# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj32170.fasta.nr -Q ../query/mKIAA4027.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4027, 287 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7914319 sequences Expectation_n fit: rho(ln(x))= 5.6078+/-0.0002; mu= 8.6936+/- 0.011 mean_var=105.7424+/-20.504, 0's: 29 Z-trim: 33 B-trim: 1300 in 1/66 Lambda= 0.124724 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|73985024|ref|XP_541784.2| PREDICTED: similar to ( 307) 1799 333.6 2.6e-89 gi|148667025|gb|EDK99441.1| lipoma HMGIC fusion pa ( 270) 1770 328.4 8.8e-88 gi|81865508|sp|Q7TSY2.1|LHPL4_RAT RecName: Full=Li ( 247) 1701 315.9 4.5e-84 gi|26338087|dbj|BAC32729.1| unnamed protein produc ( 247) 1700 315.7 5.1e-84 gi|122133629|sp|Q17R16.1|LHPL4_BOVIN RecName: Full ( 247) 1693 314.5 1.2e-83 gi|109034741|ref|XP_001096555.1| PREDICTED: simila ( 247) 1687 313.4 2.6e-83 gi|74713775|sp|Q7Z7J7.1|LHPL4_HUMAN RecName: Full= ( 247) 1683 312.7 4.3e-83 gi|134024298|gb|AAI36167.1| LOC100125066 protein [ ( 222) 1408 263.1 3.1e-68 gi|189520684|ref|XP_001922233.1| PREDICTED: simila ( 234) 1264 237.2 2e-60 gi|109471594|ref|XP_575331.2| PREDICTED: similar t ( 229) 1222 229.7 3.8e-58 gi|149704703|ref|XP_001489328.1| PREDICTED: simila ( 231) 1222 229.7 3.8e-58 gi|120538503|gb|AAI29939.1| LHFPL3 protein [Homo s ( 232) 1222 229.7 3.8e-58 gi|114615290|ref|XP_527854.2| PREDICTED: similar t ( 230) 1221 229.5 4.3e-58 gi|47220897|emb|CAG03104.1| unnamed protein produc ( 216) 1219 229.1 5.3e-58 gi|124486999|ref|NP_001074700.1| lipoma HMGIC fusi ( 218) 1216 228.6 7.7e-58 gi|120538345|gb|AAI29938.1| Lipoma HMGIC fusion pa ( 236) 1215 228.4 9.2e-58 gi|119603750|gb|EAW83344.1| hCG2039935 [Homo sapie ( 229) 1214 228.2 1e-57 gi|30102449|gb|AAP14954.1| lipoma HMGIC fusion-par ( 236) 1214 228.2 1e-57 gi|224093050|ref|XP_002188604.1| PREDICTED: simila ( 252) 1208 227.2 2.3e-57 gi|109892510|sp|Q86UP9.2|LHPL3_HUMAN RecName: Full ( 222) 1207 227.0 2.4e-57 gi|109892511|sp|Q9CTN8.2|LHPL3_MOUSE RecName: Full ( 222) 1191 224.1 1.8e-56 gi|12861652|dbj|BAB32253.1| unnamed protein produc ( 221) 1184 222.8 4.2e-56 gi|169642626|gb|AAI60481.1| LOC100145306 protein [ ( 217) 1163 219.0 5.7e-55 gi|82181271|sp|Q66IV3.1|LHPL3_XENLA RecName: Full= ( 218) 1151 216.9 2.6e-54 gi|82183231|sp|Q6DHB5.1|LHPL3_DANRE RecName: Full= ( 216) 1109 209.3 4.8e-52 gi|47206896|emb|CAF90029.1| unnamed protein produc ( 213) 1082 204.5 1.4e-50 gi|189524845|ref|XP_686620.3| PREDICTED: similar t ( 223) 1077 203.6 2.7e-50 gi|109067763|ref|XP_001085661.1| PREDICTED: simila ( 220) 1073 202.8 4.3e-50 gi|197127392|gb|ACH43890.1| putative peripheral my ( 221) 1047 198.2 1.1e-48 gi|82097638|sp|Q7ZZL8.1|TMHS_CHICK RecName: Full=T ( 221) 1047 198.2 1.1e-48 gi|47211663|emb|CAF96119.1| unnamed protein produc ( 211) 1034 195.8 5.4e-48 gi|194040381|ref|XP_001927281.1| PREDICTED: simila ( 340) 1009 191.5 1.7e-46 gi|194223440|ref|XP_001494667.2| PREDICTED: simila ( 281) 1004 190.5 2.8e-46 gi|119915083|ref|XP_606243.3| PREDICTED: similar t ( 219) 997 189.2 5.6e-46 gi|187955484|gb|AAI47843.1| Tmhs protein [Mus musc ( 249) 997 189.2 6.2e-46 gi|81883200|sp|Q5PPI7.1|TMHS_RAT RecName: Full=Tet ( 219) 995 188.8 7.2e-46 gi|193785225|dbj|BAG54378.1| unnamed protein produ ( 219) 994 188.6 8.2e-46 gi|73972668|ref|XP_538882.2| PREDICTED: similar to ( 289) 994 188.7 1e-45 gi|148690634|gb|EDL22581.1| tetraspan transmembran ( 216) 991 188.1 1.2e-45 gi|109070878|ref|XP_001112357.1| PREDICTED: simila ( 272) 992 188.4 1.2e-45 gi|158253822|gb|AAI53983.1| Zgc:171589 protein [Da ( 216) 990 187.9 1.3e-45 gi|74751349|sp|Q8TAF8.1|TMHS_HUMAN RecName: Full=T ( 219) 990 187.9 1.4e-45 gi|169158532|emb|CAQ13321.1| novel protein similar ( 221) 990 187.9 1.4e-45 gi|149555415|ref|XP_001516205.1| PREDICTED: simila ( 258) 973 184.9 1.3e-44 gi|126309909|ref|XP_001378667.1| PREDICTED: simila ( 243) 970 184.4 1.8e-44 gi|194041298|ref|XP_001925779.1| PREDICTED: simila ( 163) 932 177.3 1.5e-42 gi|119584368|gb|EAW63964.1| lipoma HMGIC fusion pa ( 179) 932 177.4 1.6e-42 gi|118096962|ref|XP_001234277.1| PREDICTED: hypoth ( 158) 886 169.1 4.6e-40 gi|55729650|emb|CAH91554.1| hypothetical protein [ ( 148) 807 154.8 8.4e-36 gi|194041302|ref|XP_001925926.1| PREDICTED: simila ( 115) 766 147.3 1.2e-33 >>gi|73985024|ref|XP_541784.2| PREDICTED: similar to HMG (307 aa) initn: 1787 init1: 1753 opt: 1799 Z-score: 1759.8 bits: 333.6 E(): 2.6e-89 Smith-Waterman score: 1799; 92.657% identity (95.455% similar) in 286 aa overlap (9-287:23-307) 10 20 30 mKIAA4 ALPVPDQPSRLGPAPA--PR-PVV----SPGPAAPCQPLPPAPPPG :: .:::: :: :.: . :: : .: ::::::: gi|739 MAKVGEAPPQAPPSRVLGSGRLSRASPAPARQPRSPAVGRSRAGGPRQPPSP-PPAPPPG 10 20 30 40 50 40 50 60 70 80 90 mKIAA4 TMLPSQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TMLPSQEASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYF 60 70 80 90 100 110 100 110 120 130 140 150 mKIAA4 GLFHYCVGSGLAGRELTCRGSFTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFALFFFC ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|739 GLFHYCVGSGLAGRELTCRGSFTDFSTIPSGAFKAAAFFVLLSMVLILGCITCFALFFFC 120 130 140 150 160 170 160 170 180 190 200 210 mKIAA4 NTATVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYIL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|739 NTATVYKICAWMQLLAALCLVLGCMIFPDGWDAETIRDMCGTKTGKYSLGDCSVRWAYIL 180 190 200 210 220 230 220 230 240 250 260 270 mKIAA4 AIIGILNALILSFLAFVLGNRQTDLLQEELKQENKDFVGTTVSSVLRPGGDVSGWGVLPC :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|739 AIIGILNALILSFLAFVLGNRQTDLLQEELKQENKDFVGSTVSSVLRPGGDVSGWGVLPC 240 250 260 270 280 290 280 mKIAA4 PVAHTQGP ::::.::: gi|739 PVAHSQGP 300 >>gi|148667025|gb|EDK99441.1| lipoma HMGIC fusion partne (270 aa) initn: 1770 init1: 1770 opt: 1770 Z-score: 1732.3 bits: 328.4 E(): 8.8e-88 Smith-Waterman score: 1770; 100.000% identity (100.000% similar) in 254 aa overlap (1-254:1-254) 10 20 30 40 50 60 mKIAA4 ALPVPDQPSRLGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ALPVPDQPSRLGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSR 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA4 AIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGS 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA4 FTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLV 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA4 LGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNR 190 200 210 220 230 240 250 260 270 280 mKIAA4 QTDLLQEELKQENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP :::::::::::::: gi|148 QTDLLQEELKQENKGKFRGHYSKFRAAARR 250 260 270 >>gi|81865508|sp|Q7TSY2.1|LHPL4_RAT RecName: Full=Lipoma (247 aa) initn: 1701 init1: 1701 opt: 1701 Z-score: 1665.7 bits: 315.9 E(): 4.5e-84 Smith-Waterman score: 1701; 100.000% identity (100.000% similar) in 247 aa overlap (41-287:1-247) 20 30 40 50 60 70 mKIAA4 LGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSRAIGVLWAIFT :::::::::::::::::::::::::::::: gi|818 MLPSQEASKLYHEHYMRNSRAIGVLWAIFT 10 20 30 80 90 100 110 120 130 mKIAA4 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK 160 170 180 190 200 210 260 270 280 mKIAA4 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP ::::::::::::::::::::::::::::::::::::: gi|818 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP 220 230 240 >>gi|26338087|dbj|BAC32729.1| unnamed protein product [M (247 aa) initn: 1700 init1: 1700 opt: 1700 Z-score: 1664.7 bits: 315.7 E(): 5.1e-84 Smith-Waterman score: 1700; 99.595% identity (100.000% similar) in 247 aa overlap (41-287:1-247) 20 30 40 50 60 70 mKIAA4 LGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSRAIGVLWAIFT :::::::::::::::::::::::::::::: gi|263 MLPSQEASKLYHEHYMRNSRAIGVLWAIFT 10 20 30 80 90 100 110 120 130 mKIAA4 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DAETVRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK 160 170 180 190 200 210 260 270 280 mKIAA4 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP ::::::::::::::::::::::::::::::::::::: gi|263 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP 220 230 240 >>gi|122133629|sp|Q17R16.1|LHPL4_BOVIN RecName: Full=Lip (247 aa) initn: 1693 init1: 1693 opt: 1693 Z-score: 1657.9 bits: 314.5 E(): 1.2e-83 Smith-Waterman score: 1693; 99.190% identity (100.000% similar) in 247 aa overlap (41-287:1-247) 20 30 40 50 60 70 mKIAA4 LGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSRAIGVLWAIFT :::::::::::::::::::::::::::::: gi|122 MLPSQEASKLYHEHYMRNSRAIGVLWAIFT 10 20 30 80 90 100 110 120 130 mKIAA4 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|122 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSG 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK 160 170 180 190 200 210 260 270 280 mKIAA4 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP ::::::::.:::::::::::::::::::::::::::: gi|122 QENKDFVGSTVSSVLRPGGDVSGWGVLPCPVAHTQGP 220 230 240 >>gi|109034741|ref|XP_001096555.1| PREDICTED: similar to (247 aa) initn: 1687 init1: 1687 opt: 1687 Z-score: 1652.1 bits: 313.4 E(): 2.6e-83 Smith-Waterman score: 1687; 98.785% identity (99.595% similar) in 247 aa overlap (41-287:1-247) 20 30 40 50 60 70 mKIAA4 LGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSRAIGVLWAIFT :::::::::::::::::::::::::::::: gi|109 MLPSQEASKLYHEHYMRNSRAIGVLWAIFT 10 20 30 80 90 100 110 120 130 mKIAA4 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK 160 170 180 190 200 210 260 270 280 mKIAA4 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP :::::::.::::::::::::::::::::::::.::: gi|109 PENKDFVGSTVSSVLRPGGDVSGWGVLPCPVAHSQGP 220 230 240 >>gi|74713775|sp|Q7Z7J7.1|LHPL4_HUMAN RecName: Full=Lipo (247 aa) initn: 1683 init1: 1683 opt: 1683 Z-score: 1648.2 bits: 312.7 E(): 4.3e-83 Smith-Waterman score: 1683; 98.381% identity (99.595% similar) in 247 aa overlap (41-287:1-247) 20 30 40 50 60 70 mKIAA4 LGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSRAIGVLWAIFT :::::::::::::::::::::::::::::: gi|747 MLPSQEASKLYHEHYMRNSRAIGVLWAIFT 10 20 30 80 90 100 110 120 130 mKIAA4 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|747 AFKAAAFFVLLSMVLILGCITCFSLFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK 160 170 180 190 200 210 260 270 280 mKIAA4 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP :::::::.::::::::::::::::::::::::.::: gi|747 PENKDFVGSTVSSVLRPGGDVSGWGVLPCPVAHSQGP 220 230 240 >>gi|134024298|gb|AAI36167.1| LOC100125066 protein [Xeno (222 aa) initn: 1408 init1: 1408 opt: 1408 Z-score: 1381.3 bits: 263.1 E(): 3.1e-68 Smith-Waterman score: 1408; 92.237% identity (99.087% similar) in 219 aa overlap (41-259:1-219) 20 30 40 50 60 70 mKIAA4 LGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSRAIGVLWAIFT ::::::::::::..:::::::::::::::: gi|134 MLPSQEASKLYHDNYMRNSRAIGVLWAIFT 10 20 30 80 90 100 110 120 130 mKIAA4 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS ::::::::::::::::.::::.:::::::::::::::.:.:.:::::::::::::::::. gi|134 ICFAIINVVVFIQPYWIGDSVNTPKPGYFGLFHYCVGNGVANRELTCRGSFTDFSTIPSG 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW :::::::::::::::::::::::::::::::::::::::::::.::.::::.:::::::: gi|134 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLFAAVCLVLACMIFPDGW 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK :.:::::::: ::::::::::::::::::::::::::::::::::::::::.:::.:::: gi|134 DSETIRDMCGEKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQNDLLHEELK 160 170 180 190 200 210 260 270 280 mKIAA4 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP .::::::: gi|134 ADNKDFVGTARI 220 >>gi|189520684|ref|XP_001922233.1| PREDICTED: similar to (234 aa) initn: 1264 init1: 1264 opt: 1264 Z-score: 1241.0 bits: 237.2 E(): 2e-60 Smith-Waterman score: 1264; 81.567% identity (95.853% similar) in 217 aa overlap (41-257:1-217) 20 30 40 50 60 70 mKIAA4 LGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSRAIGVLWAIFT :::::::::.::..:::::::::::::::: gi|189 MLPSQEASKIYHDNYMRNSRAIGVLWAIFT 10 20 30 80 90 100 110 120 130 mKIAA4 ICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGSFTDFSTIPSS :::: :::::::::::.:::::::. :::::::::::.: ..::: :.:.:.:::.:::. gi|189 ICFATINVVVFIQPYWIGDSVSTPHAGYFGLFHYCVGDGNSNRELICQGTFSDFSSIPSG 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 AFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLVLGCMIFPDGW :::::.:::::::::::.::.:.::::::::::::: ::::::: :.::::::.:::::: gi|189 AFKAASFFVLLSMVLILSCIACMALFFFCNTATVYKTCAWMQLLCAVCLVLGCLIFPDGW 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 DAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNRQTDLLQEELK :::.:::::: .::::.::.:::::::::::::::.:::::::::::::::.:....:.: gi|189 DAEVIRDMCGEETGKYTLGNCSVRWAYILAIIGILDALILSFLAFVLGNRQNDFMHDEIK 160 170 180 190 200 210 260 270 280 mKIAA4 QENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP ::: .: gi|189 AENKVIVSQYPKFSYLYLTTVTLL 220 230 >>gi|109471594|ref|XP_575331.2| PREDICTED: similar to li (229 aa) initn: 1216 init1: 807 opt: 1222 Z-score: 1200.3 bits: 229.7 E(): 3.8e-58 Smith-Waterman score: 1222; 76.000% identity (90.667% similar) in 225 aa overlap (31-255:2-225) 10 20 30 40 50 60 mKIAA4 ALPVPDQPSRLGPAPAPRPVVSPGPAAPCQPLPPAPPPGTMLPSQEASKLYHEHYMRNSR : : ..:::.:::.:::: .:.:::: gi|109 MPGAAAAAAAAMLPAQEAAKLYHTNYVRNSR 10 20 30 70 80 90 100 110 120 mKIAA4 AIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGLFHYCVGSGLAGRELTCRGS :::::::::::::::.::: ::::::.::.:.::. :::::::::.:.:.. :::::::: gi|109 AIGVLWAIFTICFAIVNVVCFIQPYWIGDGVDTPQAGYFGLFHYCIGNGFS-RELTCRGS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 FTDFSTIPSSAFKAAAFFVLLSMVLILGCITCFALFFFCNTATVYKICAWMQLLAALCLV ::::::.::.:::::.::. :::.::..::.::.::::::::::::::::::: .: ::: gi|109 FTDFSTLPSGAFKAASFFIGLSMMLIIACIVCFTLFFFCNTATVYKICAWMQLTSAACLV 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 LGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYILAIIGILNALILSFLAFVLGNR :::::::::::.. .. ::: :: ::.:: :::::::::::::::.:::::::::::::: gi|109 LGCMIFPDGWDSDEVKRMCGEKTDKYTLGACSVRWAYILAIIGILDALILSFLAFVLGNR 160 170 180 190 200 210 250 260 270 280 mKIAA4 QTDLLQEELKQENKDFVGTTVSSVLRPGGDVSGWGVLPCPVAHTQGP : .:. :::: :::: gi|109 QDSLMAEELKAENKDDGNA 220 287 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 03:25:48 2009 done: Tue Mar 17 03:31:19 2009 Total Scan time: 770.160 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]