FASTA searches a protein or DNA sequence data bank
 version 3.4t11 Apr 17, 2002
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 ../query/mFLJ00157.ptfa, 770 aa
 vs ./tmplib.26680 library

1768247 residues in  2168 sequences
  Expectation_n fit: rho(ln(x))= 5.5964+/-0.00482; mu= 10.8157+/- 0.321
 mean_var=113.3842+/-26.106, 0's: 0 Z-trim: 2  B-trim: 0 in 0/36
 Lambda= 0.1204

FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 38, opt: 26, open/ext: -10/-2, width:  16
The best scores are:                                       opt bits E(2168)
mFLJ00161  ( 265 res)   mpk00564                   ( 265)  514  100 2.5e-22


>>mFLJ00161  ( 265 res)   mpk00564                        (265 aa)
 initn: 466 init1: 275 opt: 514  Z-score: 493.2  bits: 100.5 E(): 2.5e-22
Smith-Waterman score: 514;  32.955% identity (34.800% ungapped) in 264 aa overlap (508-769:8-259)

       480       490       500       510       520       530       
mFLJ00 LCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIISLKRKYL
                                     :: :: :... .:. .... :.     . :
mFLJ00                        LRGDAVAPH-YVPYLLSAFNHQSALRSSV-----SVL
                                       10        20             30 

       540       550       560       570       580       590       
mFLJ00 KTEAEEGLCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLLGSNAVDII
         ..: .  :. : ... :: . .. :  .:: . ..:.  .. : ...:::.:. .: .
mFLJ00 LPDGEASGVLA-P-VEAALDDVQRRICRLVLEVLQVELQPLFSALPSRRWLLSSELLDGV
              40          50        60        70        80         

       600       610       620       630       640       650       
mFLJ00 CVTVEDYFNDFAKIKKPYKKRMTAEAHRRVVVEYLRAVMQKRISFRSAEERKEGAEKMVR
       :  .  . .:: ...::  . . :::.: ::..::::.:: :.  :...::...::.. .
mFLJ00 CEQTSHFCQDFWRVRKPGVQLLLAEAERTVVLQYLRALMQGRLVCRGTDERSQAAERLRQ
      90       100       110       120       130       140         

       660       670       680        690       700       710      
mFLJ00 EAEQLRFLFRKLASGFGEDADGHCDTIV-AVAEVIKLTDPSLLYLEVSTLVSKYPDIRDD
       .: ::. ::     :.: . ..::  .. :. :...: ::.:: :::. : ...::. .:
mFLJ00 DAAQLKELFL----GLGLEESAHCAPVLLALRELLNLHDPTLLGLEVAGLRQQFPDVSED
     150           160       170       180       190       200     

        720       730       740        750       760       770     
mFLJ00 HIGALLALRGDASRDMKQTIMETLEQGPMQA-SPNYVPIFKEIVVPSLNVAKLLK     
       :..::: ::::.::. .:. . .:. ::  . : .   .:. . .:. .... :      
mFLJ00 HVSALLDLRGDVSREHRQAALSSLQAGPPPSPSTGRRALFSLVPTPTPSLSSCLPSGPCS
         210       220       230       240       250       260     




770 residues in 1 query   sequences
1768247 residues in 2168 library sequences
 Scomplib [34t11]
 start: Mon Mar 27 10:07:32 2006 done: Mon Mar 27 10:07:33 2006
 Scan time:  0.900 Display time:  0.020

Function used was FASTA [version 3.4t11 Apr 17, 2002]