FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4211.ptfa, 314 aa vs ./tmplib.26680 library 1768703 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.9423+/-0.00391; mu= 15.3889+/- 0.263 mean_var=66.6628+/-15.069, 0's: 0 Z-trim: 7 B-trim: 0 in 0/36 Lambda= 0.1571 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0866 ( 1984 res) mtg01789 (1984) 921 219 2.2e-57 mKIAA3005 ( 1833 res) mbg08806 (1833) 904 215 3.1e-56 mKIAA2034 ( 1729 res) meh02376 (1729) 879 209 1.5e-54 mFLJ00293 ( 1022 res) msh04332 (1022) 471 116 7.4e-27 mFLJ00395 ( 711 res) msj07104 ( 711) 347 88 1.7e-18 mKIAA0865 ( 1183 res) mbp09319 (1183) 329 84 3.9e-17 mKIAA0216 ( 2048 res) mib13036 (2048) 173 49 2.4e-06 >>mKIAA0866 ( 1984 res) mtg01789 (1984 aa) initn: 862 init1: 542 opt: 921 Z-score: 1122.5 bits: 218.5 E(): 2.2e-57 Smith-Waterman score: 921; 51.712% identity (54.122% ungapped) in 292 aa overlap (19-301:388-675) 10 20 30 40 mKIAA4 RGRLRRMPIGKHFLICVTTVADKAAYLQCLNSADLLKALCYPRVKVGN :.:.:. .: .: .:. .:. ::.::: mKIAA0 ILKVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLVGINVTDFTRAILTPRIKVGR 360 370 380 390 400 410 50 60 70 80 90 100 mKIAA4 EYVTKGQTVQQVYNAVGALAKAVYEKMFLWMVTRINQQLDTKQPRQ--YFIGVLDIAGFE . : :.:: .:. :. :::::.::..: :...:.:. :: : :: :.:.::::::: mKIAA0 DVVQKAQTKEQADFAIEALAKATYERLFRWILSRVNKALD-KTHRQGASFLGILDIAGFE 420 430 440 450 460 470 110 120 130 140 150 160 mKIAA4 IFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLAACIELIEK ::. ::.::::::.:::::::.::: ::.::::::..:::::.:::::.:: ::::::. mKIAA0 IFEVNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIER 480 490 500 510 520 530 170 180 190 200 210 220 mKIAA4 P---LGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFSLVHYA : :....:.::: :::::: :: .:: ... :. .::::: : :.: ::..::: mKIAA0 PNNPPGVLALLDEECWFPKATDKSFVEKLCSEQ-GNHPKFQKPKQLKDKTE--FSIIHYA 540 550 560 570 580 590 230 240 250 260 270 280 mKIAA4 GTVDYNITGWLDKNKDPLNDTVVGLYQKSAMKTLASLFSTYASAEA-DGGAKKGAKKKGS : :::: ..:: :: :::::.:..: . :. : .:.:.. . : :: .. : mKIAA0 GKVDYNASAWLTKNMDPLNDNVTSLLNASSDKFVADLWKDVDRIVGLDQMAKMTESSLPS 600 610 620 630 640 650 290 300 310 mKIAA4 SFQTVSALFRVK---YKFRLGKKVYSVSMYYICAI . .: ...::. :: .::: mKIAA0 ASKTKKGMFRTVGQLYKEQLGKLMTTLRNTTPNFVRCIIPNHEKRSGKLDAFLVLEQLRC 660 670 680 690 700 710 >>mKIAA3005 ( 1833 res) mbg08806 (1833 aa) initn: 888 init1: 545 opt: 904 Z-score: 1102.1 bits: 214.6 E(): 3.1e-56 Smith-Waterman score: 904; 51.613% identity (53.137% ungapped) in 279 aa overlap (19-292:233-508) 10 20 30 40 mKIAA4 RGRLRRMPIGKHFLICVTTVADKAAYLQCLNSADLLKALCYPRVKVGN :::.: .: .: .. .:. ::.::: mKIAA3 MLKVVSSVLQFGNISFKKERNTDQASMPENTVAQKLCHLLGMNVMEFTRAILTPRIKVGR 210 220 230 240 250 260 50 60 70 80 90 100 mKIAA4 EYVTKGQTVQQVYNAVGALAKAVYEKMFLWMVTRINQQLD-TKQPRQYFIGVLDIAGFEI .:: :.:: .:. :: :::::.::..: :.: :::. :: ::. :::.:::::::: mKIAA3 DYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALDRTKRQGASFIGILDIAGFEI 270 280 290 300 310 320 110 120 130 140 150 160 mKIAA4 FDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLAACIELIEKP :..::.::::::.:::::::.::: ::.::::::..:::::.:::::.:: ::.:::.: mKIAA3 FELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIDLIERP 330 340 350 360 370 380 170 180 190 200 210 220 mKIAA4 L---GIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFSLVHYAG :....:.::: :::::: .: .:: :. :. ..::::. : ::. : ..:::: mKIAA3 ANPPGVLALLDEECWFPKATDKTFVEKLV-QEQGSHSKFQKPRQLKDKAD--FCIIHYAG 390 400 410 420 430 230 240 250 260 270 280 mKIAA4 TVDYNITGWLDKNKDPLNDTVVGLYQKSAMKTLASLFSTYASAEA-DGGAKKGAKKKGSS :::. :: :: :::::.:. : ..:. . .: :.. . : . ::. mKIAA3 KVDYKADEWLMKNMDPLNDNVATLLHQSSDRFVAELWKDVDRIVGLDQVTGMTETAFGSA 440 450 460 470 480 490 290 300 310 mKIAA4 FQTVSALFRVKYKFRLGKKVYSVSMYYICAI ..: ...::. mKIAA3 YKTKKGMFRTVGQLYKESLTKLMATLRNTNPNFVRCIIPNHEKRAGKLDPHLVLDQLRCN 500 510 520 530 540 550 >>mKIAA2034 ( 1729 res) meh02376 (1729 aa) initn: 782 init1: 503 opt: 879 Z-score: 1071.7 bits: 208.9 E(): 1.5e-54 Smith-Waterman score: 879; 49.123% identity (51.852% ungapped) in 285 aa overlap (19-292:128-408) 10 20 30 40 mKIAA4 RGRLRRMPIGKHFLICVTTVADKAAYLQCLNSADLLKALCYPRVKVGN :.:.: : :. .:. .:: ::.::: mKIAA2 MLRTVSAVLQFGNIVLKKERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGR 100 110 120 130 140 150 50 60 70 80 90 100 mKIAA4 EYVTKGQTVQQVYNAVGALAKAVYEKMFLWMVTRINQQLDTKQPRQ--YFIGVLDIAGFE .:: :.:: .:. :. :::::.::..: :.: :.:. :: ..::: :.:.::::::: mKIAA2 DYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALD-RSPRQGASFLGILDIAGFE 160 170 180 190 200 210 110 120 130 140 150 160 mKIAA4 IFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLAACIELIEK ::..::.::::::.:::::::.::: :::::::::..::: :::.:::.:: ::.:::. mKIAA2 IFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIER 220 230 240 250 260 270 170 180 190 200 210 220 mKIAA4 PL---GIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFSLVHYA : :....:.::: :::::: :: .:. :. :. .::.:. . .:. ::..::: mKIAA2 PANPPGLLALLDEECWFPKATDKSFVEKVA-QEQGSHPKFQRPRNLRDQAD--FSVLHYA 280 290 300 310 320 330 230 240 250 260 270 mKIAA4 GTVDYNITGWLDKNKDPLNDTVVGLYQKSAMKTLASLFSTYA------SAEADGGAKKGA : :::. . :: :: :::::.:..: ..:. . : ... .. . : . :. mKIAA2 GKVDYKASEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSLGDGPPGG 340 350 360 370 380 390 280 290 300 310 mKIAA4 KKKGSSFQTVSALFRVKYKFRLGKKVYSVSMYYICAI . . . :.::. :.. mKIAA2 RPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNG 400 410 420 430 440 450 >>mFLJ00293 ( 1022 res) msh04332 (1022 aa) initn: 397 init1: 239 opt: 471 Z-score: 574.6 bits: 116.2 E(): 7.4e-27 Smith-Waterman score: 475; 37.692% identity (40.833% ungapped) in 260 aa overlap (20-261:306-563) 10 20 30 40 mKIAA4 RGRLRRMPIGKHFLICVTTVADKA--AYLQCLNSA--DL-LKALCYPRV :::.: .:. :... :: :..: : mFLJ00 IHRILAAILHLGNIEFVETEENGPQKGGLEVADEALVGYVAKLTATPRDLVLRTLLARTV 280 290 300 310 320 330 50 60 70 80 90 mKIAA4 KVGN-EYVTKGQTVQQVYNAVGALAKAVYEKMFLWMVTRINQQLD--TKQPR----QYFI :. : . :..:: .. : : :::.:...: :.:..::. .. ...:: . : mFLJ00 ASGGREVIEKSHTVAEASYARDACAKAMYQRLFEWVVNKINSIMEPRNRDPRCDGKDTVI 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA4 GVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDL ::::: :::.: ::.::.:::. ::::::.: . .. :::::..::: : :.. .. mFLJ00 GVLDIYGFEVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQEEYEREGIAWQTIEY-FNN 400 410 420 430 440 450 160 170 180 190 200 210 mKIAA4 AACIELIEKPL-GIFSILEEECMFP-KATDTSFKNKLYDQHLGKSNNFQKPK--PAKGKA :. .::.:.: ::...:.: : :: : . : : : . .... . :. mFLJ00 ATIVELVEQPRRGILAVLDEACSTAGPITDRIFLQTL-DTHHRHHPHYSSRQLCPTDKTM 460 470 480 490 500 510 220 230 240 250 260 270 mKIAA4 E--AHFSLVHYAGTVDYNITGWLDKNKDPLNDTVVGLYQKSAMKTLASLFSTYASAEADG : :.. :::: : :.. :..:::.: : . : .:. :: ... mFLJ00 EFGRDFQIKHYAGDVTYSVEGFIDKNRDSLFQDFKRLLYNSVDPTLRAMWPDGQQDITEV 520 530 540 550 560 570 280 290 300 310 mKIAA4 GAKKGAKKKGSSFQTVSALFRVKYKFRLGKKVYSVSMYYICAI mFLJ00 TKRPLTAGTLFKNSMVALVENLASKEPFYVRCIKPNEDKVAGRLDEAHCRHQVEYLGLLE 580 590 600 610 620 630 >>mFLJ00395 ( 711 res) msj07104 (711 aa) initn: 303 init1: 204 opt: 347 Z-score: 424.4 bits: 87.9 E(): 1.7e-18 Smith-Waterman score: 347; 38.071% identity (42.614% ungapped) in 197 aa overlap (104-290:2-187) 80 90 100 110 120 130 mKIAA4 KMFLWMVTRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHM :::::. :..::.::::.::::::.: . mFLJ00 YGFEIFQKNGFEQFCINFVNEKLQQIFIELT 10 20 30 140 150 160 170 180 190 mKIAA4 FVLEQEEYKKEGIEWTFIDFGMDLAACIELIEK---PLGIFSILEEECMFPKATDTSFKN . ::::: .:::.:: :.. . .: .:::. : ::.:.:.. : .:: . mFLJ00 LKAEQEEYVQEGIRWTPIEYFNNKIVC-DLIENKLSPPGIMSVLDDVCATMHATGGG--- 40 50 60 70 80 200 210 220 230 240 mKIAA4 KLYDQHLGKSNNFQKPKPAKGKAE------AHFSLVHYAGTVDYNITGWLDKNKDPLNDT :: : .:: . : : : : : . :::: :.:...:. ..:.: : . mFLJ00 --ADQTL-----LQKLQAAVGTHEHFNSWSAGFVIHHYAGKVSYDVSGFCERNRDVLFSD 90 100 110 120 130 140 250 260 270 280 290 300 mKIAA4 VVGLYQKSAMKTLASLFSTYASAEADG-GAKKGAKKKGSSFQTVSALFRVKYKFRLGKKV .. :.:.: . : :: . . : . :.: : .. . ::.: mFLJ00 LIELMQSSDQDFLRMLFPEKLNIDKKGRPSTAGSKIKKQANDLVSTLKKCTPHYIRCIKP 150 160 170 180 190 200 310 mKIAA4 YSVSMYYICAI mFLJ00 NETKRPRDWEESRVKHQVEYLGLRENIRVRRAGFAYRRQFSKFLQRYAILTPETWPRWRG 210 220 230 240 250 260 >>mKIAA0865 ( 1183 res) mbp09319 (1183 aa) initn: 255 init1: 175 opt: 329 Z-score: 399.9 bits: 84.1 E(): 3.9e-17 Smith-Waterman score: 329; 31.797% identity (34.500% ungapped) in 217 aa overlap (64-266:1-214) 40 50 60 70 80 90 mKIAA4 DLLKALCYPRVKVGNEYVTKGQTVQQVYNAVGALAKAVYEKMFLWMVTRIN---QQLDTK :. :::..: ..: .... .: :. : mKIAA0 VNLLAKSLYSRLFGFLINTVNCCLQNQDEY 10 20 30 100 110 120 130 140 mKIAA4 QPRQYF-IGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWT . : . ::.::: ::: :. : .::::.:.::::....... .:. :: : .::. mKIAA0 KSLQTLDIGILDIFGFEEFQKNEFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAME 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 FIDFGMDLAACIELI-EKPLGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNN----FQ . :. .... .:: :.::.:.:: . . . .. :: : : .:.: .. mKIAA0 TACSPGNQAGVLDFFFQKPSGFFSLLDEESQVIWSGEPNLPRKL--QGLLESSNTNAVYS 100 110 120 130 140 210 220 230 240 250 mKIAA4 KPKPAKGKAE-----AHFSLVHYAGTVDYNITGWLDKNKDPLNDTVVGLYQKSAMKTLAS : ..:.. : :...:::: : :.. : .. ::: :..... ... : ... mKIAA0 PVKDGNGNVAFKGQGAAFTVMHYAGRVMYEMGGAVE-NKDSLSQNLLFVMKTSENVVISH 150 160 170 180 190 200 260 270 280 290 300 310 mKIAA4 LFSTYASAEADGGAKKGAKKKGSSFQTVSALFRVKYKFRLGKKVYSVSMYYICAI ::.. : mKIAA0 LFQSKLSQTGSLISSYPSFKFGGHKSTLLSKRTASSMVGVNKNYLELSKLLKKKGTSTFL 210 220 230 240 250 260 >>mKIAA0216 ( 2048 res) mib13036 (2048 aa) initn: 190 init1: 108 opt: 173 Z-score: 206.2 bits: 49.0 E(): 2.4e-06 Smith-Waterman score: 301; 24.828% identity (27.481% ungapped) in 290 aa overlap (12-276:713-999) 10 20 30 40 mKIAA4 RGRLRRMPIGKHFLICVTTVADKAAYLQCLNSADLLKALCY ..: : ..: . . :... : .. . mKIAA0 YHLGAAGATKEAAEAGRKQFARHEWAQKAAYLLGCSLEELSSAIFKHQLKGGTLQRSTSF 690 700 710 720 730 740 50 60 70 80 90 100 mKIAA4 PRVKVGNEYVTKGQTVQ-QVYNAVGALAKAVYEKMFLWMVTRINQQLDTKQPRQYFIGVL . : : :. .. .. . . ..:...: ..: ... .:. : ..: . .. mKIAA0 ---RQGPEESGLGEGTKLSALECLEGMASGLYSELFTLLISLVNRALKSSQHSLCSMMIV 750 760 770 780 790 110 120 130 140 150 mKIAA4 DIAGFEIFDFN------SLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDF- : ::. ... :.:.:: :.....::..:... :. : :.::...:: .: :. mKIAA0 DTPGFQNPEWGGSARGASFEELCHNYAQDRLQRLFHERTFLQELERYKEDNIELAFDDLE 800 810 820 830 840 850 160 170 180 190 200 mKIAA4 --GMDLAACIE----LI------EKPLGIFSILEEECMFPKATDTSFKNKLYDQHLGKSN . : .: .. :. .. :.. .:::: . : ::. .. ..:.. . . . mKIAA0 PVADDSVAAVDQASHLVRSLAHADEARGLLWLLEEEALVPGATEDALLDRLFSYYGPQEG 860 870 880 890 900 910 210 220 230 240 250 mKIAA4 NFQKPKPA-KGKAEAHFSLVHYAGT--VDYNITGWLDKNK-DPLNDTVVGLYQKSAMKTL . . .: ... :: : : :: :.::..:::. .: .: .... : : : : . mKIAA0 DKKGQSPLLRSSKPRHFLLGHSHGTNWVEYNVAGWLNYTKQNPATQNAPRLLQDSQKKII 920 930 940 950 960 970 260 270 280 290 300 310 mKIAA4 ASLFSTYA-SAEADGGAKKGAKKKGSSFQTVSALFRVKYKFRLGKKVYSVSMYYICAI ..:: : :: . .:. : mKIAA0 SNLFLGRAGSATVLSGSIAGLEGGSQLALRRATSMRKTFTTGMAAVKKKSLCIQIKLQVD 980 990 1000 1010 1020 1030 314 residues in 1 query sequences 1768703 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:05:16 2006 done: Mon Mar 27 11:05:17 2006 Scan time: 0.530 Display time: 0.130 Function used was FASTA [version 3.4t11 Apr 17, 2002]