTCCACTGGGAGTAAAGGATAGTATCTTGTGTCATATG 2980
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj33008 1928 ............................AACTGGAAAAATCCGAGACTGT 1949
| |||| || |||| |
ha07062 2981 GGTCTTACTCTCCCTATTTTACCAATGAGAAAACAAAACTCAGAGAAAGA 3030
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj33008 1950 GCACCAGTTACTTCAGC..............TCTTTGGACCTGCAGGTCT 1985
|| | || | || | | | | || || |
ha07062 3031 TGACTTGCTAATACATCAAACCCATGTCCTTTTTATTGAACTATGCTGCC 3080
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj33008 1986 ATGAGATTAGAAGCCC..CTGCTCTGCCTACCCCACGCCATGAGTCCAGA 2033
|| |||| |||| | ||||| | | | ||| ||
ha07062 3081 ATTTAATTAACCGCCCTTCCCCTCTGAGGGAGTAAGGAAACAGATCCTGA 3130
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj33008 2034 GCCCACAAGAG....................................... 2044
| ||| |||
ha07062 3131 GTTCACTTGAGCACTTTCAAAAAAGCAAGCAGTTGATTGAATTTGGTGTC 3180
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj33008 2045 ACTGAACAGCTATATTTTGTACACCAGCATAGCAGTGGCTCAGCCTAACC 2094
| || ||| ||| |||| | | ||| | || | ||| || |||
ha07062 3181 AGAGAGGAGC.ATACTTTGCAAATCAG....GAAGAGTGACAG.CTTACC 3224
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj33008 2095 CTTTTCTTAAAGGGACAATCAAGGCAGCTGCCACCCCGTCCCCATGCCTT 2144
|| | || || | | | | || | | | ||
ha07062 3225 CTGTCCTGGAACCCTTATCCCA........CTTCCAGGCTGACTTTAGTT 3266
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj33008 2145 CATCATGTGGATGTAGTTGCTGCTCTTTGTATCCCTGTTTGCAGGTCCTC 2194
|| ||| | | | || | || | | || || | ||
ha07062 3267 GATAATGCACTTCTGGCTGTAAATGTTGCCAACACTTCCTGGTTTTGCTT 3316
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj33008 2195 ATTTCCACACAAAGGCCTACATTTCTGAACTGATTGGTG........... 2233
| | || ||||| | | | | || |||
ha07062 3317 AGGTACAGTGAAAGGGCATAGTGAGAGCTATTTTTAGTGATTCTGTTCTT 3366
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj33008 2234 ..........TGAGGGAAGAGCTAGGTGGGCATCTTTCCATTATTGGAAC 2273
| | | ||| | || | || || || | | |
ha07062 3367 TCTGTCAGCAACATGAAGGAGGGACGTTTGAATAATT...TTTGTTGTAG 3413
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj33008 2274 TTGGTCTTTTCTTGGAAGGATCTAAGTCCCTCTCCCTGAAGTGATGTGAG 2323
| | ||| || |||| | | | | | || | ||| |
ha07062 3414 AATATTTCTTCATGAAAGGCTTTTGG....GTGTCTTTAACAGGTGTTGG 3459
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj33008 2324 GTCAGCTCTCACCTACAGATACGTCTACCTGATGAGCATC.....TCAGA 2368
| || | | | | | || ||| || | || | |
ha07062 3460 GCTAGAGCCCCACCAGGAGTTGAACTGCCTCTTGGGGGTCAGGTTCCCTA 3509
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj33008 2369 ATGGATATATCTCCT.TTCCTCATTCTGAGAGAGC.CTGTGTGAGTGGAC 2416
||| | || ||| ||| | | | |||| | ||||| | |
ha07062 3510 GGAGATCTGTCACCTCTTCAGGAGTATTTGAGAACATTGTGTAGTTACAG 3559
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj33008 2417 ATTGACTGAACTGCCTTAGGGAGGAGTGATTGCCAGAGCTGGGTGGCATG 2466
|| ||| || ||| | ||| | |||| | | | |
ha07062 3560 CTTCACT.AAATGCACGTGACAGGCTTCTGTGCCTTGGGAGCCCTGGCTT 3608
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj33008 2467 GCTCTGAAGCATC..................................... 2479
||||| | ||
ha07062 3609 ATGCTGAAACTTCTGGCTGACCAGAGCAGTACAGCAACTTTGCCCTGTCT 3658
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj33008 2480 ................................................GC 2481
|
ha07062 3659 GTGTTCTGCTTCCTGGATGCATCCTTCAGCCACTAACCAGCATTGCAAGA 3708
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj33008 2482 TGGCTTTGGAGGGGCTTGCTTGGGCCAGCATGAT................ 2515
||| || | | ||| | | | | || |
ha07062 3709 TGGAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGT 3758
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj33008 2516 .................................................. 2516
ha07062 3759 TTTGATTATTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTG 3808
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj33008 2516 .......TGCTAGGGAAGGAGCTTGCTTCTGCTTCCTTGGTGCTTAGCTG 2558
| | || | | || | | | | ||| | ||| |
ha07062 3809 TGGCACCTCCCAGAAAGTCTGGTTTTTGCCCCATGTTTGATATTTACTAG 3858
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj33008 2559 ACTGCAGGTCTGGAGCTTGTATTTTTTTGTGTCTCAGTGGGGAATAGGA. 2607
| | | ||| |||| | || || ||| || ||| | ||
ha07062 3859 GCAGAAATTCT.....TTGTCCTGTTAACTGCCTCCTGGGAGAAAAAGAG 3903
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj33008 2608 .................................................. 2608
ha07062 3904 GCAATACAGAGTTAAATCCTTAATTTGCCCACTGAGACAGATGAGCTGTG 3953
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj33008 2608 .................................................. 2608
ha07062 3954 GTATTCCAAAAGACAAATTCTATGACTAGTGTCTCCTGTTCAATGTAAGT 4003
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj33008 2608 .................................................. 2608
ha07062 4004 GAGACCCTCTTTGGCCAATCTGCTTCTAGTCAAGGCTAAATGGATTGGAA 4053
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj33008 2608 ...........................................GAGTTTT 2614
|||||||
ha07062 4054 TAACCCTAGTTGGCCAGGCTACACATTGCCAGCATGTCCCGTTGAGTTTT 4103
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj33008 2615 GATTTTTTCCCCCCCCTCT....ATTTGAAAATTTTCATCTTTAGGCTCT 2660
||| || || | || | |||| | |||||||
ha07062 4104 AATTGCCTCATGTGGCTGTGGACTTTATGAGTCAATCATTTGTAGGCTCC 4153
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj33008 2661 ATCTTGCATATA....AATTTTGTAAGAAGGACATTTGTTAAGTTTT..C 2704
| ||||| || |||| ||| ||| ||||| ||||
ha07062 4154 AGTTTGCACCTAGTTTTTTTTTTTAAAAAGTGCATTTACACGCTTTTGGT 4203
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj33008 2705 TGTGATCTTGTATCAGAAATATGTGGGAGGTTTTGGTCAGTAATGCCAAG 2754
|| | || ||||| ||| ||| |||||||||||||| ||
ha07062 4204 AGTCCTGTTTTATCAAGAATCCATGGAGGGTTTTGGTCAGTACAGCTGGT 4253
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj33008 2755 ACAGGCTCTCCATGGAGTGTTAGTGG...................GTCAC 2785
|||| || || |||| ||||| | |
ha07062 4254 GCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAA 4303
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj33008 2786 AGGGCCACTGAGGGCTTTAGGTCTGGCCT..TTGCTTTCCATATTGAGGG 2833
| ||| | ||| |||| || ||| | | ||| | || || || |
ha07062 4304 ATGGCACCCCAGGACTTTGGGCCTGCCTTACTTGATAGCCTCGTTCAGTG 4353
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj33008 2834 CTCTTAG.....................TGACCAGCACATTGTTAACCAC 2862
| || || | || | ||| ||| | |
ha07062 4354 AGCAAAGACTTAGTGAGCAGCTCTTGTATGCCAAGTATTTTGCTAAGCTC 4403
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj33008 2863 ATGGACAGATAGAGGGGGCAGAGCCTGGAACTCTCAAGTGTAGTCCTCAG 2912
| | | | | | || | ||| || | | || | |
ha07062 4404 TGGAAAAAAGATA...AACAAGACATGGTTCT.TGCTTTCAAGGAGTGTG 4449
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj33008 2913 CCAGAGTCGGACCTTAGTTGAAAGGACACAAATGAAAGAAGAAAAAAAAA 2962
| | || | || || | | || ||| |
ha07062 4450 TAATTCTTTAGCCAGATATGGAAACCTGGACCCTGAGTGGGAGAAAGGAG 4499
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj33008 2963 GGAAAAGAAAAGAGTCAGCGA.TTTGTAAGTAAGACCTACCTG....... 3004
| | |||| ||||| | || ||||||| |||| || ||||
ha07062 4500 ACAGATGAAAGGAGTCCGTGATTTTGTAACCAAGAGCTGCCTGCATGGTT 4549
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj33008 3005 ........CACTGATTTTAGGCCCACCCCAAAAGAACAAGGCTTCCATT. 3045
||||||||||||| | ||||| | || || | ||
ha07062 4550 ATGAGTATCACTGATTTTAGGGACGCCCCACAGAGCTAAAGCATTTTTTT 4599
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj33008 3046 .....CAGAGGCC..ATGGTCCTCATATT.....TTCTTCTAGCTCAGA. 3082
||||| | || |||||||| ||||||||||| ||
ha07062 4600 AATCCGAGAGGACTTTTGTAACTCATATTAGTTAATCTTCTAGCTCTGAG 4649
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mfj33008 3083 TGAGCCACACAGCTCTTAGAACTGTCT.......TCCCCGAGTCCTTCTC 3125
||| ||||||||||||||| | | | | | |||| |||
ha07062 4650 ATAGCAACACAGCTCTTAGAATTCTGTAAGTAGCTTGAGGCCTCCTCCTC 4699
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mfj33008 3126 TGGCAATGATGCTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCA 3175
| ||| |||| ||| || | || | || ||| ||| |
ha07062 4700 TACTGTACATGTTCTTGCTTTCC.CAAAATTGTAAGTTTGGTTTTTCCTA 4748
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mfj33008 3176 .....CAGGCTATAATGGAACTTTCCTTCCCTGGGGAAAAAA.TACTGAG 3219
|| || |||| || |||| |||||| |||||||| | | ||
ha07062 4749 TGAACAAGACTGTAATTGATTTTTCTCTCCCTGAGGAAAAAAGTTCGGAA 4798
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mfj33008 3220 AATGAGTGCAGTGGATACTGAA.TATGGAACCCAGTGC.........ACA 3259
| | | |||||| || || | | || ||| |
ha07062 4799 TAAATGAGACATGGATATGAAACTACTTAGCACAATGCCTGGTACATATT 4848
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mfj33008 3260 CAGCGCTCAGCAGACACAGGTCTGCCATCCTTCCTTCAGTGCCAGCAGCA 3309
|| ||||||| | | | || || |||| | || ||
ha07062 4849 AGGCCCTCAGCAAATGTGGCTACCGTGTCATTATTTCATGGTGAGACTCA 4898
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mfj33008 3310 TAGGGCACCA........................................ 3319
| | ||
ha07062 4899 AGGCAAAACAAGATTCTTAATTTATGCTCCGTAAATGCTAGAGGCTTGGG 4948
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mfj33008 3320 ........TGTTTTCCAAGACTCATGAAACTG...CTTCTTGCCTTCAG. 3357
| | | | | | || || ||| || |||||| ||
ha07062 4949 CAATACGGTCTGTCCTGAAAAACAGGACTCTGTGTCTCATTGCCTCTAGA 4998
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mfj33008 3358 ATGCTTAGGCAACAGACTCTGTCCCTTATCTTTTTGAAAATACAAAACAA 3407
|| |||||| | ||| ||||| | | |||||| | | ||
ha07062 4999 ATCCTTAGGTAGCAGTTTCTGTTCACTGTCTTTT.....CTTTTTTAAAA 5043
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mfj33008 3408 AAATAGTCTCTGTATAATTATAGCCACT...........GTTATTCTGC. 3445
| || || | ||||| |||| | || ||||| |
ha07062 5044 ATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTACC 5093
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mfj33008 3446 ...TTTTTAAAAAG...AGAATTATTTTCATATTATGGTGGCAAATATGA 3489
||||||||||| | |||| ||| ||||| || | | || | |
ha07062 5094 TATTTTTTAAAAAGAACAAAATTTCTTTTATATTGTGACAGTACATTTTA 5143
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mfj33008 3490 AAAA.............................................. 3493
| ||
ha07062 5144 ATAAAGGAAAATTATTTTCTTCCCCCTACTCCCCCTCCTTTTTTTTTTCT 5193
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mfj33008 3494 .................................................. 3494
ha07062 5194 GGTAAAGACAGGGTCTCACTCTGTTGCCAGACTGGTCTCAAACTCCTGGC 5243
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mfj33008 3494 .................................................. 3494
ha07062 5244 CTCAAGTAACCCTTCTGTCTCAGCCTCCCAAAGTGCTGGGATTACAGGTG 5293
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mfj33008 3494 ..................GGGAAATCTGTTTTCTGTCTCAGTGGGAGTCC 3525
||||| | |||||| ||| | | |
ha07062 5294 TGTGCCACATGTCCGGCCAGGAAAATTATTTTCTATCTTAAAGAAACATA 5343
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mfj33008 3526 GTTGCATTTCAGTATGGTAGCTCAGTGAA....GACTCAGCTGTCACCCT 3571
||| ||||| || ||| | ||||| || ||||| | | ||| |
ha07062 5344 GTTACATTTTAGAATGTCAATTCAGTTAAATCTTTCTCAGTTTTTACCTT 5393
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mfj33008 3572 GAGGTAGCTC........................................ 3581
|| | ||||
ha07062 5394 TAGATGGCTCCTGGAAAGGCCAGCGTTCCTTTTCCCCTCTCTGAATTGAA 5443
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mfj33008 3582 ............................CCAGGCCTTCATCCCTCACCTC 3603
|||||||| || | |
ha07062 5444 AGCACTTGACCCCATGCTGCCCCTGCTTCCAGGCCTGTCTCAGTTGTCAT 5493
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mfj33008 3604 AGA..GCGAAACACTGGATCCAGCCCCTTTGTCACCATCACTTTTCTAGG 3651
| | | || | |||| ||| | || || || | |||||||
ha07062 5494 ATATTGTGAGTCCCTGGCACCATTACTGTTTTCTAAGCCAGTCTTCTAGG 5543
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mfj33008 3652 CCTGCCTT..CTGCTCCTGCTGTTCGCAGTTCACCTGTAGGATGCAGAGA 3699
|| ||| | | ||||| | | | ||| | ||| |
ha07062 5544 TCTTACTTTCAGGATGCTGCTTCATGGCATGAGGATATAGTTTACAGTGT 5593
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mfj33008 3700 CTCTCTAGTGTCTTGTTTTTAACTTT.TACGTTGAATATATTTTTAAAAA 3748
| | | || ||| | |||| | | || || ||| |||| ||||
ha07062 5594 TGTAGTTTTTTTTTTTTTAAAGCTTTGTTCTTTAAAAATACTTTTTAAAA 5643
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mfj33008 3749 AGAAATCTACTGGTTAGATTTTATCTTCTCACAGAATGTTTTTAGAGATT 3798
||||||||||||||||||||| | | | ||||||||||||||||
ha07062 5644 AGAAATCTACTGGTTAGATTTATTGTCTCACAAAAATGTTTTTAGAGATT 5693
5751 ----+----*----+----*----+----*----+----*----+----* 5800
mfj33008 3799 ATTTTGTTCACAGATGTTTCCTTTCTCATGCTGACGAGC....GACCTTT 3844
||||| |||||| |||||| |||||||||||||| || | || |||
ha07062 5694 ATTTTTTTCACAAATGTTTTCTTTCTCATGCTGATGATCAACTGATTTTT 5743
5801 ----+----*----+----*----+----*----+----*----+----* 5850
mfj33008 3845 GCCTACAGGTGTTCGCCTCTCACA.CGTCTTTTCAATATAGACTCTATTT 3893
| ||||||||||| || ||||||| | |||||| | |||| |||||||
ha07062 5744 GTCTACAGGTGTTAGCTTCTCACAGTATTTTTTCATTTTAGAGTCTATTT 5793
5851 ----+----*----+----*----+----*----+----*----+----* 5900
mfj33008 3894 ACCAATTTAC..TTAGTGTTTTTAAGAGGTACTGA.GCATTGAGGTATGT 3940
||||| | || || | | |||| ||||||||| | ||||||||||||
ha07062 5794 ACCAAATGACCATTTTTAGTGTTAAAAGGTACTGAGGAATTGAGGTATGT 5843
5901 ----+----*----+----*----+----*----+----*----+----* 5950
mfj33008 3941 AAATCAGGTGACATAAACATGGAAAATGATGTGCCTAACTATTTTTTTAA 3990
|||||||||||||||||||| |||||| |||||||||| ||||||| |||
ha07062 5844 AAATCAGGTGACATAAACAT.GAAAATTATGTGCCTAAATATTTTTGTAA 5892
5951 ----+----*----+----*----+- 5976
mfj33008 3991 TGATGTCAAATAAATACTTTTTCTGG 4016
|| ||| |||||||||||||||| |
ha07062 5893 TGGTGTAAAATAAATACTTTTTCCTG 5918