# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj27275.fasta.nr -Q ../query/mKIAA1892.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1892, 476 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919303 sequences Expectation_n fit: rho(ln(x))= 5.0317+/-0.000183; mu= 12.0183+/- 0.010 mean_var=68.0260+/-13.128, 0's: 42 Z-trim: 47 B-trim: 0 in 0/68 Lambda= 0.155502 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81913124|sp|Q8BGZ3.1|WD40A_MOUSE RecName: Full= ( 453) 3095 703.3 3.3e-200 gi|26354853|dbj|BAC41053.1| unnamed protein produc ( 453) 3086 701.3 1.3e-199 gi|26339711|dbj|BAB23817.2| unnamed protein produc ( 453) 3085 701.0 1.6e-199 gi|109476278|ref|XP_001059949.1| PREDICTED: simila ( 453) 3068 697.2 2.2e-198 gi|109476280|ref|XP_001059878.1| PREDICTED: simila ( 454) 3056 694.5 1.4e-197 gi|74756352|sp|Q5T6F0.1|WD40A_HUMAN RecName: Full= ( 453) 3049 693.0 4.2e-197 gi|39645639|gb|AAH63823.1| WD repeat domain 40A [H ( 453) 3043 691.6 1.1e-196 gi|73971142|ref|XP_538706.2| PREDICTED: similar to ( 453) 3039 690.7 2e-196 gi|75075386|sp|Q4R3J7.1|WD40A_MACFA WD repeat-cont ( 453) 3034 689.6 4.4e-196 gi|109111204|ref|XP_001098592.1| PREDICTED: simila ( 453) 3028 688.3 1.1e-195 gi|73971146|ref|XP_865673.1| PREDICTED: similar to ( 454) 3027 688.0 1.3e-195 gi|73971144|ref|XP_865660.1| PREDICTED: similar to ( 454) 3027 688.0 1.3e-195 gi|149737081|ref|XP_001499610.1| PREDICTED: WD rep ( 453) 3024 687.4 2.1e-195 gi|109111202|ref|XP_001098495.1| PREDICTED: simila ( 454) 3016 685.6 7.2e-195 gi|158706501|sp|Q3MHH0.2|WD40A_BOVIN RecName: Full ( 453) 3005 683.1 4e-194 gi|75948203|gb|AAI05242.1| WDR40A protein [Bos tau ( 452) 2994 680.6 2.2e-193 gi|109476282|ref|XP_001059812.1| PREDICTED: simila ( 447) 2920 664.0 2.2e-188 gi|114624158|ref|XP_520537.2| PREDICTED: WD repeat ( 457) 2908 661.3 1.4e-187 gi|119578878|gb|EAW58474.1| WD repeat domain 40A, ( 435) 2906 660.9 1.9e-187 gi|114624164|ref|XP_001160240.1| PREDICTED: WD rep ( 453) 2897 658.9 7.8e-187 gi|109111200|ref|XP_001098198.1| PREDICTED: simila ( 435) 2886 656.4 4.2e-186 gi|109111206|ref|XP_001098404.1| PREDICTED: simila ( 432) 2878 654.6 1.4e-185 gi|34782819|gb|AAH08893.2| WDR40A protein [Homo sa ( 421) 2839 645.8 6.1e-183 gi|114624160|ref|XP_001160142.1| PREDICTED: WD rep ( 478) 2766 629.5 5.7e-178 gi|114624162|ref|XP_001160191.1| PREDICTED: WD rep ( 433) 2752 626.3 4.7e-177 gi|82237556|sp|Q6P809.1|WD40A_XENTR RecName: Full= ( 446) 2452 559.0 8.7e-157 gi|82234085|sp|Q63ZP7.1|W40AA_XENLA RecName: Full= ( 446) 2445 557.5 2.6e-156 gi|82231202|sp|Q5F3R7.1|WD40A_CHICK RecName: Full= ( 427) 2404 548.3 1.5e-153 gi|82235576|sp|Q6AX81.1|W40AB_XENLA WD repeat-cont ( 442) 2353 536.8 4.2e-150 gi|26352556|dbj|BAC39908.1| unnamed protein produc ( 338) 2310 527.1 2.7e-147 gi|224090137|ref|XP_002189366.1| PREDICTED: hypoth ( 415) 2139 488.8 1.1e-135 gi|109132186|ref|XP_001089560.1| PREDICTED: simila ( 463) 1968 450.5 4.4e-124 gi|74756914|sp|Q5VW00.1|WD40C_HUMAN RecName: Full= ( 463) 1951 446.6 6.1e-123 gi|74008917|ref|XP_549235.2| PREDICTED: similar to ( 578) 1949 446.3 9.9e-123 gi|81913117|sp|Q8BGW4.1|WD40C_MOUSE RecName: Full= ( 469) 1907 436.8 5.8e-120 gi|194228260|ref|XP_001915243.1| PREDICTED: WD rep ( 424) 1902 435.6 1.2e-119 gi|149060078|gb|EDM10894.1| similar to RIKEN cDNA ( 470) 1892 433.4 6e-119 gi|109512581|ref|XP_001067196.1| PREDICTED: simila ( 541) 1892 433.5 6.7e-119 gi|109510327|ref|XP_233093.4| PREDICTED: similar t ( 570) 1892 433.5 7e-119 gi|50949331|emb|CAB56028.2| hypothetical protein [ ( 275) 1880 430.6 2.5e-118 gi|74762259|sp|Q5VU92.1|WD40B_HUMAN RecName: Full= ( 463) 1850 424.0 4.1e-116 gi|119919646|ref|XP_871356.2| PREDICTED: similar t ( 477) 1850 424.0 4.2e-116 gi|23274241|gb|AAH35674.1| WD repeat domain 40B [H ( 463) 1849 423.8 4.7e-116 gi|123884285|sp|Q08BB3.1|WD40A_DANRE RecName: Full ( 482) 1820 417.3 4.4e-114 gi|149060079|gb|EDM10895.1| rCG53262 [Rattus norve ( 501) 1794 411.5 2.6e-112 gi|26338726|dbj|BAC33034.1| unnamed protein produc ( 501) 1787 409.9 7.8e-112 gi|26332647|dbj|BAC30041.1| unnamed protein produc ( 501) 1786 409.7 9.1e-112 gi|81914244|sp|Q8CBW4.1|WD40B_MOUSE RecName: Full= ( 501) 1785 409.4 1.1e-111 gi|26333455|dbj|BAC30445.1| unnamed protein produc ( 501) 1785 409.4 1.1e-111 gi|26329885|dbj|BAC28681.1| unnamed protein produc ( 502) 1785 409.4 1.1e-111 >>gi|81913124|sp|Q8BGZ3.1|WD40A_MOUSE RecName: Full=WD r (453 aa) initn: 3095 init1: 3095 opt: 3095 Z-score: 3750.6 bits: 703.3 E(): 3.3e-200 Smith-Waterman score: 3095; 99.779% identity (99.779% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK ::::::::::::::::::::::::::::::::::::: gi|819 MARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RLPPVKRSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|26354853|dbj|BAC41053.1| unnamed protein product [M (453 aa) initn: 3086 init1: 3086 opt: 3086 Z-score: 3739.7 bits: 701.3 E(): 1.3e-199 Smith-Waterman score: 3086; 99.559% identity (99.559% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK ::::::::::::::::::::::::::::::::::::: gi|263 MARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RLPPVKRSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|263 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEGRLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|26339711|dbj|BAB23817.2| unnamed protein product [M (453 aa) initn: 3085 init1: 3085 opt: 3085 Z-score: 3738.5 bits: 701.0 E(): 1.6e-199 Smith-Waterman score: 3085; 99.559% identity (99.559% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK ::::::::::::::::::::::::::::::::::::: gi|263 MARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RLPPVKRSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS :::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|263 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGPPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|109476278|ref|XP_001059949.1| PREDICTED: similar to (453 aa) initn: 3068 init1: 3068 opt: 3068 Z-score: 3717.9 bits: 697.2 E(): 2.2e-198 Smith-Waterman score: 3068; 98.455% identity (99.559% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK :::::::::::: :::::::::::::::::::::::: gi|109 MARKAVSRKRKAPASPGAGSDAQGPQFGWDHSLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: :::::::::::::::::.:::.::::::::::::::::::::::::::::::: gi|109 RLPPVKRSLVYYLKNREVRLQNETNYSRVLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|109 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTFLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LWKAENALSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS .::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|109476280|ref|XP_001059878.1| PREDICTED: similar to (454 aa) initn: 3054 init1: 1878 opt: 3056 Z-score: 3703.3 bits: 694.5 E(): 1.4e-197 Smith-Waterman score: 3056; 98.238% identity (99.339% similar) in 454 aa overlap (24-476:1-454) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK :::::::::::: :::::::::::::::::::::::: gi|109 MARKAVSRKRKAPASPGAGSDAQGPQFGWDHSLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: :::::::::::::::::.:::.::::::::::::::::::::::::::::::: gi|109 RLPPVKRSLVYYLKNREVRLQNETNYSRVLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|109 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTFLAT 100 110 120 130 140 150 190 200 210 220 230 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGD-DGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDV ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|109 GGDNPNSLAIYRLPTLDPVCVGDCDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDV 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA1 LTKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LTKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYF 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA1 HLWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCS :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HLWKAENALSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCS 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA1 RERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTT 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA1 GRGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS :.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GKGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|74756352|sp|Q5T6F0.1|WD40A_HUMAN RecName: Full=WD r (453 aa) initn: 3049 init1: 3049 opt: 3049 Z-score: 3694.9 bits: 693.0 E(): 4.2e-197 Smith-Waterman score: 3049; 98.234% identity (99.338% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK ::::.::::::: :::::::::::::::::::::::: gi|747 MARKVVSRKRKAPASPGAGSDAQGPQFGWDHSLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: :::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|747 RLPPVKRSLVYYLKNREVRLQNETSYSRVLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|747 LNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|747 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TKSDARHNVSRVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS .::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 KGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|39645639|gb|AAH63823.1| WD repeat domain 40A [Homo (453 aa) initn: 3043 init1: 3043 opt: 3043 Z-score: 3687.6 bits: 691.6 E(): 1.1e-196 Smith-Waterman score: 3043; 98.013% identity (99.338% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK ::::.::::::: :::::::::::::::::::::::: gi|396 MARKVVSRKRKAPASPGAGSDAQGPQFGWDHSLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: :::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|396 RLPPVKRSLVYYLKNREVRLQNETSYSRVLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT ::::::::::::::::::::::.::::::::::.:::::::::::::::::::::::::: gi|396 LNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDQEPGGVTQQGCGIHAIELNPSRTLLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|396 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|396 TKSDARHNVSRVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|396 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|396 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS .::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|396 KGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|73971142|ref|XP_538706.2| PREDICTED: similar to WD (453 aa) initn: 3039 init1: 3039 opt: 3039 Z-score: 3682.7 bits: 690.7 E(): 2e-196 Smith-Waterman score: 3039; 98.013% identity (99.117% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK :::::::::::: :::::::::: ::::::::::::: gi|739 MARKAVSRKRKAPASPGAGSDAQCPQFGWDHSLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: :::::::::::::::::.:::.::::::::::::::::::::::::::::::: gi|739 RLPPVKRSLVYYLKNREVRLQNETNYSRVLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|739 LNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|739 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TKSDARHNVSRVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS .::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|75075386|sp|Q4R3J7.1|WD40A_MACFA WD repeat-containi (453 aa) initn: 3034 init1: 3034 opt: 3034 Z-score: 3676.7 bits: 689.6 E(): 4.4e-196 Smith-Waterman score: 3034; 97.792% identity (99.117% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK :::::::::::: ::::::::::: ::::::.::::: gi|750 MARKAVSRKRKAPASPGAGSDAQGQQFGWDHTLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: :::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|750 RLPPVKRSLVYYLKNREVRLQNETSYSRVLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|750 LNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|750 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::::: :::::::::::::::::::::::::::::::::.::::::::::::::: gi|750 TKSDARHNVSRVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNSKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS .::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 KGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 >>gi|109111204|ref|XP_001098592.1| PREDICTED: similar to (453 aa) initn: 3028 init1: 3028 opt: 3028 Z-score: 3669.4 bits: 688.3 E(): 1.1e-195 Smith-Waterman score: 3028; 97.572% identity (99.117% similar) in 453 aa overlap (24-476:1-453) 10 20 30 40 50 60 mKIAA1 PVALPPLAFSASCGCGATAALPTMARKAVSRKRKASASPGAGSDAQGPQFGWDHSLHKRK :::::::::::: ::::::::::: ::::::.::::: gi|109 MARKAVSRKRKAPASPGAGSDAQGQQFGWDHTLHKRK 10 20 30 70 80 90 100 110 120 mKIAA1 RLPPVKSSLVYYLKNREVRLQNETSYSRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQW :::::: :::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|109 RLPPVKRSLVYYLKNREVRLQNETSYSRVLHGYAAQQLPSLLKEREFHLGTLNKVFASQW 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|109 LNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLAT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWINDTMAVSGSRDGSMGLWEVTDDVL ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|109 GGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 TKSDARHNVSPVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFH :::::::.:: :::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 TKSDARHSVSRVPVYAHITHKALKDIPKEDTNPDNCKVRALAFNSKNKELGAVSLDGYFH 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG 340 350 360 370 380 390 430 440 450 460 470 mKIAA1 RGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS .::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 400 410 420 430 440 450 476 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 07:25:00 2009 done: Mon Mar 16 07:31:52 2009 Total Scan time: 926.300 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]